Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1310310 | XP_039684805.1 | 84.328 | 536 | 37 | 3 | 22 | 512 | 1 | 534 | 0.0 | 856 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1310310 | sp|O80792|RH33_ARATH | 47.170 | 106 | 43 | 3 | 72 | 170 | 76 | 175 | 1.86e-18 | 92.4 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1310310 | A0A396GJF6 | 84.328 | 536 | 37 | 3 | 22 | 512 | 1 | 534 | 0.0 | 856 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000500 | Msa1310310 | 0.811123 | 8.193807e-51 | -8.615850e-47 |
Msa0005690 | Msa1310310 | 0.801012 | 1.100342e-48 | -8.615850e-47 |
Msa0034340 | Msa1310310 | 0.820812 | 5.628677e-53 | -8.615850e-47 |
Msa0045660 | Msa1310310 | 0.816674 | 4.897334e-52 | -8.615850e-47 |
Msa0046360 | Msa1310310 | 0.818885 | 1.551726e-52 | -8.615850e-47 |
Msa0046670 | Msa1310310 | 0.825297 | 5.061550e-54 | -8.615850e-47 |
Msa0047470 | Msa1310310 | 0.801785 | 7.641609e-49 | -8.615850e-47 |
Msa0057740 | Msa1310310 | 0.801437 | 9.010129e-49 | -8.615850e-47 |
Msa0059590 | Msa1310310 | 0.831421 | 1.685772e-55 | -8.615850e-47 |
Msa0062750 | Msa1310310 | 0.809700 | 1.662078e-50 | -8.615850e-47 |
Msa0074760 | Msa1310310 | 0.808299 | 3.315388e-50 | -8.615850e-47 |
Msa0083160 | Msa1310310 | 0.853376 | 2.490143e-61 | -8.615850e-47 |
Msa0096510 | Msa1310310 | 0.801792 | 7.618651e-49 | -8.615850e-47 |
Msa0103060 | Msa1310310 | 0.800760 | 1.239094e-48 | -8.615850e-47 |
Msa0615850 | Msa1310310 | 0.806148 | 9.467582e-50 | -8.615850e-47 |
Msa0622690 | Msa1310310 | 0.806677 | 7.323312e-50 | -8.615850e-47 |
Msa0623270 | Msa1310310 | 0.818771 | 1.647590e-52 | -8.615850e-47 |
Msa0625310 | Msa1310310 | 0.808715 | 2.702733e-50 | -8.615850e-47 |
Msa0626890 | Msa1310310 | 0.813312 | 2.727996e-51 | -8.615850e-47 |
Msa0639030 | Msa1310310 | 0.810847 | 9.401890e-51 | -8.615850e-47 |
Msa0645780 | Msa1310310 | 0.801078 | 1.067075e-48 | -8.615850e-47 |
Msa0646390 | Msa1310310 | 0.868828 | 4.884487e-66 | -8.615850e-47 |
Msa0654060 | Msa1310310 | 0.812510 | 4.089107e-51 | -8.615850e-47 |
Msa0668160 | Msa1310310 | 0.828534 | 8.523140e-55 | -8.615850e-47 |
Msa0678240 | Msa1310310 | 0.822716 | 2.041225e-53 | -8.615850e-47 |
Msa0685880 | Msa1310310 | 0.814836 | 1.257702e-51 | -8.615850e-47 |
Msa0690720 | Msa1310310 | 0.827086 | 1.899527e-54 | -8.615850e-47 |
Msa0697600 | Msa1310310 | 0.805126 | 1.551528e-49 | -8.615850e-47 |
Msa0698900 | Msa1310310 | 0.814252 | 1.693917e-51 | -8.615850e-47 |
Msa0726610 | Msa1310310 | 0.814342 | 1.617736e-51 | -8.615850e-47 |
Msa0736930 | Msa1310310 | 0.800881 | 1.170332e-48 | -8.615850e-47 |
Msa0749900 | Msa1310310 | 0.804711 | 1.894546e-49 | -8.615850e-47 |
Msa0752580 | Msa1310310 | 0.802713 | 4.924263e-49 | -8.615850e-47 |
Msa0754500 | Msa1310310 | 0.801135 | 1.038576e-48 | -8.615850e-47 |
Msa0756480 | Msa1310310 | 0.803958 | 2.718676e-49 | -8.615850e-47 |
Msa0790830 | Msa1310310 | 0.817692 | 2.889635e-52 | -8.615850e-47 |
Msa0792170 | Msa1310310 | 0.811812 | 5.804651e-51 | -8.615850e-47 |
Msa0804930 | Msa1310310 | 0.805212 | 1.488994e-49 | -8.615850e-47 |
Msa0808420 | Msa1310310 | 0.834244 | 3.352543e-56 | -8.615850e-47 |
Msa0824140 | Msa1310310 | 0.809981 | 1.446555e-50 | -8.615850e-47 |
Msa0830120 | Msa1310310 | 0.805108 | 1.565253e-49 | -8.615850e-47 |
Msa0830450 | Msa1310310 | 0.804526 | 2.070791e-49 | -8.615850e-47 |
Msa0836200 | Msa1310310 | 0.823616 | 1.258660e-53 | -8.615850e-47 |
Msa0131390 | Msa1310310 | 0.845102 | 5.005116e-59 | -8.615850e-47 |
Msa0133880 | Msa1310310 | 0.803781 | 2.959493e-49 | -8.615850e-47 |
Msa0162030 | Msa1310310 | 0.813223 | 2.853200e-51 | -8.615850e-47 |
Msa0162070 | Msa1310310 | 0.812172 | 4.847014e-51 | -8.615850e-47 |
Msa0175530 | Msa1310310 | 0.813962 | 1.962559e-51 | -8.615850e-47 |
Msa0177490 | Msa1310310 | 0.842679 | 2.231379e-58 | -8.615850e-47 |
Msa0185550 | Msa1310310 | 0.808410 | 3.139652e-50 | -8.615850e-47 |
Msa0206940 | Msa1310310 | 0.803267 | 3.783024e-49 | -8.615850e-47 |
Msa0213650 | Msa1310310 | 0.800221 | 1.595278e-48 | -8.615850e-47 |
Msa0226800 | Msa1310310 | 0.803216 | 3.874964e-49 | -8.615850e-47 |
Msa1226600 | Msa1310310 | 0.811830 | 5.754183e-51 | -8.615850e-47 |
Msa1229660 | Msa1310310 | 0.823862 | 1.101895e-53 | -8.615850e-47 |
Msa1230190 | Msa1310310 | 0.820716 | 5.920064e-53 | -8.615850e-47 |
Msa1245310 | Msa1310310 | 0.844949 | 5.506015e-59 | -8.615850e-47 |
Msa1292620 | Msa1310310 | 0.801294 | 9.635557e-49 | -8.615850e-47 |
Msa1309910 | Msa1310310 | 0.833268 | 5.878529e-56 | -8.615850e-47 |
Msa1310310 | Msa1310340 | 0.875718 | 2.469785e-68 | -8.615850e-47 |
Msa1310310 | Msa1316720 | 0.815342 | 9.708938e-52 | -8.615850e-47 |
Msa1310310 | Msa1319440 | 0.820073 | 8.316569e-53 | -8.615850e-47 |
Msa1310310 | Msa1319520 | 0.814287 | 1.663509e-51 | -8.615850e-47 |
Msa1310310 | Msa1319720 | 0.803899 | 2.796764e-49 | -8.615850e-47 |
Msa1310310 | Msa1333430 | 0.811683 | 6.194064e-51 | -8.615850e-47 |
Msa1310310 | Msa1349360 | 0.819135 | 1.361190e-52 | -8.615850e-47 |
Msa1310310 | Msa1352820 | 0.800415 | 1.457010e-48 | -8.615850e-47 |
Msa1310310 | Msa1357380 | 0.804914 | 1.718807e-49 | -8.615850e-47 |
Msa1310310 | Msa1366620 | 0.800032 | 1.743511e-48 | -8.615850e-47 |
Msa1310310 | Msa1366700 | 0.818507 | 1.890977e-52 | -8.615850e-47 |
Msa1310310 | Msa1371840 | 0.821650 | 3.607543e-53 | -8.615850e-47 |
Msa1310310 | Msa1384980 | 0.832899 | 7.262871e-56 | -8.615850e-47 |
Msa1310310 | Msa1392680 | 0.809665 | 1.691556e-50 | -8.615850e-47 |
Msa1310310 | Msa1397110 | 0.804948 | 1.690593e-49 | -8.615850e-47 |
Msa1310310 | Msa1397540 | 0.811139 | 8.129907e-51 | -8.615850e-47 |
Msa1310310 | Msa1408190 | 0.820655 | 6.114312e-53 | -8.615850e-47 |
Msa1310310 | Msa1431240 | 0.801203 | 1.006091e-48 | -8.615850e-47 |
Msa1310310 | Msa1432250 | 0.820079 | 8.289010e-53 | -8.615850e-47 |
Msa1310310 | Msa1435470 | 0.831782 | 1.373188e-55 | -8.615850e-47 |
Msa1310310 | Msa1435910 | 0.851309 | 9.653289e-61 | -8.615850e-47 |
Msa1310310 | Msa1437650 | 0.807215 | 5.636934e-50 | -8.615850e-47 |
Msa1310310 | Msa1440180 | 0.805466 | 1.317227e-49 | -8.615850e-47 |
Msa1310310 | Msa1440980 | 0.819310 | 1.242346e-52 | -8.615850e-47 |
Msa1310310 | Msa1448990 | 0.820336 | 7.240513e-53 | -8.615850e-47 |
Msa1310310 | Msa1449740 | 0.804299 | 2.308784e-49 | -8.615850e-47 |
Msa1310310 | Msa1458920 | 0.811679 | 6.206981e-51 | -8.615850e-47 |
Msa1310310 | Msa1459630 | 0.801393 | 9.197770e-49 | -8.615850e-47 |
Msa0365870 | Msa1310310 | 0.822561 | 2.218106e-53 | -8.615850e-47 |
Msa0387790 | Msa1310310 | 0.809063 | 2.277332e-50 | -8.615850e-47 |
Msa0413740 | Msa1310310 | 0.806812 | 6.858160e-50 | -8.615850e-47 |
Msa0414070 | Msa1310310 | 0.803969 | 2.705160e-49 | -8.615850e-47 |
Msa0421100 | Msa1310310 | 0.803054 | 4.186773e-49 | -8.615850e-47 |
Msa0423110 | Msa1310310 | 0.814924 | 1.202346e-51 | -8.615850e-47 |
Msa0423600 | Msa1310310 | 0.800856 | 1.184533e-48 | -8.615850e-47 |
Msa0440110 | Msa1310310 | 0.809614 | 1.734224e-50 | -8.615850e-47 |
Msa0469270 | Msa1310310 | 0.827666 | 1.379119e-54 | -8.615850e-47 |
Msa0473450 | Msa1310310 | 0.822747 | 2.007914e-53 | -8.615850e-47 |
Msa0476150 | Msa1310310 | 0.808914 | 2.450478e-50 | -8.615850e-47 |
