AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0965360


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0965360 MtrunA17_Chr6g0485881 94.585 831 45 0 1 831 1 831 0.0 1598
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0965360 AT3G24630.1 41.463 205 102 8 1 198 10 203 4.00e-27 118
Msa0965360 AT3G24630.2 41.463 205 102 8 1 198 10 203 4.00e-27 118

Find 162 sgRNAs with CRISPR-Local

Find 244 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTAGTGTCTTCTCTCTTTC+TGG 0.005612 6_3:-92711229 None:intergenic
TTCTGAGACTAAACTTATTT+TGG 0.076991 6_3:+92713114 Msa0965360:CDS
GAAACTTCTCAAAATATTTC+TGG 0.113763 6_3:+92709557 Msa0965360:five_prime_UTR
ATCCAATACAAGACTCTATT+TGG 0.158315 6_3:+92712925 Msa0965360:CDS
TCAATCTTTGGTAGGATCTT+AGG 0.207375 6_3:-92712890 None:intergenic
TTCAAGATTGCAAATCTCTT+TGG 0.228602 6_3:+92713033 Msa0965360:CDS
GGAACTTAAGAAAGTGATTA+AGG 0.234384 6_3:+92710874 Msa0965360:CDS
ATTGCAAAGGATTTGTTAAA+AGG 0.236779 6_3:+92710647 Msa0965360:CDS
TTTGAACACAATTCAGCTTA+TGG 0.266042 6_3:+92710830 Msa0965360:CDS
ATTCCATTAGTTTCAATCTT+TGG 0.272555 6_3:-92712902 None:intergenic
GAAAGTGATTAAGGAGAGTT+TGG 0.281612 6_3:+92710883 Msa0965360:CDS
GCAAATCTCTTTGGGAAGTT+TGG 0.283823 6_3:+92713042 Msa0965360:CDS
CCACACTCAACAACTCCTTT+TGG 0.288999 6_3:-92710380 None:intergenic
AACAGCTGAAAGAAATATAA+AGG 0.294937 6_3:+92709692 Msa0965360:five_prime_UTR
CCCTACACAAGTTAGCAATA+AGG 0.311630 6_3:-92713008 None:intergenic
GCAAGAAGCTTCGAATAGTA+TGG 0.317136 6_3:+92710712 Msa0965360:CDS
TTCACCTTGTATATATAATA+AGG 0.318783 6_3:+92713563 Msa0965360:three_prime_UTR
CTTCAGAAGTGCTTGTGCTT+TGG 0.319474 6_3:-92710922 None:intergenic
TGCAACAATAGGTTGATAAA+TGG 0.321009 6_3:+92713172 Msa0965360:CDS
CATCATCAACTGAAGAATTC+TGG 0.321444 6_3:-92712631 None:intergenic
CCTACACAAGTTAGCAATAA+GGG 0.324395 6_3:-92713007 None:intergenic
ACAATAGGTTTAGCTGCTTC+AGG 0.328588 6_3:-92711985 None:intergenic
GATTGACTTGAGCTTGTAGA+AGG 0.330319 6_3:-92710971 None:intergenic
GGTGAAGATGCTGATATCTA+AGG 0.331132 6_3:-92713546 None:intergenic
TGAACCTTCCCTTGGTTTGA+AGG 0.332725 6_3:-92711497 None:intergenic
CAAGTCAATCTTCTGTTGTT+TGG 0.332774 6_3:+92710984 Msa0965360:CDS
GAGTTTCTCAATCTTGATAT+TGG 0.338989 6_3:+92712863 Msa0965360:CDS
CGAAGCCTGTGCTCTCTAAT+AGG 0.344717 6_3:-92711298 None:intergenic
GATGAAATGCTCTTTCTAGA+TGG 0.352127 6_3:-92711862 None:intergenic
AGCTCAGAAGTGTCTTTGTC+TGG 0.357390 6_3:-92712794 None:intergenic
GTGTCACACAAAGTGGAAAA+TGG 0.360166 6_3:-92709188 None:intergenic
CTACCAAAGATTGAAACTAA+TGG 0.362800 6_3:+92712899 Msa0965360:CDS
GGATATACAGCCCTTAGTTA+TGG 0.365845 6_3:+92713334 Msa0965360:three_prime_UTR
TCAAGATTGCAAATCTCTTT+GGG 0.367770 6_3:+92713034 Msa0965360:CDS
AAACTTCTCAAAATATTTCT+GGG 0.375703 6_3:+92709558 Msa0965360:five_prime_UTR
CTCAAGATCAAGGCGAAATC+AGG 0.377524 6_3:+92711779 Msa0965360:CDS
CTTGAAACTACTCATTTCAA+TGG 0.383813 6_3:+92711259 Msa0965360:CDS
TCCATCTTCTTTGCAGCTTG+TGG 0.385624 6_3:+92710541 Msa0965360:CDS
CTTACATGATCTTGTCCTCT+TGG 0.386518 6_3:-92710186 None:intergenic
GTCTTTGTCTGGCTCGAAAT+CGG 0.387248 6_3:-92712783 None:intergenic
CAATCTTGTTGCAAGGTTGA+TGG 0.390483 6_3:+92711066 Msa0965360:CDS
TCTGTGACAGAATATTTCTA+AGG 0.402815 6_3:+92710319 Msa0965360:intron
ACAGCCCTTAGTTATGGATC+TGG 0.405068 6_3:+92713340 Msa0965360:three_prime_UTR
CACAAGCACTTCTGAAGGAT+TGG 0.417407 6_3:+92710928 Msa0965360:CDS
ATGGTCAATAAATGATTTGC+TGG 0.418671 6_3:-92712834 None:intergenic
GAAAACTCTTCTCGAGGAAC+CGG 0.426957 6_3:-92711436 None:intergenic
GTGGAAGTCTGAGGAGATAT+AGG 0.427056 6_3:+92710399 Msa0965360:CDS
GAACTATGCTTTCTTACCTT+CGG 0.429427 6_3:-92711193 None:intergenic
ACAGCAAGTGATGGTGTGTT+TGG 0.433244 6_3:-92709401 None:intergenic
GAGATATGAAGTGCAACAAT+AGG 0.438346 6_3:+92713161 Msa0965360:CDS
TGTTTGGTATGACAAACTTT+CGG 0.440918 6_3:+92711000 Msa0965360:CDS
ATCCAAATAGAGTCTTGTAT+TGG 0.447170 6_3:-92712927 None:intergenic
TCAATCCTCGACACACTTCG+CGG 0.449222 6_3:-92711826 None:intergenic
CAAGAAGAAGGAATGAGTTT+CGG 0.458989 6_3:+92712151 Msa0965360:CDS
TTTAGAAATCCAAAAGCAAA+AGG 0.462194 6_3:+92711460 Msa0965360:CDS
CAGAAAGAGAGAAGACACTA+AGG 0.462255 6_3:+92711230 Msa0965360:CDS
AATTGTAATGTTCTTTACCT+TGG 0.464078 6_3:-92711704 None:intergenic
ACAGATGGAAATGTTCTTGA+AGG 0.464421 6_3:-92711103 None:intergenic
TTGGTAGTTGAACCTTCCCT+TGG 0.465370 6_3:-92711505 None:intergenic
