AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1333430


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1333430 MtrunA17_Chr4g0054741 97.328 524 14 0 1 524 11 534 0.0 1055
Msa1333430 MtrunA17_Chr4g0054771 87.696 382 47 0 141 522 3 384 0.0 675
Msa1333430 MtrunA17_Chr5g0400471 72.591 467 87 6 95 524 3 465 0.0 639
Msa1333430 MtrunA17_Chr1g0212201 57.836 536 212 4 1 524 3 536 0.0 624
Msa1333430 MtrunA17_Chr1g0212251 58.912 533 200 6 6 524 5 532 0.0 615
Msa1333430 MtrunA17_Chr1g0212291 58.473 537 205 5 1 522 1 534 0.0 598
Msa1333430 MtrunA17_Chr1g0188881 35.258 485 251 9 15 494 23 449 3.47e-96 300
Msa1333430 MtrunA17_Chr4g0025591 44.807 337 179 4 26 360 29 360 1.00e-92 291
Msa1333430 MtrunA17_Chr1g0188871 38.791 397 220 5 13 392 4 394 1.09e-92 291
Msa1333430 MtrunA17_Chr7g0267471 43.314 344 185 3 39 379 42 378 6.87e-87 276
Msa1333430 MtrunA17_Chr2g0321971 36.765 408 241 7 39 436 37 437 1.83e-84 269
Msa1333430 MtrunA17_Chr6g0484691 32.696 523 298 10 12 495 69 576 4.21e-81 264
Msa1333430 MtrunA17_Chr1g0210101 34.086 487 286 10 38 501 112 586 9.53e-80 260
Msa1333430 MtrunA17_Chr7g0259731 39.881 336 181 6 44 371 61 383 9.78e-80 256
Msa1333430 MtrunA17_Chr2g0321961 39.595 346 201 4 39 381 37 377 4.93e-79 254
Msa1333430 MtrunA17_Chr8g0390931 33.400 497 279 9 39 495 59 543 1.03e-78 257
Msa1333430 MtrunA17_Chr8g0390921 32.227 512 302 11 25 495 46 553 2.82e-75 248
Msa1333430 MtrunA17_Chr4g0054761 90.780 141 13 0 1 141 11 151 6.12e-69 218
Msa1333430 MtrunA17_Chr8g0390901 31.891 439 261 9 93 495 9 445 6.38e-64 215
Msa1333430 MtrunA17_Chr5g0400481 69.474 95 29 0 4 98 22 116 5.41e-42 146
Msa1333430 MtrunA17_Chr8g0390911 45.070 71 38 1 25 94 50 120 7.14e-15 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1333430 AT4G17970.1 63.653 531 138 6 10 496 14 533 0.0 662
Msa1333430 AT5G46610.1 59.335 541 173 8 1 509 10 535 0.0 613
Msa1333430 AT5G46600.1 57.331 532 196 5 2 506 9 536 0.0 602
Msa1333430 AT5G46610.2 55.638 541 169 9 1 509 10 511 0.0 558
Msa1333430 AT5G46610.3 52.495 541 163 9 1 509 10 488 1.66e-178 511
Msa1333430 AT4G00910.1 35.356 478 256 7 35 509 54 481 9.39e-96 299
Msa1333430 AT1G08440.1 43.218 317 176 2 39 353 13 327 2.46e-88 281
Msa1333430 AT3G18440.1 33.204 515 303 9 33 508 73 585 4.11e-83 270
Msa1333430 AT1G08430.1 38.551 345 208 2 39 379 13 357 6.11e-80 258
Msa1333430 AT1G18420.1 34.000 500 288 12 36 495 80 577 1.88e-79 259
Msa1333430 AT3G11680.2 39.726 365 213 2 17 379 16 375 5.24e-78 253
Msa1333430 AT3G11680.1 39.726 365 213 2 17 379 14 373 5.24e-78 253
Msa1333430 AT1G18420.2 33.871 496 286 12 40 495 1 494 6.58e-78 253
Msa1333430 AT2G27240.2 40.413 339 184 4 39 369 13 341 9.55e-76 247
Msa1333430 AT2G27240.1 38.017 363 185 5 39 369 13 367 1.92e-72 239
Msa1333430 AT2G17470.1 31.006 487 304 11 39 498 31 512 4.42e-68 229
Msa1333430 AT2G17470.2 31.006 487 304 11 39 498 53 534 7.35e-68 228
Msa1333430 AT1G68600.1 29.714 525 324 14 10 495 11 529 1.06e-65 222
Msa1333430 AT1G25480.1 30.800 500 303 12 34 495 47 541 1.74e-65 222
Msa1333430 AT4G17585.1 63.529 85 26 2 10 93 14 94 1.89e-23 97.1

Find 127 sgRNAs with CRISPR-Local

Find 207 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCTTCAGCTTTGTTAAAT+TGG 0.126341 8_4:-53552030 Msa1333430:CDS
ATCTGTTCGAGTCCTGTTTA+AGG 0.156833 8_4:-53552302 Msa1333430:CDS
TCATAATTCTTCTTTATATA+AGG 0.201014 8_4:+53553653 None:intergenic
GTATTGGCCAAAATGCTATT+TGG 0.201944 8_4:-53554446 Msa1333430:CDS
TGTATCATTGCTTTATATAT+TGG 0.204199 8_4:-53554484 Msa1333430:CDS
GCCTTATAACCTTTGTATAT+TGG 0.218651 8_4:+53553256 None:intergenic
CAAAGGTTATAAGGCTGTTT+TGG 0.221522 8_4:-53553248 Msa1333430:CDS
CTGTTCAGCTGATACACTTT+TGG 0.231447 8_4:+53552003 None:intergenic
GGAAATGTTCTTCGCCAATT+TGG 0.242345 8_4:-53552863 Msa1333430:CDS
ATATTGGAGCCACTCTTTAA+AGG 0.248165 8_4:-53554468 Msa1333430:CDS
CGGCATACCTTCTATAGATT+TGG 0.257767 8_4:+53553424 None:intergenic
