AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0074760

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0074760 MtrunA17_Chr1g0182791 93.053 547 24 3 1 546 1 534 0.0 1008
Msa0074760 MtrunA17_Chr7g0262691 64.955 331 77 14 217 534 151 455 1.51e-112 342
Msa0074760 MtrunA17_Chr7g0262691 45.455 121 46 6 2 122 3 103 3.06e-17 84.3
Msa0074760 MtrunA17_Chr3g0095391 30.450 555 260 20 1 520 1 464 2.29e-51 182
Msa0074760 MtrunA17_Chr1g0193321 60.403 149 55 2 267 411 398 546 1.17e-42 162
Msa0074760 MtrunA17_Chr7g0271251 50.867 173 73 3 272 432 373 545 2.43e-35 140
Msa0074760 MtrunA17_Chr1g0153241 67.949 78 23 1 329 404 85 162 1.66e-26 108
Msa0074760 MtrunA17_Chr7g0270871 56.000 100 40 1 299 394 168 267 8.10e-25 106
Msa0074760 MtrunA17_Chr5g0402031 74.627 67 15 1 338 402 114 180 4.20e-24 103
Msa0074760 MtrunA17_Chr7g0231461 63.291 79 26 1 313 391 284 359 1.43e-22 100
Msa0074760 MtrunA17_Chr4g0074161 53.165 79 33 1 324 398 201 279 2.45e-18 87.4
Msa0074760 MtrunA17_Chr1g0190731 57.143 63 27 0 331 393 195 257 3.07e-17 83.6
Msa0074760 MtrunA17_Chr3g0144641 36.923 130 72 5 331 452 193 320 6.31e-16 80.1
Msa0074760 MtrunA17_Chr1g0152131 40.000 115 55 5 331 437 262 370 1.16e-15 79.3
Msa0074760 MtrunA17_Chr8g0363921 46.341 82 42 2 331 410 153 234 5.80e-15 75.5
Msa0074760 MtrunA17_Chr7g0234761 50.725 69 33 1 331 398 319 387 1.42e-14 76.3
Msa0074760 MtrunA17_Chr8g0339091 31.282 195 97 7 218 393 180 356 1.47e-14 76.3
Msa0074760 MtrunA17_Chr5g0415291 45.122 82 43 2 331 410 114 195 1.79e-14 73.2
Msa0074760 MtrunA17_Chr3g0131771 49.315 73 36 1 331 402 149 221 1.96e-14 74.7
Msa0074760 MtrunA17_Chr4g0035101 54.688 64 28 1 331 393 145 208 2.10e-14 74.7
Msa0074760 MtrunA17_Chr5g0421111 54.688 64 28 1 331 393 367 430 4.42e-14 75.1
Msa0074760 MtrunA17_Chr8g0365941 54.688 64 28 1 331 393 307 370 4.59e-14 74.7
Msa0074760 MtrunA17_Chr6g0484271 45.570 79 42 1 316 393 142 220 5.30e-14 72.4
Msa0074760 MtrunA17_Chr5g0393721 29.348 184 100 6 258 440 170 324 8.16e-14 72.8
Msa0074760 MtrunA17_Chr8g0385911 45.946 74 38 2 331 402 147 220 8.39e-14 72.8
Msa0074760 MtrunA17_Chr1g0174161 39.773 88 51 2 331 416 162 249 9.44e-14 72.4
Msa0074760 MtrunA17_Chr3g0134741 33.636 110 58 2 327 436 227 321 2.83e-13 70.9
Msa0074760 MtrunA17_Chr1g0207311 34.286 105 55 2 323 422 185 280 3.69e-13 70.1
Msa0074760 MtrunA17_Chr7g0258161 35.897 117 63 4 331 444 175 282 4.54e-12 67.4
Msa0074760 MtrunA17_Chr1g0152651 45.455 66 36 0 327 392 272 337 5.88e-12 67.4
Msa0074760 MtrunA17_Chr1g0207301 32.323 99 58 1 326 424 285 374 2.45e-11 65.5
Msa0074760 MtrunA17_Chr1g0184841 48.611 72 33 1 331 398 122 193 8.50e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0074760 AT2G20180.4 40.257 544 203 25 1 520 1 446 1.29e-77 253
Msa0074760 AT2G20180.6 40.257 544 203 25 1 520 1 446 1.29e-77 253
