AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0999870


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0999870 MtrunA17_Chr6g0485881 94.585 831 45 0 1 831 1 831 0.0 1598
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0999870 AT3G24630.1 41.463 205 102 8 1 198 10 203 4.00e-27 118
Msa0999870 AT3G24630.2 41.463 205 102 8 1 198 10 203 4.00e-27 118

Find 162 sgRNAs with CRISPR-Local

Find 244 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTAGTGTCTTCTCTCTTTC+TGG 0.005612 6_4:+82332205 None:intergenic
TTCTGAGACTAAACTTATTT+TGG 0.076991 6_4:-82330320 Msa0999870:CDS
GAAACTTCTCAAAATATTTC+TGG 0.113763 6_4:-82333874 Msa0999870:five_prime_UTR
ATCCAATACAAGACTCTATT+TGG 0.158315 6_4:-82330509 Msa0999870:CDS
TCAATCTTTGGTAGGATCTT+AGG 0.207375 6_4:+82330544 None:intergenic
TTCAAGATTGCAAATCTCTT+TGG 0.228602 6_4:-82330401 Msa0999870:CDS
GGAACTTAAGAAAGTGATTA+AGG 0.234384 6_4:-82332560 Msa0999870:CDS
ATTGCAAAGGATTTGTTAAA+AGG 0.236779 6_4:-82332787 Msa0999870:CDS
TTTGAACACAATTCAGCTTA+TGG 0.266042 6_4:-82332604 Msa0999870:CDS
ATTCCATTAGTTTCAATCTT+TGG 0.272555 6_4:+82330532 None:intergenic
GAAAGTGATTAAGGAGAGTT+TGG 0.281612 6_4:-82332551 Msa0999870:CDS
GCAAATCTCTTTGGGAAGTT+TGG 0.283823 6_4:-82330392 Msa0999870:CDS
CCACACTCAACAACTCCTTT+TGG 0.288999 6_4:+82333054 None:intergenic
CCCTACACAAGTTAGCAATA+AGG 0.311630 6_4:+82330426 None:intergenic
GCAAGAAGCTTCGAATAGTA+TGG 0.317136 6_4:-82332722 Msa0999870:CDS
TTCACCTTGTATATATAATA+AGG 0.318783 6_4:-82329871 Msa0999870:three_prime_UTR
CTTCAGAAGTGCTTGTGCTT+TGG 0.319474 6_4:+82332512 None:intergenic
TGCAACAATAGGTTGATAAA+TGG 0.321009 6_4:-82330262 Msa0999870:CDS
CATCATCAACTGAAGAATTC+TGG 0.321444 6_4:+82330803 None:intergenic
CCTACACAAGTTAGCAATAA+GGG 0.324395 6_4:+82330427 None:intergenic
ACAATAGGTTTAGCTGCTTC+AGG 0.328588 6_4:+82331449 None:intergenic
GATTGACTTGAGCTTGTAGA+AGG 0.330319 6_4:+82332463 None:intergenic
GGTGAAGATGCTGATATCTA+AGG 0.331132 6_4:+82329888 None:intergenic
TGAACCTTCCCTTGGTTTGA+AGG 0.332725 6_4:+82331937 None:intergenic
CAAGTCAATCTTCTGTTGTT+TGG 0.332774 6_4:-82332450 Msa0999870:CDS
GAGTTTCTCAATCTTGATAT+TGG 0.338989 6_4:-82330571 Msa0999870:CDS
CGAAGCCTGTGCTCTCTAAT+AGG 0.344717 6_4:+82332136 None:intergenic
GAACAGCTGAAAGAAAATAA+AGG 0.349906 6_4:-82333740 Msa0999870:five_prime_UTR
GATGAAATGCTCTTTCTAGA+TGG 0.352127 6_4:+82331572 None:intergenic
AGCTCAGAAGTGTCTTTGTC+TGG 0.357390 6_4:+82330640 None:intergenic
CTACCAAAGATTGAAACTAA+TGG 0.362800 6_4:-82330535 Msa0999870:CDS
GGATATACAGCCCTTAGTTA+TGG 0.365845 6_4:-82330100 Msa0999870:three_prime_UTR
TCAAGATTGCAAATCTCTTT+GGG 0.367770 6_4:-82330400 Msa0999870:CDS
AAACTTCTCAAAATATTTCT+GGG 0.375703 6_4:-82333873 Msa0999870:five_prime_UTR
CTCAAGATCAAGGCGAAATC+AGG 0.377524 6_4:-82331655 Msa0999870:CDS
CTTGAAACTACTCATTTCAA+TGG 0.383813 6_4:-82332175 Msa0999870:CDS
TCCATCTTCTTTGCAGCTTG+TGG 0.385624 6_4:-82332893 Msa0999870:CDS
CTTACATGATCTTGTCCTCT+TGG 0.386518 6_4:+82333246 None:intergenic
GTCTTTGTCTGGCTCGAAAT+CGG 0.387248 6_4:+82330651 None:intergenic
CAATCTTGTTGCAAGGTTGA+TGG 0.390483 6_4:-82332368 Msa0999870:CDS
TCTGTGACAGAATATTTCTA+AGG 0.402815 6_4:-82333115 Msa0999870:intron
ACAGCCCTTAGTTATGGATC+TGG 0.405068 6_4:-82330094 Msa0999870:three_prime_UTR
CACAAGCACTTCTGAAGGAT+TGG 0.417407 6_4:-82332506 Msa0999870:CDS
ATGGTCAATAAATGATTTGC+TGG 0.418671 6_4:+82330600 None:intergenic
GAAAACTCTTCTCGAGGAAC+CGG 0.426957 6_4:+82331998 None:intergenic
GTGGAAGTCTGAGGAGATAT+AGG 0.427056 6_4:-82333035 Msa0999870:CDS
GAACTATGCTTTCTTACCTT+CGG 0.429427 6_4:+82332241 None:intergenic
ACAGCAAGTGATGGTGTGTT+TGG 0.433244 6_4:+82334027 None:intergenic
AACAGCTGAAAGAAAATAAA+GGG 0.436214 6_4:-82333739 Msa0999870:intron
GAGATATGAAGTGCAACAAT+AGG 0.438346 6_4:-82330273 Msa0999870:CDS
TGTTTGGTATGACAAACTTT+CGG 0.440918 6_4:-82332434 Msa0999870:CDS
ATCCAAATAGAGTCTTGTAT+TGG 0.447170 6_4:+82330507 None:intergenic
TCAATCCTCGACACACTTCG+CGG 0.449222 6_4:+82331608 None:intergenic
CAAGAAGAAGGAATGAGTTT+CGG 0.458989 6_4:-82331283 Msa0999870:CDS
TTTAGAAATCCAAAAGCAAA+AGG 0.462194 6_4:-82331974 Msa0999870:CDS
CAGAAAGAGAGAAGACACTA+AGG 0.462255 6_4:-82332204 Msa0999870:CDS
AATTGTAATGTTCTTTACCT+TGG 0.464078 6_4:+82331730 None:intergenic
ACAGATGGAAATGTTCTTGA+AGG 0.464421 6_4:+82332331 None:intergenic
TTGGTAGTTGAACCTTCCCT+TGG 0.465370 6_4:+82331929 None:intergenic