GACACTATTAGCAGGATTAT+TGG 0.267423 8_4:-53554147 Msa1333430:CDS
AGATGATCAGAGAGTATTTC+TGG 0.270507 8_4:+53552196 None:intergenic
TGACAGCCCAAATAGCATTT+TGG 0.284563 8_4:+53554439 None:intergenic
GATTATGTTGCAAATGCTTC+TGG 0.287896 8_4:-53554113 Msa1333430:CDS
AGGTCTTCCCCTGACCAATT+TGG 0.290568 8_4:+53553482 None:intergenic
ATAAAGAAGAATTATGATTA+TGG 0.291591 8_4:-53553647 Msa1333430:CDS
AATGCATGGATCACCCTTCT+TGG 0.296126 8_4:+53554531 None:intergenic
GAAACCAAGAGTTGATGTTT+TGG 0.300117 8_4:-53551750 Msa1333430:CDS
TCCAATATACAAAGGTTATA+AGG 0.319254 8_4:-53553257 Msa1333430:CDS
CTACTCCATGAGAAGGTAAA+TGG 0.323183 8_4:+53551723 None:intergenic
ATGTTATGCTACCTGAATTT+CGG 0.325615 8_4:+53552805 None:intergenic
GCTTAAAAGGATTCCTTGTT+TGG 0.330987 8_4:-53554589 Msa1333430:CDS
CTGTTTGAGAACCGAAATTC+AGG 0.333743 8_4:-53552816 Msa1333430:intron
TGTTAACTGTTTCAAGTTAC+CGG 0.336402 8_4:-53553595 Msa1333430:CDS
GAAATGTTCTTCGCCAATTT+GGG 0.342154 8_4:-53552862 Msa1333430:CDS
GTTGGGAGCCAAGGCATTCT+AGG 0.347134 8_4:-53552925 Msa1333430:CDS
TGCTTCTTTGCTTGTGGAAA+CGG 0.348987 8_4:-53551873 Msa1333430:CDS
CTACCACTGTATACCCAAAT+TGG 0.350168 8_4:+53552849 None:intergenic
GTTGTTTGCTTGGATGTCAT+TGG 0.352489 8_4:+53552111 None:intergenic
TGTGGAAACGGTGGCAAAAC+TGG 0.354584 8_4:-53551861 Msa1333430:CDS
GAGCCACTCTTTAAAGGTAT+TGG 0.357520 8_4:-53554462 Msa1333430:CDS
AAAGGATTCCTTGTTTGGTT+TGG 0.357623 8_4:-53554584 Msa1333430:CDS
TCCACAGCTTTCAAACTTGA+AGG 0.368733 8_4:-53553452 Msa1333430:CDS
TATTGGCCAAAATGCTATTT+GGG 0.383356 8_4:-53554445 Msa1333430:CDS
TTAGTATTTCCAAATTGGTC+AGG 0.390261 8_4:-53553491 Msa1333430:CDS
TCTCAACCACGACTCTTCTT+AGG 0.410653 8_4:-53552136 Msa1333430:CDS
AAAGGGCTGAATAGAGGATT+GGG 0.415501 8_4:-53554170 Msa1333430:CDS
TTATGCAAGGGTCCTTAAAC+AGG 0.417088 8_4:+53552290 None:intergenic
TTCTCCAAAACATCAACTCT+TGG 0.424004 8_4:+53551746 None:intergenic
GTGGCGAAAACCTTGAGAAA+TGG 0.439639 8_4:-53554641 Msa1333430:CDS
AAAGAAGCAAAAGCAGCAAA+AGG 0.440203 8_4:+53551887 None:intergenic
GGCCTAGCCAAATCTATAGA+AGG 0.440228 8_4:-53553431 Msa1333430:intron
TGAAACAGTTAACAAGTTGA+AGG 0.442800 8_4:+53553604 None:intergenic
TTAACAAGTTGAAGGTTAAG+AGG 0.444355 8_4:+53553612 None:intergenic
ATTGACGAAGTTGAAGAACT+TGG 0.456183 8_4:-53551830 Msa1333430:CDS
TGTTTAAGGACCCTTGCATA+AGG 0.456552 8_4:-53552288 Msa1333430:CDS
CTTTCCATGAGAGGCGGCTA+TGG 0.460245 8_4:+53552078 None:intergenic
AAAGGAAGAAGAACAATTAC+CGG 0.462474 8_4:-53551978 Msa1333430:CDS
CGCTTCTTCACCATAGCCAT+TGG 0.466959 8_4:-53553542 Msa1333430:CDS
GAGAACCATTTACCTTCTCA+TGG 0.469642 8_4:-53551728 Msa1333430:CDS
TGGCGAGCATGTTGTTTGCT+TGG 0.473062 8_4:+53552101 None:intergenic
ATTTAACAAAGCTGAAGAAT+CGG 0.475562 8_4:+53552033 None:intergenic
CAAAGGGCTGAATAGAGGAT+TGG 0.475828 8_4:-53554171 Msa1333430:CDS
TTATGCAAAGGGCTGAATAG+AGG 0.477408 8_4:-53554176 Msa1333430:CDS
GTGATCCATGCATTCAAAGT+TGG 0.477949 8_4:-53554522 Msa1333430:CDS
TCGCAACAGTATGTAAAAGT+TGG 0.479295 8_4:-53552884 Msa1333430:CDS
CGGTTCTCAAACAGCCATGT+AGG 0.484364 8_4:+53552825 None:intergenic
GATCTACGGCCACTTATATG+AGG 0.485172 8_4:-53553682 Msa1333430:CDS
GCCACCATAGCCGCCTCTCA+TGG 0.486291 8_4:-53552082 Msa1333430:CDS
GTTGTGTATGGCAGGATCTA+CGG 0.486401 8_4:-53553696 Msa1333430:intron
GTAGGCATTGCATGCAAGTT+GGG 0.489768 8_4:-53552942 Msa1333430:intron
TGGAGTAGAGTGATTCTGAA+TGG 0.494182 8_4:-53551708 Msa1333430:exon
TGCATGCAAGTTGGGAGCCA+AGG 0.495437 8_4:-53552934 Msa1333430:CDS
GAGTGATTCTGAATGGGAGC+AGG 0.500396 8_4:-53551701 Msa1333430:exon
GTTTGGTTTGGAAGACTACA+TGG 0.504622 8_4:-53554572 Msa1333430:CDS
TACGTTTCTTCCATTTCTCA+AGG 0.504702 8_4:+53554631 None:intergenic
GCCTTCAAGTTTGAAAGCTG+TGG 0.506523 8_4:+53553451 None:intergenic
GCGCCGACTTCTTATGCTGT+TGG 0.511246 8_4:+53552228 None:intergenic
TCCATGAGAGGCGGCTATGG+TGG 0.516245 8_4:+53552081 None:intergenic
AGTTGAAGAACTTGGGAGGT+TGG 0.516985 8_4:-53551822 Msa1333430:CDS