AATCTTGTTGCAAGGTTGAT+GGG 0.467441 6_3:+92711067 Msa0965360:CDS
GGATCATCACATGTCACAAA+TGG 0.467560 6_3:-92710359 None:intergenic
GGATAATATTTGTGCAATGT+TGG 0.470489 6_3:+92713135 Msa0965360:CDS
CATCAACCTTGCAACAAGAT+TGG 0.470581 6_3:-92711065 None:intergenic
CCCTTATTGCTAACTTGTGT+AGG 0.479938 6_3:+92713007 Msa0965360:CDS
CAAATCCTTTGCAATATCAT+CGG 0.484517 6_3:-92710639 None:intergenic
CTAACTGTGATGACTCTTGA+AGG 0.485315 6_3:-92712979 None:intergenic
ATCTTCTTTGCAGCTTGTGG+AGG 0.488367 6_3:+92710544 Msa0965360:CDS
ATTGATGCAAATGTGAATGA+TGG 0.489421 6_3:+92710779 Msa0965360:CDS
CAACATGAGAAAAGAGATGA+TGG 0.491361 6_3:+92711525 Msa0965360:CDS
GTCAAATTCTCACAAAATGA+AGG 0.492656 6_3:+92710421 Msa0965360:CDS
AAAGAAGAGAAGGTATCAAA+AGG 0.495584 6_3:+92710497 Msa0965360:CDS
TCCACAAGCTGCAAAGAAGA+TGG 0.495903 6_3:-92710542 None:intergenic
CCGATCAAGATCGGAAGGAC+TGG 0.502887 6_3:-92713471 None:intergenic
AACACAACATCATTTGTACT+TGG 0.505310 6_3:+92709287 Msa0965360:five_prime_UTR
TGCACGTAGTCAGCCACATC+AGG 0.507609 6_3:-92713499 None:intergenic
ACAACCCAGATCCATAACTA+AGG 0.507724 6_3:-92713345 None:intergenic
CAGCCCTTAGTTATGGATCT+GGG 0.510574 6_3:+92713341 Msa0965360:three_prime_UTR
CCTTATTGCTAACTTGTGTA+GGG 0.510663 6_3:+92713008 Msa0965360:CDS
CATTAGTTTCAATCTTTGGT+AGG 0.513835 6_3:-92712898 None:intergenic
ACAGCTGAAAGAAATATAAA+GGG 0.515108 6_3:+92709693 Msa0965360:five_prime_UTR
TAAGACAAAGTGCCGAAAGC+CGG 0.516544 6_3:+92710445 Msa0965360:CDS
ATGGAATGTGGAACTGTGGT+TGG 0.517006 6_3:+92713191 Msa0965360:CDS
CACAAAACCAAAGACACAAA+AGG 0.518586 6_3:+92711903 Msa0965360:CDS
CTGATTAGACTGTTTAGATG+TGG 0.518894 6_3:-92713392 None:intergenic
CGAGGTTTCATGAGTACAAT+CGG 0.522887 6_3:-92711376 None:intergenic
TCTCAGAAAACCGATACAAA+AGG 0.524589 6_3:+92711726 Msa0965360:CDS
ACCTCTAGTCTTATTTGCAT+AGG 0.528727 6_3:-92712257 None:intergenic
GAAAGTACAGATTTGAAGAT+CGG 0.534078 6_3:+92713414 Msa0965360:three_prime_UTR
CAGCTTGTGGAGGTCTCTAG+AGG 0.534580 6_3:+92710554 Msa0965360:CDS
TAGTCCTTATTATATATACA+AGG 0.535662 6_3:-92713567 None:intergenic
GTGGCAAAAGCTCAAGATCA+AGG 0.536217 6_3:+92711769 Msa0965360:CDS
GTAGTCCTATTAGAGAGCAC+AGG 0.539680 6_3:+92711293 Msa0965360:CDS
TTTGCAGATAATTGCGAGGA+GGG 0.540057 6_3:+92712608 Msa0965360:intron
TGGAACTGTGGTTGGAGGCA+TGG 0.542412 6_3:+92713199 Msa0965360:CDS
CAGATGGAAATGTTCTTGAA+GGG 0.547681 6_3:-92711102 None:intergenic
TCCTTCCGATCTTGATCGGA+CGG 0.552448 6_3:+92713475 Msa0965360:three_prime_UTR
AGGTGTGGTGAGGTGAATGA+AGG 0.556999 6_3:-92709219 None:intergenic
CCAGTCCTTCCGATCTTGAT+CGG 0.559187 6_3:+92713471 Msa0965360:three_prime_UTR
CAAAGCACAAGCACTTCTGA+AGG 0.559925 6_3:+92710923 Msa0965360:CDS
GTCTCTAGAGATGCTTCGTA+AGG 0.563353 6_3:+92710688 Msa0965360:CDS
TATGGATCTGGGTTGTGTGC+GGG 0.564068 6_3:+92713352 Msa0965360:three_prime_UTR
ACGAGCTTCCTCAGCAAGGA+TGG 0.565299 6_3:-92712687 None:intergenic
CAGGACCGTCCGATCAAGAT+CGG 0.569220 6_3:-92713480 None:intergenic
AAAGTACCAATCTTGTTGCA+AGG 0.570805 6_3:+92711059 Msa0965360:CDS
CAACTCTTCTATCCTTCCTG+TGG 0.571879 6_3:-92713599 None:intergenic
TAAACAAGACAAAGAAGAGA+AGG 0.573687 6_3:+92710487 Msa0965360:CDS
GTGAAGATGCTGATATCTAA+GGG 0.579426 6_3:-92713545 None:intergenic
AGATGGAAATGTTCTTGAAG+GGG 0.581235 6_3:-92711101 None:intergenic
CAAGAAGCTTCGAATAGTAT+GGG 0.582027 6_3:+92710713 Msa0965360:CDS
ATGATTGAGTCGTGGTCTAG+AGG 0.582241 6_3:+92710596 Msa0965360:CDS
ATATGATGTGAAAGAAATCA+AGG 0.588240 6_3:+92711612 Msa0965360:CDS
ATTGACTTGAGCTTGTAGAA+GGG 0.591382 6_3:-92710970 None:intergenic
ACAAAAGGTTAACAGTTCAA+AGG 0.591951 6_3:+92711918 Msa0965360:CDS
GAAGAAATTCAGATCCAAGT+GGG 0.592268 6_3:-92709499 None:intergenic
AAAACCTTCAAACCAAGGGA+AGG 0.592501 6_3:+92711493 Msa0965360:CDS
ATTGCTGACACCGTCTGTAT+CGG 0.594229 6_3:+92712755 Msa0965360:CDS
GAAACAAGTTTCACTGACGC+TGG 0.594603 6_3:-92712717 None:intergenic
TTGATCGGACGGTCCTGATG+TGG 0.597073 6_3:+92713486 Msa0965360:three_prime_UTR
GGTGTGTCAATCTCGAACAC+AGG 0.598187 6_3:-92711172 None:intergenic
CTAAAGGAAAACTCTTCTCG+AGG 0.598786 6_3:-92711442 None:intergenic
AGAGACAGTGTCACACAAAG+TGG 0.600354 6_3:-92709195 None:intergenic
ATAGGTTGATAAATGGAATG+TGG 0.600587 6_3:+92713179 Msa0965360:CDS
ACCGTCCGATCAAGATCGGA+AGG 0.601177 6_3:-92713476 None:intergenic
TCTAGAGGTGTGAGGTACGA+TGG 0.603601 6_3:+92710611 Msa0965360:CDS
TTATGGATCTGGGTTGTGTG+CGG 0.610047 6_3:+92713351 Msa0965360:three_prime_UTR
CTCTTCAAGTAGTTGTAGAG+AGG 0.610288 6_3:+92710853 Msa0965360:CDS