Msa0476180 | Msa1310310 | 0.817604 | 3.024993e-52 | -8.615850e-47 |
Msa0981730 | Msa1310310 | 0.805817 | 1.111269e-49 | -8.615850e-47 |
Msa1016110 | Msa1310310 | 0.814560 | 1.447668e-51 | -8.615850e-47 |
Msa1028720 | Msa1310310 | 0.805573 | 1.250852e-49 | -8.615850e-47 |
Msa1033160 | Msa1310310 | 0.812967 | 3.246866e-51 | -8.615850e-47 |
Msa1069300 | Msa1310310 | 0.800745 | 1.248033e-48 | -8.615850e-47 |
Msa1069450 | Msa1310310 | 0.800908 | 1.155956e-48 | -8.615850e-47 |
Msa1072350 | Msa1310310 | 0.802831 | 4.653914e-49 | -8.615850e-47 |
Msa1072640 | Msa1310310 | 0.817146 | 3.835847e-52 | -8.615850e-47 |
Msa1080430 | Msa1310310 | 0.812872 | 3.406124e-51 | -8.615850e-47 |
Msa1080470 | Msa1310310 | 0.818618 | 1.784626e-52 | -8.615850e-47 |
Msa1081700 | Msa1310310 | 0.821854 | 3.236435e-53 | -8.615850e-47 |
Msa1102180 | Msa1310310 | 0.806730 | 7.136443e-50 | -8.615850e-47 |
Msa0270610 | Msa1310310 | 0.825005 | 5.933896e-54 | -8.615850e-47 |
Msa0301300 | Msa1310310 | 0.821501 | 3.904374e-53 | -8.615850e-47 |
Msa0304870 | Msa1310310 | 0.823103 | 1.658392e-53 | -8.615850e-47 |
Msa0329060 | Msa1310310 | 0.801457 | 8.922159e-49 | -8.615850e-47 |
Msa0341260 | Msa1310310 | 0.821313 | 4.313870e-53 | -8.615850e-47 |
Msa1130650 | Msa1310310 | 0.843469 | 1.375014e-58 | -8.615850e-47 |
Msa1140010 | Msa1310310 | 0.800086 | 1.699287e-48 | -8.615850e-47 |
Msa1166280 | Msa1310310 | 0.800976 | 1.119558e-48 | -8.615850e-47 |
Msa1182400 | Msa1310310 | 0.816298 | 5.942880e-52 | -8.615850e-47 |
Msa1183730 | Msa1310310 | 0.840914 | 6.523297e-58 | -8.615850e-47 |
Msa1196600 | Msa1310310 | 0.811882 | 5.605586e-51 | -8.615850e-47 |
Msa1208250 | Msa1310310 | 0.804718 | 1.888459e-49 | -8.615850e-47 |
Msa1211070 | Msa1310310 | 0.848307 | 6.660930e-60 | -8.615850e-47 |
Msa1211110 | Msa1310310 | 0.852561 | 4.259386e-61 | -8.615850e-47 |
Msa0505390 | Msa1310310 | 0.806378 | 8.467380e-50 | -8.615850e-47 |
Msa0507190 | Msa1310310 | 0.803057 | 4.180567e-49 | -8.615850e-47 |
Msa0509540 | Msa1310310 | 0.804400 | 2.199846e-49 | -8.615850e-47 |
Msa0511890 | Msa1310310 | 0.821661 | 3.586383e-53 | -8.615850e-47 |
Msa0512310 | Msa1310310 | 0.813301 | 2.742748e-51 | -8.615850e-47 |
Msa0542040 | Msa1310310 | 0.819070 | 1.408384e-52 | -8.615850e-47 |
Msa0549740 | Msa1310310 | 0.826695 | 2.355570e-54 | -8.615850e-47 |
Msa0553520 | Msa1310310 | 0.824218 | 9.093077e-54 | -8.615850e-47 |
Msa0579610 | Msa1310310 | 0.811064 | 8.439482e-51 | -8.615850e-47 |
Msa0595160 | Msa1310310 | 0.814264 | 1.683331e-51 | -8.615850e-47 |
Msa0861480 | Msa1310310 | 0.800594 | 1.339493e-48 | -8.615850e-47 |
Msa0863250 | Msa1310310 | 0.813570 | 2.394267e-51 | -8.615850e-47 |
Msa0868040 | Msa1310310 | 0.808420 | 3.124151e-50 | -8.615850e-47 |
Msa0883430 | Msa1310310 | 0.806995 | 6.274211e-50 | -8.615850e-47 |
Msa0883660 | Msa1310310 | 0.814161 | 1.773989e-51 | -8.615850e-47 |
Msa0934830 | Msa1310310 | 0.806884 | 6.623134e-50 | -8.615850e-47 |
Msa0950410 | Msa1310310 | 0.809885 | 1.516919e-50 | -8.615850e-47 |
Msa0964680 | Msa1310310 | 0.800211 | 1.602949e-48 | -8.615850e-47 |
Msa0971860 | Msa1310310 | 0.810911 | 9.105958e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1310310 | MtrunA17_Chr8g0337131 | 84.328 | 536 | 37 | 3 | 22 | 512 | 1 | 534 | 0.0 | 856 |
Msa1310310 | MtrunA17_Chr8g0337201 | 83.582 | 536 | 41 | 3 | 22 | 512 | 1 | 534 | 0.0 | 848 |
Msa1310310 | MtrunA17_Chr8g0386451 | 44.118 | 102 | 53 | 1 | 72 | 173 | 31 | 128 | 4.82e-19 | 90.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1310310 | AT2G37920.1 | 80.282 | 142 | 28 | 0 | 64 | 205 | 42 | 183 | 7.15e-82 | 255 |
Msa1310310 | AT2G07750.1 | 47.170 | 106 | 43 | 3 | 72 | 170 | 76 | 175 | 1.89e-19 | 92.4 |
Msa1310310 | AT1G63250.1 | 47.000 | 100 | 52 | 1 | 72 | 170 | 26 | 125 | 9.27e-19 | 90.5 |
Find 175 sgRNAs with CRISPR-Local
Find 390 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAGAGTTGCTTGGCCTTCT+TGG | 0.077587 | 8_4:+6960674 | None:intergenic |
TCTTCTTCTCCTTTGAATTA+TGG | 0.136407 | 8_4:-6960261 | Msa1310310:CDS |
ATTATTCTTCTTTGAATTCT+AGG | 0.168750 | 8_4:-6959933 | Msa1310310:CDS |
CTTCTTCTCCTTTGAATTAT+GGG | 0.214225 | 8_4:-6960260 | Msa1310310:CDS |
CAGATAAAAGTTAAACAAAT+TGG | 0.214579 | 8_4:-6960946 | Msa1310310:intron |
AGATACCGAAATTTATGATA+TGG | 0.227787 | 8_4:-6959500 | Msa1310310:CDS |
AGCCTGGTGGGTTTGACCTT+TGG | 0.261376 | 8_4:-6960482 | Msa1310310:CDS |
TGATGAGCAGCTCAAGGTTT+TGG | 0.278740 | 8_4:-6960520 | Msa1310310:CDS |
TTTATTCCAAAGGGTGTAGA+TGG | 0.302620 | 8_4:-6959856 | Msa1310310:CDS |
ATGAGAGTAGGTATTCATTA+GGG | 0.307314 | 8_4:-6959984 | Msa1310310:CDS |
ATACTATGAACAACCCCTTT+AGG | 0.307915 | 8_4:+6960396 | None:intergenic |
TCATATTATTAGCTGTAGTA+TGG | 0.316274 | 8_4:+6960907 | None:intergenic |
CAAACCCATATCATAAATTT+CGG | 0.327120 | 8_4:+6959495 | None:intergenic |
GATGGCAATTTCGGGAATAA+AGG | 0.329120 | 8_4:-6959778 | Msa1310310:CDS |
GTTAATGGGTCTAATCATAA+TGG | 0.336810 | 8_4:-6959646 | Msa1310310:CDS |
TTTATGTCAAAGGATGTTAA+TGG | 0.339335 | 8_4:-6959661 | Msa1310310:CDS |
AATGAGAGTAGGTATTCATT+AGG | 0.350069 | 8_4:-6959985 | Msa1310310:CDS |
GATACCGAAATTTATGATAT+GGG | 0.353338 | 8_4:-6959499 | Msa1310310:CDS |
GGTGATGCTGTTAGGTCTAA+TGG | 0.357522 | 8_4:-6959727 | Msa1310310:CDS |
CTGCTAGGTACTTTCCTAAA+GGG | 0.358672 | 8_4:-6960410 | Msa1310310:CDS |
TCCATTGCAGGCAGGAGATA+TGG | 0.367211 | 8_4:-6959574 | Msa1310310:CDS |
ATTCTTCTCATTTGAGTACT+AGG | 0.372736 | 8_4:-6960044 | Msa1310310:CDS |
TCTCTGAGTTGGAGAGGCCT+TGG | 0.375598 | 8_4:-6960584 | Msa1310310:CDS |
CTAGCAGAAGGCAACTCATC+AGG | 0.379311 | 8_4:+6960426 | None:intergenic |
CTCTGAGTTGGAGAGGCCTT+GGG | 0.383541 | 8_4:-6960583 | Msa1310310:CDS |
TCACTAGTAACCTTCATATA+AGG | 0.389583 | 8_4:+6960369 | None:intergenic |
CCAACAATGGTGATGCTGTT+AGG | 0.391142 | 8_4:-6959735 | Msa1310310:CDS |
AGAGGGAGTAATTCCATTGC+AGG | 0.400461 | 8_4:-6959586 | Msa1310310:CDS |
GGATTGAGAAAGAACGGAAA+TGG | 0.400821 | 8_4:-6960096 | Msa1310310:CDS |
ACCCCACCCGGGTACGTCCT+TGG | 0.402692 | 8_4:+6960726 | None:intergenic |
AGAAGAATGTTCCCCATCAT+TGG | 0.409792 | 8_4:+6960059 | None:intergenic |
ATGGCAATTTCGGGAATAAA+GGG | 0.411540 | 8_4:-6959777 | Msa1310310:CDS |
CTTGAAGGCGCGACTGTGCC+GGG | 0.412431 | 8_4:-6960655 | Msa1310310:CDS |
GCTTTGATAGAGAACAACTT+AGG | 0.416712 | 8_4:+6960543 | None:intergenic |
CCTAACAGCATCACCATTGT+TGG | 0.423179 | 8_4:+6959735 | None:intergenic |
TGCCACTTGGACACCCCACC+CGG | 0.423897 | 8_4:+6960714 | None:intergenic |
TTGGAAGATGGTGGCGGTGA+AGG | 0.425938 | 8_4:-6960321 | Msa1310310:CDS |
TCTTGAAGGCGCGACTGTGC+CGG | 0.426312 | 8_4:-6960656 | Msa1310310:CDS |
GAAGGCCAAGCAACTCTTGA+AGG | 0.427019 | 8_4:-6960670 | Msa1310310:CDS |
TGGTGGGCCAAGGACGTACC+CGG | 0.430275 | 8_4:-6960733 | Msa1310310:CDS |
GGCAGTCGATTGCGAAAGAA+TGG | 0.430627 | 8_4:-6960219 | Msa1310310:CDS |
GCCAAGGACGTACCCGGGTG+GGG | 0.432059 | 8_4:-6960727 | Msa1310310:CDS |
GCTGATAGGTTTCAGAAGCC+TGG | 0.437802 | 8_4:-6960498 | Msa1310310:CDS |
TGATGACTTGTTGGTGGAAC+CGG | 0.438809 | 8_4:-6960349 | Msa1310310:CDS |
GTTGGTGGAACCGGATGTTT+TGG | 0.441447 | 8_4:-6960340 | Msa1310310:CDS |
TTGAATGGCAGAACAAGAAC+AGG | 0.441966 | 8_4:-6960821 | Msa1310310:CDS |
TTATGTCAAAGGATGTTAAT+GGG | 0.444096 | 8_4:-6959660 | Msa1310310:CDS |
