Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1259530 | XP_013457854.1 | 96.795 | 312 | 4 | 3 | 70 | 380 | 1 | 307 | 0.0 | 609 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1259530 | sp|Q86A88|DYL_DICDI | 50.602 | 83 | 38 | 2 | 293 | 375 | 12 | 91 | 2.94e-20 | 87.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1259530 | A0A072V1C9 | 96.795 | 312 | 4 | 3 | 70 | 380 | 1 | 307 | 0.0 | 609 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010490 | Msa1259530 | 0.824357 | 8.433398e-54 | -8.615850e-47 |
| Msa0010500 | Msa1259530 | 0.811044 | 8.523976e-51 | -8.615850e-47 |
| Msa0015090 | Msa1259530 | 0.806398 | 8.389021e-50 | -8.615850e-47 |
| Msa0017320 | Msa1259530 | 0.851945 | 6.373523e-61 | -8.615850e-47 |
| Msa0038870 | Msa1259530 | 0.817952 | 2.525214e-52 | -8.615850e-47 |
| Msa0049750 | Msa1259530 | 0.803227 | 3.854124e-49 | -8.615850e-47 |
| Msa0052860 | Msa1259530 | 0.809910 | 1.498314e-50 | -8.615850e-47 |
| Msa0065650 | Msa1259530 | 0.834371 | 3.115421e-56 | -8.615850e-47 |
| Msa0086420 | Msa1259530 | 0.800057 | 1.722538e-48 | -8.615850e-47 |
| Msa0095360 | Msa1259530 | 0.815059 | 1.122404e-51 | -8.615850e-47 |
| Msa0095770 | Msa1259530 | 0.807332 | 5.322949e-50 | -8.615850e-47 |
| Msa0096700 | Msa1259530 | 0.819721 | 1.000740e-52 | -8.615850e-47 |
| Msa0098990 | Msa1259530 | 0.803347 | 3.640418e-49 | -8.615850e-47 |
| Msa0111080 | Msa1259530 | 0.825639 | 4.201768e-54 | -8.615850e-47 |
| Msa0115190 | Msa1259530 | 0.804510 | 2.087164e-49 | -8.615850e-47 |
| Msa0115460 | Msa1259530 | 0.800910 | 1.154667e-48 | -8.615850e-47 |
| Msa0118540 | Msa1259530 | 0.818867 | 1.566205e-52 | -8.615850e-47 |
| Msa0608710 | Msa1259530 | 0.806330 | 8.670554e-50 | -8.615850e-47 |
| Msa0610130 | Msa1259530 | 0.804436 | 2.162008e-49 | -8.615850e-47 |
| Msa0626940 | Msa1259530 | 0.831425 | 1.681154e-55 | -8.615850e-47 |
| Msa0626990 | Msa1259530 | 0.814150 | 1.783782e-51 | -8.615850e-47 |
| Msa0627350 | Msa1259530 | 0.811959 | 5.393183e-51 | -8.615850e-47 |
| Msa0628290 | Msa1259530 | 0.804097 | 2.543387e-49 | -8.615850e-47 |
| Msa0643320 | Msa1259530 | 0.803773 | 2.970763e-49 | -8.615850e-47 |
| Msa0654620 | Msa1259530 | 0.830723 | 2.501384e-55 | -8.615850e-47 |
| Msa0665080 | Msa1259530 | 0.823616 | 1.258761e-53 | -8.615850e-47 |
| Msa0679550 | Msa1259530 | 0.838011 | 3.704815e-57 | -8.615850e-47 |
| Msa0679810 | Msa1259530 | 0.816518 | 5.306501e-52 | -8.615850e-47 |
| Msa0683140 | Msa1259530 | 0.813673 | 2.271869e-51 | -8.615850e-47 |
| Msa0698410 | Msa1259530 | 0.804811 | 1.806066e-49 | -8.615850e-47 |
| Msa0701100 | Msa1259530 | 0.819517 | 1.114413e-52 | -8.615850e-47 |
| Msa0703910 | Msa1259530 | 0.810596 | 1.065545e-50 | -8.615850e-47 |
| Msa0705990 | Msa1259530 | 0.808306 | 3.304601e-50 | -8.615850e-47 |
| Msa0736570 | Msa1259530 | 0.807005 | 6.244544e-50 | -8.615850e-47 |
| Msa0742150 | Msa1259530 | 0.809766 | 1.608469e-50 | -8.615850e-47 |
| Msa0746170 | Msa1259530 | 0.800846 | 1.189996e-48 | -8.615850e-47 |
| Msa0746210 | Msa1259530 | 0.802419 | 5.661123e-49 | -8.615850e-47 |
| Msa0750850 | Msa1259530 | 0.842530 | 2.444388e-58 | -8.615850e-47 |
| Msa0775560 | Msa1259530 | 0.836224 | 1.060728e-56 | -8.615850e-47 |
| Msa0786070 | Msa1259530 | 0.800918 | 1.150288e-48 | -8.615850e-47 |
| Msa0801730 | Msa1259530 | 0.806524 | 7.890164e-50 | -8.615850e-47 |
| Msa0805920 | Msa1259530 | 0.809446 | 1.884578e-50 | -8.615850e-47 |
| Msa0825120 | Msa1259530 | 0.806052 | 9.921601e-50 | -8.615850e-47 |
| Msa0130520 | Msa1259530 | 0.806353 | 8.570448e-50 | -8.615850e-47 |
| Msa0138020 | Msa1259530 | 0.819065 | 1.412195e-52 | -8.615850e-47 |
| Msa0142500 | Msa1259530 | 0.832268 | 1.041677e-55 | -8.615850e-47 |
| Msa0154920 | Msa1259530 | 0.834395 | 3.072186e-56 | -8.615850e-47 |
| Msa0155340 | Msa1259530 | 0.805482 | 1.306636e-49 | -8.615850e-47 |
| Msa0175200 | Msa1259530 | 0.802045 | 6.759073e-49 | -8.615850e-47 |
| Msa0187490 | Msa1259530 | 0.840511 | 8.320216e-58 | -8.615850e-47 |
| Msa0189030 | Msa1259530 | 0.830533 | 2.784477e-55 | -8.615850e-47 |
| Msa0196670 | Msa1259530 | 0.824903 | 6.272735e-54 | -8.615850e-47 |
| Msa0197610 | Msa1259530 | 0.806165 | 9.392911e-50 | -8.615850e-47 |
| Msa1229610 | Msa1259530 | 0.807646 | 4.566811e-50 | -8.615850e-47 |
| Msa1235400 | Msa1259530 | 0.800326 | 1.519136e-48 | -8.615850e-47 |
| Msa1240970 | Msa1259530 | 0.804131 | 2.503349e-49 | -8.615850e-47 |
| Msa1250110 | Msa1259530 | 0.831906 | 1.279733e-55 | -8.615850e-47 |
| Msa1250730 | Msa1259530 | 0.825376 | 4.848178e-54 | -8.615850e-47 |
| Msa1259530 | Msa1270660 | 0.843201 | 1.620355e-58 | -8.615850e-47 |
| Msa1259530 | Msa1270730 | 0.816543 | 5.237368e-52 | -8.615850e-47 |
| Msa1259530 | Msa1272320 | 0.806503 | 7.968934e-50 | -8.615850e-47 |
| Msa1259530 | Msa1276510 | 0.805221 | 1.482057e-49 | -8.615850e-47 |
| Msa1259530 | Msa1295330 | 0.804930 | 1.705028e-49 | -8.615850e-47 |