AATCTTGTTGCAAGGTTGAT+GGG 0.467441 6_4:-82332367 Msa0999870:CDS
GGATCATCACATGTCACAAA+TGG 0.467560 6_4:+82333075 None:intergenic
GGATAATATTTGTGCAATGT+TGG 0.470489 6_4:-82330299 Msa0999870:CDS
CATCAACCTTGCAACAAGAT+TGG 0.470581 6_4:+82332369 None:intergenic
CCCTTATTGCTAACTTGTGT+AGG 0.479938 6_4:-82330427 Msa0999870:CDS
CAAATCCTTTGCAATATCAT+CGG 0.484517 6_4:+82332795 None:intergenic
CTAACTGTGATGACTCTTGA+AGG 0.485315 6_4:+82330455 None:intergenic
ATCTTCTTTGCAGCTTGTGG+AGG 0.488367 6_4:-82332890 Msa0999870:CDS
ATTGATGCAAATGTGAATGA+TGG 0.489421 6_4:-82332655 Msa0999870:CDS
CAACATGAGAAAAGAGATGA+TGG 0.491361 6_4:-82331909 Msa0999870:CDS
GTCAAATTCTCACAAAATGA+AGG 0.492656 6_4:-82333013 Msa0999870:CDS
AAAGAAGAGAAGGTATCAAA+AGG 0.495584 6_4:-82332937 Msa0999870:CDS
TCCACAAGCTGCAAAGAAGA+TGG 0.495903 6_4:+82332892 None:intergenic
CCGATCAAGATCGGAAGGAC+TGG 0.502887 6_4:+82329963 None:intergenic
AACACAACATCATTTGTACT+TGG 0.505310 6_4:-82334140 Msa0999870:five_prime_UTR
TGCACGTAGTCAGCCACATC+AGG 0.507609 6_4:+82329935 None:intergenic
ACAACCCAGATCCATAACTA+AGG 0.507724 6_4:+82330089 None:intergenic
CAGCCCTTAGTTATGGATCT+GGG 0.510574 6_4:-82330093 Msa0999870:three_prime_UTR
CCTTATTGCTAACTTGTGTA+GGG 0.510663 6_4:-82330426 Msa0999870:CDS
CATTAGTTTCAATCTTTGGT+AGG 0.513835 6_4:+82330536 None:intergenic
TAAGACAAAGTGCCGAAAGC+CGG 0.516544 6_4:-82332989 Msa0999870:CDS
ATGGAATGTGGAACTGTGGT+TGG 0.517006 6_4:-82330243 Msa0999870:CDS
CACAAAACCAAAGACACAAA+AGG 0.518586 6_4:-82331531 Msa0999870:CDS
CTGATTAGACTGTTTAGATG+TGG 0.518894 6_4:+82330042 None:intergenic
CGAGGTTTCATGAGTACAAT+CGG 0.522887 6_4:+82332058 None:intergenic
TCTCAGAAAACCGATACAAA+AGG 0.524589 6_4:-82331708 Msa0999870:CDS
ACCTCTAGTCTTATTTGCAT+AGG 0.528727 6_4:+82331177 None:intergenic
GAAAGTACAGATTTGAAGAT+CGG 0.534078 6_4:-82330020 Msa0999870:three_prime_UTR
CAGCTTGTGGAGGTCTCTAG+AGG 0.534580 6_4:-82332880 Msa0999870:CDS
TAGTCCTTATTATATATACA+AGG 0.535662 6_4:+82329867 None:intergenic
GTGGCAAAAGCTCAAGATCA+AGG 0.536217 6_4:-82331665 Msa0999870:CDS
GTAGTCCTATTAGAGAGCAC+AGG 0.539680 6_4:-82332141 Msa0999870:CDS
TTTGCAGATAATTGCGAGGA+GGG 0.540057 6_4:-82330826 Msa0999870:intron
TGGAACTGTGGTTGGAGGCA+TGG 0.542412 6_4:-82330235 Msa0999870:CDS
CAGATGGAAATGTTCTTGAA+GGG 0.547681 6_4:+82332332 None:intergenic
TCCTTCCGATCTTGATCGGA+CGG 0.552448 6_4:-82329959 Msa0999870:three_prime_UTR
AGGTGTGGTGAGGTGAATGA+AGG 0.556999 6_4:+82334209 None:intergenic
CCAGTCCTTCCGATCTTGAT+CGG 0.559187 6_4:-82329963 Msa0999870:three_prime_UTR
CAAAGCACAAGCACTTCTGA+AGG 0.559925 6_4:-82332511 Msa0999870:CDS
GTCTCTAGAGATGCTTCGTA+AGG 0.563353 6_4:-82332746 Msa0999870:CDS
CTAGAAGAAATTCAGATCCA+AGG 0.563507 6_4:+82333929 None:intergenic
TATGGATCTGGGTTGTGTGC+GGG 0.564068 6_4:-82330082 Msa0999870:three_prime_UTR
ACGAGCTTCCTCAGCAAGGA+TGG 0.565299 6_4:+82330747 None:intergenic
CAGGACCGTCCGATCAAGAT+CGG 0.569220 6_4:+82329954 None:intergenic
TAGAAGAAATTCAGATCCAA+GGG 0.569514 6_4:+82333930 None:intergenic
AAAGTACCAATCTTGTTGCA+AGG 0.570805 6_4:-82332375 Msa0999870:CDS
CAACTCTTCTATCCTTCCTG+TGG 0.571879 6_4:+82329835 None:intergenic
TAAACAAGACAAAGAAGAGA+AGG 0.573687 6_4:-82332947 Msa0999870:CDS
GTGAAGATGCTGATATCTAA+GGG 0.579426 6_4:+82329889 None:intergenic
AGATGGAAATGTTCTTGAAG+GGG 0.581235 6_4:+82332333 None:intergenic
CAAGAAGCTTCGAATAGTAT+GGG 0.582027 6_4:-82332721 Msa0999870:CDS
ATGATTGAGTCGTGGTCTAG+AGG 0.582241 6_4:-82332838 Msa0999870:CDS
ATATGATGTGAAAGAAATCA+AGG 0.588240 6_4:-82331822 Msa0999870:CDS
ATTGACTTGAGCTTGTAGAA+GGG 0.591382 6_4:+82332464 None:intergenic
ACAAAAGGTTAACAGTTCAA+AGG 0.591951 6_4:-82331516 Msa0999870:CDS
AAAACCTTCAAACCAAGGGA+AGG 0.592501 6_4:-82331941 Msa0999870:CDS
ATTGCTGACACCGTCTGTAT+CGG 0.594229 6_4:-82330679 Msa0999870:CDS
GAAACAAGTTTCACTGACGC+TGG 0.594603 6_4:+82330717 None:intergenic
TTGATCGGACGGTCCTGATG+TGG 0.597073 6_4:-82329948 Msa0999870:three_prime_UTR
GGTGTGTCAATCTCGAACAC+AGG 0.598187 6_4:+82332262 None:intergenic
CTAAAGGAAAACTCTTCTCG+AGG 0.598786 6_4:+82331992 None:intergenic
ATAGGTTGATAAATGGAATG+TGG 0.600587 6_4:-82330255 Msa0999870:CDS
ACCGTCCGATCAAGATCGGA+AGG 0.601177 6_4:+82329958 None:intergenic
TCTAGAGGTGTGAGGTACGA+TGG 0.603601 6_4:-82332823 Msa0999870:CDS
TTATGGATCTGGGTTGTGTG+CGG 0.610047 6_4:-82330083 Msa0999870:three_prime_UTR
CTCTTCAAGTAGTTGTAGAG+AGG 0.610288 6_4:-82332581 Msa0999870:CDS
GAATGTGGAACTGTGGTTGG+AGG 0.612560 6_4:-82330240 Msa0999870:CDS