Msa0074760 AT2G20180.2 40.257 544 203 25 1 520 1 446 1.29e-77 253
Msa0074760 AT2G20180.3 40.257 544 203 25 1 520 1 446 1.29e-77 253
Msa0074760 AT2G20180.7 41.150 452 163 19 86 520 10 375 2.74e-66 221
Msa0074760 AT2G20180.1 41.150 452 163 19 86 520 10 375 2.74e-66 221
Msa0074760 AT2G20180.5 41.150 452 163 19 86 520 10 375 2.74e-66 221
Msa0074760 AT2G20180.8 39.078 412 156 19 1 390 1 339 6.12e-56 191
Msa0074760 AT4G28800.1 32.394 497 224 17 29 515 17 411 1.01e-53 189
Msa0074760 AT4G28800.2 32.064 499 223 18 26 515 26 417 6.45e-50 178
Msa0074760 AT4G28790.1 33.879 428 197 14 23 436 16 371 1.21e-45 166
Msa0074760 AT4G28811.1 33.525 522 241 19 31 537 108 538 1.21e-40 155
Msa0074760 AT1G09530.3 33.255 427 205 15 32 413 27 418 9.41e-39 149
Msa0074760 AT1G09530.2 33.255 427 205 15 32 413 27 418 9.41e-39 149
Msa0074760 AT1G09530.5 33.255 427 205 15 32 413 27 418 9.41e-39 149
Msa0074760 AT1G09530.1 33.255 427 205 15 32 413 27 418 9.41e-39 149
Msa0074760 AT1G09530.4 33.255 427 205 15 32 413 27 418 9.41e-39 149
Msa0074760 AT1G09530.6 33.255 427 205 15 32 413 27 418 9.41e-39 149
Msa0074760 AT4G28790.2 32.181 376 186 10 23 389 16 331 4.07e-35 135
Msa0074760 AT4G28815.2 41.327 196 63 8 326 521 65 208 2.35e-31 121
Msa0074760 AT4G28815.1 41.327 196 63 8 326 521 141 284 1.32e-30 122
Msa0074760 AT2G46970.2 53.077 130 54 4 295 419 155 282 1.69e-30 123
Msa0074760 AT2G46970.3 53.077 130 54 4 295 419 164 291 2.32e-30 123
Msa0074760 AT2G46970.1 51.471 136 53 3 295 425 186 313 2.57e-30 123
Msa0074760 AT3G59060.1 52.482 141 52 4 295 420 211 351 1.34e-28 119
Msa0074760 AT3G59060.3 52.482 141 52 4 295 420 211 351 1.55e-28 118
Msa0074760 AT3G59060.2 52.482 141 52 4 295 420 211 351 1.55e-28 118
Msa0074760 AT3G59060.4 52.482 141 52 4 295 420 211 351 1.55e-28 118
Msa0074760 AT5G67110.1 55.446 101 41 2 307 405 67 165 8.35e-26 105
Msa0074760 AT4G36930.1 73.611 72 17 1 335 404 197 268 1.15e-25 109
Msa0074760 AT2G43010.4 65.263 95 25 2 323 409 245 339 1.37e-24 106
Msa0074760 AT2G43010.2 56.557 122 40 3 296 409 223 339 1.62e-24 106
Msa0074760 AT2G43010.1 56.557 122 40 3 296 409 223 339 1.80e-24 106
Msa0074760 AT2G43010.3 56.557 122 40 3 296 409 230 346 2.20e-24 106
Msa0074760 AT2G43010.5 56.557 122 40 3 296 409 265 381 3.71e-24 106
Msa0074760 AT4G00050.2 65.753 73 25 0 320 392 96 168 2.74e-23 100
Msa0074760 AT4G00050.3 65.753 73 25 0 320 392 198 270 6.24e-23 101
Msa0074760 AT4G00050.1 65.753 73 25 0 320 392 198 270 7.34e-23 101
Msa0074760 AT2G24260.2 58.571 70 29 0 324 393 30 99 7.52e-20 89.7
Msa0074760 AT5G50915.3 35.329 167 92 4 298 450 97 261 8.99e-20 89.7
Msa0074760 AT5G50915.4 35.329 167 92 4 298 450 97 261 8.99e-20 89.7
Msa0074760 AT5G50915.1 35.329 167 92 4 298 450 97 261 1.36e-19 89.7
Msa0074760 AT5G50915.2 35.329 167 92 4 298 450 97 261 1.36e-19 89.7