GAATGTGGAACTGTGGTTGG+AGG 0.612560 6_3:+92713194 Msa0965360:CDS
AGAAAGAGAGAAGACACTAA+GGG 0.612920 6_3:+92711231 Msa0965360:CDS
GATTGAGAAACTCATCTGCA+TGG 0.613355 6_3:-92712853 None:intergenic
CAACCCAGATCCATAACTAA+GGG 0.615587 6_3:-92713344 None:intergenic
AAAATCCGATGATATTGCAA+AGG 0.617942 6_3:+92710634 Msa0965360:CDS
CAAGGCTGTTGAAAGCAAGA+AGG 0.619477 6_3:+92711630 Msa0965360:CDS
TCGATTGAAGAGAAGACAAG+AGG 0.624969 6_3:+92710736 Msa0965360:CDS
CAGAAAACCGATACAAAAGG+AGG 0.626337 6_3:+92711729 Msa0965360:CDS
GTGACATGTGATGATCCAAA+AGG 0.628008 6_3:+92710365 Msa0965360:CDS
CCAAAAGGAGTTGTTGAGTG+TGG 0.631426 6_3:+92710380 Msa0965360:CDS
ACCTATGCAAATAAGACTAG+AGG 0.635482 6_3:+92712256 Msa0965360:CDS
CTACACAAGTTAGCAATAAG+GGG 0.636387 6_3:-92713006 None:intergenic
GAAAGCCGCGAAGTGTGTCG+AGG 0.637298 6_3:+92711821 Msa0965360:CDS
CGATTGTACTCATGAAACCT+CGG 0.638305 6_3:+92711377 Msa0965360:CDS
AAATGATACCATCCTTGCTG+AGG 0.642227 6_3:+92712679 Msa0965360:CDS
GACAAATTGTAAGATCCAAG+AGG 0.644894 6_3:+92710171 Msa0965360:five_prime_UTR
TTGTTGAGTGTGGAAGTCTG+AGG 0.647195 6_3:+92710390 Msa0965360:CDS
AGGACTAAGAAATTGACCAC+AGG 0.651037 6_3:+92713583 Msa0965360:three_prime_UTR
AGAAATTCAGATCCAAGTGG+GGG 0.651674 6_3:-92709497 None:intergenic
GGTTTCAAAAGCTAAAATTG+TGG 0.654649 6_3:+92711750 Msa0965360:CDS
TGTCACGAGCTTCCTCAGCA+AGG 0.661150 6_3:-92712691 None:intergenic
ACATACAAAGAGGTGTGGTG+AGG 0.663808 6_3:-92709229 None:intergenic
AAGAAATTCAGATCCAAGTG+GGG 0.664976 6_3:-92709498 None:intergenic
ATCGGTTTCACCGATACAGA+CGG 0.665581 6_3:-92712765 None:intergenic
ATAAATGGAATGTGGAACTG+TGG 0.666233 6_3:+92713187 Msa0965360:CDS
ATCATGTGAATGAAGTTGCG+TGG 0.666706 6_3:+92709163 Msa0965360:five_prime_UTR
CTAAGAAATTGACCACAGGA+AGG 0.671875 6_3:+92713587 Msa0965360:three_prime_UTR
TGAACAACATGATTGAGTCG+TGG 0.687574 6_3:+92710588 Msa0965360:CDS
AGAAGAAATTCAGATCCAAG+TGG 0.698768 6_3:-92709500 None:intergenic
TAAGGGATTTGAAACGTGTG+CGG 0.700220 6_3:-92713528 None:intergenic
GAAATTCAGATCCAAGTGGG+GGG 0.702493 6_3:-92709496 None:intergenic
GTTCGAGATTGACACACCGA+AGG 0.719145 6_3:+92711177 Msa0965360:CDS
AGTCGTGGTCTAGAGGTGTG+AGG 0.724136 6_3:+92710603 Msa0965360:CDS
GGTTTCATGAGTACAATCGG+TGG 0.732087 6_3:-92711373 None:intergenic
ACAAGTTTCACTGACGCTGG+TGG 0.738203 6_3:-92712714 None:intergenic
AGTAACAGAAGATCTCATCG+TGG 0.778770 6_3:+92712219 Msa0965360:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTTTTTTAGTGTGTTTT+TGG + chr6_3:92709776-92709795 Msa0965360:intron 15.0%
!! GAAATTTCATAAAATAACTT+AGG - chr6_3:92710301-92710320 None:intergenic 15.0%
!!! TTTATTTGTCTCTAAATTTT+CGG - chr6_3:92710471-92710490 None:intergenic 15.0%
!!! TTATATATTTTGAGACATTT+TGG + chr6_3:92713313-92713332 Msa0965360:three_prime_UTR 15.0%
!! AGATTATGAAAGTGAAAAAT+GGG - chr6_3:92709330-92709349 None:intergenic 20.0%
!! AAGATTATGAAAGTGAAAAA+TGG - chr6_3:92709331-92709350 None:intergenic 20.0%
!! AAACTTCTCAAAATATTTCT+GGG + chr6_3:92709558-92709577 Msa0965360:five_prime_UTR 20.0%
!!! ATCAGTTTTTGATGAATATT+AGG + chr6_3:92709865-92709884 Msa0965360:intron 20.0%
!! AAACATTAGCAAATTGTTAA+TGG + chr6_3:92709993-92710012 Msa0965360:intron 20.0%
!! ATAGAGACTGATTAATATAA+TGG + chr6_3:92710102-92710121 Msa0965360:intron 20.0%
!!! TCATTTTTTTTTTGTCTCTA+TGG + chr6_3:92712019-92712038 Msa0965360:intron 20.0%
!!! TAAATTTCTAAAATTGTCAC+TGG + chr6_3:92712279-92712298 Msa0965360:intron 20.0%
!! TTATACTATTTATCCAAACA+GGG - chr6_3:92712316-92712335 None:intergenic 20.0%
!! ATTATACTATTTATCCAAAC+AGG - chr6_3:92712317-92712336 None:intergenic 20.0%
!! CATATAAGTTCTTATGTATA+TGG + chr6_3:92712363-92712382 Msa0965360:intron 20.0%
!! TTCACCTTGTATATATAATA+AGG + chr6_3:92713563-92713582 Msa0965360:three_prime_UTR 20.0%
!! TAGTCCTTATTATATATACA+AGG - chr6_3:92713570-92713589 None:intergenic 20.0%
! AGTGAAAAATGGGAAAAAAT+GGG - chr6_3:92709320-92709339 None:intergenic 25.0%
! AAGTGAAAAATGGGAAAAAA+TGG - chr6_3:92709321-92709340 None:intergenic 25.0%
! GAAACTTCTCAAAATATTTC+TGG + chr6_3:92709557-92709576 Msa0965360:five_prime_UTR 25.0%
!! TTTTTCATGAATTTCTCAAG+TGG + chr6_3:92709620-92709639 Msa0965360:five_prime_UTR 25.0%
!! TTTTCATGAATTTCTCAAGT+GGG + chr6_3:92709621-92709640 Msa0965360:five_prime_UTR 25.0%
! AACAGCTGAAAGAAATATAA+AGG + chr6_3:92709692-92709711 Msa0965360:five_prime_UTR 25.0%
! ACAGCTGAAAGAAATATAAA+GGG + chr6_3:92709693-92709712 Msa0965360:five_prime_UTR 25.0%