| Msa1259530 | Msa1299250 | 0.865999 | 3.928392e-65 | -8.615850e-47 |
| Msa1259530 | Msa1307180 | 0.843360 | 1.469937e-58 | -8.615850e-47 |
| Msa1259530 | Msa1314770 | 0.802526 | 5.380709e-49 | -8.615850e-47 |
| Msa1259530 | Msa1316360 | 0.848049 | 7.850103e-60 | -8.615850e-47 |
| Msa1259530 | Msa1322200 | 0.803141 | 4.016037e-49 | -8.615850e-47 |
| Msa1259530 | Msa1325430 | 0.821418 | 4.081714e-53 | -8.615850e-47 |
| Msa1259530 | Msa1331350 | 0.825641 | 4.196590e-54 | -8.615850e-47 |
| Msa1259530 | Msa1335230 | 0.816387 | 5.675977e-52 | -8.615850e-47 |
| Msa1259530 | Msa1355890 | 0.841598 | 4.312433e-58 | -8.615850e-47 |
| Msa1259530 | Msa1360220 | 0.861749 | 8.241151e-64 | -8.615850e-47 |
| Msa1259530 | Msa1362090 | 0.802554 | 5.310396e-49 | -8.615850e-47 |
| Msa1259530 | Msa1371240 | 0.820218 | 7.705550e-53 | -8.615850e-47 |
| Msa1259530 | Msa1372290 | 0.818695 | 1.714080e-52 | -8.615850e-47 |
| Msa1259530 | Msa1382020 | 0.816513 | 5.320633e-52 | -8.615850e-47 |
| Msa1259530 | Msa1388860 | 0.811288 | 7.546000e-51 | -8.615850e-47 |
| Msa1259530 | Msa1396400 | -0.812292 | 4.562955e-51 | -8.615850e-47 |
| Msa1259530 | Msa1407470 | 0.806675 | 7.332437e-50 | -8.615850e-47 |
| Msa1259530 | Msa1409740 | 0.803576 | 3.263180e-49 | -8.615850e-47 |
| Msa1259530 | Msa1421210 | 0.803445 | 3.474322e-49 | -8.615850e-47 |
| Msa1259530 | Msa1423820 | 0.801310 | 9.565669e-49 | -8.615850e-47 |
| Msa1259530 | Msa1428780 | 0.818431 | 1.967026e-52 | -8.615850e-47 |
| Msa1259530 | Msa1436600 | 0.803170 | 3.961533e-49 | -8.615850e-47 |
| Msa1259530 | Msa1438840 | 0.826995 | 1.997666e-54 | -8.615850e-47 |
| Msa1259530 | Msa1460750 | 0.800708 | 1.269565e-48 | -8.615850e-47 |
| Msa1259530 | Msa1463600 | 0.825814 | 3.817684e-54 | -8.615850e-47 |
| Msa0385490 | Msa1259530 | 0.815350 | 9.671924e-52 | -8.615850e-47 |
| Msa0427580 | Msa1259530 | 0.816396 | 5.649921e-52 | -8.615850e-47 |
| Msa0467220 | Msa1259530 | 0.806793 | 6.922132e-50 | -8.615850e-47 |
| Msa0481030 | Msa1259530 | 0.808011 | 3.819118e-50 | -8.615850e-47 |
| Msa0482180 | Msa1259530 | 0.800488 | 1.407685e-48 | -8.615850e-47 |
| Msa0980020 | Msa1259530 | 0.844577 | 6.937441e-59 | -8.615850e-47 |
| Msa0992580 | Msa1259530 | 0.801163 | 1.024901e-48 | -8.615850e-47 |
| Msa0992600 | Msa1259530 | 0.808231 | 3.427873e-50 | -8.615850e-47 |
| Msa0993240 | Msa1259530 | 0.805733 | 1.157613e-49 | -8.615850e-47 |
| Msa0994370 | Msa1259530 | 0.826385 | 2.792977e-54 | -8.615850e-47 |
| Msa1006730 | Msa1259530 | 0.803067 | 4.159848e-49 | -8.615850e-47 |
| Msa1026410 | Msa1259530 | 0.811969 | 5.364916e-51 | -8.615850e-47 |
| Msa1042660 | Msa1259530 | 0.824458 | 7.983905e-54 | -8.615850e-47 |
| Msa1071320 | Msa1259530 | 0.864563 | 1.111287e-64 | -8.615850e-47 |
| Msa1081790 | Msa1259530 | -0.813729 | 2.208936e-51 | -8.615850e-47 |
| Msa1088290 | Msa1259530 | 0.808634 | 2.812140e-50 | -8.615850e-47 |
| Msa1093100 | Msa1259530 | 0.814847 | 1.250506e-51 | -8.615850e-47 |
| Msa0262370 | Msa1259530 | 0.803988 | 2.679917e-49 | -8.615850e-47 |
| Msa0271790 | Msa1259530 | 0.815506 | 8.928310e-52 | -8.615850e-47 |
| Msa0307560 | Msa1259530 | 0.808426 | 3.115922e-50 | -8.615850e-47 |
| Msa0309270 | Msa1259530 | 0.809289 | 2.036811e-50 | -8.615850e-47 |
| Msa0310430 | Msa1259530 | 0.810103 | 1.361391e-50 | -8.615850e-47 |
| Msa0311720 | Msa1259530 | 0.805118 | 1.557697e-49 | -8.615850e-47 |
| Msa0324240 | Msa1259530 | 0.805891 | 1.072248e-49 | -8.615850e-47 |
| Msa0341890 | Msa1259530 | 0.810786 | 9.691861e-51 | -8.615850e-47 |
| Msa0347750 | Msa1259530 | 0.808859 | 2.518360e-50 | -8.615850e-47 |
| Msa1107200 | Msa1259530 | 0.820225 | 7.674579e-53 | -8.615850e-47 |
| Msa1163870 | Msa1259530 | 0.817661 | 2.937445e-52 | -8.615850e-47 |
| Msa1166090 | Msa1259530 | -0.814629 | 1.397515e-51 | -8.615850e-47 |
| Msa1176360 | Msa1259530 | 0.822313 | 2.532645e-53 | -8.615850e-47 |
| Msa1197070 | Msa1259530 | 0.809040 | 2.302593e-50 | -8.615850e-47 |
| Msa1207310 | Msa1259530 | 0.823810 | 1.133759e-53 | -8.615850e-47 |
| Msa1208380 | Msa1259530 | 0.823245 | 1.536401e-53 | -8.615850e-47 |
| Msa1210690 | Msa1259530 | 0.836816 | 7.496607e-57 | -8.615850e-47 |
| Msa1218580 | Msa1259530 | 0.801961 | 7.031107e-49 | -8.615850e-47 |
| Msa0518170 | Msa1259530 | 0.816660 | 4.932746e-52 | -8.615850e-47 |
| Msa0530650 | Msa1259530 | 0.815389 | 9.481574e-52 | -8.615850e-47 |
| Msa0534410 | Msa1259530 | 0.801124 | 1.043770e-48 | -8.615850e-47 |
| Msa0542560 | Msa1259530 | 0.800492 | 1.405192e-48 | -8.615850e-47 |
| Msa0545290 | Msa1259530 | 0.817617 | 3.005815e-52 | -8.615850e-47 |
| Msa0549780 | Msa1259530 | 0.803890 | 2.809304e-49 | -8.615850e-47 |
| Msa0555640 | Msa1259530 | 0.813328 | 2.706125e-51 | -8.615850e-47 |
| Msa0569780 | Msa1259530 | 0.809647 | 1.706538e-50 | -8.615850e-47 |
| Msa0587190 | Msa1259530 | 0.822700 | 2.059311e-53 | -8.615850e-47 |