Msa0074760 AT2G24260.1 58.571 70 29 0 324 393 133 202 2.77e-19 90.1
Msa0074760 AT3G62090.1 48.454 97 45 2 331 425 167 260 8.67e-19 88.6
Msa0074760 AT3G62090.2 48.454 97 45 2 331 425 184 277 1.42e-18 88.2
Msa0074760 AT4G30980.1 60.317 63 25 0 331 393 132 194 1.85e-18 86.7
Msa0074760 AT5G58010.1 60.317 63 25 0 331 393 101 163 2.08e-18 86.3
Msa0074760 AT4G30980.2 60.317 63 25 0 331 393 180 242 5.03e-18 86.3
Msa0074760 AT1G02340.1 39.130 138 71 7 343 475 141 270 9.22e-17 81.6
Msa0074760 AT1G02340.2 39.130 138 71 7 343 475 134 263 1.02e-16 81.3
Msa0074760 AT1G59640.1 31.016 187 110 5 231 410 45 219 1.41e-16 80.5
Msa0074760 AT5G61270.2 40.323 124 65 2 283 405 34 149 5.80e-16 79.0
Msa0074760 AT5G61270.3 40.323 124 65 2 283 405 34 149 5.80e-16 79.0
Msa0074760 AT5G61270.1 40.323 124 65 2 283 405 122 237 1.73e-15 78.6
Msa0074760 AT1G59640.2 45.455 99 46 3 320 410 121 219 8.71e-15 76.3
Msa0074760 AT4G36540.1 50.725 69 33 1 331 398 143 211 1.20e-14 75.5
Msa0074760 AT4G36540.2 50.725 69 33 1 331 398 143 211 1.27e-14 75.1
Msa0074760 AT1G26260.4 38.017 121 72 2 276 393 168 288 1.27e-14 76.3
Msa0074760 AT1G26260.1 38.017 121 72 2 276 393 168 288 1.27e-14 76.3
Msa0074760 AT1G26260.6 38.017 121 72 2 276 393 168 288 1.27e-14 76.3
Msa0074760 AT1G26260.2 38.017 121 72 2 276 393 168 288 1.27e-14 76.3
Msa0074760 AT4G34530.1 41.053 95 54 2 305 398 149 242 1.53e-14 75.5
Msa0074760 AT1G26260.3 36.508 126 77 2 276 398 117 242 1.61e-14 75.5
Msa0074760 AT1G26260.5 38.017 121 72 2 276 393 146 266 1.64e-14 75.9
Msa0074760 AT1G10120.2 50.725 69 33 1 331 398 208 276 1.97e-14 75.5
Msa0074760 AT1G10120.1 50.725 69 33 1 331 398 208 276 1.97e-14 75.5
Msa0074760 AT1G68920.3 50.725 69 33 1 331 398 304 372 2.17e-14 76.3
Msa0074760 AT1G68920.1 50.725 69 33 1 331 398 305 373 2.31e-14 76.3
Msa0074760 AT1G68920.4 50.725 69 33 1 331 398 305 373 2.31e-14 76.3
Msa0074760 AT1G68920.2 50.725 69 33 1 331 398 305 373 2.31e-14 76.3
Msa0074760 AT3G07340.2 50.725 69 33 1 331 398 260 328 2.56e-14 75.9
Msa0074760 AT3G07340.1 50.725 69 33 1 331 398 260 328 2.84e-14 75.5
Msa0074760 AT5G62610.2 50.725 69 33 1 331 398 155 223 2.90e-14 73.9
Msa0074760 AT5G62610.1 50.725 69 33 1 331 398 155 223 2.90e-14 73.9
Msa0074760 AT5G48560.2 54.688 64 28 1 331 393 303 366 3.07e-14 75.5
Msa0074760 AT5G48560.1 54.688 64 28 1 331 393 303 366 3.57e-14 75.5
Msa0074760 AT2G18300.2 47.826 69 35 1 331 398 187 255 8.09e-14 73.2
Msa0074760 AT2G18300.1 47.826 69 35 1 331 398 187 255 8.10e-14 73.2
Msa0074760 AT3G23690.1 47.826 69 35 1 331 398 193 261 9.10e-14 73.6
Msa0074760 AT2G18300.3 47.826 69 35 1 331 398 187 255 1.34e-13 72.8
Msa0074760 AT2G14760.1 36.735 98 53 1 327 424 235 323 1.45e-13 72.4
Msa0074760 AT1G25330.1 50.000 64 31 1 331 393 106 169 2.29e-13 70.1