AGAAAGAGAGAAGACACTAA+GGG 0.612920 6_4:-82332203 Msa0999870:CDS
GATTGAGAAACTCATCTGCA+TGG 0.613355 6_4:+82330581 None:intergenic
CAACCCAGATCCATAACTAA+GGG 0.615587 6_4:+82330090 None:intergenic
AAAATCCGATGATATTGCAA+AGG 0.617942 6_4:-82332800 Msa0999870:CDS
CAAGGCTGTTGAAAGCAAGA+AGG 0.619477 6_4:-82331804 Msa0999870:CDS
TCGATTGAAGAGAAGACAAG+AGG 0.624969 6_4:-82332698 Msa0999870:CDS
CAGAAAACCGATACAAAAGG+AGG 0.626337 6_4:-82331705 Msa0999870:CDS
GTGACATGTGATGATCCAAA+AGG 0.628008 6_4:-82333069 Msa0999870:CDS
CCAAAAGGAGTTGTTGAGTG+TGG 0.631426 6_4:-82333054 Msa0999870:CDS
GAAGAGACAGTGTCACAAAG+TGG 0.633083 6_4:+82334231 None:intergenic
ACCTATGCAAATAAGACTAG+AGG 0.635482 6_4:-82331178 Msa0999870:intron
CTACACAAGTTAGCAATAAG+GGG 0.636387 6_4:+82330428 None:intergenic
GAAAGCCGCGAAGTGTGTCG+AGG 0.637298 6_4:-82331613 Msa0999870:CDS
CGATTGTACTCATGAAACCT+CGG 0.638305 6_4:-82332057 Msa0999870:CDS
AAATGATACCATCCTTGCTG+AGG 0.642227 6_4:-82330755 Msa0999870:CDS
GACAAATTGTAAGATCCAAG+AGG 0.644894 6_4:-82333261 Msa0999870:five_prime_UTR
TTGTTGAGTGTGGAAGTCTG+AGG 0.647195 6_4:-82333044 Msa0999870:CDS
AGGACTAAGAAATTGACCAC+AGG 0.651037 6_4:-82329851 Msa0999870:three_prime_UTR
GGTTTCAAAAGCTAAAATTG+TGG 0.654649 6_4:-82331684 Msa0999870:CDS
AGAAATTCAGATCCAAGGGG+GGG 0.658785 6_4:+82333934 None:intergenic
TGTCACGAGCTTCCTCAGCA+AGG 0.661150 6_4:+82330743 None:intergenic
ACATACAAAGAGGTGTGGTG+AGG 0.663808 6_4:+82334199 None:intergenic
ATCGGTTTCACCGATACAGA+CGG 0.665581 6_4:+82330669 None:intergenic
ATAAATGGAATGTGGAACTG+TGG 0.666233 6_4:-82330247 Msa0999870:CDS
ATCATGTGAATGAAGTTGCG+TGG 0.666706 6_4:-82334262 Msa0999870:five_prime_UTR
AAGAAATTCAGATCCAAGGG+GGG 0.667273 6_4:+82333933 None:intergenic
CTAAGAAATTGACCACAGGA+AGG 0.671875 6_4:-82329847 Msa0999870:three_prime_UTR
TGAACAACATGATTGAGTCG+TGG 0.687574 6_4:-82332846 Msa0999870:CDS
GAAGAAATTCAGATCCAAGG+GGG 0.698712 6_4:+82333932 None:intergenic
TAAGGGATTTGAAACGTGTG+CGG 0.700220 6_4:+82329906 None:intergenic
GTTCGAGATTGACACACCGA+AGG 0.719145 6_4:-82332257 Msa0999870:CDS
AGTCGTGGTCTAGAGGTGTG+AGG 0.724136 6_4:-82332831 Msa0999870:CDS
GGTTTCATGAGTACAATCGG+TGG 0.732087 6_4:+82332061 None:intergenic
AGAAGAAATTCAGATCCAAG+GGG 0.734722 6_4:+82333931 None:intergenic
ACAAGTTTCACTGACGCTGG+TGG 0.738203 6_4:+82330720 None:intergenic
AGTAACAGAAGATCTCATCG+TGG 0.778770 6_4:-82331215 Msa0999870:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTTTTTTAGTGTGTTTT+TGG - chr6_4:82330461-82330480 Msa0999870:CDS 15.0%
!! GAAATTTCATAAAATAACTT+AGG + chr6_4:82330983-82331002 None:intergenic 15.0%
!!! TTTATTTGTCTCTAAATTTT+CGG + chr6_4:82331153-82331172 None:intergenic 15.0%
!!! TTATATATTTTGAGACATTT+TGG - chr6_4:82333995-82334014 Msa0999870:five_prime_UTR 15.0%
!! AGATTATGAAAGTGAAAAAT+GGG + chr6_4:82330019-82330038 None:intergenic 20.0%
!! AAGATTATGAAAGTGAAAAA+TGG + chr6_4:82330020-82330039 None:intergenic 20.0%
!! AAACTTCTCAAAATATTTCT+GGG - chr6_4:82330243-82330262 Msa0999870:CDS 20.0%
!!! ATCAGTTTTTGATGAATATT+AGG - chr6_4:82330549-82330568 Msa0999870:CDS 20.0%
!! AAACATTAGCAAATTGTTAA+TGG - chr6_4:82330677-82330696 Msa0999870:CDS 20.0%
!! ATAGAGACTGATTAATATAA+TGG - chr6_4:82330786-82330805 Msa0999870:CDS 20.0%
!!! TCATTTTTTTTTTGTCTCTA+TGG - chr6_4:82332701-82332720 Msa0999870:CDS 20.0%
!!! TAAATTTCTAAAATTGTCAC+TGG - chr6_4:82332961-82332980 Msa0999870:CDS 20.0%
!! TTATACTATTTATCCAAACA+GGG + chr6_4:82332998-82333017 None:intergenic 20.0%
!! ATTATACTATTTATCCAAAC+AGG + chr6_4:82332999-82333018 None:intergenic 20.0%
!! CATATAAGTTCTTATGTATA+TGG - chr6_4:82333045-82333064 Msa0999870:CDS 20.0%
!! TTCACCTTGTATATATAATA+AGG - chr6_4:82334245-82334264 Msa0999870:five_prime_UTR 20.0%
!! TAGTCCTTATTATATATACA+AGG + chr6_4:82334252-82334271 None:intergenic 20.0%
! TTCCAAAAAAACATACAAAG+AGG + chr6_4:82329930-82329949 None:intergenic 25.0%
! AGTGAAAAATGGGAAAAAAT+GGG + chr6_4:82330009-82330028 None:intergenic 25.0%
! AAGTGAAAAATGGGAAAAAA+TGG + chr6_4:82330010-82330029 None:intergenic 25.0%
! GAAACTTCTCAAAATATTTC+TGG - chr6_4:82330242-82330261 Msa0999870:CDS 25.0%
!! TTTTTCATGAATTTCTCAAG+TGG - chr6_4:82330305-82330324 Msa0999870:CDS 25.0%
!! TTTTCATGAATTTCTCAAGT+GGG - chr6_4:82330306-82330325 Msa0999870:CDS 25.0%
! AACAGCTGAAAGAAAATAAA+GGG - chr6_4:82330377-82330396 Msa0999870:CDS 25.0%
!! GCTTCTTTTTATGTGATTTT+TGG - chr6_4:82330432-82330451 Msa0999870:CDS 25.0%