AAGACTCATGAAAAGACAAA+TGG 0.520278 8_4:+53553514 None:intergenic
ATAAACCAACTTTGAATGCA+TGG 0.520687 8_4:+53554517 None:intergenic
GCTTACCAATGTTTCATCTG+TGG 0.526234 8_4:+53553216 None:intergenic
TAGTATTTCCAAATTGGTCA+GGG 0.528241 8_4:-53553490 Msa1333430:CDS
AATGGCACAGCCAATGGCTA+TGG 0.530289 8_4:+53553532 None:intergenic
GGAGTAGAGTGATTCTGAAT+GGG 0.536354 8_4:-53551707 Msa1333430:exon
TATCATCAGACTATTTACTC+TGG 0.536898 8_4:-53551593 Msa1333430:three_prime_UTR
TTGACGAAGTTGAAGAACTT+GGG 0.540827 8_4:-53551829 Msa1333430:CDS
AAGACAAATGGCACAGCCAA+TGG 0.541186 8_4:+53553526 None:intergenic
TGACAGTACCTAGAATGCCT+TGG 0.545491 8_4:+53552917 None:intergenic
GGTTCTCAAACAGCCATGTA+GGG 0.547487 8_4:+53552826 None:intergenic
AGGAACAAACCTCATATAAG+TGG 0.549594 8_4:+53553673 None:intergenic
CAGGGGCAACTTTATGCAAA+GGG 0.551257 8_4:-53554187 Msa1333430:CDS
TCTGCTGCTAGCCTTATGCA+AGG 0.556979 8_4:+53552277 None:intergenic
TATACAGTGGTAGCCCTACA+TGG 0.561138 8_4:-53552839 Msa1333430:CDS
GGATTGGGGACACTATTAGC+AGG 0.564656 8_4:-53554155 Msa1333430:CDS
TGTAGGCATTGCATGCAAGT+TGG 0.564912 8_4:-53552943 Msa1333430:intron
AGAACAATTACCGGTACGTA+AGG 0.566107 8_4:-53551969 Msa1333430:CDS
TGGCCAATACCTTTAAAGAG+TGG 0.568510 8_4:+53554459 None:intergenic
GGTTGATCATGTCTTGAAGA+TGG 0.569323 8_4:-53553573 Msa1333430:CDS
AACAGGACTCGAACAGATTG+TGG 0.571380 8_4:+53552307 None:intergenic
GCAGGGGCAACTTTATGCAA+AGG 0.574504 8_4:-53554188 Msa1333430:intron
GTTAACTGTTTCAAGTTACC+GGG 0.574845 8_4:-53553594 Msa1333430:CDS
AAAATCCACAGATGAAACAT+TGG 0.576415 8_4:-53553221 Msa1333430:intron
TTTCTCAACACCTTACGTAC+CGG 0.581127 8_4:+53551959 None:intergenic
GAGTGAGCTCTTTCCATGAG+AGG 0.583770 8_4:+53552069 None:intergenic
TCGGATGTGATGATCCAAGA+AGG 0.583906 8_4:-53554545 Msa1333430:CDS
TTGCATAAGGCTAGCAGCAG+AGG 0.586458 8_4:-53552275 Msa1333430:CDS
TTCTTTGCTTGTGGAAACGG+TGG 0.592923 8_4:-53551870 Msa1333430:CDS
CTAATAGAAAACTCATCACC+AGG 0.594652 8_4:+53551779 None:intergenic
TACCTTCTATAGATTTGGCT+AGG 0.594807 8_4:+53553429 None:intergenic
AGAGTATTTCTGGTGAGCAA+TGG 0.601068 8_4:+53552206 None:intergenic
TGTATCAGCTGAACAGACAA+AGG 0.608885 8_4:-53551996 Msa1333430:CDS
GGTGATATAAAATCATCTGA+AGG 0.611420 8_4:-53553280 Msa1333430:CDS
CTGCTGCTAGCCTTATGCAA+GGG 0.615929 8_4:+53552278 None:intergenic
TGGAAGACTACATGGAAGGT+CGG 0.617088 8_4:-53554564 Msa1333430:CDS
GGTTTGGAAGACTACATGGA+AGG 0.620257 8_4:-53554568 Msa1333430:CDS
TGAAAGCTGTGGAATGATGA+AGG 0.622018 8_4:+53553462 None:intergenic
CGGATGTGATGATCCAAGAA+GGG 0.624692 8_4:-53554544 Msa1333430:CDS
GAAGAATTATGATTATGGTG+TGG 0.626346 8_4:-53553642 Msa1333430:CDS
GGCTGTCATGACTGTCGTCG+TGG 0.630752 8_4:-53554424 Msa1333430:CDS
GTAGTCTTCCAAACCAAACA+AGG 0.632776 8_4:+53554576 None:intergenic
ACGAAGTTGAAGAACTTGGG+AGG 0.635974 8_4:-53551826 Msa1333430:CDS
AGTGATTCTGAATGGGAGCA+GGG 0.636257 8_4:-53551700 Msa1333430:exon
AATCACTCTACTCCATGAGA+AGG 0.644576 8_4:+53551716 None:intergenic
TAGCCAACAGCATAAGAAGT+CGG 0.647738 8_4:-53552231 Msa1333430:CDS
AGTATTTCCAAATTGGTCAG+GGG 0.650407 8_4:-53553489 Msa1333430:CDS
TGTTTCAAAGAGTATACACC+TGG 0.658227 8_4:-53551797 Msa1333430:CDS
TTGGAGCCTAAGAAGAGTCG+TGG 0.661184 8_4:+53552130 None:intergenic
CAATGGCTATGGTGAAGAAG+CGG 0.662768 8_4:+53553543 None:intergenic
TCTGAAGGTCCAATATACAA+AGG 0.663082 8_4:-53553265 Msa1333430:CDS
TGAGCTCTTTCCATGAGAGG+CGG 0.667299 8_4:+53552072 None:intergenic
AAGGGCTGAATAGAGGATTG+GGG 0.679447 8_4:-53554169 Msa1333430:CDS
TCGCCAATTTGGGTATACAG+TGG 0.681644 8_4:-53552852 Msa1333430:CDS
GCTATGGCTAGGAATAAGAG+TGG 0.690552 8_4:-53554660 Msa1333430:CDS
TCTTCAAGACATGATCAACC+CGG 0.698255 8_4:+53553576 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAATAAATAAATATTTATC+AGG + chr8_4:53553212-53553231 None:intergenic 10.0%
!!! TATATATTTGATAACCAAAA+TGG - chr8_4:53552205-53552224 Msa1333430:CDS 15.0%
!! TCATAATTCTTCTTTATATA+AGG + chr8_4:53552597-53552616 None:intergenic 15.0%