Msa0074760 AT1G73830.2 48.438 64 32 1 331 393 149 212 4.50e-13 70.1
Msa0074760 AT1G73830.1 48.438 64 32 1 331 393 149 212 4.96e-13 69.7
Msa0074760 AT1G18400.2 48.438 64 32 1 331 393 147 210 6.56e-13 69.3
Msa0074760 AT4G33880.1 38.298 94 49 1 327 420 264 348 7.04e-13 70.5
Msa0074760 AT1G18400.1 48.438 64 32 1 331 393 147 210 8.02e-13 69.3
Msa0074760 AT3G57800.2 51.562 64 30 1 331 393 206 269 9.35e-13 70.5
Msa0074760 AT2G42300.4 46.377 69 36 1 331 398 187 255 1.01e-12 69.3
Msa0074760 AT4G28790.6 27.410 332 172 10 23 345 16 287 1.17e-12 69.3
Msa0074760 AT4G28790.3 27.410 332 172 10 23 345 16 287 1.17e-12 69.3
Msa0074760 AT4G28790.4 27.410 332 172 10 23 345 16 287 1.17e-12 69.3
Msa0074760 AT2G42300.1 46.377 69 36 1 331 398 187 255 1.37e-12 69.3
Msa0074760 AT1G27740.1 44.776 67 37 0 326 392 164 230 1.51e-12 68.2
Msa0074760 AT1G68240.1 41.111 90 52 1 315 403 47 136 4.29e-12 65.5
Msa0074760 AT5G43175.1 36.667 90 48 1 331 420 134 214 4.60e-12 66.2
Msa0074760 AT1G68240.2 41.111 90 52 1 315 403 47 136 7.27e-12 64.7
Msa0074760 AT2G14760.3 34.021 97 55 1 328 424 249 336 1.12e-11 66.6

Find 173 sgRNAs with CRISPR-Local

Find 936 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTAAATTGGCGGTGGTTT+TGG 0.202001 1_2:+49679340 None:intergenic
ATGGGGATGGGAATGGGTTT+AGG 0.204090 1_2:-49673685 Msa0074760:CDS
CATTCATTCATTTCATTATT+CGG 0.237267 1_2:-49679960 None:intergenic
GCAACTGTAGCTGGTCCTTT+TGG 0.266955 1_2:-49673583 Msa0074760:CDS
CGGCAGGGGTGGCGGCTTCT+CGG 0.320550 1_2:-49679008 Msa0074760:CDS
GGAGAATTAGGCAACATATT+AGG 0.325301 1_2:+49673619 None:intergenic
GCAGAGCACCAAGGGAGTTA+AGG 0.325749 1_2:+49673464 None:intergenic
GGTTTCTTTGAATGATGTAT+AGG 0.327763 1_2:+49679519 None:intergenic
GCTGCTGGCAAAGGAGAATT+AGG 0.328372 1_2:+49673607 None:intergenic
TGGGGATGGGAATGGGTTTA+GGG 0.339637 1_2:-49673684 Msa0074760:CDS
CTCTGAAACTCAGATTCTTC+CGG 0.349431 1_2:+49678574 None:intergenic
ATGGTTGATTTGATTTAGAT+TGG 0.353287 1_2:+49679845 None:intergenic
GTTTCTTTGAATGATGTATA+GGG 0.365818 1_2:+49679520 None:intergenic
ATCCAACATTGAAGCTTTGT+CGG 0.371400 1_2:+49675565 None:intergenic
GTACGCTGCTTCGAGATTAT+CGG 0.371790 1_2:-49678767 Msa0074760:CDS
CTGCAGGAACATGGGGCATA+TGG 0.374715 1_2:+49673536 None:intergenic
GCTTGCATTCTGGATGAATC+AGG 0.377153 1_2:+49673508 None:intergenic
TGGTAAGGATCTGTGAAGTT+TGG 0.382377 1_2:+49673415 None:intergenic
TCGAGATTAATAGACAAGTA+TGG 0.385029 1_2:+49679826 None:intergenic
GGTAAGGATCTGTGAAGTTT+GGG 0.385109 1_2:+49673416 None:intergenic
TCCATTTGAATATCGAAATC+TGG 0.386523 1_2:+49679558 None:intergenic
TTTGGAATGCGTGATTGATT+TGG 0.386827 1_2:+49673439 None:intergenic
CAGAGCACCAAGGGAGTTAA+GGG 0.397688 1_2:+49673465 None:intergenic
TTTATGCCGGCGATGGGAAT+GGG 0.402200 1_2:-49673703 Msa0074760:CDS
GGATCTGTGAAGTTTGGGTT+TGG 0.408214 1_2:+49673421 None:intergenic