!! GCTTCTTTTTATGTGATTTT+TGG + chr6_3:92709747-92709766 Msa0965360:intron 25.0%
!!! CTTTTTGTTTGTTTCTTTCT+AGG + chr6_3:92710058-92710077 Msa0965360:intron 25.0%
!!! TATAATGGTTTTTGTTTCAG+TGG + chr6_3:92710117-92710136 Msa0965360:intron 25.0%
!!! ATAATGGTTTTTGTTTCAGT+GGG + chr6_3:92710118-92710137 Msa0965360:intron 25.0%
!!! ATTGCAAAGGATTTGTTAAA+AGG + chr6_3:92710647-92710666 Msa0965360:CDS 25.0%
!!! TTTTGCTTTTGGATTTCTAA+AGG - chr6_3:92711461-92711480 None:intergenic 25.0%
! TTTAGAAATCCAAAAGCAAA+AGG + chr6_3:92711460-92711479 Msa0965360:CDS 25.0%
! ATCCAAAAAGTTTATCAAAG+AGG + chr6_3:92711558-92711577 Msa0965360:CDS 25.0%
! ATATGATGTGAAAGAAATCA+AGG + chr6_3:92711612-92711631 Msa0965360:CDS 25.0%
! AATTGTAATGTTCTTTACCT+TGG - chr6_3:92711707-92711726 None:intergenic 25.0%
! ATGACAGTAAAACTTACAAT+AGG - chr6_3:92712003-92712022 None:intergenic 25.0%
! TATCTTGCATAAAAGAGTTT+AGG + chr6_3:92712068-92712087 Msa0965360:intron 25.0%
! AATGAATTGAAACTCATTGA+AGG - chr6_3:92712102-92712121 None:intergenic 25.0%
! GAAAAATTAAAGCAAGAAGA+AGG + chr6_3:92712139-92712158 Msa0965360:CDS 25.0%
! TGCTTCTAATAATCTAACAA+GGG - chr6_3:92712536-92712555 None:intergenic 25.0%
! TATCATCACACTGAATAAAT+TGG + chr6_3:92712560-92712579 Msa0965360:intron 25.0%
!! ATTCCATTAGTTTCAATCTT+TGG - chr6_3:92712905-92712924 None:intergenic 25.0%
!!! TTCTGAGACTAAACTTATTT+TGG + chr6_3:92713114-92713133 Msa0965360:CDS 25.0%
!! GAAGTAGAAAACATGATTTT+AGG + chr6_3:92713256-92713275 Msa0965360:CDS 25.0%
AAAAAACATACAAAGAGGTG+TGG - chr6_3:92709237-92709256 None:intergenic 30.0%
!!! ACACCTCTTTGTATGTTTTT+TGG + chr6_3:92709236-92709255 Msa0965360:five_prime_UTR 30.0%
GTTCCAAAAAACATACAAAG+AGG - chr6_3:92709242-92709261 None:intergenic 30.0%
AACACAACATCATTTGTACT+TGG + chr6_3:92709287-92709306 Msa0965360:five_prime_UTR 30.0%
! AAAATGGGAAAAAATGGGTT+TGG - chr6_3:92709315-92709334 None:intergenic 30.0%
! CTTTTTCTCATGGTTTTTTG+AGG + chr6_3:92709651-92709670 Msa0965360:five_prime_UTR 30.0%
!!! AGTTTTGTTTCATGAAACCA+TGG + chr6_3:92709718-92709737 Msa0965360:intron 30.0%
TAAAAAGAAGCTGTAATCCA+TGG - chr6_3:92709738-92709757 None:intergenic 30.0%
!! TGCTGCTTTAAGAATCTATT+TGG + chr6_3:92709970-92709989 Msa0965360:intron 30.0%
! TTTGTTTGTTTCTTTCTAGG+TGG + chr6_3:92710061-92710080 Msa0965360:intron 30.0%
! TTGTTTGTTTCTTTCTAGGT+GGG + chr6_3:92710062-92710081 Msa0965360:intron 30.0%
! TCTGTGACAGAATATTTCTA+AGG + chr6_3:92710319-92710338 Msa0965360:intron 30.0%
GTCAAATTCTCACAAAATGA+AGG + chr6_3:92710421-92710440 Msa0965360:CDS 30.0%
TAAACAAGACAAAGAAGAGA+AGG + chr6_3:92710487-92710506 Msa0965360:CDS 30.0%
!! AAAGAAGAGAAGGTATCAAA+AGG + chr6_3:92710497-92710516 Msa0965360:CDS 30.0%
AAAATCCGATGATATTGCAA+AGG + chr6_3:92710634-92710653 Msa0965360:CDS 30.0%
CAAATCCTTTGCAATATCAT+CGG - chr6_3:92710642-92710661 None:intergenic 30.0%
ATTGATGCAAATGTGAATGA+TGG + chr6_3:92710779-92710798 Msa0965360:CDS 30.0%
TTTGAACACAATTCAGCTTA+TGG + chr6_3:92710830-92710849 Msa0965360:CDS 30.0%
GGAACTTAAGAAAGTGATTA+AGG + chr6_3:92710874-92710893 Msa0965360:CDS 30.0%
TGTTTGGTATGACAAACTTT+CGG + chr6_3:92711000-92711019 Msa0965360:CDS 30.0%
! TTTTCCTTCCTTGAAAAAGT+TGG - chr6_3:92711040-92711059 None:intergenic 30.0%
ATCTGTTATGCAAAAACAGT+CGG + chr6_3:92711120-92711139 Msa0965360:CDS 30.0%
CTTGAAACTACTCATTTCAA+TGG + chr6_3:92711259-92711278 Msa0965360:CDS 30.0%
TTCAAAAACCTTCAAACCAA+GGG + chr6_3:92711489-92711508 Msa0965360:CDS 30.0%
! CTCCTCTTTGATAAACTTTT+TGG - chr6_3:92711563-92711582 None:intergenic 30.0%
!! TTTGAAACCTCCTTTTGTAT+CGG - chr6_3:92711739-92711758 None:intergenic 30.0%
GGTTTCAAAAGCTAAAATTG+TGG + chr6_3:92711750-92711769 Msa0965360:CDS 30.0%
ACAAAAGGTTAACAGTTCAA+AGG + chr6_3:92711918-92711937 Msa0965360:CDS 30.0%
AATTCATTATTCTTGTGCAC+AGG + chr6_3:92712114-92712133 Msa0965360:intron 30.0%
GTGCTTCTAATAATCTAACA+AGG - chr6_3:92712537-92712556 None:intergenic 30.0%
! ATGGTCAATAAATGATTTGC+TGG - chr6_3:92712837-92712856 None:intergenic 30.0%
GAGTTTCTCAATCTTGATAT+TGG + chr6_3:92712863-92712882 Msa0965360:CDS 30.0%
! CATTAGTTTCAATCTTTGGT+AGG - chr6_3:92712901-92712920 None:intergenic 30.0%
CTACCAAAGATTGAAACTAA+TGG + chr6_3:92712899-92712918 Msa0965360:CDS 30.0%
ATCCAATACAAGACTCTATT+TGG + chr6_3:92712925-92712944 Msa0965360:CDS 30.0%
! ATCCAAATAGAGTCTTGTAT+TGG - chr6_3:92712930-92712949 None:intergenic 30.0%