| Msa0588240 | Msa1259530 | 0.832749 | 7.914442e-56 | -8.615850e-47 |
| Msa0600890 | Msa1259530 | 0.818709 | 1.701672e-52 | -8.615850e-47 |
| Msa0602370 | Msa1259530 | 0.805745 | 1.150781e-49 | -8.615850e-47 |
| Msa0844110 | Msa1259530 | 0.803445 | 3.473741e-49 | -8.615850e-47 |
| Msa0847470 | Msa1259530 | 0.812788 | 3.554338e-51 | -8.615850e-47 |
| Msa0853440 | Msa1259530 | 0.801651 | 8.141067e-49 | -8.615850e-47 |
| Msa0861470 | Msa1259530 | 0.858229 | 9.506251e-63 | -8.615850e-47 |
| Msa0861570 | Msa1259530 | 0.861681 | 8.645361e-64 | -8.615850e-47 |
| Msa0869120 | Msa1259530 | 0.809925 | 1.487132e-50 | -8.615850e-47 |
| Msa0901320 | Msa1259530 | 0.830201 | 3.355102e-55 | -8.615850e-47 |
| Msa0933290 | Msa1259530 | 0.801603 | 8.327677e-49 | -8.615850e-47 |
| Msa0958920 | Msa1259530 | 0.804224 | 2.394000e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1259530 | MtrunA17_Chr4g0059791 | 96.795 | 312 | 4 | 3 | 70 | 380 | 1 | 307 | 0.0 | 609 |
| Msa1259530 | MtrunA17_Chr4g0063491 | 65.934 | 91 | 30 | 1 | 289 | 379 | 154 | 243 | 5.46e-38 | 137 |
| Msa1259530 | MtrunA17_Chr8g0391451 | 62.626 | 99 | 34 | 2 | 284 | 380 | 49 | 146 | 2.83e-36 | 129 |
| Msa1259530 | MtrunA17_Chr4g0067531 | 52.439 | 82 | 36 | 2 | 293 | 374 | 51 | 129 | 2.57e-20 | 85.9 |
| Msa1259530 | MtrunA17_Chr2g0331651 | 46.067 | 89 | 46 | 2 | 286 | 373 | 2 | 89 | 7.19e-20 | 83.6 |
| Msa1259530 | MtrunA17_Chr8g0360861 | 50.633 | 79 | 38 | 1 | 295 | 373 | 12 | 89 | 1.48e-17 | 77.8 |
| Msa1259530 | MtrunA17_Chr6g0485891 | 44.444 | 81 | 44 | 1 | 295 | 375 | 46 | 125 | 1.05e-15 | 73.2 |
| Msa1259530 | MtrunA17_Chr1g0160981 | 45.946 | 74 | 38 | 1 | 287 | 358 | 51 | 124 | 3.40e-13 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1259530 | AT5G20110.1 | 54.918 | 122 | 48 | 2 | 264 | 379 | 86 | 206 | 2.65e-38 | 137 |
| Msa1259530 | AT1G23220.1 | 53.763 | 93 | 41 | 2 | 289 | 380 | 36 | 127 | 1.56e-26 | 103 |
| Msa1259530 | AT1G52245.1 | 46.154 | 91 | 47 | 2 | 286 | 375 | 2 | 91 | 1.17e-18 | 80.9 |
| Msa1259530 | AT3G16120.2 | 47.126 | 87 | 45 | 1 | 289 | 375 | 6 | 91 | 1.77e-18 | 80.1 |
| Msa1259530 | AT3G16120.1 | 47.126 | 87 | 45 | 1 | 289 | 375 | 6 | 91 | 1.77e-18 | 80.1 |
| Msa1259530 | AT4G15930.1 | 47.727 | 88 | 41 | 3 | 289 | 375 | 40 | 123 | 3.87e-16 | 74.7 |
| Msa1259530 | AT4G27360.1 | 46.591 | 88 | 46 | 1 | 289 | 376 | 6 | 92 | 6.27e-16 | 73.6 |
Find 115 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGAGGTGGTTTCTCTTTA+AGG | 0.077615 | 8_2:+61213168 | None:intergenic |
| CAAATTTGATTTCAGTTAAA+TGG | 0.124006 | 8_2:+61211580 | None:intergenic |
| GGTGATTTCTTTGCAATTAA+TGG | 0.142399 | 8_2:-61212930 | Msa1259530:CDS |
| TTGAAGGAAGGTGGTGAATT+TGG | 0.212017 | 8_2:-61211974 | Msa1259530:exon |
| ATCAAATCTTGGTTTGGTTT+TGG | 0.235547 | 8_2:+61213428 | None:intergenic |
| TGTATTGTGGGGACTAGTTT+TGG | 0.238004 | 8_2:-61212093 | Msa1259530:CDS |
| GTACAGCAGTCTTAAATATA+AGG | 0.257882 | 8_2:+61212007 | None:intergenic |
| GGAGAGAGTTTCTGTTTCTA+TGG | 0.258173 | 8_2:-61213015 | Msa1259530:CDS |
| TTGAGGTGGTTTCTCTTTAA+GGG | 0.259606 | 8_2:+61213169 | None:intergenic |
| TGTGGGTCAATGATTGATTT+AGG | 0.289700 | 8_2:-61212951 | Msa1259530:CDS |
| GAGGGATAATGCTAGGGTTT+TGG | 0.302500 | 8_2:+61212812 | None:intergenic |
| ACACAAGTTGAGTGTTGTTT+TGG | 0.323811 | 8_2:+61213824 | None:intergenic |
| CAAAGTGGTGGTGGAGGTGG+TGG | 0.344117 | 8_2:-61212990 | Msa1259530:CDS |
| ATTGGAAAAGTGGAAACTTC+AGG | 0.346164 | 8_2:-61213132 | Msa1259530:CDS |
| ATGGTTAAAATATATTTGTT+TGG | 0.352573 | 8_2:-61211448 | Msa1259530:three_prime_UTR |
| TTTGTCATAGAAAGGTAAAA+AGG | 0.362261 | 8_2:-61211914 | Msa1259530:three_prime_UTR |
| TGTTTGGTGGGTGTTGTTGT+TGG | 0.366216 | 8_2:+61213253 | None:intergenic |
| CAAACGTGAGTCAACATGTT+TGG | 0.366632 | 8_2:+61213322 | None:intergenic |
| GGTCAAAGTGGTGGTGGAGG+TGG | 0.389013 | 8_2:-61212993 | Msa1259530:CDS |
| TTAGTGCATGTTTAATTTGA+CGG | 0.394063 | 8_2:+61211717 | None:intergenic |
| GTGGAGAAAGATAGAAGAAA+AGG | 0.396037 | 8_2:+61213665 | None:intergenic |
| GTTTGGTGGGTGTTGTTGTT+GGG | 0.396439 | 8_2:+61213254 | None:intergenic |
| GAAATATTGCAGGAATTTGA+TGG | 0.396694 | 8_2:-61212138 | Msa1259530:intron |
| TAGAAAGTGGTAAAGTGTAT+TGG | 0.402477 | 8_2:+61213698 | None:intergenic |
| CGCCAAGGGGTGTGTGTGTT+GGG | 0.404458 | 8_2:+61213857 | None:intergenic |
| AGAAAGTGGTAAAGTGTATT+GGG | 0.405132 | 8_2:+61213699 | None:intergenic |
| ACAGAAGATGAAACGAATTT+CGG | 0.408803 | 8_2:-61211943 | Msa1259530:three_prime_UTR |
| AAAGGTGGTTGAGGATGTTA+AGG | 0.409778 | 8_2:-61213090 | Msa1259530:CDS |
| AAAAGAAGGTGGTGATGTTA+AGG | 0.409989 | 8_2:-61213036 | Msa1259530:CDS |
| TTAGCTTATATAATTTCATA+TGG | 0.416274 | 8_2:-61211467 | Msa1259530:three_prime_UTR |
| ATCATGATAAGACAAACAAA+GGG | 0.417190 | 8_2:+61211837 | None:intergenic |
| GATTGTACAATAATTAGAAC+TGG | 0.418704 | 8_2:-61211558 | Msa1259530:three_prime_UTR |