ATGGGAATGGGGATGGGAAT+GGG 0.415003 1_2:-49673691 Msa0074760:CDS
AACGAGACCGGCAGGGGTGG+CGG 0.415465 1_2:-49679016 Msa0074760:CDS
GGCATAAATTGCTGAATTCC+AGG 0.416047 1_2:+49673718 None:intergenic
TTCTAGCGGGAGTGCTGAAC+CGG 0.418643 1_2:-49678641 Msa0074760:CDS
CTGGCGGTGGTTGTAGTTGC+CGG 0.419365 1_2:+49679306 None:intergenic
AGGAGCGCGACGGCGGAGAC+TGG 0.419387 1_2:-49678736 Msa0074760:CDS
CGAGATTATCGGAAACGATC+AGG 0.421871 1_2:-49678756 Msa0074760:CDS
GAAAAGGAAGGGACGTGAAC+CGG 0.422354 1_2:-49678593 Msa0074760:CDS
ATGGGTTTAGGGATGGAAAT+CGG 0.430729 1_2:-49673673 Msa0074760:CDS
GATTCATCCGGCGAGGAAAC+CGG 0.433202 1_2:-49678980 Msa0074760:CDS
CATTCATCAGTCGGAAGCGC+CGG 0.433679 1_2:-49679114 Msa0074760:CDS
TGGATTATCTTGGCTCCCAC+TGG 0.435044 1_2:+49672307 None:intergenic
TTAGGCAACATATTAGGAAA+TGG 0.443474 1_2:+49673625 None:intergenic
GTTCATACAAGAAGATGAAA+TGG 0.443914 1_2:-49679217 Msa0074760:CDS
GGTGGGGACCGAGGTATTGC+TGG 0.446521 1_2:+49673395 None:intergenic
GGTTTCCTCGCCGGATGAAT+CGG 0.451246 1_2:+49678982 None:intergenic
GATGGGAATGGGGATGGGAA+TGG 0.451351 1_2:-49673692 Msa0074760:CDS
TCTTGGCTCCCACTGGTACC+TGG 0.452130 1_2:+49672314 None:intergenic
AACGTGAGTCGGAGTTTGTT+CGG 0.452453 1_2:-49679041 Msa0074760:CDS
TCCAGATTTCGATATTCAAA+TGG 0.453129 1_2:-49679559 Msa0074760:CDS
TAGAACACAGAAACCGGATA+TGG 0.455584 1_2:-49678944 Msa0074760:CDS
CGAGAAGCCGCCACCCCTGC+CGG 0.456524 1_2:+49679009 None:intergenic
CAGAATGATAATTACGTGAA+AGG 0.456561 1_2:+49679498 None:intergenic
GTCATTGCAGTTACAAGTGC+AGG 0.457289 1_2:-49675522 Msa0074760:intron
CAGGTGCAGCTGCAGGAACA+TGG 0.457934 1_2:+49673527 None:intergenic
CAGAAACACGGCGGAGGTAG+TGG 0.461846 1_2:-49679090 Msa0074760:CDS
CGTCGCCTGGTTGTTCTAGC+GGG 0.462418 1_2:-49678654 Msa0074760:CDS
ATTTATGCCGGCGATGGGAA+TGG 0.464029 1_2:-49673704 Msa0074760:CDS
GGTGAATAGAACACAGAAAC+CGG 0.465326 1_2:-49678950 Msa0074760:CDS
ATGATACCTATGATGTTTCC+TGG 0.467201 1_2:-49673736 Msa0074760:CDS
GTTCTATTCACCACCATATC+CGG 0.470011 1_2:+49678931 None:intergenic
CCAGCAGCAGCAACTGTAGC+TGG 0.470668 1_2:-49673592 Msa0074760:CDS
CCAGCTACAGTTGCTGCTGC+TGG 0.475321 1_2:+49673592 None:intergenic
TTAGGGATGGAAATCGGAAT+GGG 0.475696 1_2:-49673667 Msa0074760:CDS
GTTCGGCAAACGAGACCGGC+AGG 0.475712 1_2:-49679024 Msa0074760:CDS
GTTCACTTCTCGCATTACTT+TGG 0.477874 1_2:+49678878 None:intergenic
CTTTATGCAGATGATGTCCA+TGG 0.478571 1_2:-49673767 Msa0074760:intron
GATCGAATCTCTCTATGATC+AGG 0.479842 1_2:+49679273 None:intergenic
CATTAATTGCTGCACCTGGT+GGG 0.482274 1_2:+49673378 None:intergenic
TCAGCAATTTATGCCGGCGA+TGG 0.482673 1_2:-49673710 Msa0074760:CDS
CCTGCATTAATTGCTGCACC+TGG 0.485944 1_2:+49673374 None:intergenic
AATCCAGAAAAGCATTAGTC+AGG 0.486715 1_2:-49672290 Msa0074760:exon
AACCGGAGTTGGACCGGAAA+AGG 0.489470 1_2:-49678609 Msa0074760:CDS
ATATTAGGAAATGGCATCAC+TGG 0.491333 1_2:+49673634 None:intergenic