!! ATAAAGAAGAATTATGATTA+TGG - chr8_4:53552600-53552619 Msa1333430:intron 15.0%
!! ATAGTAGTTATATTTATAAG+TGG - chr8_4:53553591-53553610 Msa1333430:CDS 15.0%
!! TAGTAGTTATATTTATAAGT+GGG - chr8_4:53553592-53553611 Msa1333430:CDS 15.0%
!! GGATAATAAATTGAATTAAA+AGG + chr8_4:53553910-53553929 None:intergenic 15.0%
!! TGTATCATTGCTTTATATAT+TGG - chr8_4:53551763-53551782 Msa1333430:CDS 20.0%
!!! AATACTATTTGAGTTTAGAT+AGG + chr8_4:53551876-53551895 None:intergenic 20.0%
!!! TACTTTTTCATCTATGATAT+TGG - chr8_4:53551902-53551921 Msa1333430:CDS 20.0%
!!! TTACTATATTGTTTCTATCA+TGG + chr8_4:53551992-53552011 None:intergenic 20.0%
!!! ATTTGTAATTTTTTTATGGC+AGG - chr8_4:53552041-53552060 Msa1333430:CDS 20.0%
!!! TTTGTAATTTTTTTATGGCA+GGG - chr8_4:53552042-53552061 Msa1333430:CDS 20.0%
!! TTTGAGCAATTTATAACAAA+GGG + chr8_4:53552260-53552279 None:intergenic 20.0%
!! ATTTGAGCAATTTATAACAA+AGG + chr8_4:53552261-53552280 None:intergenic 20.0%
!!! ATTTTGACAACAAATATTGT+CGG + chr8_4:53552399-53552418 None:intergenic 20.0%
!! AAACTTATCGAAATTATTTG+TGG - chr8_4:53552514-53552533 Msa1333430:intron 20.0%
!! TATATTAGCAACTTATTGTA+AGG - chr8_4:53552888-53552907 Msa1333430:CDS 20.0%
!!! TGTGTCAATGAATATTTTTA+TGG - chr8_4:53552928-53552947 Msa1333430:CDS 20.0%
!! ATAATATCTTGATCTTCAAA+TGG - chr8_4:53553266-53553285 Msa1333430:CDS 20.0%
!! TATTCCATCAATGAATATAA+AGG + chr8_4:53553552-53553571 None:intergenic 20.0%
!! ATTTGATACGTCTTAAAATT+TGG + chr8_4:53553667-53553686 None:intergenic 20.0%
!! TAGTTGTAGAAATATGAAAA+AGG - chr8_4:53553817-53553836 Msa1333430:intron 20.0%
! AAAATACAAATAAATGCGAC+CGG - chr8_4:53551929-53551948 Msa1333430:CDS 25.0%
!!! TTGTAATTTTTTTATGGCAG+GGG - chr8_4:53552043-53552062 Msa1333430:CDS 25.0%
!! TAACTTTAGTAGAACCATTT+TGG + chr8_4:53552222-53552241 None:intergenic 25.0%
!! ATAACAAAGGGAAATTTTCA+TGG + chr8_4:53552248-53552267 None:intergenic 25.0%
!! ATTTCGATAAGTTTTCGAAT+TGG + chr8_4:53552508-53552527 None:intergenic 25.0%
!! GTCTTTTAGTATTTCCAAAT+TGG - chr8_4:53552751-53552770 Msa1333430:intron 25.0%
! CTATGTATGTGTTATGAATT+CGG + chr8_4:53552846-53552865 None:intergenic 25.0%
! TAACACATACATAGTATCAA+AGG - chr8_4:53552852-53552871 Msa1333430:CDS 25.0%
! TATGGAAAAATTGAAGTTTC+TGG - chr8_4:53552946-53552965 Msa1333430:intron 25.0%
! TCCAATATACAAAGGTTATA+AGG - chr8_4:53552990-53553009 Msa1333430:intron 25.0%
! GATACCTTTATATTCATTGA+TGG - chr8_4:53553545-53553564 Msa1333430:CDS 25.0%
! ACGTATCAAATTATGTTGTT+GGG - chr8_4:53553676-53553695 Msa1333430:CDS 25.0%
! AATTTAGACTTATCTTTGAG+TGG + chr8_4:53553717-53553736 None:intergenic 25.0%
!!! TTAGAATTTGCTAAATCGTA+GGG + chr8_4:53553783-53553802 None:intergenic 25.0%
! ATTTAACAAAGCTGAAGAAT+CGG + chr8_4:53554217-53554236 None:intergenic 25.0%
!!! ATTCTTCAGCTTTGTTAAAT+TGG - chr8_4:53554217-53554236 Msa1333430:intron 25.0%
! AAGAAACGTATCCATGTTTT+TGG - chr8_4:53551629-53551648 Msa1333430:three_prime_UTR 30.0%
ATAAACCAACTTTGAATGCA+TGG + chr8_4:53551733-53551752 None:intergenic 30.0%
! TATTGGCCAAAATGCTATTT+GGG - chr8_4:53551802-53551821 Msa1333430:CDS 30.0%
TTTCGAATTGGTTACAATTG+AGG + chr8_4:53552496-53552515 None:intergenic 30.0%
!! TCCTGTTAATTTGTTGTGTA+TGG - chr8_4:53552539-53552558 Msa1333430:intron 30.0%
GAAGAATTATGATTATGGTG+TGG - chr8_4:53552605-53552624 Msa1333430:intron 30.0%
! TTAACAAGTTGAAGGTTAAG+AGG + chr8_4:53552638-53552657 None:intergenic 30.0%
! TGAAACAGTTAACAAGTTGA+AGG + chr8_4:53552646-53552665 None:intergenic 30.0%
!! TGTTAACTGTTTCAAGTTAC+CGG - chr8_4:53552652-53552671 Msa1333430:intron 30.0%
AAGACTCATGAAAAGACAAA+TGG + chr8_4:53552736-53552755 None:intergenic 30.0%
TTAGTATTTCCAAATTGGTC+AGG - chr8_4:53552756-53552775 Msa1333430:intron 30.0%
TAGTATTTCCAAATTGGTCA+GGG - chr8_4:53552757-53552776 Msa1333430:intron 30.0%
GGTGATATAAAATCATCTGA+AGG - chr8_4:53552967-53552986 Msa1333430:intron 30.0%
GCCTTATAACCTTTGTATAT+TGG + chr8_4:53552994-53553013 None:intergenic 30.0%