!!! CTTTTTGTTTGTTTCTTTCT+AGG - chr6_4:82330742-82330761 Msa0999870:CDS 25.0%
!!! TATAATGGTTTTTGTTTCAG+TGG - chr6_4:82330801-82330820 Msa0999870:CDS 25.0%
!!! ATAATGGTTTTTGTTTCAGT+GGG - chr6_4:82330802-82330821 Msa0999870:CDS 25.0%
!!! ATTGCAAAGGATTTGTTAAA+AGG - chr6_4:82331329-82331348 Msa0999870:intron 25.0%
!!! TTTTGCTTTTGGATTTCTAA+AGG + chr6_4:82332143-82332162 None:intergenic 25.0%
! TTTAGAAATCCAAAAGCAAA+AGG - chr6_4:82332142-82332161 Msa0999870:CDS 25.0%
! ATCCAAAAAGTTTATCAAAG+AGG - chr6_4:82332240-82332259 Msa0999870:CDS 25.0%
! ATATGATGTGAAAGAAATCA+AGG - chr6_4:82332294-82332313 Msa0999870:CDS 25.0%
! AATTGTAATGTTCTTTACCT+TGG + chr6_4:82332389-82332408 None:intergenic 25.0%
! ATGACAGTAAAACTTACAAT+AGG + chr6_4:82332685-82332704 None:intergenic 25.0%
! TATCTTGCATAAAAGAGTTT+AGG - chr6_4:82332750-82332769 Msa0999870:CDS 25.0%
! AATGAATTGAAACTCATTGA+AGG + chr6_4:82332784-82332803 None:intergenic 25.0%
! GAAAAATTAAAGCAAGAAGA+AGG - chr6_4:82332821-82332840 Msa0999870:CDS 25.0%
! TGCTTCTAATAATCTAACAA+GGG + chr6_4:82333218-82333237 None:intergenic 25.0%
! TATCATCACACTGAATAAAT+TGG - chr6_4:82333242-82333261 Msa0999870:intron 25.0%
!! ATTCCATTAGTTTCAATCTT+TGG + chr6_4:82333587-82333606 None:intergenic 25.0%
!!! TTCTGAGACTAAACTTATTT+TGG - chr6_4:82333796-82333815 Msa0999870:five_prime_UTR 25.0%
!! GAAGTAGAAAACATGATTTT+AGG - chr6_4:82333938-82333957 Msa0999870:five_prime_UTR 25.0%
AAAAAACATACAAAGAGGTG+TGG + chr6_4:82329925-82329944 None:intergenic 30.0%
!!! CACCTCTTTGTATGTTTTTT+TGG - chr6_4:82329925-82329944 Msa0999870:three_prime_UTR 30.0%
AACACAACATCATTTGTACT+TGG - chr6_4:82329976-82329995 Msa0999870:three_prime_UTR 30.0%
! AAAATGGGAAAAAATGGGTT+TGG + chr6_4:82330004-82330023 None:intergenic 30.0%
TAGAAGAAATTCAGATCCAA+GGG + chr6_4:82330189-82330208 None:intergenic 30.0%
! CTTTTTCTCATGGTTTTTTG+AGG - chr6_4:82330336-82330355 Msa0999870:CDS 30.0%
GAACAGCTGAAAGAAAATAA+AGG - chr6_4:82330376-82330395 Msa0999870:CDS 30.0%
TAAAAAGAAGCTGTAATCCA+TGG + chr6_4:82330423-82330442 None:intergenic 30.0%
!! TGCTGCTTTAAGAATCTATT+TGG - chr6_4:82330654-82330673 Msa0999870:CDS 30.0%
! TTTGTTTGTTTCTTTCTAGG+TGG - chr6_4:82330745-82330764 Msa0999870:CDS 30.0%
! TTGTTTGTTTCTTTCTAGGT+GGG - chr6_4:82330746-82330765 Msa0999870:CDS 30.0%
! TCTGTGACAGAATATTTCTA+AGG - chr6_4:82331001-82331020 Msa0999870:intron 30.0%
GTCAAATTCTCACAAAATGA+AGG - chr6_4:82331103-82331122 Msa0999870:intron 30.0%
TAAACAAGACAAAGAAGAGA+AGG - chr6_4:82331169-82331188 Msa0999870:intron 30.0%
!! AAAGAAGAGAAGGTATCAAA+AGG - chr6_4:82331179-82331198 Msa0999870:CDS 30.0%
AAAATCCGATGATATTGCAA+AGG - chr6_4:82331316-82331335 Msa0999870:intron 30.0%
CAAATCCTTTGCAATATCAT+CGG + chr6_4:82331324-82331343 None:intergenic 30.0%
ATTGATGCAAATGTGAATGA+TGG - chr6_4:82331461-82331480 Msa0999870:CDS 30.0%
TTTGAACACAATTCAGCTTA+TGG - chr6_4:82331512-82331531 Msa0999870:CDS 30.0%
GGAACTTAAGAAAGTGATTA+AGG - chr6_4:82331556-82331575 Msa0999870:CDS 30.0%
TGTTTGGTATGACAAACTTT+CGG - chr6_4:82331682-82331701 Msa0999870:CDS 30.0%
! TTTTCCTTCCTTGAAAAAGT+TGG + chr6_4:82331722-82331741 None:intergenic 30.0%
ATCTGTTATGCAAAAACAGT+CGG - chr6_4:82331802-82331821 Msa0999870:CDS 30.0%
CTTGAAACTACTCATTTCAA+TGG - chr6_4:82331941-82331960 Msa0999870:CDS 30.0%
TTCAAAAACCTTCAAACCAA+GGG - chr6_4:82332171-82332190 Msa0999870:CDS 30.0%
! CTCCTCTTTGATAAACTTTT+TGG + chr6_4:82332245-82332264 None:intergenic 30.0%
!! TTTGAAACCTCCTTTTGTAT+CGG + chr6_4:82332421-82332440 None:intergenic 30.0%
GGTTTCAAAAGCTAAAATTG+TGG - chr6_4:82332432-82332451 Msa0999870:CDS 30.0%
ACAAAAGGTTAACAGTTCAA+AGG - chr6_4:82332600-82332619 Msa0999870:CDS 30.0%
AATTCATTATTCTTGTGCAC+AGG - chr6_4:82332796-82332815 Msa0999870:CDS 30.0%
GTGCTTCTAATAATCTAACA+AGG + chr6_4:82333219-82333238 None:intergenic 30.0%
! ATGGTCAATAAATGATTTGC+TGG + chr6_4:82333519-82333538 None:intergenic 30.0%
GAGTTTCTCAATCTTGATAT+TGG - chr6_4:82333545-82333564 Msa0999870:intron 30.0%
! CATTAGTTTCAATCTTTGGT+AGG + chr6_4:82333583-82333602 None:intergenic 30.0%
CTACCAAAGATTGAAACTAA+TGG - chr6_4:82333581-82333600 Msa0999870:intron 30.0%
ATCCAATACAAGACTCTATT+TGG - chr6_4:82333607-82333626 Msa0999870:intron 30.0%
! ATCCAAATAGAGTCTTGTAT+TGG + chr6_4:82333612-82333631 None:intergenic 30.0%
TTCAAGATTGCAAATCTCTT+TGG - chr6_4:82333715-82333734 Msa0999870:intron 30.0%