| CAGGAATTTGATGGGGTGTA+TGG | 0.421928 | 8_2:-61212129 | Msa1259530:CDS |
| GGTATAGATTTGTCATAGAA+AGG | 0.426753 | 8_2:-61211922 | Msa1259530:three_prime_UTR |
| GCTTGAATCAAATCTTGGTT+TGG | 0.433215 | 8_2:+61213422 | None:intergenic |
| TAGTAGCTTGAATCAAATCT+TGG | 0.435025 | 8_2:+61213417 | None:intergenic |
| TATGAAGGCTATGTAACTAA+TGG | 0.444710 | 8_2:-61211677 | Msa1259530:three_prime_UTR |
| GTTGTTGAAGAATGAGAAAA+AGG | 0.446134 | 8_2:-61213108 | Msa1259530:CDS |
| TTTGGTTTGAGAATGTTGTT+TGG | 0.446853 | 8_2:+61213340 | None:intergenic |
| CCGGCGAAACACGGCACCAC+CGG | 0.446993 | 8_2:-61213543 | Msa1259530:CDS |
| TTGGAAAAGTGGAAACTTCA+GGG | 0.459465 | 8_2:-61213131 | Msa1259530:CDS |
| ATGGGTCAAAGTGGTGGTGG+AGG | 0.467355 | 8_2:-61212996 | Msa1259530:CDS |
| GCGCCAAGGGGTGTGTGTGT+TGG | 0.469937 | 8_2:+61213856 | None:intergenic |
| AGGATTTCTATATTTCTCAA+TGG | 0.472685 | 8_2:-61212046 | Msa1259530:CDS |
| ACATTGCTGTATTGTAGCAT+TGG | 0.475963 | 8_2:-61211764 | Msa1259530:three_prime_UTR |
| CCTTCTTGAGGGATAATGCT+AGG | 0.479039 | 8_2:+61212805 | None:intergenic |
| TTTGTGACCCATTCTGTTGG+AGG | 0.480594 | 8_2:-61212066 | Msa1259530:CDS |
| TGGTGCCGTGTTTCGCCGGC+GGG | 0.480858 | 8_2:+61213547 | None:intergenic |
| ACAGCATGGATCTGCATAAA+CGG | 0.483580 | 8_2:+61212879 | None:intergenic |
| TATGAATTATACCTTCTTGA+GGG | 0.489208 | 8_2:+61212794 | None:intergenic |
| TTTGGTTGCTTAGCTAAAGC+AGG | 0.490079 | 8_2:+61213506 | None:intergenic |
| TCATTTGTGACCCATTCTGT+TGG | 0.494391 | 8_2:-61212069 | Msa1259530:CDS |
| CTTCTTGAGGGATAATGCTA+GGG | 0.494928 | 8_2:+61212806 | None:intergenic |
| CCGGTGGTGCCGTGTTTCGC+CGG | 0.500458 | 8_2:+61213543 | None:intergenic |
| AGACTTACTTGAAGATATGA+AGG | 0.504395 | 8_2:-61211692 | Msa1259530:three_prime_UTR |
| TAAACTGCAACATCTGTGAC+TGG | 0.504532 | 8_2:+61211524 | None:intergenic |
| CCAGCATGGCACTGTATTGT+GGG | 0.504817 | 8_2:-61212105 | Msa1259530:CDS |
| TAGAAATCCTCCAACAGAAT+GGG | 0.505407 | 8_2:+61212059 | None:intergenic |
| GAGAGAGTTTCTGTTTCTAT+GGG | 0.506756 | 8_2:-61213014 | Msa1259530:CDS |
| TGCTTAGCTAAAGCAGGAGG+TGG | 0.509007 | 8_2:+61213512 | None:intergenic |
| GGGATATGACACATGAATGT+AGG | 0.509486 | 8_2:+61213877 | None:intergenic |
| CCTAAGTTAAGACTTTGAAA+AGG | 0.512023 | 8_2:+61213374 | None:intergenic |
| CTAGTTCAGAATTGGAAAAG+TGG | 0.512540 | 8_2:-61213142 | Msa1259530:CDS |
| CATGTTGACTCACGTTTGCA+AGG | 0.516215 | 8_2:-61213317 | Msa1259530:CDS |
| TAGAAACATCCTTTGTACAT+TGG | 0.518235 | 8_2:-61211884 | Msa1259530:three_prime_UTR |
| TGGAGAAAGATAGAAGAAAA+GGG | 0.519020 | 8_2:+61213666 | None:intergenic |
| TGTTTCGCCGGCGGGAAGAA+CGG | 0.519846 | 8_2:+61213555 | None:intergenic |
| AAATATTGCAGGAATTTGAT+GGG | 0.521597 | 8_2:-61212137 | Msa1259530:intron |
| ATGATTCTAACCATGCACTT+AGG | 0.523566 | 8_2:+61211805 | None:intergenic |
| GGTAGAAGAAAATCGTTATG+TGG | 0.525728 | 8_2:-61212969 | Msa1259530:CDS |
| ATCCCAACACACACACCCCT+TGG | 0.528878 | 8_2:-61213859 | Msa1259530:five_prime_UTR |
| TCTATGGGTCAAAGTGGTGG+TGG | 0.530770 | 8_2:-61212999 | Msa1259530:CDS |
| GGGGAAAGAACATGGAGAAG+AGG | 0.532950 | 8_2:+61213743 | None:intergenic |
| CCCACAATACAGTGCCATGC+TGG | 0.538117 | 8_2:+61212105 | None:intergenic |
| AATCATGATAAGACAAACAA+AGG | 0.539853 | 8_2:+61211836 | None:intergenic |
| ATATGAATTATACCTTCTTG+AGG | 0.545883 | 8_2:+61212793 | None:intergenic |
| GGATATGACACATGAATGTA+GGG | 0.546914 | 8_2:+61213878 | None:intergenic |
| ATAGAAATCCTCCAACAGAA+TGG | 0.547634 | 8_2:+61212058 | None:intergenic |
| AGGGTTATAGAAGTAGAAAG+TGG | 0.550364 | 8_2:+61213685 | None:intergenic |
| AAATATAGCTGAGGTTGTCA+TGG | 0.552151 | 8_2:+61213289 | None:intergenic |
| GCAGGAGGTGGATTTGTCTC+CGG | 0.556923 | 8_2:+61213524 | None:intergenic |
| TTCTTCCCGCCGGCGAAACA+CGG | 0.557264 | 8_2:-61213552 | Msa1259530:CDS |
| GTGGTGCCGTGTTTCGCCGG+CGG | 0.566812 | 8_2:+61213546 | None:intergenic |
| GCAACAATTGTGACCACCGT+TGG | 0.572684 | 8_2:+61211628 | None:intergenic |
| GTGTTGTTGGGGAAAGAACA+TGG | 0.574339 | 8_2:+61213735 | None:intergenic |
| TTCTAGCACAATCAACAGCA+TGG | 0.575374 | 8_2:+61212865 | None:intergenic |
| AAAGAACATGGAGAAGAGGA+AGG | 0.575464 | 8_2:+61213747 | None:intergenic |
| GTTTCTATGGGTCAAAGTGG+TGG | 0.577482 | 8_2:-61213002 | Msa1259530:CDS |
| ACCAGCATGGCACTGTATTG+TGG | 0.577524 | 8_2:-61212106 | Msa1259530:CDS |
| CCTAGCATTATCCCTCAAGA+AGG | 0.579726 | 8_2:-61212805 | Msa1259530:intron |
| TGAAGGTGATGATGAGAAGA+TGG | 0.583761 | 8_2:+61213463 | None:intergenic |
| GTAGAAGAAAATCGTTATGT+GGG | 0.594942 | 8_2:-61212968 | Msa1259530:CDS |
| CACACGTAAGTGCTAGTCAA+AGG | 0.609844 | 8_2:-61213909 | Msa1259530:five_prime_UTR |
| TCTGTTTCTATGGGTCAAAG+TGG | 0.611585 | 8_2:-61213005 | Msa1259530:CDS |
| TGATGAATCAAATATAGCTG+AGG | 0.614815 | 8_2:+61213280 | None:intergenic |
| GGAGGTGGATTTGTCTCCGG+TGG | 0.623941 | 8_2:+61213527 | None:intergenic |
| AAACTGCAACATCTGTGACT+GGG | 0.626950 | 8_2:+61211525 | None:intergenic |