AGGAGGTATCGGTCCAATGA+TGG | 0.447789 | 8_4:-6960072 | Msa1310310:CDS |
GTGGGGTGTCCAAGTGGCAG+TGG | 0.448779 | 8_4:-6960710 | Msa1310310:CDS |
GTTGGAGAGGCCTTGGGAGG+TGG | 0.450649 | 8_4:-6960577 | Msa1310310:CDS |
GGGCCAAGGACGTACCCGGG+TGG | 0.452437 | 8_4:-6960729 | Msa1310310:CDS |
TCCTTGGCCCACCACCCATT+CGG | 0.453379 | 8_4:+6960742 | None:intergenic |
GATTGAGAAAGAACGGAAAT+GGG | 0.453467 | 8_4:-6960095 | Msa1310310:CDS |
GAATAATGATCTTCATTGTC+TGG | 0.454399 | 8_4:+6959949 | None:intergenic |
TCCGACCCATCTACACCCTT+TGG | 0.454564 | 8_4:+6959850 | None:intergenic |
CTTTGATAGAGAACAACTTA+GGG | 0.454597 | 8_4:+6960544 | None:intergenic |
ATGGTGGCGGTGAAGGGTAT+TGG | 0.462116 | 8_4:-6960314 | Msa1310310:CDS |
AGATCGAGGAGGAAGGAGAG+TGG | 0.463137 | 8_4:-6959691 | Msa1310310:CDS |
TTAATGGGTCTAATCATAAT+GGG | 0.463259 | 8_4:-6959645 | Msa1310310:CDS |
TCTGCTAGGTACTTTCCTAA+AGG | 0.464717 | 8_4:-6960411 | Msa1310310:CDS |
TCTTTGAATTCTAGGAGGAA+TGG | 0.471020 | 8_4:-6959925 | Msa1310310:CDS |
TTTCATATATTTGCCGCTCC+CGG | 0.471772 | 8_4:+6960637 | None:intergenic |
TCTCCTTCACATGCGAGGAA+TGG | 0.479275 | 8_4:-6959811 | Msa1310310:CDS |
CGTTCAACTGTGATCCGAAT+GGG | 0.479445 | 8_4:-6960756 | Msa1310310:CDS |
GTGGCAGTGGAAGCGTATGC+AGG | 0.480726 | 8_4:-6960697 | Msa1310310:CDS |
GGAGGTATCGGTCCAATGAT+GGG | 0.481646 | 8_4:-6960071 | Msa1310310:CDS |
GGAAGGAAGTTTATTCCAAA+GGG | 0.482831 | 8_4:-6959865 | Msa1310310:CDS |
GGCCAAGGACGTACCCGGGT+GGG | 0.483142 | 8_4:-6960728 | Msa1310310:CDS |
TCCGAATGGGTGGTGGGCCA+AGG | 0.486021 | 8_4:-6960743 | Msa1310310:CDS |
TCGCGCCTTCAAGAGTTGCT+TGG | 0.489206 | 8_4:+6960665 | None:intergenic |
GCTGTTAGGTCTAATGGATC+TGG | 0.495565 | 8_4:-6959721 | Msa1310310:CDS |
GGAGGAAGGAGAGTGGAAAG+AGG | 0.496002 | 8_4:-6959684 | Msa1310310:CDS |
GGCTTCTCAACCACCTCCCA+AGG | 0.496571 | 8_4:+6960567 | None:intergenic |
TGGAAAGAGGTTTATGTCAA+AGG | 0.497907 | 8_4:-6959671 | Msa1310310:CDS |
GATATGGGTTTGCAACAAGA+TGG | 0.500193 | 8_4:-6959484 | Msa1310310:CDS |
GACCTTTGGACTGAAAATGA+TGG | 0.501676 | 8_4:-6960468 | Msa1310310:CDS |
GAGGAAGAGGGCTGAGCTCA+AGG | 0.501941 | 8_4:-6960613 | Msa1310310:CDS |
TGGAAGATGGTGGCGGTGAA+GGG | 0.503158 | 8_4:-6960320 | Msa1310310:CDS |
AGTTAAACAAATTGGATGGT+GGG | 0.505845 | 8_4:-6960938 | Msa1310310:CDS |
TAGCAGAAGGCAACTCATCA+GGG | 0.507988 | 8_4:+6960427 | None:intergenic |
AGGCGCGACTGTGCCGGGAG+CGG | 0.508240 | 8_4:-6960650 | Msa1310310:CDS |
TAGTATCAAGCCTTATATGA+AGG | 0.508811 | 8_4:-6960379 | Msa1310310:CDS |
GAGAAGAATGCTCCCCATCA+TGG | 0.510637 | 8_4:+6960157 | None:intergenic |
GGTTACTAGTGATGACTTGT+TGG | 0.513129 | 8_4:-6960358 | Msa1310310:CDS |
TCGTTCAACTGTGATCCGAA+TGG | 0.514392 | 8_4:-6960757 | Msa1310310:CDS |
TCCATATCTCCTGCCTGCAA+TGG | 0.515308 | 8_4:+6959573 | None:intergenic |
CAAGGCTGCCGTCTCTGAGT+TGG | 0.515966 | 8_4:-6960595 | Msa1310310:CDS |
TGCTAGGTACTTTCCTAAAG+GGG | 0.520755 | 8_4:-6960409 | Msa1310310:CDS |
AGAATGAGGAAGCACGGGAA+TGG | 0.520786 | 8_4:-6959886 | Msa1310310:CDS |
CATACGCTTCCACTGCCACT+TGG | 0.521521 | 8_4:+6960701 | None:intergenic |
ATTCATTAGGGGATGTTGAT+CGG | 0.523054 | 8_4:-6959972 | Msa1310310:CDS |
ATGTTGATCGGTCCCATGAT+GGG | 0.524280 | 8_4:-6960170 | Msa1310310:CDS |
CTGATGAGTTGCCTTCTGCT+AGG | 0.530521 | 8_4:-6960425 | Msa1310310:CDS |
ACGGAAATGGGAGGAGGTAT+CGG | 0.531125 | 8_4:-6960083 | Msa1310310:CDS |
AGAAGAATGCTCCCCATCAT+GGG | 0.534687 | 8_4:+6960158 | None:intergenic |
AATCATAATGGGATGTATGC+AGG | 0.537916 | 8_4:-6959634 | Msa1310310:CDS |
AATGTTGATCGGTCCCATGA+TGG | 0.538551 | 8_4:-6960171 | Msa1310310:CDS |
AAGTTAAACAAATTGGATGG+TGG | 0.539319 | 8_4:-6960939 | Msa1310310:CDS |
CCACCATCTTCCAAAACATC+CGG | 0.541453 | 8_4:+6960330 | None:intergenic |
GATAGGTTTCAGAAGCCTGG+TGG | 0.543185 | 8_4:-6960495 | Msa1310310:CDS |
TGAGGAAGCACGGGAATGGA+AGG | 0.547129 | 8_4:-6959882 | Msa1310310:CDS |
ATAGGTTTCAGAAGCCTGGT+GGG | 0.552605 | 8_4:-6960494 | Msa1310310:CDS |
GGAGTAATTCCATTGCAGGC+AGG | 0.555506 | 8_4:-6959582 | Msa1310310:CDS |
TGCGAAAGAATGGGAATGGA+AGG | 0.556399 | 8_4:-6960209 | Msa1310310:CDS |
ACTGTGATCCGAATGGGTGG+TGG | 0.557980 | 8_4:-6960750 | Msa1310310:CDS |
TGGAAGGAAGTTTATTCCAA+AGG | 0.560885 | 8_4:-6959866 | Msa1310310:CDS |
AAATATATGAAATGAGGAAG+AGG | 0.565243 | 8_4:-6960626 | Msa1310310:CDS |
GTCCAAAGGTCAAACCCACC+AGG | 0.565839 | 8_4:+6960480 | None:intergenic |
TGATATTAGATCGAGGAGGA+AGG | 0.568183 | 8_4:-6959698 | Msa1310310:CDS |
CGATTGCGAAAGAATGGGAA+TGG | 0.568665 | 8_4:-6960213 | Msa1310310:CDS |
GCAGTCGATTGCGAAAGAAT+GGG | 0.569522 | 8_4:-6960218 | Msa1310310:CDS |
ATGCTAGAATGAGGAAGCAC+GGG | 0.570036 | 8_4:-6959891 | Msa1310310:CDS |
GCTCCATTCCTCGCATGTGA+AGG | 0.570651 | 8_4:+6959808 | None:intergenic |
GGTGGGCCAAGGACGTACCC+GGG | 0.571085 | 8_4:-6960732 | Msa1310310:CDS |
TCCAAAGGGTGTAGATGGGT+CGG | 0.572590 | 8_4:-6959851 | Msa1310310:CDS |
CTGCCGTCTCTGAGTTGGAG+AGG | 0.572800 | 8_4:-6960590 | Msa1310310:CDS |
CTTCTCCTTTGAATTATGGG+AGG | 0.575559 | 8_4:-6960257 | Msa1310310:CDS |
GAAGCGTATGCAGGCCAAGA+AGG | 0.575961 | 8_4:-6960688 | Msa1310310:CDS |
CTTCTCATTTGAGTACTAGG+AGG | 0.576406 | 8_4:-6960041 | Msa1310310:CDS |
TCATTCCTCCCATAATTCAA+AGG | 0.577456 | 8_4:+6960252 | None:intergenic |
GAATAAAGGGAGTGCAAGGA+GGG | 0.580424 | 8_4:-6959764 | Msa1310310:CDS |
GTTCTTCTCCTTCACATGCG+AGG | 0.582316 | 8_4:-6959816 | Msa1310310:CDS |
CAAATATTGATGCTAGAATG+AGG | 0.585058 | 8_4:-6959900 | Msa1310310:CDS |
TAAAAGTTAAACAAATTGGA+TGG | 0.586720 | 8_4:-6960942 | Msa1310310:intron |
TTATTCCAAAGGGTGTAGAT+GGG | 0.587028 | 8_4:-6959855 | Msa1310310:CDS |
CAAAGCTGATGAGCAGCTCA+AGG | 0.588229 | 8_4:-6960526 | Msa1310310:CDS |
GGGAGGAATGAAGCGAGTGT+TGG | 0.589284 | 8_4:-6960240 | Msa1310310:CDS |
CGTGGTGGATTGAGAAAGAA+CGG | 0.589392 | 8_4:-6960102 | Msa1310310:CDS |
GAAAGAACGGAAATGGGAGG+AGG | 0.590748 | 8_4:-6960089 | Msa1310310:CDS |
GATGTTGATGATTGTGAGGG+TGG | 0.591087 | 8_4:-6960285 | Msa1310310:CDS |
ATTCTTCTTTGAATTCTAGG+AGG | 0.595094 | 8_4:-6959930 | Msa1310310:CDS |
TGAGTTGGAGAGGCCTTGGG+AGG | 0.596213 | 8_4:-6960580 | Msa1310310:CDS |
ATGAGTGAATTGAATATTCG+TGG | 0.598183 | 8_4:-6960120 | Msa1310310:CDS |
GATGCTAGAATGAGGAAGCA+CGG | 0.598567 | 8_4:-6959892 | Msa1310310:CDS |
TACTAGTGATGACTTGTTGG+TGG | 0.599018 | 8_4:-6960355 | Msa1310310:CDS |
ACCCGGGTGGGGTGTCCAAG+TGG | 0.601573 | 8_4:-6960716 | Msa1310310:CDS |
GAGGTATCGGTCCAATGATG+GGG | 0.604026 | 8_4:-6960070 | Msa1310310:CDS |
TTCAAACAATGCTTCACGAA+GGG | 0.605338 | 8_4:-6959533 | Msa1310310:CDS |
CGGTGAAGGGTATTGGTCAG+AGG | 0.608666 | 8_4:-6960307 | Msa1310310:CDS |
AATATATGAAATGAGGAAGA+GGG | 0.611111 | 8_4:-6960625 | Msa1310310:CDS |
TTAGGAAAGTACCTAGCAGA+AGG | 0.611161 | 8_4:+6960414 | None:intergenic |
AGCGGCAAATATATGAAATG+AGG | 0.611343 | 8_4:-6960632 | Msa1310310:CDS |
CTGTGATCCGAATGGGTGGT+GGG | 0.612200 | 8_4:-6960749 | Msa1310310:CDS |
GATTCAGAAAGAATGAGAGT+AGG | 0.614189 | 8_4:-6959996 | Msa1310310:CDS |
AGAGGATGTTGATGATTGTG+AGG | 0.615555 | 8_4:-6960289 | Msa1310310:CDS |
TGTTGATCGGTCCCATGATG+GGG | 0.619198 | 8_4:-6960169 | Msa1310310:CDS |
GAAAGAATGGGAATGGAAGG+AGG | 0.619892 | 8_4:-6960206 | Msa1310310:CDS |
AGCAACCTGACTCTACAAGC+TGG | 0.620354 | 8_4:-6959438 | Msa1310310:CDS |
GCCACTTGGACACCCCACCC+GGG | 0.621232 | 8_4:+6960715 | None:intergenic |