AAAATCCACAGATGAAACAT+TGG - chr8_4:53553026-53553045 Msa1333430:intron 30.0%
TGAATGGATCAAAACAAGAT+TGG + chr8_4:53553059-53553078 None:intergenic 30.0%
! ATACTTGGCATGATTTTGAA+TGG + chr8_4:53553075-53553094 None:intergenic 30.0%
AGTGTGAGCTATATTATACT+TGG + chr8_4:53553090-53553109 None:intergenic 30.0%
ATGTTATGCTACCTGAATTT+CGG + chr8_4:53553445-53553464 None:intergenic 30.0%
ACTATTTGAACTAGTCAAAG+TGG + chr8_4:53553576-53553595 None:intergenic 30.0%
AATTCCAAAAGCAAATTCAC+GGG + chr8_4:53553629-53553648 None:intergenic 30.0%
CAATTCCAAAAGCAAATTCA+CGG + chr8_4:53553630-53553649 None:intergenic 30.0%
GACGTATCAAATTATGTTGT+TGG - chr8_4:53553675-53553694 Msa1333430:CDS 30.0%
!! CTTAGAATTTGCTAAATCGT+AGG + chr8_4:53553784-53553803 None:intergenic 30.0%
AAAGGAAGAAGAACAATTAC+CGG - chr8_4:53554269-53554288 Msa1333430:intron 30.0%
TATCATCAGACTATTTACTC+TGG - chr8_4:53554654-53554673 Msa1333430:CDS 30.0%
TACGTTTCTTCCATTTCTCA+AGG + chr8_4:53551619-53551638 None:intergenic 35.0%
!! TTTTTGGTGAGAGGCTTAAA+AGG - chr8_4:53551645-53551664 Msa1333430:three_prime_UTR 35.0%
GCTTAAAAGGATTCCTTGTT+TGG - chr8_4:53551658-53551677 Msa1333430:three_prime_UTR 35.0%
! AAAGGATTCCTTGTTTGGTT+TGG - chr8_4:53551663-53551682 Msa1333430:three_prime_UTR 35.0%
ATATTGGAGCCACTCTTTAA+AGG - chr8_4:53551779-53551798 Msa1333430:CDS 35.0%
! GTATTGGCCAAAATGCTATT+TGG - chr8_4:53551801-53551820 Msa1333430:CDS 35.0%
GACACTATTAGCAGGATTAT+TGG - chr8_4:53552100-53552119 Msa1333430:CDS 35.0%
GATTATGTTGCAAATGCTTC+TGG - chr8_4:53552134-53552153 Msa1333430:CDS 35.0%
! GCAGTTGCAGTTTTTGTAAT+AGG - chr8_4:53552182-53552201 Msa1333430:CDS 35.0%
CTTTCTTTCAATCACATCGA+CGG + chr8_4:53552333-53552352 None:intergenic 35.0%
GCCATACACAACAAATTAAC+AGG + chr8_4:53552543-53552562 None:intergenic 35.0%
!! GTTAATTTGTTGTGTATGGC+AGG - chr8_4:53552543-53552562 Msa1333430:intron 35.0%
AGGAACAAACCTCATATAAG+TGG + chr8_4:53552577-53552596 None:intergenic 35.0%
!! GTTAACTGTTTCAAGTTACC+GGG - chr8_4:53552653-53552672 Msa1333430:intron 35.0%
AGTATTTCCAAATTGGTCAG+GGG - chr8_4:53552758-53552777 Msa1333430:intron 35.0%
TACCTTCTATAGATTTGGCT+AGG + chr8_4:53552821-53552840 None:intergenic 35.0%
TCTGAAGGTCCAATATACAA+AGG - chr8_4:53552982-53553001 Msa1333430:intron 35.0%
! CAAAGGTTATAAGGCTGTTT+TGG - chr8_4:53552999-53553018 Msa1333430:intron 35.0%
GACTTAGTACGCATAATTTG+TGG + chr8_4:53553156-53553175 None:intergenic 35.0%
! GGTTGTGTTTTCAATTGTGT+AGG - chr8_4:53553287-53553306 Msa1333430:CDS 35.0%
! ACTTTTACATACTGTTGCGA+TGG + chr8_4:53553363-53553382 None:intergenic 35.0%
TCGCAACAGTATGTAAAAGT+TGG - chr8_4:53553363-53553382 Msa1333430:intron 35.0%
GAAATGTTCTTCGCCAATTT+GGG - chr8_4:53553385-53553404 Msa1333430:intron 35.0%
CACAGACAGATTCACAAAAA+TGG + chr8_4:53553490-53553509 None:intergenic 35.0%
ATTCCAAAAGCAAATTCACG+GGG + chr8_4:53553628-53553647 None:intergenic 35.0%
!! AGATGATCAGAGAGTATTTC+TGG + chr8_4:53554054-53554073 None:intergenic 35.0%
AAAGAAGCAAAAGCAGCAAA+AGG + chr8_4:53554363-53554382 None:intergenic 35.0%
ATTGACGAAGTTGAAGAACT+TGG - chr8_4:53554417-53554436 Msa1333430:CDS 35.0%
TTGACGAAGTTGAAGAACTT+GGG - chr8_4:53554418-53554437 Msa1333430:CDS 35.0%
! TGTTTCAAAGAGTATACACC+TGG - chr8_4:53554450-53554469 Msa1333430:CDS 35.0%
CTAATAGAAAACTCATCACC+AGG + chr8_4:53554471-53554490 None:intergenic 35.0%
!!! GAAACCAAGAGTTGATGTTT+TGG - chr8_4:53554497-53554516 Msa1333430:CDS 35.0%
TTCTCCAAAACATCAACTCT+TGG + chr8_4:53554504-53554523 None:intergenic 35.0%
!!! GTATCCATGTTTTTGGTGAG+AGG - chr8_4:53551636-53551655 Msa1333430:three_prime_UTR 40.0%
TAAGCCTCTCACCAAAAACA+TGG + chr8_4:53551643-53551662 None:intergenic 40.0%
GTAGTCTTCCAAACCAAACA+AGG + chr8_4:53551674-53551693 None:intergenic 40.0%
!! GTTTGGTTTGGAAGACTACA+TGG - chr8_4:53551675-53551694 Msa1333430:three_prime_UTR 40.0%
GTGATCCATGCATTCAAAGT+TGG - chr8_4:53551725-53551744 Msa1333430:CDS 40.0%