TGAATTCCAGGAAACATCAT+AGG 0.491738 1_2:+49673730 None:intergenic
GCCGGCGATGGGAATGGGGA+TGG 0.493972 1_2:-49673698 Msa0074760:CDS
CCCATCCCCATTCCCATCGC+CGG 0.494774 1_2:+49673697 None:intergenic
ATGACAGTTACGTCGTCGCC+TGG 0.498022 1_2:-49678667 Msa0074760:CDS
CCGGCGATGGGAATGGGGAT+GGG 0.499606 1_2:-49673697 Msa0074760:CDS
AACTCCGGTTCTCTATGAAC+CGG 0.499849 1_2:+49678622 None:intergenic
GTTTGTTCGGCAAACGAGAC+CGG 0.503070 1_2:-49679028 Msa0074760:CDS
ACAGTTGCTGCTGCTGGCAA+AGG 0.505523 1_2:+49673598 None:intergenic
GATGAATCAGGTGCAGCTGC+AGG 0.505773 1_2:+49673520 None:intergenic
GTTGTAGTTGCCGGTGCCGA+CGG 0.507949 1_2:+49679315 None:intergenic
ACCATCTCCGGTTTCCTCGC+CGG 0.508019 1_2:+49678973 None:intergenic
GTTCTATTCACCACCATCTC+CGG 0.514131 1_2:+49678961 None:intergenic
GGACCGAGGTATTGCTGGTA+AGG 0.515019 1_2:+49673400 None:intergenic
AGGAATCACGCGACTGGCGG+TGG 0.519980 1_2:+49679293 None:intergenic
TGGAATTCAGCAATTTATGC+CGG 0.522421 1_2:-49673716 Msa0074760:CDS
CTGAAATCGTGACGGTTGAA+AGG 0.522705 1_2:+49679153 None:intergenic
ATTTAGAAAACCGTCGGCAC+CGG 0.522972 1_2:-49679325 Msa0074760:CDS
ATAGCGAACCTTGGTCCAAA+AGG 0.525545 1_2:+49673568 None:intergenic
TAAACTAAGATTAATTTGTG+TGG 0.526418 1_2:+49679753 None:intergenic
GCAACAAGACGATGAGATCA+TGG 0.527589 1_2:-49679400 Msa0074760:CDS
TTCTCGGCCTCCGATTCATC+CGG 0.528261 1_2:-49678992 Msa0074760:CDS
AGGTGCAGCTGCAGGAACAT+GGG 0.528619 1_2:+49673528 None:intergenic
ATGGAACTATTGTGGCAAAA+CGG 0.535259 1_2:-49679381 Msa0074760:CDS
ATAGAGAACCGGAGTTGGAC+CGG 0.535858 1_2:-49678615 Msa0074760:CDS
GCAAACGAGACCGGCAGGGG+TGG 0.535871 1_2:-49679019 Msa0074760:CDS
GTCAACAGACCAGGTACCAG+TGG 0.537139 1_2:-49672323 Msa0074760:CDS
CAGCAATTTATGCCGGCGAT+GGG 0.537150 1_2:-49673709 Msa0074760:CDS
TGCGTGAGTGTGAGCACCAC+CGG 0.539985 1_2:-49678712 Msa0074760:CDS
GCAATACCTCGGTCCCCACC+AGG 0.546189 1_2:-49673392 Msa0074760:CDS
AACGATCAGGAGCGCGACGG+CGG 0.546234 1_2:-49678743 Msa0074760:CDS
ATTTGGAGGCAGAGCACCAA+GGG 0.548032 1_2:+49673456 None:intergenic
ATTCATGTAGTTATCTGCAT+CGG 0.548506 1_2:+49679248 None:intergenic
GGAATGCGTGATTGATTTGG+AGG 0.548745 1_2:+49673442 None:intergenic
ACCTCCGCCGTGTTTCTGAC+CGG 0.553023 1_2:+49679095 None:intergenic
GTCCGACAAAGCTTCAATGT+TGG 0.553364 1_2:-49675567 Msa0074760:CDS
ATTAATTGCTGCACCTGGTG+GGG 0.553799 1_2:+49673379 None:intergenic
TCGGCAAACGAGACCGGCAG+GGG 0.555007 1_2:-49679022 Msa0074760:CDS
GCATTAATTGCTGCACCTGG+TGG 0.556345 1_2:+49673377 None:intergenic
ATTATGAACCTCTGCAGCAC+GGG 0.558566 1_2:+49675832 None:intergenic
GATGGGAATGGGTTTAGGGA+TGG 0.562444 1_2:-49673680 Msa0074760:CDS
ATGATCAGGAATCACGCGAC+TGG 0.564484 1_2:+49679287 None:intergenic
GCCGGTCAGAAACACGGCGG+AGG 0.564625 1_2:-49679096 Msa0074760:CDS
TGAACCGGTTCATAGAGAAC+CGG 0.564686 1_2:-49678626 Msa0074760:CDS