TTCAAGATTGCAAATCTCTT+TGG + chr6_3:92713033-92713052 Msa0965360:CDS 30.0%
TCAAGATTGCAAATCTCTTT+GGG + chr6_3:92713034-92713053 Msa0965360:CDS 30.0%
GGATAATATTTGTGCAATGT+TGG + chr6_3:92713135-92713154 Msa0965360:CDS 30.0%
!! TGCAACAATAGGTTGATAAA+TGG + chr6_3:92713172-92713191 Msa0965360:CDS 30.0%
!! ATAGGTTGATAAATGGAATG+TGG + chr6_3:92713179-92713198 Msa0965360:CDS 30.0%
! GTAGAAAACATGATTTTAGG+TGG + chr6_3:92713259-92713278 Msa0965360:CDS 30.0%
!!! GATTTTAGGTGGATTAATTG+AGG + chr6_3:92713270-92713289 Msa0965360:CDS 30.0%
! GAAAGTACAGATTTGAAGAT+CGG + chr6_3:92713414-92713433 Msa0965360:three_prime_UTR 30.0%
!!! TGATGGTGTGTTTGGTTTTT+TGG - chr6_3:92709396-92709415 None:intergenic 35.0%
GCTTAAAAAACAGCAAGTGA+TGG - chr6_3:92709413-92709432 None:intergenic 35.0%
AAGAAATTCAGATCCAAGTG+GGG - chr6_3:92709501-92709520 None:intergenic 35.0%
GAAGAAATTCAGATCCAAGT+GGG - chr6_3:92709502-92709521 None:intergenic 35.0%
AGAAGAAATTCAGATCCAAG+TGG - chr6_3:92709503-92709522 None:intergenic 35.0%
!! GGGTCATTTTCTTTTTCTCA+TGG + chr6_3:92709641-92709660 Msa0965360:five_prime_UTR 35.0%
!!! TTCTCATGGTTTTTTGAGGT+TGG + chr6_3:92709655-92709674 Msa0965360:five_prime_UTR 35.0%
GACAAATTGTAAGATCCAAG+AGG + chr6_3:92710171-92710190 Msa0965360:five_prime_UTR 35.0%
! TTTGTCTCTAAATTTTCGGC+CGG - chr6_3:92710467-92710486 None:intergenic 35.0%
CAAGAAGCTTCGAATAGTAT+GGG + chr6_3:92710713-92710732 Msa0965360:CDS 35.0%
GAAAGTGATTAAGGAGAGTT+TGG + chr6_3:92710883-92710902 Msa0965360:CDS 35.0%
!! ATTGACTTGAGCTTGTAGAA+GGG - chr6_3:92710973-92710992 None:intergenic 35.0%
CAAGTCAATCTTCTGTTGTT+TGG + chr6_3:92710984-92711003 Msa0965360:CDS 35.0%
!!! CATGTTCACCAACTTTTTCA+AGG + chr6_3:92711029-92711048 Msa0965360:CDS 35.0%
!!! TTCACCAACTTTTTCAAGGA+AGG + chr6_3:92711033-92711052 Msa0965360:CDS 35.0%
! AAAGTACCAATCTTGTTGCA+AGG + chr6_3:92711059-92711078 Msa0965360:CDS 35.0%
! AATCTTGTTGCAAGGTTGAT+GGG + chr6_3:92711067-92711086 Msa0965360:CDS 35.0%
AGATGGAAATGTTCTTGAAG+GGG - chr6_3:92711104-92711123 None:intergenic 35.0%
CAGATGGAAATGTTCTTGAA+GGG - chr6_3:92711105-92711124 None:intergenic 35.0%
ACAGATGGAAATGTTCTTGA+AGG - chr6_3:92711106-92711125 None:intergenic 35.0%
!!! GACTGTTTTTGCATAACAGA+TGG - chr6_3:92711121-92711140 None:intergenic 35.0%
GAACTATGCTTTCTTACCTT+CGG - chr6_3:92711196-92711215 None:intergenic 35.0%
AGAAAGAGAGAAGACACTAA+GGG + chr6_3:92711231-92711250 Msa0965360:CDS 35.0%
!! CTTGGTTTGAAGGTTTTTGA+AGG - chr6_3:92711490-92711509 None:intergenic 35.0%
CTTCAAAAACCTTCAAACCA+AGG + chr6_3:92711488-92711507 Msa0965360:CDS 35.0%
! CATCATCTCTTTTCTCATGT+TGG - chr6_3:92711527-92711546 None:intergenic 35.0%
CAACATGAGAAAAGAGATGA+TGG + chr6_3:92711525-92711544 Msa0965360:CDS 35.0%
!! AACAGTTGATGAAAAAGCCA+AGG + chr6_3:92711687-92711706 Msa0965360:CDS 35.0%
TCTCAGAAAACCGATACAAA+AGG + chr6_3:92711726-92711745 Msa0965360:CDS 35.0%
GATGAAATGCTCTTTCTAGA+TGG - chr6_3:92711865-92711884 None:intergenic 35.0%
!!! TTGTGTCTTTGGTTTTGTGA+TGG - chr6_3:92711902-92711921 None:intergenic 35.0%
CACAAAACCAAAGACACAAA+AGG + chr6_3:92711903-92711922 Msa0965360:CDS 35.0%
! CTGTTAACCTTTTGTGTCTT+TGG - chr6_3:92711913-92711932 None:intergenic 35.0%
CAAGAAGAAGGAATGAGTTT+CGG + chr6_3:92712151-92712170 Msa0965360:CDS 35.0%
ACCTATGCAAATAAGACTAG+AGG + chr6_3:92712256-92712275 Msa0965360:CDS 35.0%
!! ACCTCTAGTCTTATTTGCAT+AGG - chr6_3:92712260-92712279 None:intergenic 35.0%
AATTGTCACTGGATACACTT+TGG + chr6_3:92712290-92712309 Msa0965360:intron 35.0%
! TAATCTAACAAGGGCATGTT+TGG - chr6_3:92712527-92712546 None:intergenic 35.0%
CATCATCAACTGAAGAATTC+TGG - chr6_3:92712634-92712653 None:intergenic 35.0%
TCAATCTTTGGTAGGATCTT+AGG - chr6_3:92712893-92712912 None:intergenic 35.0%
CTACACAAGTTAGCAATAAG+GGG - chr6_3:92713009-92713028 None:intergenic 35.0%
CCTACACAAGTTAGCAATAA+GGG - chr6_3:92713010-92713029 None:intergenic 35.0%
! CCTTATTGCTAACTTGTGTA+GGG + chr6_3:92713008-92713027 Msa0965360:CDS 35.0%
GAGATATGAAGTGCAACAAT+AGG + chr6_3:92713161-92713180 Msa0965360:CDS 35.0%
ATAAATGGAATGTGGAACTG+TGG + chr6_3:92713187-92713206 Msa0965360:CDS 35.0%
CTGATTAGACTGTTTAGATG+TGG - chr6_3:92713395-92713414 None:intergenic 35.0%
GTGAAGATGCTGATATCTAA+GGG - chr6_3:92713548-92713567 None:intergenic 35.0%
ATCATGTGAATGAAGTTGCG+TGG + chr6_3:92709163-92709182 Msa0965360:five_prime_UTR 40.0%
GTGTCACACAAAGTGGAAAA+TGG - chr6_3:92709191-92709210 None:intergenic 40.0%