! GAGCCACTCTTTAAAGGTAT+TGG - chr8_4:53551785-53551804 Msa1333430:CDS 40.0%
! TGGCCAATACCTTTAAAGAG+TGG + chr8_4:53551791-53551810 None:intergenic 40.0%
! TGACAGCCCAAATAGCATTT+TGG + chr8_4:53551811-53551830 None:intergenic 40.0%
ACAAATAAATGCGACCGGTA+CGG - chr8_4:53551934-53551953 Msa1333430:CDS 40.0%
TTATGCAAAGGGCTGAATAG+AGG - chr8_4:53552071-53552090 Msa1333430:CDS 40.0%
AAAGGGCTGAATAGAGGATT+GGG - chr8_4:53552077-53552096 Msa1333430:CDS 40.0%
GCTACAAGATAGTGCAAAGA+AGG + chr8_4:53552462-53552481 None:intergenic 40.0%
TCTTCAAGACATGATCAACC+CGG + chr8_4:53552674-53552693 None:intergenic 40.0%
GGTTGATCATGTCTTGAAGA+TGG - chr8_4:53552674-53552693 Msa1333430:intron 40.0%
TGAAAGCTGTGGAATGATGA+AGG + chr8_4:53552788-53552807 None:intergenic 40.0%
TCCACAGCTTTCAAACTTGA+AGG - chr8_4:53552795-53552814 Msa1333430:intron 40.0%
CGGCATACCTTCTATAGATT+TGG + chr8_4:53552826-53552845 None:intergenic 40.0%
GCTTACCAATGTTTCATCTG+TGG + chr8_4:53553034-53553053 None:intergenic 40.0%
ATATAGCTCACACTAAGAGC+TGG - chr8_4:53553096-53553115 Msa1333430:intron 40.0%
GGAAATGTTCTTCGCCAATT+TGG - chr8_4:53553384-53553403 Msa1333430:intron 40.0%
CTACCACTGTATACCCAAAT+TGG + chr8_4:53553401-53553420 None:intergenic 40.0%
CTGTTTGAGAACCGAAATTC+AGG - chr8_4:53553431-53553450 Msa1333430:intron 40.0%
AAATAACTCCCGCGTAAAGT+GGG - chr8_4:53553746-53553765 Msa1333430:intron 40.0%
TTTGCTAAATCGTAGGGTGA+AGG + chr8_4:53553777-53553796 None:intergenic 40.0%
ACAGATTGTGGTGTCTGAAA+AGG + chr8_4:53553931-53553950 None:intergenic 40.0%
ATCTGTTCGAGTCCTGTTTA+AGG - chr8_4:53553945-53553964 Msa1333430:intron 40.0%
TTATGCAAGGGTCCTTAAAC+AGG + chr8_4:53553960-53553979 None:intergenic 40.0%
TGTTTAAGGACCCTTGCATA+AGG - chr8_4:53553959-53553978 Msa1333430:intron 40.0%
TAGCCAACAGCATAAGAAGT+CGG - chr8_4:53554016-53554035 Msa1333430:intron 40.0%
!! AGAGTATTTCTGGTGAGCAA+TGG + chr8_4:53554044-53554063 None:intergenic 40.0%
! GAGTCGTGGTTGAGATTTTA+TGG + chr8_4:53554106-53554125 None:intergenic 40.0%
GTTGTTTGCTTGGATGTCAT+TGG + chr8_4:53554139-53554158 None:intergenic 40.0%
! CTGTTCAGCTGATACACTTT+TGG + chr8_4:53554247-53554266 None:intergenic 40.0%
TGTATCAGCTGAACAGACAA+AGG - chr8_4:53554251-53554270 Msa1333430:intron 40.0%
AGAACAATTACCGGTACGTA+AGG - chr8_4:53554278-53554297 Msa1333430:intron 40.0%
TTTCTCAACACCTTACGTAC+CGG + chr8_4:53554291-53554310 None:intergenic 40.0%
! TGCTTTTGCTTCTTTGCTTG+TGG - chr8_4:53554368-53554387 Msa1333430:intron 40.0%
TGCTTCTTTGCTTGTGGAAA+CGG - chr8_4:53554374-53554393 Msa1333430:intron 40.0%
GAGAACCATTTACCTTCTCA+TGG - chr8_4:53554519-53554538 Msa1333430:CDS 40.0%
CTACTCCATGAGAAGGTAAA+TGG + chr8_4:53554527-53554546 None:intergenic 40.0%
AATCACTCTACTCCATGAGA+AGG + chr8_4:53554534-53554553 None:intergenic 40.0%
TGGAGTAGAGTGATTCTGAA+TGG - chr8_4:53554539-53554558 Msa1333430:CDS 40.0%
GGAGTAGAGTGATTCTGAAT+GGG - chr8_4:53554540-53554559 Msa1333430:CDS 40.0%
GCTATGGCTAGGAATAAGAG+TGG - chr8_4:53551587-53551606 Msa1333430:three_prime_UTR 45.0%
GTGGCGAAAACCTTGAGAAA+TGG - chr8_4:53551606-53551625 Msa1333430:three_prime_UTR 45.0%
GGTTTGGAAGACTACATGGA+AGG - chr8_4:53551679-53551698 Msa1333430:three_prime_UTR 45.0%
TGGAAGACTACATGGAAGGT+CGG - chr8_4:53551683-53551702 Msa1333430:three_prime_UTR 45.0%
TCGGATGTGATGATCCAAGA+AGG - chr8_4:53551702-53551721 Msa1333430:exon 45.0%
CGGATGTGATGATCCAAGAA+GGG - chr8_4:53551703-53551722 Msa1333430:exon 45.0%
AATGCATGGATCACCCTTCT+TGG + chr8_4:53551719-53551738 None:intergenic 45.0%
CAGGGGCAACTTTATGCAAA+GGG - chr8_4:53552060-53552079 Msa1333430:CDS 45.0%
CAAAGGGCTGAATAGAGGAT+TGG - chr8_4:53552076-53552095 Msa1333430:CDS 45.0%
AAGGGCTGAATAGAGGATTG+GGG - chr8_4:53552078-53552097 Msa1333430:CDS 45.0%
GCACTATCTTGTAGCTAGTC+TGG - chr8_4:53552467-53552486 Msa1333430:intron 45.0%
! CTATCTTGTAGCTAGTCTGG+AGG - chr8_4:53552470-53552489 Msa1333430:intron 45.0%
GTTGTGTATGGCAGGATCTA+CGG - chr8_4:53552551-53552570 Msa1333430:intron 45.0%