ATCACAGTTGAACGAGAAGG+TGG | 0.621729 | 8_4:+6960765 | None:intergenic |
GGAATAAAGGGAGTGCAAGG+AGG | 0.625678 | 8_4:-6959765 | Msa1310310:CDS |
CGGATCACAGTTGAACGAGA+AGG | 0.627012 | 8_4:+6960762 | None:intergenic |
CAGGAATGTGCTGTCCCTCA+CGG | 0.627917 | 8_4:-6960802 | Msa1310310:CDS |
AGGAGTGAACTGAATGTTCG+TGG | 0.632328 | 8_4:-6960021 | Msa1310310:CDS |
TTGATAGAGAACAACTTAGG+GGG | 0.634929 | 8_4:+6960546 | None:intergenic |
TCGGGAATAAAGGGAGTGCA+AGG | 0.635659 | 8_4:-6959768 | Msa1310310:CDS |
TGAGAGTAGGTATTCATTAG+GGG | 0.635950 | 8_4:-6959983 | Msa1310310:CDS |
TGAGAAAGAACGGAAATGGG+AGG | 0.647593 | 8_4:-6960092 | Msa1310310:CDS |
ATTTGTCAGAGAATGTTGAT+CGG | 0.655103 | 8_4:-6960182 | Msa1310310:CDS |
AGGCCTCTCCAACTCAGAGA+CGG | 0.658235 | 8_4:+6960587 | None:intergenic |
TCAACTGTGATCCGAATGGG+TGG | 0.663322 | 8_4:-6960753 | Msa1310310:CDS |
AGCAGAAGGCAACTCATCAG+GGG | 0.664647 | 8_4:+6960428 | None:intergenic |
TTTGATAGAGAACAACTTAG+GGG | 0.666749 | 8_4:+6960545 | None:intergenic |
CTTCTGACAGAACACAGAGA+GGG | 0.672768 | 8_4:-6959603 | Msa1310310:CDS |
AGTGAATTGAATATTCGTGG+TGG | 0.678453 | 8_4:-6960117 | Msa1310310:CDS |
TGACAGTTGTTGTACCACGT+TGG | 0.678494 | 8_4:+6960872 | None:intergenic |
CTTCAAACAATGCTTCACGA+AGG | 0.679253 | 8_4:-6959534 | Msa1310310:CDS |
GCTTCTGACAGAACACAGAG+AGG | 0.682151 | 8_4:-6959604 | Msa1310310:CDS |
GAGGATGTTGATGATTGTGA+GGG | 0.685932 | 8_4:-6960288 | Msa1310310:CDS |
GATATGGAAAATATACTCAG+AGG | 0.693542 | 8_4:-6959558 | Msa1310310:CDS |
CTGGTGATATTAGATCGAGG+AGG | 0.701118 | 8_4:-6959702 | Msa1310310:CDS |
GATCTGGTGATATTAGATCG+AGG | 0.719396 | 8_4:-6959705 | Msa1310310:CDS |
AGTGAACTGAATGTTCGTGG+TGG | 0.720003 | 8_4:-6960018 | Msa1310310:CDS |
TCAGGGGTTTGAAACAACTG+TGG | 0.722897 | 8_4:+6960444 | None:intergenic |
GAATGTGTTATTCGCCAACG+TGG | 0.736711 | 8_4:-6960886 | Msa1310310:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATAAAATTTGAATTTGAAAT+TGG | + | chr8_4:6959516-6959535 | None:intergenic | 10.0% |
!!! | ATAAAATTTGAATTTGAAAT+TGG | + | chr8_4:6959516-6959535 | None:intergenic | 10.0% |
!!! | TTAACTTTTATCTGAAAAAT+AGG | + | chr8_4:6959598-6959617 | None:intergenic | 15.0% |
!!! | TTAACTTTTATCTGAAAAAT+AGG | + | chr8_4:6959598-6959617 | None:intergenic | 15.0% |
!! | AAAATCTTAAGGTTAAAACA+AGG | + | chr8_4:6959486-6959505 | None:intergenic | 20.0% |
!! | TTGGTTAAAACAAAATCTTA+AGG | + | chr8_4:6959497-6959516 | None:intergenic | 20.0% |
!! | CAGATAAAAGTTAAACAAAT+TGG | - | chr8_4:6959604-6959623 | Msa1310310:CDS | 20.0% |
!! | TAAAAGTTAAACAAATTGGA+TGG | - | chr8_4:6959608-6959627 | Msa1310310:CDS | 20.0% |
!!! | AATCTTTATCAAGTTTTGAA+TGG | - | chr8_4:6959714-6959733 | Msa1310310:CDS | 20.0% |
!! | ATTATTCTTCTTTGAATTCT+AGG | - | chr8_4:6960617-6960636 | Msa1310310:CDS | 20.0% |
!! | AAAATCTTAAGGTTAAAACA+AGG | + | chr8_4:6959486-6959505 | None:intergenic | 20.0% |
!! | TTGGTTAAAACAAAATCTTA+AGG | + | chr8_4:6959497-6959516 | None:intergenic | 20.0% |
!! | CAGATAAAAGTTAAACAAAT+TGG | - | chr8_4:6959604-6959623 | Msa1310310:CDS | 20.0% |
!! | TAAAAGTTAAACAAATTGGA+TGG | - | chr8_4:6959608-6959627 | Msa1310310:CDS | 20.0% |
!!! | AATCTTTATCAAGTTTTGAA+TGG | - | chr8_4:6959714-6959733 | Msa1310310:CDS | 20.0% |
!! | ATTATTCTTCTTTGAATTCT+AGG | - | chr8_4:6960617-6960636 | Msa1310310:CDS | 20.0% |
! | TAAAACAAGGAAACTGAAAT+CGG | + | chr8_4:6959473-6959492 | None:intergenic | 25.0% |
! | AAAAATAGGACAGAATTCAA+CGG | + | chr8_4:6959584-6959603 | None:intergenic | 25.0% |
! | TCATATTATTAGCTGTAGTA+TGG | + | chr8_4:6959646-6959665 | None:intergenic | 25.0% |
! | AAATATATGAAATGAGGAAG+AGG | - | chr8_4:6959924-6959943 | Msa1310310:CDS | 25.0% |
! | AATATATGAAATGAGGAAGA+GGG | - | chr8_4:6959925-6959944 | Msa1310310:CDS | 25.0% |
! | TTTATGTCAAAGGATGTTAA+TGG | - | chr8_4:6960889-6960908 | Msa1310310:CDS | 25.0% |
! | TTATGTCAAAGGATGTTAAT+GGG | - | chr8_4:6960890-6960909 | Msa1310310:CDS | 25.0% |
!! | TTAATGGGTCTAATCATAAT+GGG | - | chr8_4:6960905-6960924 | Msa1310310:CDS | 25.0% |
! | AGATACCGAAATTTATGATA+TGG | - | chr8_4:6961050-6961069 | Msa1310310:intron | 25.0% |
! | GATACCGAAATTTATGATAT+GGG | - | chr8_4:6961051-6961070 | Msa1310310:intron | 25.0% |
! | CAAACCCATATCATAAATTT+CGG | + | chr8_4:6961058-6961077 | None:intergenic | 25.0% |
! | TAAAACAAGGAAACTGAAAT+CGG | + | chr8_4:6959473-6959492 | None:intergenic | 25.0% |
! | AAAAATAGGACAGAATTCAA+CGG | + | chr8_4:6959584-6959603 | None:intergenic | 25.0% |
! | TCATATTATTAGCTGTAGTA+TGG | + | chr8_4:6959646-6959665 | None:intergenic | 25.0% |
! | AAATATATGAAATGAGGAAG+AGG | - | chr8_4:6959924-6959943 | Msa1310310:CDS | 25.0% |
! | AATATATGAAATGAGGAAGA+GGG | - | chr8_4:6959925-6959944 | Msa1310310:CDS | 25.0% |
! | TTTATGTCAAAGGATGTTAA+TGG | - | chr8_4:6960889-6960908 | Msa1310310:CDS | 25.0% |
! | TTATGTCAAAGGATGTTAAT+GGG | - | chr8_4:6960890-6960909 | Msa1310310:CDS | 25.0% |
!! | TTAATGGGTCTAATCATAAT+GGG | - | chr8_4:6960905-6960924 | Msa1310310:CDS | 25.0% |
! | AGATACCGAAATTTATGATA+TGG | - | chr8_4:6961050-6961069 | Msa1310310:intron | 25.0% |
! | GATACCGAAATTTATGATAT+GGG | - | chr8_4:6961051-6961070 | Msa1310310:intron | 25.0% |
! | CAAACCCATATCATAAATTT+CGG | + | chr8_4:6961058-6961077 | None:intergenic | 25.0% |
AAGTTAAACAAATTGGATGG+TGG | - | chr8_4:6959611-6959630 | Msa1310310:CDS | 30.0% | |
AGTTAAACAAATTGGATGGT+GGG | - | chr8_4:6959612-6959631 | Msa1310310:CDS | 30.0% | |
TTTGATAGAGAACAACTTAG+GGG | + | chr8_4:6960008-6960027 | None:intergenic | 30.0% | |
CTTTGATAGAGAACAACTTA+GGG | + | chr8_4:6960009-6960028 | None:intergenic | 30.0% | |
! | TAGTATCAAGCCTTATATGA+AGG | - | chr8_4:6960171-6960190 | Msa1310310:CDS | 30.0% |
TCACTAGTAACCTTCATATA+AGG | + | chr8_4:6960184-6960203 | None:intergenic | 30.0% | |
TCTTCTTCTCCTTTGAATTA+TGG | - | chr8_4:6960289-6960308 | Msa1310310:CDS | 30.0% | |
CTTCTTCTCCTTTGAATTAT+GGG | - | chr8_4:6960290-6960309 | Msa1310310:CDS | 30.0% | |
ATTTGTCAGAGAATGTTGAT+CGG | - | chr8_4:6960368-6960387 | Msa1310310:CDS | 30.0% | |
ATGAGTGAATTGAATATTCG+TGG | - | chr8_4:6960430-6960449 | Msa1310310:CDS | 30.0% | |
ATTCTTCTCATTTGAGTACT+AGG | - | chr8_4:6960506-6960525 | Msa1310310:CDS | 30.0% | |
AATGAGAGTAGGTATTCATT+AGG | - | chr8_4:6960565-6960584 | Msa1310310:CDS | 30.0% | |
ATGAGAGTAGGTATTCATTA+GGG | - | chr8_4:6960566-6960585 | Msa1310310:CDS | 30.0% | |
GAATAATGATCTTCATTGTC+TGG | + | chr8_4:6960604-6960623 | None:intergenic | 30.0% | |
ATTCTTCTTTGAATTCTAGG+AGG | - | chr8_4:6960620-6960639 | Msa1310310:CDS | 30.0% | |
CAAATATTGATGCTAGAATG+AGG | - | chr8_4:6960650-6960669 | Msa1310310:CDS | 30.0% | |
! | GTTAATGGGTCTAATCATAA+TGG | - | chr8_4:6960904-6960923 | Msa1310310:CDS | 30.0% |
GATATGGAAAATATACTCAG+AGG | - | chr8_4:6960992-6961011 | Msa1310310:intron | 30.0% | |
AAGTTAAACAAATTGGATGG+TGG | - | chr8_4:6959611-6959630 | Msa1310310:CDS | 30.0% | |
AGTTAAACAAATTGGATGGT+GGG | - | chr8_4:6959612-6959631 | Msa1310310:CDS | 30.0% | |
TTTGATAGAGAACAACTTAG+GGG | + | chr8_4:6960008-6960027 | None:intergenic | 30.0% | |
CTTTGATAGAGAACAACTTA+GGG | + | chr8_4:6960009-6960028 | None:intergenic | 30.0% | |
! | TAGTATCAAGCCTTATATGA+AGG | - | chr8_4:6960171-6960190 | Msa1310310:CDS | 30.0% |
TCACTAGTAACCTTCATATA+AGG | + | chr8_4:6960184-6960203 | None:intergenic | 30.0% | |