AGAAATTCAGATCCAAGTGG+GGG - chr6_3:92709500-92709519 None:intergenic 40.0%
CTTACATGATCTTGTCCTCT+TGG - chr6_3:92710189-92710208 None:intergenic 40.0%
GGATCATCACATGTCACAAA+TGG - chr6_3:92710362-92710381 None:intergenic 40.0%
GTGACATGTGATGATCCAAA+AGG + chr6_3:92710365-92710384 Msa0965360:CDS 40.0%
TGAACAACATGATTGAGTCG+TGG + chr6_3:92710588-92710607 Msa0965360:CDS 40.0%
GCAAGAAGCTTCGAATAGTA+TGG + chr6_3:92710712-92710731 Msa0965360:CDS 40.0%
TCGATTGAAGAGAAGACAAG+AGG + chr6_3:92710736-92710755 Msa0965360:CDS 40.0%
CTCTTCAAGTAGTTGTAGAG+AGG + chr6_3:92710853-92710872 Msa0965360:CDS 40.0%
!! GATTGACTTGAGCTTGTAGA+AGG - chr6_3:92710974-92710993 None:intergenic 40.0%
CATCAACCTTGCAACAAGAT+TGG - chr6_3:92711068-92711087 None:intergenic 40.0%
CAATCTTGTTGCAAGGTTGA+TGG + chr6_3:92711066-92711085 Msa0965360:CDS 40.0%
CTTAGTGTCTTCTCTCTTTC+TGG - chr6_3:92711232-92711251 None:intergenic 40.0%
CAGAAAGAGAGAAGACACTA+AGG + chr6_3:92711230-92711249 Msa0965360:CDS 40.0%
CGAGGTTTCATGAGTACAAT+CGG - chr6_3:92711379-92711398 None:intergenic 40.0%
CGATTGTACTCATGAAACCT+CGG + chr6_3:92711377-92711396 Msa0965360:CDS 40.0%
CTAAAGGAAAACTCTTCTCG+AGG - chr6_3:92711445-92711464 None:intergenic 40.0%
! GAAGGAACTCCTTTTGCTTT+TGG - chr6_3:92711472-92711491 None:intergenic 40.0%
AAAACCTTCAAACCAAGGGA+AGG + chr6_3:92711493-92711512 Msa0965360:CDS 40.0%
CAGAAAACCGATACAAAAGG+AGG + chr6_3:92711729-92711748 Msa0965360:CDS 40.0%
ACAATAGGTTTAGCTGCTTC+AGG - chr6_3:92711988-92712007 None:intergenic 40.0%
AGTAACAGAAGATCTCATCG+TGG + chr6_3:92712219-92712238 Msa0965360:CDS 40.0%
GTCGATGAGCATCTCATAAA+CGG + chr6_3:92712458-92712477 Msa0965360:intron 40.0%
CCTCGCAATTATCTGCAAAA+GGG - chr6_3:92712607-92712626 None:intergenic 40.0%
TCCTCGCAATTATCTGCAAA+AGG - chr6_3:92712608-92712627 None:intergenic 40.0%
! TTTTGCAGATAATTGCGAGG+AGG + chr6_3:92712607-92712626 Msa0965360:intron 40.0%
TTTGCAGATAATTGCGAGGA+GGG + chr6_3:92712608-92712627 Msa0965360:intron 40.0%
AAATGATACCATCCTTGCTG+AGG + chr6_3:92712679-92712698 Msa0965360:CDS 40.0%
GATTGAGAAACTCATCTGCA+TGG - chr6_3:92712856-92712875 None:intergenic 40.0%
CTAACTGTGATGACTCTTGA+AGG - chr6_3:92712982-92713001 None:intergenic 40.0%
! CCCTTATTGCTAACTTGTGT+AGG + chr6_3:92713007-92713026 Msa0965360:CDS 40.0%
CCCTACACAAGTTAGCAATA+AGG - chr6_3:92713011-92713030 None:intergenic 40.0%
! GCAAATCTCTTTGGGAAGTT+TGG + chr6_3:92713042-92713061 Msa0965360:CDS 40.0%
GGATATACAGCCCTTAGTTA+TGG + chr6_3:92713334-92713353 Msa0965360:three_prime_UTR 40.0%
CAACCCAGATCCATAACTAA+GGG - chr6_3:92713347-92713366 None:intergenic 40.0%
ACAACCCAGATCCATAACTA+AGG - chr6_3:92713348-92713367 None:intergenic 40.0%
! TAAGGGATTTGAAACGTGTG+CGG - chr6_3:92713531-92713550 None:intergenic 40.0%
GGTGAAGATGCTGATATCTA+AGG - chr6_3:92713549-92713568 None:intergenic 40.0%
AGGACTAAGAAATTGACCAC+AGG + chr6_3:92713583-92713602 Msa0965360:three_prime_UTR 40.0%
CTAAGAAATTGACCACAGGA+AGG + chr6_3:92713587-92713606 Msa0965360:three_prime_UTR 40.0%
AGAGACAGTGTCACACAAAG+TGG - chr6_3:92709198-92709217 None:intergenic 45.0%
! ACATACAAAGAGGTGTGGTG+AGG - chr6_3:92709232-92709251 None:intergenic 45.0%
! ACAGCAAGTGATGGTGTGTT+TGG - chr6_3:92709404-92709423 None:intergenic 45.0%
! TGGGGGGTGTAGAAAAAAAG+GGG - chr6_3:92709483-92709502 None:intergenic 45.0%
! GTGGGGGGTGTAGAAAAAAA+GGG - chr6_3:92709484-92709503 None:intergenic 45.0%
! AGTGGGGGGTGTAGAAAAAA+AGG - chr6_3:92709485-92709504 None:intergenic 45.0%
!!! TTTTTTCTACACCCCCCACT+TGG + chr6_3:92709485-92709504 Msa0965360:five_prime_UTR 45.0%
GAAATTCAGATCCAAGTGGG+GGG - chr6_3:92709499-92709518 None:intergenic 45.0%
! CCACACTCAACAACTCCTTT+TGG - chr6_3:92710383-92710402 None:intergenic 45.0%
CCAAAAGGAGTTGTTGAGTG+TGG + chr6_3:92710380-92710399 Msa0965360:CDS 45.0%
TTGTTGAGTGTGGAAGTCTG+AGG + chr6_3:92710390-92710409 Msa0965360:CDS 45.0%
GTGGAAGTCTGAGGAGATAT+AGG + chr6_3:92710399-92710418 Msa0965360:CDS 45.0%
!! TAAGACAAAGTGCCGAAAGC+CGG + chr6_3:92710445-92710464 Msa0965360:CDS 45.0%
!! CTAAATTTTCGGCCGGCTTT+CGG - chr6_3:92710460-92710479 None:intergenic 45.0%
TCCATCTTCTTTGCAGCTTG+TGG + chr6_3:92710541-92710560 Msa0965360:CDS 45.0%
TCCACAAGCTGCAAAGAAGA+TGG - chr6_3:92710545-92710564 None:intergenic 45.0%
ATCTTCTTTGCAGCTTGTGG+AGG + chr6_3:92710544-92710563 Msa0965360:CDS 45.0%
ATGATTGAGTCGTGGTCTAG+AGG + chr6_3:92710596-92710615 Msa0965360:CDS 45.0%