GATCTACGGCCACTTATATG+AGG - chr8_4:53552565-53552584 Msa1333430:intron 45.0%
CAATGGCTATGGTGAAGAAG+CGG + chr8_4:53552707-53552726 None:intergenic 45.0%
AAGACAAATGGCACAGCCAA+TGG + chr8_4:53552724-53552743 None:intergenic 45.0%
! GCCTTCAAGTTTGAAAGCTG+TGG + chr8_4:53552799-53552818 None:intergenic 45.0%
GGCCTAGCCAAATCTATAGA+AGG - chr8_4:53552816-53552835 Msa1333430:intron 45.0%
! TGTAGGCATTGCATGCAAGT+TGG - chr8_4:53553304-53553323 Msa1333430:CDS 45.0%
! GTAGGCATTGCATGCAAGTT+GGG - chr8_4:53553305-53553324 Msa1333430:CDS 45.0%
TGACAGTACCTAGAATGCCT+TGG + chr8_4:53553333-53553352 None:intergenic 45.0%
TCGCCAATTTGGGTATACAG+TGG - chr8_4:53553395-53553414 Msa1333430:intron 45.0%
TATACAGTGGTAGCCCTACA+TGG - chr8_4:53553408-53553427 Msa1333430:intron 45.0%
GGTTCTCAAACAGCCATGTA+GGG + chr8_4:53553424-53553443 None:intergenic 45.0%
CACTTTACGCGGGAGTTATT+TGG + chr8_4:53553747-53553766 None:intergenic 45.0%
CAAATAACTCCCGCGTAAAG+TGG - chr8_4:53553745-53553764 Msa1333430:intron 45.0%
AATAACTCCCGCGTAAAGTG+GGG - chr8_4:53553747-53553766 Msa1333430:intron 45.0%
AACAGGACTCGAACAGATTG+TGG + chr8_4:53553943-53553962 None:intergenic 45.0%
! GAGATTTTATGGCTGCGTTG+AGG + chr8_4:53554095-53554114 None:intergenic 45.0%
TCTCAACCACGACTCTTCTT+AGG - chr8_4:53554111-53554130 Msa1333430:CDS 45.0%
TTCTTTGCTTGTGGAAACGG+TGG - chr8_4:53554377-53554396 Msa1333430:intron 45.0%
ACGAAGTTGAAGAACTTGGG+AGG - chr8_4:53554421-53554440 Msa1333430:CDS 45.0%
AGTTGAAGAACTTGGGAGGT+TGG - chr8_4:53554425-53554444 Msa1333430:CDS 45.0%
AGTGATTCTGAATGGGAGCA+GGG - chr8_4:53554547-53554566 Msa1333430:CDS 45.0%
!!! TTTAATTTGTAATTTTTTTA+TGG - chr8_4:53552037-53552056 Msa1333430:CDS 5.0%
!!! GTGGTTTTCGAGTTCACTGC+AGG - chr8_4:53551842-53551861 Msa1333430:CDS 50.0%
ATCCACAATTGCTGCCGTAC+CGG + chr8_4:53551951-53551970 None:intergenic 50.0%
GCAGGGGCAACTTTATGCAA+AGG - chr8_4:53552059-53552078 Msa1333430:CDS 50.0%
GGATTGGGGACACTATTAGC+AGG - chr8_4:53552092-53552111 Msa1333430:CDS 50.0%
CGCTTCTTCACCATAGCCAT+TGG - chr8_4:53552705-53552724 Msa1333430:intron 50.0%
AATGGCACAGCCAATGGCTA+TGG + chr8_4:53552718-53552737 None:intergenic 50.0%
AGGTCTTCCCCTGACCAATT+TGG + chr8_4:53552768-53552787 None:intergenic 50.0%
CGGTTCTCAAACAGCCATGT+AGG + chr8_4:53553425-53553444 None:intergenic 50.0%
CCAAAAGCAAATTCACGGGG+TGG + chr8_4:53553625-53553644 None:intergenic 50.0%
!! CCACCCCGTGAATTTGCTTT+TGG - chr8_4:53553622-53553641 Msa1333430:CDS 50.0%
TCTTTGAGTGGCTCGATGAC+AGG + chr8_4:53553705-53553724 None:intergenic 50.0%
ATAACTCCCGCGTAAAGTGG+GGG - chr8_4:53553748-53553767 Msa1333430:intron 50.0%
!! CTGCTGCTAGCCTTATGCAA+GGG + chr8_4:53553972-53553991 None:intergenic 50.0%
!! TCTGCTGCTAGCCTTATGCA+AGG + chr8_4:53553973-53553992 None:intergenic 50.0%
TTGCATAAGGCTAGCAGCAG+AGG - chr8_4:53553972-53553991 Msa1333430:intron 50.0%
TTGGAGCCTAAGAAGAGTCG+TGG + chr8_4:53554120-53554139 None:intergenic 50.0%
! TGGCGAGCATGTTGTTTGCT+TGG + chr8_4:53554149-53554168 None:intergenic 50.0%
TGAGCTCTTTCCATGAGAGG+CGG + chr8_4:53554178-53554197 None:intergenic 50.0%
GAGTGAGCTCTTTCCATGAG+AGG + chr8_4:53554181-53554200 None:intergenic 50.0%
TGTGGAAACGGTGGCAAAAC+TGG - chr8_4:53554386-53554405 Msa1333430:intron 50.0%
GAGTGATTCTGAATGGGAGC+AGG - chr8_4:53554546-53554565 Msa1333430:CDS 50.0%
! TGCATGCAAGTTGGGAGCCA+AGG - chr8_4:53553313-53553332 Msa1333430:CDS 55.0%
! GTTGGGAGCCAAGGCATTCT+AGG - chr8_4:53553322-53553341 Msa1333430:CDS 55.0%
AAGGTTGCCCCCACTTTACG+CGG + chr8_4:53553758-53553777 None:intergenic 55.0%
!! GCGCCGACTTCTTATGCTGT+TGG + chr8_4:53554022-53554041 None:intergenic 55.0%
CTTTCCATGAGAGGCGGCTA+TGG + chr8_4:53554172-53554191 None:intergenic 55.0%
GGCTGTCATGACTGTCGTCG+TGG - chr8_4:53551823-53551842 Msa1333430:CDS 60.0%
GACCGGTACGGCAGCAATTG+TGG - chr8_4:53551946-53551965 Msa1333430:CDS 60.0%
AGGTTGCCCCCACTTTACGC+GGG + chr8_4:53553757-53553776 None:intergenic 60.0%