TCTTCTTCTCCTTTGAATTA+TGG | - | chr8_4:6960289-6960308 | Msa1310310:CDS | 30.0% | |
CTTCTTCTCCTTTGAATTAT+GGG | - | chr8_4:6960290-6960309 | Msa1310310:CDS | 30.0% | |
ATTTGTCAGAGAATGTTGAT+CGG | - | chr8_4:6960368-6960387 | Msa1310310:CDS | 30.0% | |
ATGAGTGAATTGAATATTCG+TGG | - | chr8_4:6960430-6960449 | Msa1310310:CDS | 30.0% | |
ATTCTTCTCATTTGAGTACT+AGG | - | chr8_4:6960506-6960525 | Msa1310310:CDS | 30.0% | |
AATGAGAGTAGGTATTCATT+AGG | - | chr8_4:6960565-6960584 | Msa1310310:CDS | 30.0% | |
ATGAGAGTAGGTATTCATTA+GGG | - | chr8_4:6960566-6960585 | Msa1310310:CDS | 30.0% | |
GAATAATGATCTTCATTGTC+TGG | + | chr8_4:6960604-6960623 | None:intergenic | 30.0% | |
ATTCTTCTTTGAATTCTAGG+AGG | - | chr8_4:6960620-6960639 | Msa1310310:CDS | 30.0% | |
CAAATATTGATGCTAGAATG+AGG | - | chr8_4:6960650-6960669 | Msa1310310:CDS | 30.0% | |
! | GTTAATGGGTCTAATCATAA+TGG | - | chr8_4:6960904-6960923 | Msa1310310:CDS | 30.0% |
GATATGGAAAATATACTCAG+AGG | - | chr8_4:6960992-6961011 | Msa1310310:intron | 30.0% | |
TAGTAGCTACTGAATTAACC+AGG | - | chr8_4:6959447-6959466 | Msa1310310:CDS | 35.0% | |
AGCGGCAAATATATGAAATG+AGG | - | chr8_4:6959918-6959937 | Msa1310310:CDS | 35.0% | |
TTGATAGAGAACAACTTAGG+GGG | + | chr8_4:6960007-6960026 | None:intergenic | 35.0% | |
GCTTTGATAGAGAACAACTT+AGG | + | chr8_4:6960010-6960029 | None:intergenic | 35.0% | |
ATACTATGAACAACCCCTTT+AGG | + | chr8_4:6960157-6960176 | None:intergenic | 35.0% | |
TCATTCCTCCCATAATTCAA+AGG | + | chr8_4:6960301-6960320 | None:intergenic | 35.0% | |
AGTGAATTGAATATTCGTGG+TGG | - | chr8_4:6960433-6960452 | Msa1310310:CDS | 35.0% | |
GATTGAGAAAGAACGGAAAT+GGG | - | chr8_4:6960455-6960474 | Msa1310310:CDS | 35.0% | |
GATTCAGAAAGAATGAGAGT+AGG | - | chr8_4:6960554-6960573 | Msa1310310:CDS | 35.0% | |
TGAGAGTAGGTATTCATTAG+GGG | - | chr8_4:6960567-6960586 | Msa1310310:CDS | 35.0% | |
ATTCATTAGGGGATGTTGAT+CGG | - | chr8_4:6960578-6960597 | Msa1310310:CDS | 35.0% | |
! | TCTTTGAATTCTAGGAGGAA+TGG | - | chr8_4:6960625-6960644 | Msa1310310:CDS | 35.0% |
TGGAAGGAAGTTTATTCCAA+AGG | - | chr8_4:6960684-6960703 | Msa1310310:CDS | 35.0% | |
GGAAGGAAGTTTATTCCAAA+GGG | - | chr8_4:6960685-6960704 | Msa1310310:CDS | 35.0% | |
! | TTTATTCCAAAGGGTGTAGA+TGG | - | chr8_4:6960694-6960713 | Msa1310310:CDS | 35.0% |
! | TTATTCCAAAGGGTGTAGAT+GGG | - | chr8_4:6960695-6960714 | Msa1310310:CDS | 35.0% |
ATGGCAATTTCGGGAATAAA+GGG | - | chr8_4:6960773-6960792 | Msa1310310:CDS | 35.0% | |
TGGAAAGAGGTTTATGTCAA+AGG | - | chr8_4:6960879-6960898 | Msa1310310:CDS | 35.0% | |
! | AATCATAATGGGATGTATGC+AGG | - | chr8_4:6960916-6960935 | Msa1310310:CDS | 35.0% |
TTCAAACAATGCTTCACGAA+GGG | - | chr8_4:6961017-6961036 | Msa1310310:intron | 35.0% | |
TAGTAGCTACTGAATTAACC+AGG | - | chr8_4:6959447-6959466 | Msa1310310:CDS | 35.0% | |
AGCGGCAAATATATGAAATG+AGG | - | chr8_4:6959918-6959937 | Msa1310310:CDS | 35.0% | |
TTGATAGAGAACAACTTAGG+GGG | + | chr8_4:6960007-6960026 | None:intergenic | 35.0% | |
GCTTTGATAGAGAACAACTT+AGG | + | chr8_4:6960010-6960029 | None:intergenic | 35.0% | |
ATACTATGAACAACCCCTTT+AGG | + | chr8_4:6960157-6960176 | None:intergenic | 35.0% | |
TCATTCCTCCCATAATTCAA+AGG | + | chr8_4:6960301-6960320 | None:intergenic | 35.0% | |
AGTGAATTGAATATTCGTGG+TGG | - | chr8_4:6960433-6960452 | Msa1310310:CDS | 35.0% | |
GATTGAGAAAGAACGGAAAT+GGG | - | chr8_4:6960455-6960474 | Msa1310310:CDS | 35.0% | |
GATTCAGAAAGAATGAGAGT+AGG | - | chr8_4:6960554-6960573 | Msa1310310:CDS | 35.0% | |
TGAGAGTAGGTATTCATTAG+GGG | - | chr8_4:6960567-6960586 | Msa1310310:CDS | 35.0% | |
ATTCATTAGGGGATGTTGAT+CGG | - | chr8_4:6960578-6960597 | Msa1310310:CDS | 35.0% | |
! | TCTTTGAATTCTAGGAGGAA+TGG | - | chr8_4:6960625-6960644 | Msa1310310:CDS | 35.0% |
TGGAAGGAAGTTTATTCCAA+AGG | - | chr8_4:6960684-6960703 | Msa1310310:CDS | 35.0% | |
GGAAGGAAGTTTATTCCAAA+GGG | - | chr8_4:6960685-6960704 | Msa1310310:CDS | 35.0% | |
! | TTTATTCCAAAGGGTGTAGA+TGG | - | chr8_4:6960694-6960713 | Msa1310310:CDS | 35.0% |
! | TTATTCCAAAGGGTGTAGAT+GGG | - | chr8_4:6960695-6960714 | Msa1310310:CDS | 35.0% |
ATGGCAATTTCGGGAATAAA+GGG | - | chr8_4:6960773-6960792 | Msa1310310:CDS | 35.0% | |
TGGAAAGAGGTTTATGTCAA+AGG | - | chr8_4:6960879-6960898 | Msa1310310:CDS | 35.0% | |
! | AATCATAATGGGATGTATGC+AGG | - | chr8_4:6960916-6960935 | Msa1310310:CDS | 35.0% |
TTCAAACAATGCTTCACGAA+GGG | - | chr8_4:6961017-6961036 | Msa1310310:intron | 35.0% | |
TTGAATGGCAGAACAAGAAC+AGG | - | chr8_4:6959729-6959748 | Msa1310310:CDS | 40.0% | |
TTTCATATATTTGCCGCTCC+CGG | + | chr8_4:6959916-6959935 | None:intergenic | 40.0% | |
GACCTTTGGACTGAAAATGA+TGG | - | chr8_4:6960082-6960101 | Msa1310310:CDS | 40.0% | |
! | GTCCATCATTTTCAGTCCAA+AGG | + | chr8_4:6960087-6960106 | None:intergenic | 40.0% |
!! | TTAGGAAAGTACCTAGCAGA+AGG | + | chr8_4:6960139-6960158 | None:intergenic | 40.0% |
TCTGCTAGGTACTTTCCTAA+AGG | - | chr8_4:6960139-6960158 | Msa1310310:CDS | 40.0% | |
CTGCTAGGTACTTTCCTAAA+GGG | - | chr8_4:6960140-6960159 | Msa1310310:CDS | 40.0% | |
TGCTAGGTACTTTCCTAAAG+GGG | - | chr8_4:6960141-6960160 | Msa1310310:CDS | 40.0% | |
! | GGTTACTAGTGATGACTTGT+TGG | - | chr8_4:6960192-6960211 | Msa1310310:CDS | 40.0% |
!! | TACTAGTGATGACTTGTTGG+TGG | - | chr8_4:6960195-6960214 | Msa1310310:CDS | 40.0% |
!! | AGAGGATGTTGATGATTGTG+AGG | - | chr8_4:6960261-6960280 | Msa1310310:CDS | 40.0% |
!! | GAGGATGTTGATGATTGTGA+GGG | - | chr8_4:6960262-6960281 | Msa1310310:CDS | 40.0% |
CTTCTCCTTTGAATTATGGG+AGG | - | chr8_4:6960293-6960312 | Msa1310310:CDS | 40.0% | |
GGATTGAGAAAGAACGGAAA+TGG | - | chr8_4:6960454-6960473 | Msa1310310:CDS | 40.0% | |
AGAAGAATGTTCCCCATCAT+TGG | + | chr8_4:6960494-6960513 | None:intergenic | 40.0% | |
CTTCTCATTTGAGTACTAGG+AGG | - | chr8_4:6960509-6960528 | Msa1310310:CDS | 40.0% | |
!! | GCGAGTTTTGATGGCAATTT+CGG | - | chr8_4:6960763-6960782 | Msa1310310:CDS | 40.0% |
!! | CGAGTTTTGATGGCAATTTC+GGG | - | chr8_4:6960764-6960783 | Msa1310310:CDS | 40.0% |
GATGGCAATTTCGGGAATAA+AGG | - | chr8_4:6960772-6960791 | Msa1310310:CDS | 40.0% | |
!! | AGGAGGGTTTTATCCAACAA+TGG | - | chr8_4:6960802-6960821 | Msa1310310:CDS | 40.0% |
GATCTGGTGATATTAGATCG+AGG | - | chr8_4:6960845-6960864 | Msa1310310:CDS | 40.0% | |
TGATATTAGATCGAGGAGGA+AGG | - | chr8_4:6960852-6960871 | Msa1310310:CDS | 40.0% | |
CTTCAAACAATGCTTCACGA+AGG | - | chr8_4:6961016-6961035 | Msa1310310:intron | 40.0% | |
GATATGGGTTTGCAACAAGA+TGG | - | chr8_4:6961066-6961085 | Msa1310310:intron | 40.0% | |
TTGAATGGCAGAACAAGAAC+AGG | - | chr8_4:6959729-6959748 | Msa1310310:CDS | 40.0% | |
TTTCATATATTTGCCGCTCC+CGG | + | chr8_4:6959916-6959935 | None:intergenic | 40.0% | |
GACCTTTGGACTGAAAATGA+TGG | - | chr8_4:6960082-6960101 | Msa1310310:CDS | 40.0% | |
! | GTCCATCATTTTCAGTCCAA+AGG | + | chr8_4:6960087-6960106 | None:intergenic | 40.0% |
!! | TTAGGAAAGTACCTAGCAGA+AGG | + | chr8_4:6960139-6960158 | None:intergenic | 40.0% |
TCTGCTAGGTACTTTCCTAA+AGG | - | chr8_4:6960139-6960158 | Msa1310310:CDS | 40.0% | |
CTGCTAGGTACTTTCCTAAA+GGG | - | chr8_4:6960140-6960159 | Msa1310310:CDS | 40.0% | |
TGCTAGGTACTTTCCTAAAG+GGG | - | chr8_4:6960141-6960160 | Msa1310310:CDS | 40.0% | |
! | GGTTACTAGTGATGACTTGT+TGG | - | chr8_4:6960192-6960211 | Msa1310310:CDS | 40.0% |