TCAAGATTGCAAATCTCTTT+GGG - chr6_4:82333716-82333735 Msa0999870:intron 30.0%
GGATAATATTTGTGCAATGT+TGG - chr6_4:82333817-82333836 Msa0999870:five_prime_UTR 30.0%
!! TGCAACAATAGGTTGATAAA+TGG - chr6_4:82333854-82333873 Msa0999870:five_prime_UTR 30.0%
!! ATAGGTTGATAAATGGAATG+TGG - chr6_4:82333861-82333880 Msa0999870:five_prime_UTR 30.0%
! GTAGAAAACATGATTTTAGG+TGG - chr6_4:82333941-82333960 Msa0999870:five_prime_UTR 30.0%
!!! GATTTTAGGTGGATTAATTG+AGG - chr6_4:82333952-82333971 Msa0999870:five_prime_UTR 30.0%
! GAAAGTACAGATTTGAAGAT+CGG - chr6_4:82334096-82334115 Msa0999870:five_prime_UTR 30.0%
GCTTAAAAAACAGCAAGTGA+TGG + chr6_4:82330101-82330120 None:intergenic 35.0%
AGAAGAAATTCAGATCCAAG+GGG + chr6_4:82330188-82330207 None:intergenic 35.0%
CTAGAAGAAATTCAGATCCA+AGG + chr6_4:82330190-82330209 None:intergenic 35.0%
!! GGGTCATTTTCTTTTTCTCA+TGG - chr6_4:82330326-82330345 Msa0999870:CDS 35.0%
!!! TTCTCATGGTTTTTTGAGGT+TGG - chr6_4:82330340-82330359 Msa0999870:CDS 35.0%
! GTTTTGTGTTCATGAAACCA+TGG - chr6_4:82330403-82330422 Msa0999870:CDS 35.0%
GACAAATTGTAAGATCCAAG+AGG - chr6_4:82330855-82330874 Msa0999870:intron 35.0%
! TTTGTCTCTAAATTTTCGGC+CGG + chr6_4:82331149-82331168 None:intergenic 35.0%
CAAGAAGCTTCGAATAGTAT+GGG - chr6_4:82331395-82331414 Msa0999870:intron 35.0%
GAAAGTGATTAAGGAGAGTT+TGG - chr6_4:82331565-82331584 Msa0999870:CDS 35.0%
!! ATTGACTTGAGCTTGTAGAA+GGG + chr6_4:82331655-82331674 None:intergenic 35.0%
CAAGTCAATCTTCTGTTGTT+TGG - chr6_4:82331666-82331685 Msa0999870:CDS 35.0%
!!! CATGTTCACCAACTTTTTCA+AGG - chr6_4:82331711-82331730 Msa0999870:CDS 35.0%
!!! TTCACCAACTTTTTCAAGGA+AGG - chr6_4:82331715-82331734 Msa0999870:CDS 35.0%
! AAAGTACCAATCTTGTTGCA+AGG - chr6_4:82331741-82331760 Msa0999870:CDS 35.0%
! AATCTTGTTGCAAGGTTGAT+GGG - chr6_4:82331749-82331768 Msa0999870:CDS 35.0%
AGATGGAAATGTTCTTGAAG+GGG + chr6_4:82331786-82331805 None:intergenic 35.0%
CAGATGGAAATGTTCTTGAA+GGG + chr6_4:82331787-82331806 None:intergenic 35.0%
ACAGATGGAAATGTTCTTGA+AGG + chr6_4:82331788-82331807 None:intergenic 35.0%
!!! GACTGTTTTTGCATAACAGA+TGG + chr6_4:82331803-82331822 None:intergenic 35.0%
GAACTATGCTTTCTTACCTT+CGG + chr6_4:82331878-82331897 None:intergenic 35.0%
AGAAAGAGAGAAGACACTAA+GGG - chr6_4:82331913-82331932 Msa0999870:CDS 35.0%
!! CTTGGTTTGAAGGTTTTTGA+AGG + chr6_4:82332172-82332191 None:intergenic 35.0%
CTTCAAAAACCTTCAAACCA+AGG - chr6_4:82332170-82332189 Msa0999870:CDS 35.0%
! CATCATCTCTTTTCTCATGT+TGG + chr6_4:82332209-82332228 None:intergenic 35.0%
CAACATGAGAAAAGAGATGA+TGG - chr6_4:82332207-82332226 Msa0999870:CDS 35.0%
!! AACAGTTGATGAAAAAGCCA+AGG - chr6_4:82332369-82332388 Msa0999870:CDS 35.0%
TCTCAGAAAACCGATACAAA+AGG - chr6_4:82332408-82332427 Msa0999870:CDS 35.0%
GATGAAATGCTCTTTCTAGA+TGG + chr6_4:82332547-82332566 None:intergenic 35.0%
!!! TTGTGTCTTTGGTTTTGTGA+TGG + chr6_4:82332584-82332603 None:intergenic 35.0%
CACAAAACCAAAGACACAAA+AGG - chr6_4:82332585-82332604 Msa0999870:CDS 35.0%
! CTGTTAACCTTTTGTGTCTT+TGG + chr6_4:82332595-82332614 None:intergenic 35.0%
CAAGAAGAAGGAATGAGTTT+CGG - chr6_4:82332833-82332852 Msa0999870:CDS 35.0%
ACCTATGCAAATAAGACTAG+AGG - chr6_4:82332938-82332957 Msa0999870:CDS 35.0%
!! ACCTCTAGTCTTATTTGCAT+AGG + chr6_4:82332942-82332961 None:intergenic 35.0%
AATTGTCACTGGATACACTT+TGG - chr6_4:82332972-82332991 Msa0999870:CDS 35.0%
! TAATCTAACAAGGGCATGTT+TGG + chr6_4:82333209-82333228 None:intergenic 35.0%
CATCATCAACTGAAGAATTC+TGG + chr6_4:82333316-82333335 None:intergenic 35.0%
TCAATCTTTGGTAGGATCTT+AGG + chr6_4:82333575-82333594 None:intergenic 35.0%
CTACACAAGTTAGCAATAAG+GGG + chr6_4:82333691-82333710 None:intergenic 35.0%
CCTACACAAGTTAGCAATAA+GGG + chr6_4:82333692-82333711 None:intergenic 35.0%
! CCTTATTGCTAACTTGTGTA+GGG - chr6_4:82333690-82333709 Msa0999870:intron 35.0%
GAGATATGAAGTGCAACAAT+AGG - chr6_4:82333843-82333862 Msa0999870:five_prime_UTR 35.0%
ATAAATGGAATGTGGAACTG+TGG - chr6_4:82333869-82333888 Msa0999870:five_prime_UTR 35.0%
CTGATTAGACTGTTTAGATG+TGG + chr6_4:82334077-82334096 None:intergenic 35.0%
GTGAAGATGCTGATATCTAA+GGG + chr6_4:82334230-82334249 None:intergenic 35.0%
ATCATGTGAATGAAGTTGCG+TGG - chr6_4:82329854-82329873 Msa0999870:three_prime_UTR 40.0%
!!! GTGATGGTGTGTTTGGTTTT+TGG + chr6_4:82330085-82330104 None:intergenic 40.0%
AAGAAATTCAGATCCAAGGG+GGG + chr6_4:82330186-82330205 None:intergenic 40.0%
GAAGAAATTCAGATCCAAGG+GGG + chr6_4:82330187-82330206 None:intergenic 40.0%