| AAAAGCAGATTGAAGGAAGG+TGG | 0.627500 | 8_2:-61211983 | Msa1259530:exon |
| TGGCACACCGTTCTTCCCGC+CGG | 0.632791 | 8_2:-61213562 | Msa1259530:CDS |
| GTAATCAACATTATATCCAA+CGG | 0.635891 | 8_2:-61211644 | Msa1259530:three_prime_UTR |
| GGTTGCTTAGCTAAAGCAGG+AGG | 0.641795 | 8_2:+61213509 | None:intergenic |
| CAGCATGGCACTGTATTGTG+GGG | 0.649093 | 8_2:-61212104 | Msa1259530:CDS |
| AAGCATAAGCCAATGTACAA+AGG | 0.654076 | 8_2:+61211875 | None:intergenic |
| TGGAAAAGTGGAAACTTCAG+GGG | 0.656471 | 8_2:-61213130 | Msa1259530:CDS |
| TTTGGATAGTGAGAAGGTGA+AGG | 0.666862 | 8_2:+61213446 | None:intergenic |
| GGTGTGCCATGTTGAATAGA+CGG | 0.676331 | 8_2:+61213576 | None:intergenic |
| TCATTAGATTGAGACTTGTG+CGG | 0.683098 | 8_2:+61213789 | None:intergenic |
| AGGTGATGATGAGAAGATGG+TGG | 0.684245 | 8_2:+61213466 | None:intergenic |
| TTTGCACCGTCTATTCAACA+TGG | 0.687135 | 8_2:-61213582 | Msa1259530:CDS |
| AATATTGCAGGAATTTGATG+GGG | 0.687792 | 8_2:-61212136 | Msa1259530:intron |
| TCATGATAAGACAAACAAAG+GGG | 0.706871 | 8_2:+61211838 | None:intergenic |
| ATCAACATTATATCCAACGG+TGG | 0.711161 | 8_2:-61211641 | Msa1259530:three_prime_UTR |
| CATGATAAGACAAACAAAGG+GGG | 0.713361 | 8_2:+61211839 | None:intergenic |
| GCATGGATCTGCATAAACGG+TGG | 0.717762 | 8_2:+61212882 | None:intergenic |
| ATGGGGTGTATGGACCAGCA+TGG | 0.734479 | 8_2:-61212119 | Msa1259530:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATGATATTTTTTGGTTTTT+GGG | + | chr8_2:61211724-61211743 | None:intergenic | 15.0% |
| !!! | TTTAGTAGTATGATATTTTT+TGG | + | chr8_2:61211732-61211751 | None:intergenic | 15.0% |
| !! | TTAGCTTATATAATTTCATA+TGG | - | chr8_2:61213881-61213900 | Msa1259530:five_prime_UTR | 15.0% |
| !! | ATGGTTAAAATATATTTGTT+TGG | - | chr8_2:61213900-61213919 | Msa1259530:five_prime_UTR | 15.0% |
| !!! | GTATGATATTTTTTGGTTTT+TGG | + | chr8_2:61211725-61211744 | None:intergenic | 20.0% |
| !!! | AGTTTTGAATGAATTGATTA+TGG | - | chr8_2:61212673-61212692 | Msa1259530:intron | 20.0% |
| !!! | ATGTAGACAAAATTTGATTT+GGG | + | chr8_2:61212901-61212920 | None:intergenic | 20.0% |
| !!! | TCAAATCATTTTGCTAAATT+TGG | + | chr8_2:61213011-61213030 | None:intergenic | 20.0% |
| !!! | TTATAATGATTTTCTTTAGG+AGG | + | chr8_2:61213082-61213101 | None:intergenic | 20.0% |
| !!! | CGTTTATAATGATTTTCTTT+AGG | + | chr8_2:61213085-61213104 | None:intergenic | 20.0% |
| !! | AAAGAAAATCATTATAAACG+TGG | - | chr8_2:61213085-61213104 | Msa1259530:CDS | 20.0% |
| !!! | TTTTGCATTAGGAATAATTT+AGG | - | chr8_2:61213113-61213132 | Msa1259530:CDS | 20.0% |
| !! | TTTGCATTAGGAATAATTTA+GGG | - | chr8_2:61213114-61213133 | Msa1259530:CDS | 20.0% |
| !!! | TGAATATTTTAGTGAATGAT+TGG | - | chr8_2:61213163-61213182 | Msa1259530:CDS | 20.0% |
| !!! | CAAATTTGATTTCAGTTAAA+TGG | + | chr8_2:61213771-61213790 | None:intergenic | 20.0% |
| !! | TTAGTACTGTGATTTTTGTT+TGG | + | chr8_2:61212114-61212133 | None:intergenic | 25.0% |
| !!! | ACACTATCTTTTTCATGATT+TGG | + | chr8_2:61212139-61212158 | None:intergenic | 25.0% |
| !!! | TAGAAAAGCTTTTGATAGTA+TGG | - | chr8_2:61212501-61212520 | Msa1259530:intron | 25.0% |
| ! | TATGAATTATACCTTCTTGA+GGG | + | chr8_2:61212557-61212576 | None:intergenic | 25.0% |
| ! | ATATGAATTATACCTTCTTG+AGG | + | chr8_2:61212558-61212577 | None:intergenic | 25.0% |
| ! | CATGTAGACAAAATTTGATT+TGG | + | chr8_2:61212902-61212921 | None:intergenic | 25.0% |
| !!! | ACTTACATTCAAGTCATTTT+GGG | + | chr8_2:61212925-61212944 | None:intergenic | 25.0% |
| !! | TCATTTTGCTAAATTTGGAT+CGG | + | chr8_2:61213006-61213025 | None:intergenic | 25.0% |
| ! | AAATATTGCAGGAATTTGAT+GGG | - | chr8_2:61213211-61213230 | Msa1259530:CDS | 25.0% |
| ! | AGGATTTCTATATTTCTCAA+TGG | - | chr8_2:61213302-61213321 | Msa1259530:CDS | 25.0% |
| ! | TTTGTCATAGAAAGGTAAAA+AGG | - | chr8_2:61213434-61213453 | Msa1259530:CDS | 25.0% |
| ! | ATCATGATAAGACAAACAAA+GGG | + | chr8_2:61213514-61213533 | None:intergenic | 25.0% |
| ! | AATCATGATAAGACAAACAA+AGG | + | chr8_2:61213515-61213534 | None:intergenic | 25.0% |
| !!! | TTAGTGCATGTTTAATTTGA+CGG | + | chr8_2:61213634-61213653 | None:intergenic | 25.0% |
| ! | GTAATCAACATTATATCCAA+CGG | - | chr8_2:61213704-61213723 | Msa1259530:CDS | 25.0% |
| ! | GATTGTACAATAATTAGAAC+TGG | - | chr8_2:61213790-61213809 | Msa1259530:exon | 25.0% |
| AGAAAGTGGTAAAGTGTATT+GGG | + | chr8_2:61211652-61211671 | None:intergenic | 30.0% | |
| TAGAAAGTGGTAAAGTGTAT+TGG | + | chr8_2:61211653-61211672 | None:intergenic | 30.0% | |
| TGGAGAAAGATAGAAGAAAA+GGG | + | chr8_2:61211685-61211704 | None:intergenic | 30.0% | |
| !!! | GATATTTTTTGGTTTTTGGG+TGG | + | chr8_2:61211721-61211740 | None:intergenic | 30.0% |
| !!! | ATCAAATCTTGGTTTGGTTT+TGG | + | chr8_2:61211923-61211942 | None:intergenic | 30.0% |
| TAGTAGCTTGAATCAAATCT+TGG | + | chr8_2:61211934-61211953 | None:intergenic | 30.0% | |
| ! | CCTAAGTTAAGACTTTGAAA+AGG | + | chr8_2:61211977-61211996 | None:intergenic | 30.0% |