!! | TACTAGTGATGACTTGTTGG+TGG | - | chr8_4:6960195-6960214 | Msa1310310:CDS | 40.0% |
!! | AGAGGATGTTGATGATTGTG+AGG | - | chr8_4:6960261-6960280 | Msa1310310:CDS | 40.0% |
!! | GAGGATGTTGATGATTGTGA+GGG | - | chr8_4:6960262-6960281 | Msa1310310:CDS | 40.0% |
CTTCTCCTTTGAATTATGGG+AGG | - | chr8_4:6960293-6960312 | Msa1310310:CDS | 40.0% | |
GGATTGAGAAAGAACGGAAA+TGG | - | chr8_4:6960454-6960473 | Msa1310310:CDS | 40.0% | |
AGAAGAATGTTCCCCATCAT+TGG | + | chr8_4:6960494-6960513 | None:intergenic | 40.0% | |
CTTCTCATTTGAGTACTAGG+AGG | - | chr8_4:6960509-6960528 | Msa1310310:CDS | 40.0% | |
!! | GCGAGTTTTGATGGCAATTT+CGG | - | chr8_4:6960763-6960782 | Msa1310310:CDS | 40.0% |
!! | CGAGTTTTGATGGCAATTTC+GGG | - | chr8_4:6960764-6960783 | Msa1310310:CDS | 40.0% |
GATGGCAATTTCGGGAATAA+AGG | - | chr8_4:6960772-6960791 | Msa1310310:CDS | 40.0% | |
!! | AGGAGGGTTTTATCCAACAA+TGG | - | chr8_4:6960802-6960821 | Msa1310310:CDS | 40.0% |
GATCTGGTGATATTAGATCG+AGG | - | chr8_4:6960845-6960864 | Msa1310310:CDS | 40.0% | |
TGATATTAGATCGAGGAGGA+AGG | - | chr8_4:6960852-6960871 | Msa1310310:CDS | 40.0% | |
CTTCAAACAATGCTTCACGA+AGG | - | chr8_4:6961016-6961035 | Msa1310310:intron | 40.0% | |
GATATGGGTTTGCAACAAGA+TGG | - | chr8_4:6961066-6961085 | Msa1310310:intron | 40.0% | |
! | GAATGTGTTATTCGCCAACG+TGG | - | chr8_4:6959664-6959683 | Msa1310310:CDS | 45.0% |
TGACAGTTGTTGTACCACGT+TGG | + | chr8_4:6959681-6959700 | None:intergenic | 45.0% | |
! | TTTTGCTACAGTGACCGTGA+GGG | + | chr8_4:6959765-6959784 | None:intergenic | 45.0% |
ATCACAGTTGAACGAGAAGG+TGG | + | chr8_4:6959788-6959807 | None:intergenic | 45.0% | |
TCGTTCAACTGTGATCCGAA+TGG | - | chr8_4:6959793-6959812 | Msa1310310:CDS | 45.0% | |
CGTTCAACTGTGATCCGAAT+GGG | - | chr8_4:6959794-6959813 | Msa1310310:CDS | 45.0% | |
! | TGATGAGCAGCTCAAGGTTT+TGG | - | chr8_4:6960030-6960049 | Msa1310310:CDS | 45.0% |
!!! | AGCTCAAGGTTTTGGCTGAT+AGG | - | chr8_4:6960038-6960057 | Msa1310310:CDS | 45.0% |
ATAGGTTTCAGAAGCCTGGT+GGG | - | chr8_4:6960056-6960075 | Msa1310310:CDS | 45.0% | |
! | TCAGGGGTTTGAAACAACTG+TGG | + | chr8_4:6960109-6960128 | None:intergenic | 45.0% |
TAGCAGAAGGCAACTCATCA+GGG | + | chr8_4:6960126-6960145 | None:intergenic | 45.0% | |
!! | TGATGACTTGTTGGTGGAAC+CGG | - | chr8_4:6960201-6960220 | Msa1310310:CDS | 45.0% |
!!! | GAACCGGATGTTTTGGAAGA+TGG | - | chr8_4:6960217-6960236 | Msa1310310:CDS | 45.0% |
CCACCATCTTCCAAAACATC+CGG | + | chr8_4:6960223-6960242 | None:intergenic | 45.0% | |
!!! | GATGTTTTGGAAGATGGTGG+CGG | - | chr8_4:6960223-6960242 | Msa1310310:CDS | 45.0% |
!! | GATGTTGATGATTGTGAGGG+TGG | - | chr8_4:6960265-6960284 | Msa1310310:CDS | 45.0% |
GCAGTCGATTGCGAAAGAAT+GGG | - | chr8_4:6960332-6960351 | Msa1310310:CDS | 45.0% | |
CGATTGCGAAAGAATGGGAA+TGG | - | chr8_4:6960337-6960356 | Msa1310310:CDS | 45.0% | |
TGCGAAAGAATGGGAATGGA+AGG | - | chr8_4:6960341-6960360 | Msa1310310:CDS | 45.0% | |
GAAAGAATGGGAATGGAAGG+AGG | - | chr8_4:6960344-6960363 | Msa1310310:CDS | 45.0% | |
AATGTTGATCGGTCCCATGA+TGG | - | chr8_4:6960379-6960398 | Msa1310310:CDS | 45.0% | |
ATGTTGATCGGTCCCATGAT+GGG | - | chr8_4:6960380-6960399 | Msa1310310:CDS | 45.0% | |
AGAAGAATGCTCCCCATCAT+GGG | + | chr8_4:6960395-6960414 | None:intergenic | 45.0% | |
!! | CGTGGTGGATTGAGAAAGAA+CGG | - | chr8_4:6960448-6960467 | Msa1310310:CDS | 45.0% |
TGAGAAAGAACGGAAATGGG+AGG | - | chr8_4:6960458-6960477 | Msa1310310:CDS | 45.0% | |
AGGAGTGAACTGAATGTTCG+TGG | - | chr8_4:6960529-6960548 | Msa1310310:CDS | 45.0% | |
AGTGAACTGAATGTTCGTGG+TGG | - | chr8_4:6960532-6960551 | Msa1310310:CDS | 45.0% | |
GATGCTAGAATGAGGAAGCA+CGG | - | chr8_4:6960658-6960677 | Msa1310310:CDS | 45.0% | |
! | ATGCTAGAATGAGGAAGCAC+GGG | - | chr8_4:6960659-6960678 | Msa1310310:CDS | 45.0% |
!! | AGGAATGGAGCGAGTTTTGA+TGG | - | chr8_4:6960754-6960773 | Msa1310310:CDS | 45.0% |
! | GAATAAAGGGAGTGCAAGGA+GGG | - | chr8_4:6960786-6960805 | Msa1310310:CDS | 45.0% |
CCTAACAGCATCACCATTGT+TGG | + | chr8_4:6960818-6960837 | None:intergenic | 45.0% | |
! | CCAACAATGGTGATGCTGTT+AGG | - | chr8_4:6960815-6960834 | Msa1310310:CDS | 45.0% |
GGTGATGCTGTTAGGTCTAA+TGG | - | chr8_4:6960823-6960842 | Msa1310310:CDS | 45.0% | |
! | GCTGTTAGGTCTAATGGATC+TGG | - | chr8_4:6960829-6960848 | Msa1310310:CDS | 45.0% |
CTGGTGATATTAGATCGAGG+AGG | - | chr8_4:6960848-6960867 | Msa1310310:CDS | 45.0% | |
CTTCTGACAGAACACAGAGA+GGG | - | chr8_4:6960947-6960966 | Msa1310310:intron | 45.0% | |
AGAGGGAGTAATTCCATTGC+AGG | - | chr8_4:6960964-6960983 | Msa1310310:intron | 45.0% | |
! | GAATGTGTTATTCGCCAACG+TGG | - | chr8_4:6959664-6959683 | Msa1310310:CDS | 45.0% |
TGACAGTTGTTGTACCACGT+TGG | + | chr8_4:6959681-6959700 | None:intergenic | 45.0% | |
! | TTTTGCTACAGTGACCGTGA+GGG | + | chr8_4:6959765-6959784 | None:intergenic | 45.0% |
ATCACAGTTGAACGAGAAGG+TGG | + | chr8_4:6959788-6959807 | None:intergenic | 45.0% | |
TCGTTCAACTGTGATCCGAA+TGG | - | chr8_4:6959793-6959812 | Msa1310310:CDS | 45.0% | |
CGTTCAACTGTGATCCGAAT+GGG | - | chr8_4:6959794-6959813 | Msa1310310:CDS | 45.0% | |
! | TGATGAGCAGCTCAAGGTTT+TGG | - | chr8_4:6960030-6960049 | Msa1310310:CDS | 45.0% |
!!! | AGCTCAAGGTTTTGGCTGAT+AGG | - | chr8_4:6960038-6960057 | Msa1310310:CDS | 45.0% |
ATAGGTTTCAGAAGCCTGGT+GGG | - | chr8_4:6960056-6960075 | Msa1310310:CDS | 45.0% | |
! | TCAGGGGTTTGAAACAACTG+TGG | + | chr8_4:6960109-6960128 | None:intergenic | 45.0% |
TAGCAGAAGGCAACTCATCA+GGG | + | chr8_4:6960126-6960145 | None:intergenic | 45.0% | |
!! | TGATGACTTGTTGGTGGAAC+CGG | - | chr8_4:6960201-6960220 | Msa1310310:CDS | 45.0% |
!!! | GAACCGGATGTTTTGGAAGA+TGG | - | chr8_4:6960217-6960236 | Msa1310310:CDS | 45.0% |
CCACCATCTTCCAAAACATC+CGG | + | chr8_4:6960223-6960242 | None:intergenic | 45.0% | |
!!! | GATGTTTTGGAAGATGGTGG+CGG | - | chr8_4:6960223-6960242 | Msa1310310:CDS | 45.0% |
!! | GATGTTGATGATTGTGAGGG+TGG | - | chr8_4:6960265-6960284 | Msa1310310:CDS | 45.0% |
GCAGTCGATTGCGAAAGAAT+GGG | - | chr8_4:6960332-6960351 | Msa1310310:CDS | 45.0% | |
CGATTGCGAAAGAATGGGAA+TGG | - | chr8_4:6960337-6960356 | Msa1310310:CDS | 45.0% | |
TGCGAAAGAATGGGAATGGA+AGG | - | chr8_4:6960341-6960360 | Msa1310310:CDS | 45.0% | |
GAAAGAATGGGAATGGAAGG+AGG | - | chr8_4:6960344-6960363 | Msa1310310:CDS | 45.0% | |
AATGTTGATCGGTCCCATGA+TGG | - | chr8_4:6960379-6960398 | Msa1310310:CDS | 45.0% | |
ATGTTGATCGGTCCCATGAT+GGG | - | chr8_4:6960380-6960399 | Msa1310310:CDS | 45.0% | |
AGAAGAATGCTCCCCATCAT+GGG | + | chr8_4:6960395-6960414 | None:intergenic | 45.0% | |
!! | CGTGGTGGATTGAGAAAGAA+CGG | - | chr8_4:6960448-6960467 | Msa1310310:CDS | 45.0% |
TGAGAAAGAACGGAAATGGG+AGG | - | chr8_4:6960458-6960477 | Msa1310310:CDS | 45.0% | |
AGGAGTGAACTGAATGTTCG+TGG | - | chr8_4:6960529-6960548 | Msa1310310:CDS | 45.0% | |
AGTGAACTGAATGTTCGTGG+TGG | - | chr8_4:6960532-6960551 | Msa1310310:CDS | 45.0% | |
GATGCTAGAATGAGGAAGCA+CGG | - | chr8_4:6960658-6960677 | Msa1310310:CDS | 45.0% | |
! | ATGCTAGAATGAGGAAGCAC+GGG | - | chr8_4:6960659-6960678 | Msa1310310:CDS | 45.0% |
!! | AGGAATGGAGCGAGTTTTGA+TGG | - | chr8_4:6960754-6960773 | Msa1310310:CDS | 45.0% |
! | GAATAAAGGGAGTGCAAGGA+GGG | - | chr8_4:6960786-6960805 | Msa1310310:CDS | 45.0% |
CCTAACAGCATCACCATTGT+TGG | + | chr8_4:6960818-6960837 | None:intergenic | 45.0% | |