CTTACATGATCTTGTCCTCT+TGG + chr6_4:82330873-82330892 None:intergenic 40.0%
GGATCATCACATGTCACAAA+TGG + chr6_4:82331044-82331063 None:intergenic 40.0%
GTGACATGTGATGATCCAAA+AGG - chr6_4:82331047-82331066 Msa0999870:intron 40.0%
TGAACAACATGATTGAGTCG+TGG - chr6_4:82331270-82331289 Msa0999870:CDS 40.0%
GCAAGAAGCTTCGAATAGTA+TGG - chr6_4:82331394-82331413 Msa0999870:intron 40.0%
TCGATTGAAGAGAAGACAAG+AGG - chr6_4:82331418-82331437 Msa0999870:intron 40.0%
CTCTTCAAGTAGTTGTAGAG+AGG - chr6_4:82331535-82331554 Msa0999870:CDS 40.0%
!! GATTGACTTGAGCTTGTAGA+AGG + chr6_4:82331656-82331675 None:intergenic 40.0%
CATCAACCTTGCAACAAGAT+TGG + chr6_4:82331750-82331769 None:intergenic 40.0%
CAATCTTGTTGCAAGGTTGA+TGG - chr6_4:82331748-82331767 Msa0999870:CDS 40.0%
CTTAGTGTCTTCTCTCTTTC+TGG + chr6_4:82331914-82331933 None:intergenic 40.0%
CAGAAAGAGAGAAGACACTA+AGG - chr6_4:82331912-82331931 Msa0999870:CDS 40.0%
CGAGGTTTCATGAGTACAAT+CGG + chr6_4:82332061-82332080 None:intergenic 40.0%
CGATTGTACTCATGAAACCT+CGG - chr6_4:82332059-82332078 Msa0999870:CDS 40.0%
CTAAAGGAAAACTCTTCTCG+AGG + chr6_4:82332127-82332146 None:intergenic 40.0%
! GAAGGAACTCCTTTTGCTTT+TGG + chr6_4:82332154-82332173 None:intergenic 40.0%
AAAACCTTCAAACCAAGGGA+AGG - chr6_4:82332175-82332194 Msa0999870:CDS 40.0%
CAGAAAACCGATACAAAAGG+AGG - chr6_4:82332411-82332430 Msa0999870:CDS 40.0%
ACAATAGGTTTAGCTGCTTC+AGG + chr6_4:82332670-82332689 None:intergenic 40.0%
AGTAACAGAAGATCTCATCG+TGG - chr6_4:82332901-82332920 Msa0999870:CDS 40.0%
GTCGATGAGCATCTCATAAA+CGG - chr6_4:82333140-82333159 Msa0999870:intron 40.0%
CCTCGCAATTATCTGCAAAA+GGG + chr6_4:82333289-82333308 None:intergenic 40.0%
TCCTCGCAATTATCTGCAAA+AGG + chr6_4:82333290-82333309 None:intergenic 40.0%
! TTTTGCAGATAATTGCGAGG+AGG - chr6_4:82333289-82333308 Msa0999870:five_prime_UTR 40.0%
TTTGCAGATAATTGCGAGGA+GGG - chr6_4:82333290-82333309 Msa0999870:five_prime_UTR 40.0%
AAATGATACCATCCTTGCTG+AGG - chr6_4:82333361-82333380 Msa0999870:intron 40.0%
GATTGAGAAACTCATCTGCA+TGG + chr6_4:82333538-82333557 None:intergenic 40.0%
CTAACTGTGATGACTCTTGA+AGG + chr6_4:82333664-82333683 None:intergenic 40.0%
! CCCTTATTGCTAACTTGTGT+AGG - chr6_4:82333689-82333708 Msa0999870:intron 40.0%
CCCTACACAAGTTAGCAATA+AGG + chr6_4:82333693-82333712 None:intergenic 40.0%
! GCAAATCTCTTTGGGAAGTT+TGG - chr6_4:82333724-82333743 Msa0999870:intron 40.0%
GGATATACAGCCCTTAGTTA+TGG - chr6_4:82334016-82334035 Msa0999870:five_prime_UTR 40.0%
CAACCCAGATCCATAACTAA+GGG + chr6_4:82334029-82334048 None:intergenic 40.0%
ACAACCCAGATCCATAACTA+AGG + chr6_4:82334030-82334049 None:intergenic 40.0%
! TAAGGGATTTGAAACGTGTG+CGG + chr6_4:82334213-82334232 None:intergenic 40.0%
GGTGAAGATGCTGATATCTA+AGG + chr6_4:82334231-82334250 None:intergenic 40.0%
AGGACTAAGAAATTGACCAC+AGG - chr6_4:82334265-82334284 Msa0999870:five_prime_UTR 40.0%
CTAAGAAATTGACCACAGGA+AGG - chr6_4:82334269-82334288 Msa0999870:five_prime_UTR 40.0%
GAAGAGACAGTGTCACAAAG+TGG + chr6_4:82329888-82329907 None:intergenic 45.0%
! ACATACAAAGAGGTGTGGTG+AGG + chr6_4:82329920-82329939 None:intergenic 45.0%
! ACAGCAAGTGATGGTGTGTT+TGG + chr6_4:82330092-82330111 None:intergenic 45.0%
! AAGGGGGGGTGTAGAAAAAA+GGG + chr6_4:82330171-82330190 None:intergenic 45.0%
AGAAATTCAGATCCAAGGGG+GGG + chr6_4:82330185-82330204 None:intergenic 45.0%
! CCACACTCAACAACTCCTTT+TGG + chr6_4:82331065-82331084 None:intergenic 45.0%
CCAAAAGGAGTTGTTGAGTG+TGG - chr6_4:82331062-82331081 Msa0999870:intron 45.0%
TTGTTGAGTGTGGAAGTCTG+AGG - chr6_4:82331072-82331091 Msa0999870:intron 45.0%
GTGGAAGTCTGAGGAGATAT+AGG - chr6_4:82331081-82331100 Msa0999870:intron 45.0%
!! TAAGACAAAGTGCCGAAAGC+CGG - chr6_4:82331127-82331146 Msa0999870:intron 45.0%
!! CTAAATTTTCGGCCGGCTTT+CGG + chr6_4:82331142-82331161 None:intergenic 45.0%
TCCATCTTCTTTGCAGCTTG+TGG - chr6_4:82331223-82331242 Msa0999870:CDS 45.0%
TCCACAAGCTGCAAAGAAGA+TGG + chr6_4:82331227-82331246 None:intergenic 45.0%
ATCTTCTTTGCAGCTTGTGG+AGG - chr6_4:82331226-82331245 Msa0999870:CDS 45.0%
ATGATTGAGTCGTGGTCTAG+AGG - chr6_4:82331278-82331297 Msa0999870:CDS 45.0%
! GTCTCTAGAGATGCTTCGTA+AGG - chr6_4:82331370-82331389 Msa0999870:intron 45.0%
!! CTTCAGAAGTGCTTGTGCTT+TGG + chr6_4:82331607-82331626 None:intergenic 45.0%
CAAAGCACAAGCACTTCTGA+AGG - chr6_4:82331605-82331624 Msa0999870:CDS 45.0%