| ! | CCTTTTCAAAGTCTTAACTT+AGG | - | chr8_2:61211974-61211993 | Msa1259530:exon | 30.0% |
| !! | TTTGGTTTGAGAATGTTGTT+TGG | + | chr8_2:61212011-61212030 | None:intergenic | 30.0% |
| TGATGAATCAAATATAGCTG+AGG | + | chr8_2:61212071-61212090 | None:intergenic | 30.0% | |
| !! | TACTGTGATTTTTGTTTGGT+GGG | + | chr8_2:61212110-61212129 | None:intergenic | 30.0% |
| !!! | GTGTTTTTTTGCATTCTAAG+AGG | - | chr8_2:61212155-61212174 | Msa1259530:intron | 30.0% |
| ! | AATTCTGAACTAGGTTTTTG+AGG | + | chr8_2:61212199-61212218 | None:intergenic | 30.0% |
| TCAAAAACCTAGTTCAGAAT+TGG | - | chr8_2:61212198-61212217 | Msa1259530:intron | 30.0% | |
| GTTGTTGAAGAATGAGAAAA+AGG | - | chr8_2:61212240-61212259 | Msa1259530:intron | 30.0% | |
| GTCAAAAAAAGTAACTGTTG+TGG | - | chr8_2:61212288-61212307 | Msa1259530:intron | 30.0% | |
| GTAGAAGAAAATCGTTATGT+GGG | - | chr8_2:61212380-61212399 | Msa1259530:intron | 30.0% | |
| GGTGATTTCTTTGCAATTAA+TGG | - | chr8_2:61212418-61212437 | Msa1259530:intron | 30.0% | |
| TGCAATTAATGGAGCAAAAA+TGG | - | chr8_2:61212429-61212448 | Msa1259530:intron | 30.0% | |
| ! | GTTAGACTTGACACTTTTAT+CGG | - | chr8_2:61212751-61212770 | Msa1259530:intron | 30.0% |
| ! | TTAGACTTGACACTTTTATC+GGG | - | chr8_2:61212752-61212771 | Msa1259530:intron | 30.0% |
| ! | CACTTACATTCAAGTCATTT+TGG | + | chr8_2:61212926-61212945 | None:intergenic | 30.0% |
| GTGTATGTTTGAATTTAGTG+TGG | - | chr8_2:61212943-61212962 | Msa1259530:CDS | 30.0% | |
| ! | ATTTTGCTAAATTTGGATCG+GGG | + | chr8_2:61213004-61213023 | None:intergenic | 30.0% |
| ! | CATTTTGCTAAATTTGGATC+GGG | + | chr8_2:61213005-61213024 | None:intergenic | 30.0% |
| ! | GAATGATTGGTCAATGAATT+CGG | - | chr8_2:61213176-61213195 | Msa1259530:CDS | 30.0% |
| GAAATATTGCAGGAATTTGA+TGG | - | chr8_2:61213210-61213229 | Msa1259530:CDS | 30.0% | |
| AATATTGCAGGAATTTGATG+GGG | - | chr8_2:61213212-61213231 | Msa1259530:CDS | 30.0% | |
| GTACAGCAGTCTTAAATATA+AGG | + | chr8_2:61213344-61213363 | None:intergenic | 30.0% | |
| ACAGAAGATGAAACGAATTT+CGG | - | chr8_2:61213405-61213424 | Msa1259530:CDS | 30.0% | |
| GGTATAGATTTGTCATAGAA+AGG | - | chr8_2:61213426-61213445 | Msa1259530:CDS | 30.0% | |
| TAGAAACATCCTTTGTACAT+TGG | - | chr8_2:61213464-61213483 | Msa1259530:CDS | 30.0% | |
| TCATGATAAGACAAACAAAG+GGG | + | chr8_2:61213513-61213532 | None:intergenic | 30.0% | |
| AGACTTACTTGAAGATATGA+AGG | - | chr8_2:61213656-61213675 | Msa1259530:CDS | 30.0% | |
| TATGAAGGCTATGTAACTAA+TGG | - | chr8_2:61213671-61213690 | Msa1259530:CDS | 30.0% | |
| GGATATGACACATGAATGTA+GGG | + | chr8_2:61211473-61211492 | None:intergenic | 35.0% | |
| !!! | ACACAAGTTGAGTGTTGTTT+TGG | + | chr8_2:61211527-61211546 | None:intergenic | 35.0% |
| TCATTAGATTGAGACTTGTG+CGG | + | chr8_2:61211562-61211581 | None:intergenic | 35.0% | |
| !!! | TAGCTTTTCTAGGTGTTGTT+GGG | + | chr8_2:61211628-61211647 | None:intergenic | 35.0% |
| !! | TTAGCTTTTCTAGGTGTTGT+TGG | + | chr8_2:61211629-61211648 | None:intergenic | 35.0% |
| !!! | TGTATTGGGTTAGCTTTTCT+AGG | + | chr8_2:61211638-61211657 | None:intergenic | 35.0% |
| AGGGTTATAGAAGTAGAAAG+TGG | + | chr8_2:61211666-61211685 | None:intergenic | 35.0% | |
| GTGGAGAAAGATAGAAGAAA+AGG | + | chr8_2:61211686-61211705 | None:intergenic | 35.0% | |
| !!! | TTTGGTTTTGGATAGTGAGA+AGG | + | chr8_2:61211911-61211930 | None:intergenic | 35.0% |
| GCTTGAATCAAATCTTGGTT+TGG | + | chr8_2:61211929-61211948 | None:intergenic | 35.0% | |
| AAATATAGCTGAGGTTGTCA+TGG | + | chr8_2:61212062-61212081 | None:intergenic | 35.0% | |
| !! | GTACTGTGATTTTTGTTTGG+TGG | + | chr8_2:61212111-61212130 | None:intergenic | 35.0% |
| TTGAGGTGGTTTCTCTTTAA+GGG | + | chr8_2:61212182-61212201 | None:intergenic | 35.0% | |
| ! | TTTGAGGTGGTTTCTCTTTA+AGG | + | chr8_2:61212183-61212202 | None:intergenic | 35.0% |
| ! | CACTTTTCCAATTCTGAACT+AGG | + | chr8_2:61212208-61212227 | None:intergenic | 35.0% |
| CTAGTTCAGAATTGGAAAAG+TGG | - | chr8_2:61212206-61212225 | Msa1259530:intron | 35.0% | |
| ATTGGAAAAGTGGAAACTTC+AGG | - | chr8_2:61212216-61212235 | Msa1259530:intron | 35.0% | |
| TTGGAAAAGTGGAAACTTCA+GGG | - | chr8_2:61212217-61212236 | Msa1259530:intron | 35.0% | |
| GTTGAAGAATGAGAAAAAGG+TGG | - | chr8_2:61212243-61212262 | Msa1259530:intron | 35.0% | |
| GTAACTGTTGTGGAAAAAGA+AGG | - | chr8_2:61212298-61212317 | Msa1259530:intron | 35.0% | |
| ! | AAAAGAAGGTGGTGATGTTA+AGG | - | chr8_2:61212312-61212331 | Msa1259530:intron | 35.0% |
| !! | GAGAGAGTTTCTGTTTCTAT+GGG | - | chr8_2:61212334-61212353 | Msa1259530:intron | 35.0% |
| GGTAGAAGAAAATCGTTATG+TGG | - | chr8_2:61212379-61212398 | Msa1259530:intron | 35.0% | |
| ! | TGTGGGTCAATGATTGATTT+AGG | - | chr8_2:61212397-61212416 | Msa1259530:intron | 35.0% |
| CCTAGTTCAATTGACAATGT+CGG | - | chr8_2:61212724-61212743 | Msa1259530:intron | 35.0% | |
| ATCTAAGGACCACTAAAACT+CGG | + | chr8_2:61212810-61212829 | None:intergenic | 35.0% | |