AGGTATCATGCCACATCCCA+TGG 0.569792 1_2:+49673750 None:intergenic
GGAACATGGGGCATATGGAA+AGG 0.576243 1_2:+49673541 None:intergenic
ATTTAGATTGGAAGAGTGAG+TGG 0.576472 1_2:+49679857 None:intergenic
TTTAGGGATGGAAATCGGAA+TGG 0.578061 1_2:-49673668 Msa0074760:CDS
AAAGAGATCCCGTGCTGCAG+AGG 0.580112 1_2:-49675840 Msa0074760:CDS
AAACTCCGACTCACGTTCCG+TGG 0.580438 1_2:+49679047 None:intergenic
CGGAAAAGCGGCGACGACGT+TGG 0.580682 1_2:-49678692 Msa0074760:CDS
TTATGCCGGCGATGGGAATG+GGG 0.582904 1_2:-49673702 Msa0074760:CDS
TGTGAGCACCACCGGAAAAG+CGG 0.585267 1_2:-49678704 Msa0074760:CDS
CCAGGTGCAGCAATTAATGC+AGG 0.585533 1_2:-49673374 Msa0074760:intron
GGTTCATAGAGAACCGGAGT+TGG 0.586478 1_2:-49678620 Msa0074760:CDS
GGTGCAGCTGCAGGAACATG+GGG 0.593185 1_2:+49673529 None:intergenic
ATGAGATCATGGAACTATTG+TGG 0.596163 1_2:-49679389 Msa0074760:CDS
TTCGGCAAACGAGACCGGCA+GGG 0.598004 1_2:-49679023 Msa0074760:CDS
ACAAGCCACGGAACGTGAGT+CGG 0.600009 1_2:-49679052 Msa0074760:CDS
CAGATGATGTCCATGGGATG+TGG 0.601497 1_2:-49673760 Msa0074760:CDS
ATCGAACTCGAAGATGCACC+TGG 0.602615 1_2:+49678856 None:intergenic
GGCGAGGAAACCGGAGATGG+TGG 0.604411 1_2:-49678971 Msa0074760:CDS
TGCAGCGGCAAGAGAATCGA+CGG 0.605167 1_2:-49678830 Msa0074760:CDS
GCTGCACCTGGTGGGGACCG+AGG 0.609026 1_2:+49673386 None:intergenic
TCCGGCGAGGAAACCGGAGA+TGG 0.609760 1_2:-49678974 Msa0074760:CDS
TTTATGCAGATGATGTCCAT+GGG 0.610157 1_2:-49673766 Msa0074760:intron
GATTATGAACCTCTGCAGCA+CGG 0.610880 1_2:+49675831 None:intergenic
AGAGCACCAAGGGAGTTAAG+GGG 0.612372 1_2:+49673466 None:intergenic
GAATATCGAAATCTGGAACA+TGG 0.612681 1_2:+49679565 None:intergenic
TTCCTCGCCGGATGAATCGG+AGG 0.613809 1_2:+49678985 None:intergenic
TAGATTGGAAGAGTGAGTGG+TGG 0.614629 1_2:+49679860 None:intergenic
AGTAATGCGAGAAGTGAACC+AGG 0.615012 1_2:-49678874 Msa0074760:CDS
AAAGGAGGCATAGCGAACCT+TGG 0.615246 1_2:+49673559 None:intergenic
GGAGTTGGACCGGAAAAGGA+AGG 0.615583 1_2:-49678605 Msa0074760:CDS
AACACAGAAACCGGATATGG+TGG 0.616872 1_2:-49678941 Msa0074760:CDS
TGTTATACAAGCACAAGCCA+CGG 0.625309 1_2:-49679064 Msa0074760:CDS
GGTTCATAATCTCTCAGAGA+GGG 0.625587 1_2:-49675819 Msa0074760:intron
CAGCAAAATGTCAACAGACC+AGG 0.626812 1_2:-49672332 Msa0074760:CDS
ACTTATACCGCGGTGCAACA+AGG 0.628814 1_2:-49675675 Msa0074760:intron
TCGTCGCCTGGTTGTTCTAG+CGG 0.629552 1_2:-49678655 Msa0074760:CDS
GAGTTGGACCGGAAAAGGAA+GGG 0.631011 1_2:-49678604 Msa0074760:CDS
AAACACGGCGGAGGTAGTGG+CGG 0.631102 1_2:-49679087 Msa0074760:CDS
AGAATCTGAGTTTCAGAGCG+AGG 0.634691 1_2:-49678569 Msa0074760:intron
GGAAGCGCCGGTCAGAAACA+CGG 0.635704 1_2:-49679102 Msa0074760:CDS
GAGCACCAAGGGAGTTAAGG+GGG 0.635812 1_2:+49673467 None:intergenic
ATCAGGAATCACGCGACTGG+CGG 0.647878 1_2:+49679290 None:intergenic
AAATCGTGACGGTTGAAAGG+AGG 0.650313 1_2:+49679156 None:intergenic
CTTTGCAAGAACTTATACCG+CGG 0.653949 1_2:-49675685 Msa0074760:CDS