! CACAAGCACTTCTGAAGGAT+TGG - chr6_4:82331610-82331629 Msa0999870:CDS 45.0%
! GTAGTCCTATTAGAGAGCAC+AGG - chr6_4:82331975-82331994 Msa0999870:CDS 45.0%
GGTTTCATGAGTACAATCGG+TGG + chr6_4:82332058-82332077 None:intergenic 45.0%
GAAAACTCTTCTCGAGGAAC+CGG + chr6_4:82332121-82332140 None:intergenic 45.0%
! TGAACCTTCCCTTGGTTTGA+AGG + chr6_4:82332182-82332201 None:intergenic 45.0%
! TTGGTAGTTGAACCTTCCCT+TGG + chr6_4:82332190-82332209 None:intergenic 45.0%
CAAGGCTGTTGAAAGCAAGA+AGG - chr6_4:82332312-82332331 Msa0999870:CDS 45.0%
GTGGCAAAAGCTCAAGATCA+AGG - chr6_4:82332451-82332470 Msa0999870:CDS 45.0%
CTCAAGATCAAGGCGAAATC+AGG - chr6_4:82332461-82332480 Msa0999870:CDS 45.0%
! CCCTTTTGCAGATAATTGCG+AGG - chr6_4:82333286-82333305 Msa0999870:five_prime_UTR 45.0%
GAAACAAGTTTCACTGACGC+TGG + chr6_4:82333402-82333421 None:intergenic 45.0%
ATTGCTGACACCGTCTGTAT+CGG - chr6_4:82333437-82333456 Msa0999870:intron 45.0%
! ATCGGTTTCACCGATACAGA+CGG + chr6_4:82333450-82333469 None:intergenic 45.0%
! GTCTTTGTCTGGCTCGAAAT+CGG + chr6_4:82333468-82333487 None:intergenic 45.0%
!! AGCTCAGAAGTGTCTTTGTC+TGG + chr6_4:82333479-82333498 None:intergenic 45.0%
ATGGAATGTGGAACTGTGGT+TGG - chr6_4:82333873-82333892 Msa0999870:five_prime_UTR 45.0%
ACAGCCCTTAGTTATGGATC+TGG - chr6_4:82334022-82334041 Msa0999870:five_prime_UTR 45.0%
CAGCCCTTAGTTATGGATCT+GGG - chr6_4:82334023-82334042 Msa0999870:five_prime_UTR 45.0%
TTATGGATCTGGGTTGTGTG+CGG - chr6_4:82334033-82334052 Msa0999870:five_prime_UTR 45.0%
AGGTGTGGTGAGGTGAATGA+AGG + chr6_4:82329910-82329929 None:intergenic 50.0%
! AGGGGGGGTGTAGAAAAAAG+GGG + chr6_4:82330170-82330189 None:intergenic 50.0%
! CAAGGGGGGGTGTAGAAAAA+AGG + chr6_4:82330172-82330191 None:intergenic 50.0%
!!! CTTTTTTCTACACCCCCCCT+TGG - chr6_4:82330170-82330189 Msa0999870:CDS 50.0%
! TCTAGAGGTGTGAGGTACGA+TGG - chr6_4:82331293-82331312 Msa0999870:CDS 50.0%
GGTGTGTCAATCTCGAACAC+AGG + chr6_4:82331857-82331876 None:intergenic 50.0%
GTTCGAGATTGACACACCGA+AGG - chr6_4:82331859-82331878 Msa0999870:CDS 50.0%
CGAAGCCTGTGCTCTCTAAT+AGG + chr6_4:82331983-82332002 None:intergenic 50.0%
GTTCGTAGAAACGTACGAGC+CGG - chr6_4:82332099-82332118 Msa0999870:CDS 50.0%
! GAAGCGCGTCAACGAGTTTT+TGG - chr6_4:82332270-82332289 Msa0999870:CDS 50.0%
TCAATCCTCGACACACTTCG+CGG + chr6_4:82332511-82332530 None:intergenic 50.0%
GGATACACTTTGGCCCTGTT+TGG - chr6_4:82332982-82333001 Msa0999870:CDS 50.0%
ACAAGTTTCACTGACGCTGG+TGG + chr6_4:82333399-82333418 None:intergenic 50.0%
GAATGTGGAACTGTGGTTGG+AGG - chr6_4:82333876-82333895 Msa0999870:five_prime_UTR 50.0%
TATGGATCTGGGTTGTGTGC+GGG - chr6_4:82334034-82334053 Msa0999870:five_prime_UTR 50.0%
CCAGTCCTTCCGATCTTGAT+CGG - chr6_4:82334153-82334172 Msa0999870:five_prime_UTR 50.0%
TCCTTCCGATCTTGATCGGA+CGG - chr6_4:82334157-82334176 Msa0999870:five_prime_UTR 50.0%
! GGGGGGGTGTAGAAAAAAGG+GGG + chr6_4:82330169-82330188 None:intergenic 55.0%
CAGCTTGTGGAGGTCTCTAG+AGG - chr6_4:82331236-82331255 Msa0999870:CDS 55.0%
! AGTCGTGGTCTAGAGGTGTG+AGG - chr6_4:82331285-82331304 Msa0999870:CDS 55.0%
ACGAGCTTCCTCAGCAAGGA+TGG + chr6_4:82333372-82333391 None:intergenic 55.0%
TGTCACGAGCTTCCTCAGCA+AGG + chr6_4:82333376-82333395 None:intergenic 55.0%
TGGAACTGTGGTTGGAGGCA+TGG - chr6_4:82333881-82333900 Msa0999870:five_prime_UTR 55.0%
CCGATCAAGATCGGAAGGAC+TGG + chr6_4:82334156-82334175 None:intergenic 55.0%
ACCGTCCGATCAAGATCGGA+AGG + chr6_4:82334161-82334180 None:intergenic 55.0%
CAGGACCGTCCGATCAAGAT+CGG + chr6_4:82334165-82334184 None:intergenic 55.0%
TTGATCGGACGGTCCTGATG+TGG - chr6_4:82334168-82334187 Msa0999870:five_prime_UTR 55.0%
TGCACGTAGTCAGCCACATC+AGG + chr6_4:82334184-82334203 None:intergenic 55.0%
GAAAGCCGCGAAGTGTGTCG+AGG - chr6_4:82332503-82332522 Msa0999870:CDS 60.0%
ACCTCGGCGCGCTTCGTATC+AGG - chr6_4:82332075-82332094 Msa0999870:CDS 65.0%
TCCTGATACGAAGCGCGCCG+AGG + chr6_4:82332079-82332098 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 82329840 82334298 82329840 ID=Msa0999870;Name=Msa0999870
chr6_4 mRNA 82329840 82334298 82329840 ID=Msa0999870-mRNA-1;Parent=Msa0999870;Name=Msa0999870-mRNA-1;_AED=0.01;_eAED=0.01;_QI=647|1|1|1|0.5|0.4|5|304|831
chr6_4 exon 82329840 82330841 82329840 ID=Msa0999870-mRNA-1:exon:15810;Parent=Msa0999870-mRNA-1
chr6_4 exon 82331179 82331320 82331179 ID=Msa0999870-mRNA-1:exon:15809;Parent=Msa0999870-mRNA-1
chr6_4 exon 82331451 82333127 82331451 ID=Msa0999870-mRNA-1:exon:15808;Parent=Msa0999870-mRNA-1