| ACATACGCTAAAGTCATCTA+AGG | + | chr8_2:61212825-61212844 | None:intergenic | 35.0% | |
| TATGTTGACGAGAGAATGAT+TGG | - | chr8_2:61212840-61212859 | Msa1259530:CDS | 35.0% | |
| !! | ACGTGGTTTACTTTTGCATT+AGG | - | chr8_2:61213102-61213121 | Msa1259530:CDS | 35.0% |
| TAGAAATCCTCCAACAGAAT+GGG | + | chr8_2:61213292-61213311 | None:intergenic | 35.0% | |
| ATAGAAATCCTCCAACAGAA+TGG | + | chr8_2:61213293-61213312 | None:intergenic | 35.0% | |
| CTGTACAAAAAGCAGATTGA+AGG | - | chr8_2:61213358-61213377 | Msa1259530:CDS | 35.0% | |
| ACAAAAAGCAGATTGAAGGA+AGG | - | chr8_2:61213362-61213381 | Msa1259530:CDS | 35.0% | |
| AAGCATAAGCCAATGTACAA+AGG | + | chr8_2:61213476-61213495 | None:intergenic | 35.0% | |
| CATGATAAGACAAACAAAGG+GGG | + | chr8_2:61213512-61213531 | None:intergenic | 35.0% | |
| ! | TTTTACAGAACCTAAGTGCA+TGG | - | chr8_2:61213533-61213552 | Msa1259530:CDS | 35.0% |
| ATGATTCTAACCATGCACTT+AGG | + | chr8_2:61213546-61213565 | None:intergenic | 35.0% | |
| ACATTGCTGTATTGTAGCAT+TGG | - | chr8_2:61213584-61213603 | Msa1259530:CDS | 35.0% | |
| ATCAACATTATATCCAACGG+TGG | - | chr8_2:61213707-61213726 | Msa1259530:CDS | 35.0% | |
| !! | ACACGATCAATTTTTGAGCT+CGG | - | chr8_2:61213858-61213877 | Msa1259530:five_prime_UTR | 35.0% |
| GGGATATGACACATGAATGT+AGG | + | chr8_2:61211474-61211493 | None:intergenic | 40.0% | |
| AAAGAACATGGAGAAGAGGA+AGG | + | chr8_2:61211604-61211623 | None:intergenic | 40.0% | |
| !!! | AGCTTTTCTAGGTGTTGTTG+GGG | + | chr8_2:61211627-61211646 | None:intergenic | 40.0% |
| !!! | TGGGTGGTTTTGTTTTGTTG+TGG | + | chr8_2:61211705-61211724 | None:intergenic | 40.0% |
| TTTGCACCGTCTATTCAACA+TGG | - | chr8_2:61211766-61211785 | Msa1259530:three_prime_UTR | 40.0% | |
| TTTGGTTGCTTAGCTAAAGC+AGG | + | chr8_2:61211845-61211864 | None:intergenic | 40.0% | |
| !! | TGAGAAGATGGTGGTTTTTG+TGG | + | chr8_2:61211876-61211895 | None:intergenic | 40.0% |
| ! | TGAAGGTGATGATGAGAAGA+TGG | + | chr8_2:61211888-61211907 | None:intergenic | 40.0% |
| TTTGGATAGTGAGAAGGTGA+AGG | + | chr8_2:61211905-61211924 | None:intergenic | 40.0% | |
| CAAACGTGAGTCAACATGTT+TGG | + | chr8_2:61212029-61212048 | None:intergenic | 40.0% | |
| !! | TCTGAACTAGGTTTTTGAGG+TGG | + | chr8_2:61212196-61212215 | None:intergenic | 40.0% |
| TGGAAAAGTGGAAACTTCAG+GGG | - | chr8_2:61212218-61212237 | Msa1259530:intron | 40.0% | |
| GAATGAGAAAAAGGTGGTTG+AGG | - | chr8_2:61212249-61212268 | Msa1259530:intron | 40.0% | |
| AAAGGTGGTTGAGGATGTTA+AGG | - | chr8_2:61212258-61212277 | Msa1259530:intron | 40.0% | |
| ACTGTTGTGGAAAAAGAAGG+TGG | - | chr8_2:61212301-61212320 | Msa1259530:intron | 40.0% | |
| !! | GGAGAGAGTTTCTGTTTCTA+TGG | - | chr8_2:61212333-61212352 | Msa1259530:intron | 40.0% |
| !! | TCTGTTTCTATGGGTCAAAG+TGG | - | chr8_2:61212343-61212362 | Msa1259530:intron | 40.0% |
| ACAGCATGGATCTGCATAAA+CGG | + | chr8_2:61212472-61212491 | None:intergenic | 40.0% | |
| TTCTAGCACAATCAACAGCA+TGG | + | chr8_2:61212486-61212505 | None:intergenic | 40.0% | |
| CTTCTTGAGGGATAATGCTA+GGG | + | chr8_2:61212545-61212564 | None:intergenic | 40.0% | |
| CCGACATTGTCAATTGAACT+AGG | + | chr8_2:61212727-61212746 | None:intergenic | 40.0% | |
| ! | TTTTATCGGGTTCGAACCAA+GGG | - | chr8_2:61212765-61212784 | Msa1259530:intron | 40.0% |
| GTCAATGAATTCGGTTGTGT+GGG | - | chr8_2:61213185-61213204 | Msa1259530:CDS | 40.0% | |
| ! | TGTGTGGGTTGAAATATTGC+AGG | - | chr8_2:61213200-61213219 | Msa1259530:CDS | 40.0% |
| !!! | TGTATTGTGGGGACTAGTTT+TGG | - | chr8_2:61213255-61213274 | Msa1259530:CDS | 40.0% |
| TCATTTGTGACCCATTCTGT+TGG | - | chr8_2:61213279-61213298 | Msa1259530:CDS | 40.0% | |
| AAAAGCAGATTGAAGGAAGG+TGG | - | chr8_2:61213365-61213384 | Msa1259530:CDS | 40.0% | |
| TTGAAGGAAGGTGGTGAATT+TGG | - | chr8_2:61213374-61213393 | Msa1259530:CDS | 40.0% | |
| ! | ACAAAGGGGGTGATTCATTT+TGG | + | chr8_2:61213499-61213518 | None:intergenic | 40.0% |
| AAACTGCAACATCTGTGACT+GGG | + | chr8_2:61213826-61213845 | None:intergenic | 40.0% | |
| TAAACTGCAACATCTGTGAC+TGG | + | chr8_2:61213827-61213846 | None:intergenic | 40.0% | |
| CACACGTAAGTGCTAGTCAA+AGG | - | chr8_2:61211439-61211458 | Msa1259530:three_prime_UTR | 45.0% | |
| ! | GTGTTGTTGGGGAAAGAACA+TGG | + | chr8_2:61211616-61211635 | None:intergenic | 45.0% |
| GGTGTGCCATGTTGAATAGA+CGG | + | chr8_2:61211775-61211794 | None:intergenic | 45.0% | |
| !!! | GTTTTTGTGGTGGTGGGTTT+TGG | + | chr8_2:61211863-61211882 | None:intergenic | 45.0% |
| ! | ATGGTGGTTTTTGTGGTGGT+GGG | + | chr8_2:61211869-61211888 | None:intergenic | 45.0% |
| !! | GAAGATGGTGGTTTTTGTGG+TGG | + | chr8_2:61211873-61211892 | None:intergenic | 45.0% |
| ! | AGGTGATGATGAGAAGATGG+TGG | + | chr8_2:61211885-61211904 | None:intergenic | 45.0% |
| !! | CATGTTGACTCACGTTTGCA+AGG | - | chr8_2:61212031-61212050 | Msa1259530:CDS | 45.0% |
| !! | GTTTGGTGGGTGTTGTTGTT+GGG | + | chr8_2:61212097-61212116 | None:intergenic | 45.0% |