! GTCTCTAGAGATGCTTCGTA+AGG + chr6_3:92710688-92710707 Msa0965360:CDS 45.0%
!! CTTCAGAAGTGCTTGTGCTT+TGG - chr6_3:92710925-92710944 None:intergenic 45.0%
CAAAGCACAAGCACTTCTGA+AGG + chr6_3:92710923-92710942 Msa0965360:CDS 45.0%
! CACAAGCACTTCTGAAGGAT+TGG + chr6_3:92710928-92710947 Msa0965360:CDS 45.0%
! GTAGTCCTATTAGAGAGCAC+AGG + chr6_3:92711293-92711312 Msa0965360:CDS 45.0%
GGTTTCATGAGTACAATCGG+TGG - chr6_3:92711376-92711395 None:intergenic 45.0%
GAAAACTCTTCTCGAGGAAC+CGG - chr6_3:92711439-92711458 None:intergenic 45.0%
! TGAACCTTCCCTTGGTTTGA+AGG - chr6_3:92711500-92711519 None:intergenic 45.0%
! TTGGTAGTTGAACCTTCCCT+TGG - chr6_3:92711508-92711527 None:intergenic 45.0%
CAAGGCTGTTGAAAGCAAGA+AGG + chr6_3:92711630-92711649 Msa0965360:CDS 45.0%
GTGGCAAAAGCTCAAGATCA+AGG + chr6_3:92711769-92711788 Msa0965360:CDS 45.0%
CTCAAGATCAAGGCGAAATC+AGG + chr6_3:92711779-92711798 Msa0965360:CDS 45.0%
! CCCTTTTGCAGATAATTGCG+AGG + chr6_3:92712604-92712623 Msa0965360:intron 45.0%
GAAACAAGTTTCACTGACGC+TGG - chr6_3:92712720-92712739 None:intergenic 45.0%
ATTGCTGACACCGTCTGTAT+CGG + chr6_3:92712755-92712774 Msa0965360:CDS 45.0%
! ATCGGTTTCACCGATACAGA+CGG - chr6_3:92712768-92712787 None:intergenic 45.0%
! GTCTTTGTCTGGCTCGAAAT+CGG - chr6_3:92712786-92712805 None:intergenic 45.0%
!! AGCTCAGAAGTGTCTTTGTC+TGG - chr6_3:92712797-92712816 None:intergenic 45.0%
ATGGAATGTGGAACTGTGGT+TGG + chr6_3:92713191-92713210 Msa0965360:CDS 45.0%
ACAGCCCTTAGTTATGGATC+TGG + chr6_3:92713340-92713359 Msa0965360:three_prime_UTR 45.0%
CAGCCCTTAGTTATGGATCT+GGG + chr6_3:92713341-92713360 Msa0965360:three_prime_UTR 45.0%
TTATGGATCTGGGTTGTGTG+CGG + chr6_3:92713351-92713370 Msa0965360:three_prime_UTR 45.0%
AGGTGTGGTGAGGTGAATGA+AGG - chr6_3:92709222-92709241 None:intergenic 50.0%
! GGGGGGTGTAGAAAAAAAGG+GGG - chr6_3:92709482-92709501 None:intergenic 50.0%
! TCTAGAGGTGTGAGGTACGA+TGG + chr6_3:92710611-92710630 Msa0965360:CDS 50.0%
GGTGTGTCAATCTCGAACAC+AGG - chr6_3:92711175-92711194 None:intergenic 50.0%
GTTCGAGATTGACACACCGA+AGG + chr6_3:92711177-92711196 Msa0965360:CDS 50.0%
CGAAGCCTGTGCTCTCTAAT+AGG - chr6_3:92711301-92711320 None:intergenic 50.0%
GTTCGTAGAAACGTACGAGC+CGG + chr6_3:92711417-92711436 Msa0965360:CDS 50.0%
! GAAGCGCGTCAACGAGTTTT+TGG + chr6_3:92711588-92711607 Msa0965360:CDS 50.0%
TCAATCCTCGACACACTTCG+CGG - chr6_3:92711829-92711848 None:intergenic 50.0%
GGATACACTTTGGCCCTGTT+TGG + chr6_3:92712300-92712319 Msa0965360:intron 50.0%
ACAAGTTTCACTGACGCTGG+TGG - chr6_3:92712717-92712736 None:intergenic 50.0%
GAATGTGGAACTGTGGTTGG+AGG + chr6_3:92713194-92713213 Msa0965360:CDS 50.0%
TATGGATCTGGGTTGTGTGC+GGG + chr6_3:92713352-92713371 Msa0965360:three_prime_UTR 50.0%
CCAGTCCTTCCGATCTTGAT+CGG + chr6_3:92713471-92713490 Msa0965360:three_prime_UTR 50.0%
TCCTTCCGATCTTGATCGGA+CGG + chr6_3:92713475-92713494 Msa0965360:three_prime_UTR 50.0%
CAGCTTGTGGAGGTCTCTAG+AGG + chr6_3:92710554-92710573 Msa0965360:CDS 55.0%
! AGTCGTGGTCTAGAGGTGTG+AGG + chr6_3:92710603-92710622 Msa0965360:CDS 55.0%
ACGAGCTTCCTCAGCAAGGA+TGG - chr6_3:92712690-92712709 None:intergenic 55.0%
TGTCACGAGCTTCCTCAGCA+AGG - chr6_3:92712694-92712713 None:intergenic 55.0%
TGGAACTGTGGTTGGAGGCA+TGG + chr6_3:92713199-92713218 Msa0965360:CDS 55.0%
CCGATCAAGATCGGAAGGAC+TGG - chr6_3:92713474-92713493 None:intergenic 55.0%
ACCGTCCGATCAAGATCGGA+AGG - chr6_3:92713479-92713498 None:intergenic 55.0%
CAGGACCGTCCGATCAAGAT+CGG - chr6_3:92713483-92713502 None:intergenic 55.0%
TTGATCGGACGGTCCTGATG+TGG + chr6_3:92713486-92713505 Msa0965360:three_prime_UTR 55.0%
TGCACGTAGTCAGCCACATC+AGG - chr6_3:92713502-92713521 None:intergenic 55.0%
GAAAGCCGCGAAGTGTGTCG+AGG + chr6_3:92711821-92711840 Msa0965360:CDS 60.0%
ACCTCGGCGCGCTTCGTATC+AGG + chr6_3:92711393-92711412 Msa0965360:CDS 65.0%
TCCTGATACGAAGCGCGCCG+AGG - chr6_3:92711397-92711416 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 92709149 92713616 92709149 ID=Msa0965360;Name=Msa0965360
chr6_3 mRNA 92709149 92713616 92709149 ID=Msa0965360-mRNA-1;Parent=Msa0965360;Name=Msa0965360-mRNA-1;_AED=0.01;_eAED=0.01;_QI=654|1|1|1|0.5|0.4|5|304|831
chr6_3 exon 92709149 92709714 92709149 ID=Msa0965360-mRNA-1:exon:16914;Parent=Msa0965360-mRNA-1
chr6_3 exon 92710137 92710203 92710137 ID=Msa0965360-mRNA-1:exon:16915;Parent=Msa0965360-mRNA-1
chr6_3 exon 92710329 92712005 92710329 ID=Msa0965360-mRNA-1:exon:16916;Parent=Msa0965360-mRNA-1