chr6_4 exon 82333251 82333317 82333251 ID=Msa0999870-mRNA-1:exon:15807;Parent=Msa0999870-mRNA-1
chr6_4 exon 82333740 82334298 82333740 ID=Msa0999870-mRNA-1:exon:15806;Parent=Msa0999870-mRNA-1
chr6_4 five_prime_UTR 82333740 82334298 82333740 ID=Msa0999870-mRNA-1:five_prime_utr;Parent=Msa0999870-mRNA-1
chr6_4 five_prime_UTR 82333251 82333317 82333251 ID=Msa0999870-mRNA-1:five_prime_utr;Parent=Msa0999870-mRNA-1
chr6_4 five_prime_UTR 82333107 82333127 82333107 ID=Msa0999870-mRNA-1:five_prime_utr;Parent=Msa0999870-mRNA-1
chr6_4 CDS 82331451 82333106 82331451 ID=Msa0999870-mRNA-1:cds;Parent=Msa0999870-mRNA-1
chr6_4 CDS 82331179 82331320 82331179 ID=Msa0999870-mRNA-1:cds;Parent=Msa0999870-mRNA-1
chr6_4 CDS 82330144 82330841 82330144 ID=Msa0999870-mRNA-1:cds;Parent=Msa0999870-mRNA-1
chr6_4 three_prime_UTR 82329840 82330143 82329840 ID=Msa0999870-mRNA-1:three_prime_utr;Parent=Msa0999870-mRNA-1
Gene Sequence

>Msa0999870

ATGTATAAACCATTTGTGACATGTGATGATCCAAAAGGAGTTGTTGAGTGTGGAAGTCTGAGGAGATATAGGTCAAATTCTCACAAAATGAAGGATAAGACAAAGTGCCGAAAGCCGGCCGAAAATTTAGAGACAAATAAACAAGACAAAGAAGAGAAGGTATCAAAAGGTTCAACAGAAAGAGATTTTGATCCATCTTCTTTGCAGCTTGTGGAGGTCTCTAGAGGTGCTGCAAAGTTGAACAACATGATTGAGTCGTGGTCTAGAGGTGTGAGGTACGATGGAAAATCCGATGATATTGCAAAGGATTTGTTAAAAGGCGCTCTTGATTTGCAAGAGTCTCTAGAGATGCTTCGTAAGGTGCAAGAAGCTTCGAATAGTATGGGTCGATTGAAGAGAAGACAAGAGGAGAAACATGAAAGAAGTAAAATTGATGCAAATGTGAATGATGGAAATAGATCAACACATTCTAATCAATTTTTTGAACACAATTCAGCTTATGGCTCTTCAAGTAGTTGTAGAGAGGAACTTAAGAAAGTGATTAAGGAGAGTTTGGTTCGACAAAATCTATTCCAAAGCACAAGCACTTCTGAAGGATTGGATTCAGCTTCAGCAGCATTCCCTTCTACAAGCTCAAGTCAATCTTCTGTTGTTTGGTATGACAAACTTTCGGATTCTTCATGTTCACCAACTTTTTCAAGGAAGGAAAAAAGTACCAATCTTGTTGCAAGGTTGATGGGATTAGAACAATCCCCTTCAAGAACATTTCCATCTGTTATGCAAAAACAGTCGGAGAATCAAAAGATTGTGAATCAGAAGAGACCTGTGTTCGAGATTGACACACCGAAGGTAAGAAAGCATAGTTCAATATTTGAGAATCCAGAAAGAGAGAAGACACTAAGGGAAATTCTTGAAACTACTCATTTCAATGGATTGTTAAAGAGTAGTCCTATTAGAGAGCACAGGCTTCGTAATCATGTCAATCATTCAAATGATCTTCATTATGAACAGTTTGATGATTTACCACCGATTGTACTCATGAAACCTCGGCGCGCTTCGTATCAGGAGTTCGTAGAAACGTACGAGCCGGTTCCTCGAGAAGAGTTTTCCTTTAGAAATCCAAAAGCAAAAGGAGTTCCTTCAAAAACCTTCAAACCAAGGGAAGGTTCAACTACCAACATGAGAAAAGAGATGATGGAAGAAAATCTATCCAAAAAGTTTATCAAAGAGGAGAGATCGAAGCGCGTCAACGAGTTTTTGGAATATGATGTGAAAGAAATCAAGGCTGTTGAAAGCAAGAAGGTTCAAAAAGCTAGTCATAGATCACAAGCAAGTGAAACAGTTGATGAAAAAGCCAAGGTAAAGAACATTACAATTCTCAGAAAACCGATACAAAAGGAGGTTTCAAAAGCTAAAATTGTGGCAAAAGCTCAAGATCAAGGCGAAATCAGGTCTAGTAGTGAAAAGTTGAGAAAGCCGCGAAGTGTGTCGAGGATTGAGAAGAATGAGATTCCATCTAGAAAGAGCATTTCATCAAATTCAAATACTACCATCACAAAACCAAAGACACAAAAGGTTAACAGTTCAAAGGAATTGAGAAAGAGTCAGATGAAGAAGCAAATATCTGTTGATTTGCCTGAAGCAGCTAAACCTATTGATGAAAAATTAAAGCAAGAAGAAGGAATGAGTTTCGGTGTTTCTTGTAAAGATGATTGTGCTGAGATTAAAATAATCACTACAGTAACAGAAGATCTCATCGTGGAAGATGAAGTAGACACCTATGCAAATAAGACTAGAGATAATTGCGAGGAGGGCCAGAATTCTTCAGTTGATGATGTTTTGATGTTAAATTGTGAGCATGAAAATGATACCATCCTTGCTGAGGAAGCTCGTGACACCACCAGCGTCAGTGAAACTTGTTTCAATCAAGACAAAGACATTGCTGACACCGTCTGTATCGGTGAAACCGATTTCGAGCCAGACAAAGACACTTCTGAGCTGAAATATTTGCTTCTAACCAGCAAATCATTTATTGACCATGCAGATGAGTTTCTCAATCTTGATATTGGTTATCCTAAGATCCTACCAAAGATTGAAACTAATGGAATATCCAATACAAGACTCTATTTGGATTGCGCGAACGAACTCGCTGAGAGAAAAAGCCTTCAAGAGTCATCACAGTTAGTTCACCCCTTATTGCTAACTTGTGTAGGGAATTCAAGATTGCAAATCTCTTTGGGAAGTTTGGTTGAAGAAATCAACAATGCAATTGACAGTCTTACATCTTACAGTGAAAATTCTGAGACTAAACTTATTTTGGATAATATTTGTGCAATGTTGGAGAGAGATATGAAGTGCAACAATAGGTTGATAAATGGAATGTGGAACTGTGGTTGGAGGCATGGATTTTCTTGTGATGAAGCTGAACAAGCTGTTAATGAAGTAGAAAACATGATTTTAGGTGGATTAATTGAGGAGATTATTGTAAATTTATGA

Protein sequence

>Msa0999870

MYKPFVTCDDPKGVVECGSLRRYRSNSHKMKDKTKCRKPAENLETNKQDKEEKVSKGSTERDFDPSSLQLVEVSRGAAKLNNMIESWSRGVRYDGKSDDIAKDLLKGALDLQESLEMLRKVQEASNSMGRLKRRQEEKHERSKIDANVNDGNRSTHSNQFFEHNSAYGSSSSCREELKKVIKESLVRQNLFQSTSTSEGLDSASAAFPSTSSSQSSVVWYDKLSDSSCSPTFSRKEKSTNLVARLMGLEQSPSRTFPSVMQKQSENQKIVNQKRPVFEIDTPKVRKHSSIFENPEREKTLREILETTHFNGLLKSSPIREHRLRNHVNHSNDLHYEQFDDLPPIVLMKPRRASYQEFVETYEPVPREEFSFRNPKAKGVPSKTFKPREGSTTNMRKEMMEENLSKKFIKEERSKRVNEFLEYDVKEIKAVESKKVQKASHRSQASETVDEKAKVKNITILRKPIQKEVSKAKIVAKAQDQGEIRSSSEKLRKPRSVSRIEKNEIPSRKSISSNSNTTITKPKTQKVNSSKELRKSQMKKQISVDLPEAAKPIDEKLKQEEGMSFGVSCKDDCAEIKIITTVTEDLIVEDEVDTYANKTRDNCEEGQNSSVDDVLMLNCEHENDTILAEEARDTTSVSETCFNQDKDIADTVCIGETDFEPDKDTSELKYLLLTSKSFIDHADEFLNLDIGYPKILPKIETNGISNTRLYLDCANELAERKSLQESSQLVHPLLLTCVGNSRLQISLGSLVEEINNAIDSLTSYSENSETKLILDNICAMLERDMKCNNRLINGMWNCGWRHGFSCDEAEQAVNEVENMILGGLIEEIIVNL*