! | CCAACAATGGTGATGCTGTT+AGG | - | chr8_4:6960815-6960834 | Msa1310310:CDS | 45.0% |
GGTGATGCTGTTAGGTCTAA+TGG | - | chr8_4:6960823-6960842 | Msa1310310:CDS | 45.0% | |
! | GCTGTTAGGTCTAATGGATC+TGG | - | chr8_4:6960829-6960848 | Msa1310310:CDS | 45.0% |
CTGGTGATATTAGATCGAGG+AGG | - | chr8_4:6960848-6960867 | Msa1310310:CDS | 45.0% | |
CTTCTGACAGAACACAGAGA+GGG | - | chr8_4:6960947-6960966 | Msa1310310:intron | 45.0% | |
AGAGGGAGTAATTCCATTGC+AGG | - | chr8_4:6960964-6960983 | Msa1310310:intron | 45.0% | |
CAAGGAAACTGAAATCGGCC+TGG | + | chr8_4:6959468-6959487 | None:intergenic | 50.0% | |
! | GTTTTGCTACAGTGACCGTG+AGG | + | chr8_4:6959766-6959785 | None:intergenic | 50.0% |
CGGATCACAGTTGAACGAGA+AGG | + | chr8_4:6959791-6959810 | None:intergenic | 50.0% | |
TCAACTGTGATCCGAATGGG+TGG | - | chr8_4:6959797-6959816 | Msa1310310:CDS | 50.0% | |
! | CAAGAGTTGCTTGGCCTTCT+TGG | + | chr8_4:6959879-6959898 | None:intergenic | 50.0% |
GAAGGCCAAGCAACTCTTGA+AGG | - | chr8_4:6959880-6959899 | Msa1310310:CDS | 50.0% | |
CAAAGCTGATGAGCAGCTCA+AGG | - | chr8_4:6960024-6960043 | Msa1310310:CDS | 50.0% | |
GCTGATAGGTTTCAGAAGCC+TGG | - | chr8_4:6960052-6960071 | Msa1310310:CDS | 50.0% | |
GATAGGTTTCAGAAGCCTGG+TGG | - | chr8_4:6960055-6960074 | Msa1310310:CDS | 50.0% | |
AGCAGAAGGCAACTCATCAG+GGG | + | chr8_4:6960125-6960144 | None:intergenic | 50.0% | |
CTAGCAGAAGGCAACTCATC+AGG | + | chr8_4:6960127-6960146 | None:intergenic | 50.0% | |
CTGATGAGTTGCCTTCTGCT+AGG | - | chr8_4:6960125-6960144 | Msa1310310:CDS | 50.0% | |
!! | GTTGGTGGAACCGGATGTTT+TGG | - | chr8_4:6960210-6960229 | Msa1310310:CDS | 50.0% |
!!! | CCGGATGTTTTGGAAGATGG+TGG | - | chr8_4:6960220-6960239 | Msa1310310:CDS | 50.0% |
GGCAGTCGATTGCGAAAGAA+TGG | - | chr8_4:6960331-6960350 | Msa1310310:CDS | 50.0% | |
TGTTGATCGGTCCCATGATG+GGG | - | chr8_4:6960381-6960400 | Msa1310310:CDS | 50.0% | |
GAGAAGAATGCTCCCCATCA+TGG | + | chr8_4:6960396-6960415 | None:intergenic | 50.0% | |
GAAAGAACGGAAATGGGAGG+AGG | - | chr8_4:6960461-6960480 | Msa1310310:CDS | 50.0% | |
! | ACGGAAATGGGAGGAGGTAT+CGG | - | chr8_4:6960467-6960486 | Msa1310310:CDS | 50.0% |
!! | AGGAGGTATCGGTCCAATGA+TGG | - | chr8_4:6960478-6960497 | Msa1310310:CDS | 50.0% |
!! | GGAGGTATCGGTCCAATGAT+GGG | - | chr8_4:6960479-6960498 | Msa1310310:CDS | 50.0% |
!! | GAGGTATCGGTCCAATGATG+GGG | - | chr8_4:6960480-6960499 | Msa1310310:CDS | 50.0% |
! | AGAATGAGGAAGCACGGGAA+TGG | - | chr8_4:6960664-6960683 | Msa1310310:CDS | 50.0% |
! | TCCAAAGGGTGTAGATGGGT+CGG | - | chr8_4:6960699-6960718 | Msa1310310:CDS | 50.0% |
GTTCTTCTCCTTCACATGCG+AGG | - | chr8_4:6960734-6960753 | Msa1310310:CDS | 50.0% | |
TCTCCTTCACATGCGAGGAA+TGG | - | chr8_4:6960739-6960758 | Msa1310310:CDS | 50.0% | |
! | TCGGGAATAAAGGGAGTGCA+AGG | - | chr8_4:6960782-6960801 | Msa1310310:CDS | 50.0% |
! | GGAATAAAGGGAGTGCAAGG+AGG | - | chr8_4:6960785-6960804 | Msa1310310:CDS | 50.0% |
GCTTCTGACAGAACACAGAG+AGG | - | chr8_4:6960946-6960965 | Msa1310310:intron | 50.0% | |
GGAGTAATTCCATTGCAGGC+AGG | - | chr8_4:6960968-6960987 | Msa1310310:intron | 50.0% | |
TCCATTGCAGGCAGGAGATA+TGG | - | chr8_4:6960976-6960995 | Msa1310310:intron | 50.0% | |
TCCATATCTCCTGCCTGCAA+TGG | + | chr8_4:6960980-6960999 | None:intergenic | 50.0% | |
AGCAACCTGACTCTACAAGC+TGG | - | chr8_4:6961112-6961131 | Msa1310310:intron | 50.0% | |
CAAGGAAACTGAAATCGGCC+TGG | + | chr8_4:6959468-6959487 | None:intergenic | 50.0% | |
! | GTTTTGCTACAGTGACCGTG+AGG | + | chr8_4:6959766-6959785 | None:intergenic | 50.0% |
CGGATCACAGTTGAACGAGA+AGG | + | chr8_4:6959791-6959810 | None:intergenic | 50.0% | |
TCAACTGTGATCCGAATGGG+TGG | - | chr8_4:6959797-6959816 | Msa1310310:CDS | 50.0% | |
! | CAAGAGTTGCTTGGCCTTCT+TGG | + | chr8_4:6959879-6959898 | None:intergenic | 50.0% |
GAAGGCCAAGCAACTCTTGA+AGG | - | chr8_4:6959880-6959899 | Msa1310310:CDS | 50.0% | |
CAAAGCTGATGAGCAGCTCA+AGG | - | chr8_4:6960024-6960043 | Msa1310310:CDS | 50.0% | |
GCTGATAGGTTTCAGAAGCC+TGG | - | chr8_4:6960052-6960071 | Msa1310310:CDS | 50.0% | |
GATAGGTTTCAGAAGCCTGG+TGG | - | chr8_4:6960055-6960074 | Msa1310310:CDS | 50.0% | |
AGCAGAAGGCAACTCATCAG+GGG | + | chr8_4:6960125-6960144 | None:intergenic | 50.0% | |
CTAGCAGAAGGCAACTCATC+AGG | + | chr8_4:6960127-6960146 | None:intergenic | 50.0% | |
CTGATGAGTTGCCTTCTGCT+AGG | - | chr8_4:6960125-6960144 | Msa1310310:CDS | 50.0% | |
!! | GTTGGTGGAACCGGATGTTT+TGG | - | chr8_4:6960210-6960229 | Msa1310310:CDS | 50.0% |
!!! | CCGGATGTTTTGGAAGATGG+TGG | - | chr8_4:6960220-6960239 | Msa1310310:CDS | 50.0% |
GGCAGTCGATTGCGAAAGAA+TGG | - | chr8_4:6960331-6960350 | Msa1310310:CDS | 50.0% | |
TGTTGATCGGTCCCATGATG+GGG | - | chr8_4:6960381-6960400 | Msa1310310:CDS | 50.0% | |
GAGAAGAATGCTCCCCATCA+TGG | + | chr8_4:6960396-6960415 | None:intergenic | 50.0% | |
GAAAGAACGGAAATGGGAGG+AGG | - | chr8_4:6960461-6960480 | Msa1310310:CDS | 50.0% | |
! | ACGGAAATGGGAGGAGGTAT+CGG | - | chr8_4:6960467-6960486 | Msa1310310:CDS | 50.0% |
!! | AGGAGGTATCGGTCCAATGA+TGG | - | chr8_4:6960478-6960497 | Msa1310310:CDS | 50.0% |
!! | GGAGGTATCGGTCCAATGAT+GGG | - | chr8_4:6960479-6960498 | Msa1310310:CDS | 50.0% |
!! | GAGGTATCGGTCCAATGATG+GGG | - | chr8_4:6960480-6960499 | Msa1310310:CDS | 50.0% |
! | AGAATGAGGAAGCACGGGAA+TGG | - | chr8_4:6960664-6960683 | Msa1310310:CDS | 50.0% |
! | TCCAAAGGGTGTAGATGGGT+CGG | - | chr8_4:6960699-6960718 | Msa1310310:CDS | 50.0% |
GTTCTTCTCCTTCACATGCG+AGG | - | chr8_4:6960734-6960753 | Msa1310310:CDS | 50.0% | |
TCTCCTTCACATGCGAGGAA+TGG | - | chr8_4:6960739-6960758 | Msa1310310:CDS | 50.0% | |
! | TCGGGAATAAAGGGAGTGCA+AGG | - | chr8_4:6960782-6960801 | Msa1310310:CDS | 50.0% |
! | GGAATAAAGGGAGTGCAAGG+AGG | - | chr8_4:6960785-6960804 | Msa1310310:CDS | 50.0% |
GCTTCTGACAGAACACAGAG+AGG | - | chr8_4:6960946-6960965 | Msa1310310:intron | 50.0% | |
GGAGTAATTCCATTGCAGGC+AGG | - | chr8_4:6960968-6960987 | Msa1310310:intron | 50.0% | |
TCCATTGCAGGCAGGAGATA+TGG | - | chr8_4:6960976-6960995 | Msa1310310:intron | 50.0% | |
TCCATATCTCCTGCCTGCAA+TGG | + | chr8_4:6960980-6960999 | None:intergenic | 50.0% | |
AGCAACCTGACTCTACAAGC+TGG | - | chr8_4:6961112-6961131 | Msa1310310:intron | 50.0% | |
CAGGAATGTGCTGTCCCTCA+CGG | - | chr8_4:6959748-6959767 | Msa1310310:CDS | 55.0% | |
ACTGTGATCCGAATGGGTGG+TGG | - | chr8_4:6959800-6959819 | Msa1310310:CDS | 55.0% | |
CTGTGATCCGAATGGGTGGT+GGG | - | chr8_4:6959801-6959820 | Msa1310310:CDS | 55.0% | |
CATACGCTTCCACTGCCACT+TGG | + | chr8_4:6959852-6959871 | None:intergenic | 55.0% | |
GAAGCGTATGCAGGCCAAGA+AGG | - | chr8_4:6959862-6959881 | Msa1310310:CDS | 55.0% | |
TCGCGCCTTCAAGAGTTGCT+TGG | + | chr8_4:6959888-6959907 | None:intergenic | 55.0% | |
AGGCCTCTCCAACTCAGAGA+CGG | + | chr8_4:6959966-6959985 | None:intergenic | 55.0% | |
! | TCTCTGAGTTGGAGAGGCCT+TGG | - | chr8_4:6959966-6959985 | Msa1310310:CDS | 55.0% |
! | CTCTGAGTTGGAGAGGCCTT+GGG | - | chr8_4:6959967-6959986 | Msa1310310:CDS | 55.0% |
!! | AGCCTGGTGGGTTTGACCTT+TGG | - | chr8_4:6960068-6960087 | Msa1310310:CDS | 55.0% |
GTCCAAAGGTCAAACCCACC+AGG | + | chr8_4:6960073-6960092 | None:intergenic | 55.0% | |
!! | TTGGAAGATGGTGGCGGTGA+AGG | - | chr8_4:6960229-6960248 | Msa1310310:CDS | 55.0% |