chr6_3 exon 92712136 92712277 92712136 ID=Msa0965360-mRNA-1:exon:16917;Parent=Msa0965360-mRNA-1
chr6_3 exon 92712615 92713616 92712615 ID=Msa0965360-mRNA-1:exon:16918;Parent=Msa0965360-mRNA-1
chr6_3 five_prime_UTR 92709149 92709714 92709149 ID=Msa0965360-mRNA-1:five_prime_utr;Parent=Msa0965360-mRNA-1
chr6_3 five_prime_UTR 92710137 92710203 92710137 ID=Msa0965360-mRNA-1:five_prime_utr;Parent=Msa0965360-mRNA-1
chr6_3 five_prime_UTR 92710329 92710349 92710329 ID=Msa0965360-mRNA-1:five_prime_utr;Parent=Msa0965360-mRNA-1
chr6_3 CDS 92710350 92712005 92710350 ID=Msa0965360-mRNA-1:cds;Parent=Msa0965360-mRNA-1
chr6_3 CDS 92712136 92712277 92712136 ID=Msa0965360-mRNA-1:cds;Parent=Msa0965360-mRNA-1
chr6_3 CDS 92712615 92713312 92712615 ID=Msa0965360-mRNA-1:cds;Parent=Msa0965360-mRNA-1
chr6_3 three_prime_UTR 92713313 92713616 92713313 ID=Msa0965360-mRNA-1:three_prime_utr;Parent=Msa0965360-mRNA-1
Gene Sequence

>Msa0965360

ATGTATAAACCATTTGTGACATGTGATGATCCAAAAGGAGTTGTTGAGTGTGGAAGTCTGAGGAGATATAGGTCAAATTCTCACAAAATGAAGGATAAGACAAAGTGCCGAAAGCCGGCCGAAAATTTAGAGACAAATAAACAAGACAAAGAAGAGAAGGTATCAAAAGGTTCAACAGAAAGAGATTTTGATCCATCTTCTTTGCAGCTTGTGGAGGTCTCTAGAGGTGCTGCAAAGTTGAACAACATGATTGAGTCGTGGTCTAGAGGTGTGAGGTACGATGGAAAATCCGATGATATTGCAAAGGATTTGTTAAAAGGCGCTCTTGATTTGCAAGAGTCTCTAGAGATGCTTCGTAAGGTGCAAGAAGCTTCGAATAGTATGGGTCGATTGAAGAGAAGACAAGAGGAGAAACATGAAAGAAGTAAAATTGATGCAAATGTGAATGATGGAAATAGATCAACACATTCTAATCAATTTTTTGAACACAATTCAGCTTATGGCTCTTCAAGTAGTTGTAGAGAGGAACTTAAGAAAGTGATTAAGGAGAGTTTGGTTCGACAAAATCTATTCCAAAGCACAAGCACTTCTGAAGGATTGGATTCAGCTTCAGCAGCATTCCCTTCTACAAGCTCAAGTCAATCTTCTGTTGTTTGGTATGACAAACTTTCGGATTCTTCATGTTCACCAACTTTTTCAAGGAAGGAAAAAAGTACCAATCTTGTTGCAAGGTTGATGGGATTAGAACAATCCCCTTCAAGAACATTTCCATCTGTTATGCAAAAACAGTCGGAGAATCAAAAGATTGTGAATCAGAAGAGACCTGTGTTCGAGATTGACACACCGAAGGTAAGAAAGCATAGTTCAATATTTGAGAATCCAGAAAGAGAGAAGACACTAAGGGAAATTCTTGAAACTACTCATTTCAATGGATTGTTAAAGAGTAGTCCTATTAGAGAGCACAGGCTTCGTAATCATGTCAATCATTCAAATGATCTTCATTATGAACAGTTTGATGATTTACCACCGATTGTACTCATGAAACCTCGGCGCGCTTCGTATCAGGAGTTCGTAGAAACGTACGAGCCGGTTCCTCGAGAAGAGTTTTCCTTTAGAAATCCAAAAGCAAAAGGAGTTCCTTCAAAAACCTTCAAACCAAGGGAAGGTTCAACTACCAACATGAGAAAAGAGATGATGGAAGAAAATCTATCCAAAAAGTTTATCAAAGAGGAGAGATCGAAGCGCGTCAACGAGTTTTTGGAATATGATGTGAAAGAAATCAAGGCTGTTGAAAGCAAGAAGGTTCAAAAAGCTAGTCATAGATCACAAGCAAGTGAAACAGTTGATGAAAAAGCCAAGGTAAAGAACATTACAATTCTCAGAAAACCGATACAAAAGGAGGTTTCAAAAGCTAAAATTGTGGCAAAAGCTCAAGATCAAGGCGAAATCAGGTCTAGTAGTGAAAAGTTGAGAAAGCCGCGAAGTGTGTCGAGGATTGAGAAGAATGAGATTCCATCTAGAAAGAGCATTTCATCAAATTCAAATACTACCATCACAAAACCAAAGACACAAAAGGTTAACAGTTCAAAGGAATTGAGAAAGAGTCAGATGAAGAAGCAAATATCTGTTGATTTGCCTGAAGCAGCTAAACCTATTGATGAAAAATTAAAGCAAGAAGAAGGAATGAGTTTCGGTGTTTCTTGTAAAGATGATTGTGCTGAGATTAAAATAATCACTACAGTAACAGAAGATCTCATCGTGGAAGATGAAGTAGACACCTATGCAAATAAGACTAGAGATAATTGCGAGGAGGGCCAGAATTCTTCAGTTGATGATGTTTTGATGTTAAATTGTGAGCATGAAAATGATACCATCCTTGCTGAGGAAGCTCGTGACACCACCAGCGTCAGTGAAACTTGTTTCAATCAAGACAAAGACATTGCTGACACCGTCTGTATCGGTGAAACCGATTTCGAGCCAGACAAAGACACTTCTGAGCTGAAATATTTGCTTCTAACCAGCAAATCATTTATTGACCATGCAGATGAGTTTCTCAATCTTGATATTGGTTATCCTAAGATCCTACCAAAGATTGAAACTAATGGAATATCCAATACAAGACTCTATTTGGATTGCGCGAACGAACTCGCTGAGAGAAAAAGCCTTCAAGAGTCATCACAGTTAGTTCACCCCTTATTGCTAACTTGTGTAGGGAATTCAAGATTGCAAATCTCTTTGGGAAGTTTGGTTGAAGAAATCAACAATGCAATTGACAGTCTTACATCTTACAGTGAAAATTCTGAGACTAAACTTATTTTGGATAATATTTGTGCAATGTTGGAGAGAGATATGAAGTGCAACAATAGGTTGATAAATGGAATGTGGAACTGTGGTTGGAGGCATGGATTTTCTTGTGATGAAGCTGAACAAGCTGTTAATGAAGTAGAAAACATGATTTTAGGTGGATTAATTGAGGAGATTATTGTAAATTTATGA

Protein sequence

>Msa0965360

MYKPFVTCDDPKGVVECGSLRRYRSNSHKMKDKTKCRKPAENLETNKQDKEEKVSKGSTERDFDPSSLQLVEVSRGAAKLNNMIESWSRGVRYDGKSDDIAKDLLKGALDLQESLEMLRKVQEASNSMGRLKRRQEEKHERSKIDANVNDGNRSTHSNQFFEHNSAYGSSSSCREELKKVIKESLVRQNLFQSTSTSEGLDSASAAFPSTSSSQSSVVWYDKLSDSSCSPTFSRKEKSTNLVARLMGLEQSPSRTFPSVMQKQSENQKIVNQKRPVFEIDTPKVRKHSSIFENPEREKTLREILETTHFNGLLKSSPIREHRLRNHVNHSNDLHYEQFDDLPPIVLMKPRRASYQEFVETYEPVPREEFSFRNPKAKGVPSKTFKPREGSTTNMRKEMMEENLSKKFIKEERSKRVNEFLEYDVKEIKAVESKKVQKASHRSQASETVDEKAKVKNITILRKPIQKEVSKAKIVAKAQDQGEIRSSSEKLRKPRSVSRIEKNEIPSRKSISSNSNTTITKPKTQKVNSSKELRKSQMKKQISVDLPEAAKPIDEKLKQEEGMSFGVSCKDDCAEIKIITTVTEDLIVEDEVDTYANKTRDNCEEGQNSSVDDVLMLNCEHENDTILAEEARDTTSVSETCFNQDKDIADTVCIGETDFEPDKDTSELKYLLLTSKSFIDHADEFLNLDIGYPKILPKIETNGISNTRLYLDCANELAERKSLQESSQLVHPLLLTCVGNSRLQISLGSLVEEINNAIDSLTSYSENSETKLILDNICAMLERDMKCNNRLINGMWNCGWRHGFSCDEAEQAVNEVENMILGGLIEEIIVNL*