| !! | TGTTTGGTGGGTGTTGTTGT+TGG | + | chr8_2:61212098-61212117 | None:intergenic | 45.0% |
| GTTTCTATGGGTCAAAGTGG+TGG | - | chr8_2:61212346-61212365 | Msa1259530:intron | 45.0% | |
| ! | GAGGGATAATGCTAGGGTTT+TGG | + | chr8_2:61212539-61212558 | None:intergenic | 45.0% |
| CCTTCTTGAGGGATAATGCT+AGG | + | chr8_2:61212546-61212565 | None:intergenic | 45.0% | |
| CCTAGCATTATCCCTCAAGA+AGG | - | chr8_2:61212543-61212562 | Msa1259530:intron | 45.0% | |
| ! | CTTTTATCGGGTTCGAACCA+AGG | - | chr8_2:61212764-61212783 | Msa1259530:intron | 45.0% |
| !! | TAGCTGTGTCCGAGTTTTAG+TGG | - | chr8_2:61212798-61212817 | Msa1259530:intron | 45.0% |
| GGTCAATGAATTCGGTTGTG+TGG | - | chr8_2:61213184-61213203 | Msa1259530:CDS | 45.0% | |
| CAGGAATTTGATGGGGTGTA+TGG | - | chr8_2:61213219-61213238 | Msa1259530:CDS | 45.0% | |
| TTTGTGACCCATTCTGTTGG+AGG | - | chr8_2:61213282-61213301 | Msa1259530:CDS | 45.0% | |
| !!! | TTGGTTTTGTCACGCGCCAA+GGG | + | chr8_2:61211508-61211527 | None:intergenic | 50.0% |
| !!! | TTTGGTTTTGTCACGCGCCA+AGG | + | chr8_2:61211509-61211528 | None:intergenic | 50.0% |
| GGGGAAAGAACATGGAGAAG+AGG | + | chr8_2:61211608-61211627 | None:intergenic | 50.0% | |
| TGCTTAGCTAAAGCAGGAGG+TGG | + | chr8_2:61211839-61211858 | None:intergenic | 50.0% | |
| GGTTGCTTAGCTAAAGCAGG+AGG | + | chr8_2:61211842-61211861 | None:intergenic | 50.0% | |
| !! | GATGGTGGTTTTTGTGGTGG+TGG | + | chr8_2:61211870-61211889 | None:intergenic | 50.0% |
| TCTATGGGTCAAAGTGGTGG+TGG | - | chr8_2:61212349-61212368 | Msa1259530:intron | 50.0% | |
| GCATGGATCTGCATAAACGG+TGG | + | chr8_2:61212469-61212488 | None:intergenic | 50.0% | |
| ACCAGCATGGCACTGTATTG+TGG | - | chr8_2:61213242-61213261 | Msa1259530:CDS | 50.0% | |
| CCAGCATGGCACTGTATTGT+GGG | - | chr8_2:61213243-61213262 | Msa1259530:CDS | 50.0% | |
| CAGCATGGCACTGTATTGTG+GGG | - | chr8_2:61213244-61213263 | Msa1259530:CDS | 50.0% | |
| GCAACAATTGTGACCACCGT+TGG | + | chr8_2:61213723-61213742 | None:intergenic | 50.0% | |
| ATCCCAACACACACACCCCT+TGG | - | chr8_2:61211489-61211508 | Msa1259530:three_prime_UTR | 55.0% | |
| !!! | TGGTTTTGTCACGCGCCAAG+GGG | + | chr8_2:61211507-61211526 | None:intergenic | 55.0% |
| ! | GCAGGAGGTGGATTTGTCTC+CGG | + | chr8_2:61211827-61211846 | None:intergenic | 55.0% |
| !! | ATGGGTCAAAGTGGTGGTGG+AGG | - | chr8_2:61212352-61212371 | Msa1259530:intron | 55.0% |
| ATCGGGTTCGAACCAAGGGT+AGG | - | chr8_2:61212769-61212788 | Msa1259530:intron | 55.0% | |
| TCGGGTTCGAACCAAGGGTA+GGG | - | chr8_2:61212770-61212789 | Msa1259530:intron | 55.0% | |
| CAGCTACAAGACCCTACCCT+TGG | + | chr8_2:61212784-61212803 | None:intergenic | 55.0% | |
| ATGGGGTGTATGGACCAGCA+TGG | - | chr8_2:61213229-61213248 | Msa1259530:CDS | 55.0% | |
| CCCACAATACAGTGCCATGC+TGG | + | chr8_2:61213246-61213265 | None:intergenic | 55.0% | |
| ! | CGCCAAGGGGTGTGTGTGTT+GGG | + | chr8_2:61211494-61211513 | None:intergenic | 60.0% |
| TGTTTCGCCGGCGGGAAGAA+CGG | + | chr8_2:61211796-61211815 | None:intergenic | 60.0% | |
| TTCTTCCCGCCGGCGAAACA+CGG | - | chr8_2:61211796-61211815 | Msa1259530:three_prime_UTR | 60.0% | |
| ! | GGAGGTGGATTTGTCTCCGG+TGG | + | chr8_2:61211824-61211843 | None:intergenic | 60.0% |
| !! | GGTCAAAGTGGTGGTGGAGG+TGG | - | chr8_2:61212355-61212374 | Msa1259530:intron | 60.0% |
| !! | CAAAGTGGTGGTGGAGGTGG+TGG | - | chr8_2:61212358-61212377 | Msa1259530:intron | 60.0% |
| ! | GCGCCAAGGGGTGTGTGTGT+TGG | + | chr8_2:61211495-61211514 | None:intergenic | 65.0% |
| TGGCACACCGTTCTTCCCGC+CGG | - | chr8_2:61211786-61211805 | Msa1259530:three_prime_UTR | 65.0% | |
| !! | TGGTGCCGTGTTTCGCCGGC+GGG | + | chr8_2:61211804-61211823 | None:intergenic | 70.0% |
| !! | GTGGTGCCGTGTTTCGCCGG+CGG | + | chr8_2:61211805-61211824 | None:intergenic | 70.0% |
| !! | CCGGTGGTGCCGTGTTTCGC+CGG | + | chr8_2:61211808-61211827 | None:intergenic | 70.0% |
| CCGGCGAAACACGGCACCAC+CGG | - | chr8_2:61211805-61211824 | Msa1259530:three_prime_UTR | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 61211435 | 61213935 | 61211435 | ID=Msa1259530;Name=Msa1259530 |
| chr8_2 | mRNA | 61211435 | 61213935 | 61211435 | ID=Msa1259530-mRNA-1;Parent=Msa1259530;Name=Msa1259530-mRNA-1;_AED=0.01;_eAED=0.01;_QI=143|1|1|1|1|1|2|558|380 |
| chr8_2 | exon | 61211435 | 61212148 | 61211435 | ID=Msa1259530-mRNA-1:exon:19253;Parent=Msa1259530-mRNA-1 |
| chr8_2 | exon | 61212806 | 61213935 | 61212806 | ID=Msa1259530-mRNA-1:exon:19252;Parent=Msa1259530-mRNA-1 |
| chr8_2 | five_prime_UTR | 61213793 | 61213935 | 61213793 | ID=Msa1259530-mRNA-1:five_prime_utr;Parent=Msa1259530-mRNA-1 |
| chr8_2 | CDS | 61212806 | 61213792 | 61212806 | ID=Msa1259530-mRNA-1:cds;Parent=Msa1259530-mRNA-1 |
| chr8_2 | CDS | 61211993 | 61212148 | 61211993 | ID=Msa1259530-mRNA-1:cds;Parent=Msa1259530-mRNA-1 |
| chr8_2 | three_prime_UTR | 61211435 | 61211992 | 61211435 | ID=Msa1259530-mRNA-1:three_prime_utr;Parent=Msa1259530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