TCCATGAGAGGCGGCTATGG+TGG + chr8_4:53554169-53554188 None:intergenic 60.0%
GCCACCATAGCCGCCTCTCA+TGG - chr8_4:53554165-53554184 Msa1333430:CDS 65.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 53551584 53554685 53551584 ID=Msa1333430;Name=Msa1333430
chr8_4 mRNA 53551584 53554685 53551584 ID=Msa1333430-mRNA-1;Parent=Msa1333430;Name=Msa1333430-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|1|0.66|1|1|1|6|134|524
chr8_4 exon 53551584 53552332 53551584 ID=Msa1333430-mRNA-1:exon:16462;Parent=Msa1333430-mRNA-1
chr8_4 exon 53552817 53552960 53552817 ID=Msa1333430-mRNA-1:exon:16461;Parent=Msa1333430-mRNA-1
chr8_4 exon 53553222 53553343 53553222 ID=Msa1333430-mRNA-1:exon:16460;Parent=Msa1333430-mRNA-1
chr8_4 exon 53553432 53553704 53553432 ID=Msa1333430-mRNA-1:exon:16459;Parent=Msa1333430-mRNA-1
chr8_4 exon 53554066 53554206 53554066 ID=Msa1333430-mRNA-1:exon:16458;Parent=Msa1333430-mRNA-1
chr8_4 exon 53554406 53554685 53554406 ID=Msa1333430-mRNA-1:exon:16457;Parent=Msa1333430-mRNA-1
chr8_4 CDS 53554406 53554685 53554406 ID=Msa1333430-mRNA-1:cds;Parent=Msa1333430-mRNA-1
chr8_4 CDS 53554066 53554206 53554066 ID=Msa1333430-mRNA-1:cds;Parent=Msa1333430-mRNA-1
chr8_4 CDS 53553432 53553704 53553432 ID=Msa1333430-mRNA-1:cds;Parent=Msa1333430-mRNA-1
chr8_4 CDS 53553222 53553343 53553222 ID=Msa1333430-mRNA-1:cds;Parent=Msa1333430-mRNA-1
chr8_4 CDS 53552817 53552960 53552817 ID=Msa1333430-mRNA-1:cds;Parent=Msa1333430-mRNA-1
chr8_4 CDS 53551718 53552332 53551718 ID=Msa1333430-mRNA-1:cds;Parent=Msa1333430-mRNA-1
chr8_4 three_prime_UTR 53551584 53551717 53551584 ID=Msa1333430-mRNA-1:three_prime_utr;Parent=Msa1333430-mRNA-1
Gene Sequence

>Msa1333430

ATGGCTATGGCTAGGAATAAGAGTGGCGAAAACCTTGAGAAATGGAAGAAACGTATCCATGTTTTTGGTGAGAGGCTTAAAAGGATTCCTTGTTTGGTTTGGAAGACTACATGGAAGGTCGGATGTGATGATCCAAGAAGGGTGATCCATGCATTCAAAGTTGGTTTATCTCTTACTCTTGTATCATTGCTTTATATATTGGAGCCACTCTTTAAAGGTATTGGCCAAAATGCTATTTGGGCTGTCATGACTGTCGTCGTGGTTTTCGAGTTCACTGCAGGGGCAACTTTATGCAAAGGGCTGAATAGAGGATTGGGGACACTATTAGCAGGATTATTGGCATTTCTTCTTGATTATGTTGCAAATGCTTCTGGTCAGATACTTCAAGCTGTTTTCATTGCAGTTGCAGTTTTTGTAATAGGATCTACGGCCACTTATATGAGGTTTGTTCCTTATATAAAGAAGAATTATGATTATGGTGTGGTTATATTCCTCTTAACCTTCAACTTGTTAACTGTTTCAAGTTACCGGGTTGATCATGTCTTGAAGATGGCACATGACCGCTTCTTCACCATAGCCATTGGCTGTGCCATTTGTCTTTTCATGAGTCTTTTAGTATTTCCAAATTGGTCAGGGGAAGACCTTCATCATTCCACAGCTTTCAAACTTGAAGGCCTAGCCAAATCTATAGAAGCTTGTGTCAATGAATATTTTTATGGAAAAATTGAAGTTTCTGGTGATATAAAATCATCTGAAGGTCCAATATACAAAGGTTATAAGGCTGTTTTGGATTCAAAATCCACAGATGAAACATTGGCATTGCATGCAAGTTGGGAGCCAAGGCATTCTAGGTACTGTCACAAATTTCCATCGCAACAGTATGTAAAAGTTGGAAATGTTCTTCGCCAATTTGGGTATACAGTGGTAGCCCTACATGGCTGTTTGAGAACCGAAATTCAGACACCACAATCTGTTCGAGTCCTGTTTAAGGACCCTTGCATAAGGCTAGCAGCAGAGGTATCAAAAGCACTAATAGAACTAGCCAACAGCATAAGAAGTCGGCGCCATTGCTCACCAGAAATACTCTCTGATCATCTACATGATGCATTGAAAGACCTCAACGCAGCCATAAAATCTCAACCACGACTCTTCTTAGGCTCCAATGACATCCAAGCAAACAACATGCTCGCCACCATAGCCGCCTCTCATGGAAAGAGCTCACTCTCAAGCGTTAAAACCGATTCTTCAGCTTTGTTAAATTGGAAAACCAAAAGTGTATCAGCTGAACAGACAAAGGAAGAAGAACAATTACCGGTACGTAAGGTGTTGAGAAAGCAGATGAGTAAAATTGCTATCACTAGTCTTGAGTTTTCTGAAGCATTGCCTTTTGCTGCTTTTGCTTCTTTGCTTGTGGAAACGGTGGCAAAACTGGATTTGATAATTGACGAAGTTGAAGAACTTGGGAGGTTGGCGTGTTTCAAAGAGTATACACCTGGTGATGAGTTTTCTATTAGTTCTGAGAAACCAAGAGTTGATGTTTTGGAGAACCATTTACCTTCTCATGGAGTAGAGTGA

Protein sequence

>Msa1333430

MAMARNKSGENLEKWKKRIHVFGERLKRIPCLVWKTTWKVGCDDPRRVIHAFKVGLSLTLVSLLYILEPLFKGIGQNAIWAVMTVVVVFEFTAGATLCKGLNRGLGTLLAGLLAFLLDYVANASGQILQAVFIAVAVFVIGSTATYMRFVPYIKKNYDYGVVIFLLTFNLLTVSSYRVDHVLKMAHDRFFTIAIGCAICLFMSLLVFPNWSGEDLHHSTAFKLEGLAKSIEACVNEYFYGKIEVSGDIKSSEGPIYKGYKAVLDSKSTDETLALHASWEPRHSRYCHKFPSQQYVKVGNVLRQFGYTVVALHGCLRTEIQTPQSVRVLFKDPCIRLAAEVSKALIELANSIRSRRHCSPEILSDHLHDALKDLNAAIKSQPRLFLGSNDIQANNMLATIAASHGKSSLSSVKTDSSALLNWKTKSVSAEQTKEEEQLPVRKVLRKQMSKIAITSLEFSEALPFAAFASLLVETVAKLDLIIDEVEELGRLACFKEYTPGDEFSISSEKPRVDVLENHLPSHGVE*