!! | TGGAAGATGGTGGCGGTGAA+GGG | - | chr8_4:6960230-6960249 | Msa1310310:CDS | 55.0% |
!! | ATGGTGGCGGTGAAGGGTAT+TGG | - | chr8_4:6960236-6960255 | Msa1310310:CDS | 55.0% |
!! | CGGTGAAGGGTATTGGTCAG+AGG | - | chr8_4:6960243-6960262 | Msa1310310:CDS | 55.0% |
GGGAGGAATGAAGCGAGTGT+TGG | - | chr8_4:6960310-6960329 | Msa1310310:CDS | 55.0% | |
! | TGAGGAAGCACGGGAATGGA+AGG | - | chr8_4:6960668-6960687 | Msa1310310:CDS | 55.0% |
TCCGACCCATCTACACCCTT+TGG | + | chr8_4:6960703-6960722 | None:intergenic | 55.0% | |
GCTCCATTCCTCGCATGTGA+AGG | + | chr8_4:6960745-6960764 | None:intergenic | 55.0% | |
AGATCGAGGAGGAAGGAGAG+TGG | - | chr8_4:6960859-6960878 | Msa1310310:CDS | 55.0% | |
GGAGGAAGGAGAGTGGAAAG+AGG | - | chr8_4:6960866-6960885 | Msa1310310:CDS | 55.0% | |
CAGGAATGTGCTGTCCCTCA+CGG | - | chr8_4:6959748-6959767 | Msa1310310:CDS | 55.0% | |
ACTGTGATCCGAATGGGTGG+TGG | - | chr8_4:6959800-6959819 | Msa1310310:CDS | 55.0% | |
CTGTGATCCGAATGGGTGGT+GGG | - | chr8_4:6959801-6959820 | Msa1310310:CDS | 55.0% | |
CATACGCTTCCACTGCCACT+TGG | + | chr8_4:6959852-6959871 | None:intergenic | 55.0% | |
GAAGCGTATGCAGGCCAAGA+AGG | - | chr8_4:6959862-6959881 | Msa1310310:CDS | 55.0% | |
TCGCGCCTTCAAGAGTTGCT+TGG | + | chr8_4:6959888-6959907 | None:intergenic | 55.0% | |
AGGCCTCTCCAACTCAGAGA+CGG | + | chr8_4:6959966-6959985 | None:intergenic | 55.0% | |
! | TCTCTGAGTTGGAGAGGCCT+TGG | - | chr8_4:6959966-6959985 | Msa1310310:CDS | 55.0% |
! | CTCTGAGTTGGAGAGGCCTT+GGG | - | chr8_4:6959967-6959986 | Msa1310310:CDS | 55.0% |
!! | AGCCTGGTGGGTTTGACCTT+TGG | - | chr8_4:6960068-6960087 | Msa1310310:CDS | 55.0% |
GTCCAAAGGTCAAACCCACC+AGG | + | chr8_4:6960073-6960092 | None:intergenic | 55.0% | |
!! | TTGGAAGATGGTGGCGGTGA+AGG | - | chr8_4:6960229-6960248 | Msa1310310:CDS | 55.0% |
!! | TGGAAGATGGTGGCGGTGAA+GGG | - | chr8_4:6960230-6960249 | Msa1310310:CDS | 55.0% |
!! | ATGGTGGCGGTGAAGGGTAT+TGG | - | chr8_4:6960236-6960255 | Msa1310310:CDS | 55.0% |
!! | CGGTGAAGGGTATTGGTCAG+AGG | - | chr8_4:6960243-6960262 | Msa1310310:CDS | 55.0% |
GGGAGGAATGAAGCGAGTGT+TGG | - | chr8_4:6960310-6960329 | Msa1310310:CDS | 55.0% | |
! | TGAGGAAGCACGGGAATGGA+AGG | - | chr8_4:6960668-6960687 | Msa1310310:CDS | 55.0% |
TCCGACCCATCTACACCCTT+TGG | + | chr8_4:6960703-6960722 | None:intergenic | 55.0% | |
GCTCCATTCCTCGCATGTGA+AGG | + | chr8_4:6960745-6960764 | None:intergenic | 55.0% | |
AGATCGAGGAGGAAGGAGAG+TGG | - | chr8_4:6960859-6960878 | Msa1310310:CDS | 55.0% | |
GGAGGAAGGAGAGTGGAAAG+AGG | - | chr8_4:6960866-6960885 | Msa1310310:CDS | 55.0% | |
TCCTTGGCCCACCACCCATT+CGG | + | chr8_4:6959811-6959830 | None:intergenic | 60.0% | |
! | GTGGCAGTGGAAGCGTATGC+AGG | - | chr8_4:6959853-6959872 | Msa1310310:CDS | 60.0% |
! | TCTTGAAGGCGCGACTGTGC+CGG | - | chr8_4:6959894-6959913 | Msa1310310:CDS | 60.0% |
GAGGAAGAGGGCTGAGCTCA+AGG | - | chr8_4:6959937-6959956 | Msa1310310:CDS | 60.0% | |
CAAGGCTGCCGTCTCTGAGT+TGG | - | chr8_4:6959955-6959974 | Msa1310310:CDS | 60.0% | |
! | CTGCCGTCTCTGAGTTGGAG+AGG | - | chr8_4:6959960-6959979 | Msa1310310:CDS | 60.0% |
! | TGAGTTGGAGAGGCCTTGGG+AGG | - | chr8_4:6959970-6959989 | Msa1310310:CDS | 60.0% |
GGCTTCTCAACCACCTCCCA+AGG | + | chr8_4:6959986-6960005 | None:intergenic | 60.0% | |
TCCTTGGCCCACCACCCATT+CGG | + | chr8_4:6959811-6959830 | None:intergenic | 60.0% | |
! | GTGGCAGTGGAAGCGTATGC+AGG | - | chr8_4:6959853-6959872 | Msa1310310:CDS | 60.0% |
! | TCTTGAAGGCGCGACTGTGC+CGG | - | chr8_4:6959894-6959913 | Msa1310310:CDS | 60.0% |
GAGGAAGAGGGCTGAGCTCA+AGG | - | chr8_4:6959937-6959956 | Msa1310310:CDS | 60.0% | |
CAAGGCTGCCGTCTCTGAGT+TGG | - | chr8_4:6959955-6959974 | Msa1310310:CDS | 60.0% | |
! | CTGCCGTCTCTGAGTTGGAG+AGG | - | chr8_4:6959960-6959979 | Msa1310310:CDS | 60.0% |
! | TGAGTTGGAGAGGCCTTGGG+AGG | - | chr8_4:6959970-6959989 | Msa1310310:CDS | 60.0% |
GGCTTCTCAACCACCTCCCA+AGG | + | chr8_4:6959986-6960005 | None:intergenic | 60.0% | |
!! | TCCGAATGGGTGGTGGGCCA+AGG | - | chr8_4:6959807-6959826 | Msa1310310:CDS | 65.0% |
! | TGGTGGGCCAAGGACGTACC+CGG | - | chr8_4:6959817-6959836 | Msa1310310:CDS | 65.0% |
! | TGCCACTTGGACACCCCACC+CGG | + | chr8_4:6959839-6959858 | None:intergenic | 65.0% |
! | GTGGGGTGTCCAAGTGGCAG+TGG | - | chr8_4:6959840-6959859 | Msa1310310:CDS | 65.0% |
! | CTTGAAGGCGCGACTGTGCC+GGG | - | chr8_4:6959895-6959914 | Msa1310310:CDS | 65.0% |
GTTGGAGAGGCCTTGGGAGG+TGG | - | chr8_4:6959973-6959992 | Msa1310310:CDS | 65.0% | |
!! | TCCGAATGGGTGGTGGGCCA+AGG | - | chr8_4:6959807-6959826 | Msa1310310:CDS | 65.0% |
! | TGGTGGGCCAAGGACGTACC+CGG | - | chr8_4:6959817-6959836 | Msa1310310:CDS | 65.0% |
! | TGCCACTTGGACACCCCACC+CGG | + | chr8_4:6959839-6959858 | None:intergenic | 65.0% |
! | GTGGGGTGTCCAAGTGGCAG+TGG | - | chr8_4:6959840-6959859 | Msa1310310:CDS | 65.0% |
! | CTTGAAGGCGCGACTGTGCC+GGG | - | chr8_4:6959895-6959914 | Msa1310310:CDS | 65.0% |
GTTGGAGAGGCCTTGGGAGG+TGG | - | chr8_4:6959973-6959992 | Msa1310310:CDS | 65.0% | |
GGTGGGCCAAGGACGTACCC+GGG | - | chr8_4:6959818-6959837 | Msa1310310:CDS | 70.0% | |
GGCCAAGGACGTACCCGGGT+GGG | - | chr8_4:6959822-6959841 | Msa1310310:CDS | 70.0% | |
GCCAAGGACGTACCCGGGTG+GGG | - | chr8_4:6959823-6959842 | Msa1310310:CDS | 70.0% | |
ACCCCACCCGGGTACGTCCT+TGG | + | chr8_4:6959827-6959846 | None:intergenic | 70.0% | |
! | ACCCGGGTGGGGTGTCCAAG+TGG | - | chr8_4:6959834-6959853 | Msa1310310:CDS | 70.0% |
GCCACTTGGACACCCCACCC+GGG | + | chr8_4:6959838-6959857 | None:intergenic | 70.0% | |
GGTGGGCCAAGGACGTACCC+GGG | - | chr8_4:6959818-6959837 | Msa1310310:CDS | 70.0% | |
GGCCAAGGACGTACCCGGGT+GGG | - | chr8_4:6959822-6959841 | Msa1310310:CDS | 70.0% | |
GCCAAGGACGTACCCGGGTG+GGG | - | chr8_4:6959823-6959842 | Msa1310310:CDS | 70.0% | |
ACCCCACCCGGGTACGTCCT+TGG | + | chr8_4:6959827-6959846 | None:intergenic | 70.0% | |
! | ACCCGGGTGGGGTGTCCAAG+TGG | - | chr8_4:6959834-6959853 | Msa1310310:CDS | 70.0% |
GCCACTTGGACACCCCACCC+GGG | + | chr8_4:6959838-6959857 | None:intergenic | 70.0% | |
GGGCCAAGGACGTACCCGGG+TGG | - | chr8_4:6959821-6959840 | Msa1310310:CDS | 75.0% | |
AGGCGCGACTGTGCCGGGAG+CGG | - | chr8_4:6959900-6959919 | Msa1310310:CDS | 75.0% | |
GGGCCAAGGACGTACCCGGG+TGG | - | chr8_4:6959821-6959840 | Msa1310310:CDS | 75.0% | |
AGGCGCGACTGTGCCGGGAG+CGG | - | chr8_4:6959900-6959919 | Msa1310310:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_4 | gene | 6959435 | 6961137 | 6959435 | ID=Msa1310310;Name=Msa1310310 |
chr8_4 | mRNA | 6959435 | 6961137 | 6959435 | ID=Msa1310310-mRNA-1;Parent=Msa1310310;Name=Msa1310310-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0|0|0.33|1|1|3|0|512 |
chr8_4 | exon | 6961132 | 6961137 | 6961132 | ID=Msa1310310-mRNA-1:exon:2421;Parent=Msa1310310-mRNA-1 |
chr8_4 | exon | 6961023 | 6961031 | 6961023 | ID=Msa1310310-mRNA-1:exon:2420;Parent=Msa1310310-mRNA-1 |
chr8_4 | exon | 6959435 | 6960958 | 6959435 | ID=Msa1310310-mRNA-1:exon:2419;Parent=Msa1310310-mRNA-1 |
chr8_4 | CDS | 6961132 | 6961137 | 6961132 | ID=Msa1310310-mRNA-1:cds;Parent=Msa1310310-mRNA-1 |
chr8_4 | CDS | 6961023 | 6961031 | 6961023 | ID=Msa1310310-mRNA-1:cds;Parent=Msa1310310-mRNA-1 |
chr8_4 | CDS | 6959435 | 6960958 | 6959435 | ID=Msa1310310-mRNA-1:cds;Parent=Msa1310310-mRNA-1 |
Gene Sequence |
Protein sequence |