GGCCTCCGATTCATCCGGCG+AGG 0.655663 1_2:-49678987 Msa0074760:CDS
ACATGGGGCATATGGAAAGG+AGG 0.660166 1_2:+49673544 None:intergenic
GGAAACGATCAGGAGCGCGA+CGG 0.663906 1_2:-49678746 Msa0074760:CDS
TTCGAGTTCGATGATTGCAG+CGG 0.665279 1_2:-49678845 Msa0074760:CDS
GATCCTTACCAGCAATACCT+CGG 0.665739 1_2:-49673403 Msa0074760:CDS
GCACTCCCGCTAGAACAACC+AGG 0.673024 1_2:+49678649 None:intergenic
CCGCCAATTTAGAAAACCGT+CGG 0.675021 1_2:-49679331 Msa0074760:CDS
TCTTTGCAGATGTAGATCCA+CGG 0.678173 1_2:+49675858 None:intergenic
GGTAGATTCATGTGATACGC+CGG 0.678374 1_2:-49678806 Msa0074760:CDS
TCAACAGACCAGGTACCAGT+GGG 0.681572 1_2:-49672322 Msa0074760:CDS
TGTTTCACCTTGTTGCACCG+CGG 0.687099 1_2:+49675668 None:intergenic
GATTTGGAGGCAGAGCACCA+AGG 0.716717 1_2:+49673455 None:intergenic
AAGAAGATGAAATGGCATCG+TGG 0.717990 1_2:-49679209 Msa0074760:CDS
TTTCTGAACTGAAATCGTGA+CGG 0.732941 1_2:+49679145 None:intergenic
AGGTTCATAATCTCTCAGAG+AGG 0.750433 1_2:-49675820 Msa0074760:CDS
AGCGCCGGTCAGAAACACGG+CGG 0.772257 1_2:-49679099 Msa0074760:CDS
AGCGGCAAGAGAATCGACGG+TGG 0.788837 1_2:-49678827 Msa0074760:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAACAAACAAATAAAT+CGG + chr1_2:49673713-49673732 None:intergenic 10.0%
!!! TTTTTTAATATTTGTAAAAG+TGG + chr1_2:49674256-49674275 None:intergenic 10.0%
!!! TTATTTTTTATTATTGGAAT+CGG - chr1_2:49674348-49674367 Msa0074760:intron 10.0%
!! TGAATTAACATATATATATA+CGG + chr1_2:49674691-49674710 None:intergenic 10.0%
!! AGAAAAAAAATTATATGAAA+AGG - chr1_2:49675159-49675178 Msa0074760:intron 10.0%
!! TAAGAATATATATAATAAGT+TGG - chr1_2:49676197-49676216 Msa0074760:intron 10.0%
!!! TTTTTTTTCTTCTTATAATT+TGG - chr1_2:49677329-49677348 Msa0074760:intron 10.0%
!!! TTTTTTTCTTCTTATAATTT+GGG - chr1_2:49677330-49677349 Msa0074760:intron 10.0%
!! AAATAAACAAACAAATAAAT+CGG + chr1_2:49673713-49673732 None:intergenic 10.0%
!!! TTTTTTAATATTTGTAAAAG+TGG + chr1_2:49674256-49674275 None:intergenic 10.0%
!!! TTATTTTTTATTATTGGAAT+CGG - chr1_2:49674348-49674367 Msa0074760:intron 10.0%
!! TGAATTAACATATATATATA+CGG + chr1_2:49674691-49674710 None:intergenic 10.0%
!! AGAAAAAAAATTATATGAAA+AGG - chr1_2:49675159-49675178 Msa0074760:intron 10.0%
!! TAAGAATATATATAATAAGT+TGG - chr1_2:49676197-49676216 Msa0074760:intron 10.0%
!!! TTTTTTTTCTTCTTATAATT+TGG - chr1_2:49677329-49677348 Msa0074760:intron 10.0%
!!! TTTTTTTCTTCTTATAATTT+GGG - chr1_2:49677330-49677349 Msa0074760:intron 10.0%
!!! ATTAACTACATTTATTTTAG+GGG + chr1_2:49674290-49674309 None:intergenic 15.0%
!!! CATTAACTACATTTATTTTA+GGG + chr1_2:49674291-49674310 None:intergenic 15.0%
!!! ACATTAACTACATTTATTTT+AGG + chr1_2:49674292-49674311 None:intergenic 15.0%
!! TATAAGAAAAAACAGTTATT+TGG - chr1_2:49674563-49674582 Msa0074760:intron 15.0%
!! TCAATGTTAATTAACTTTAA+TGG - chr1_2:49674904-49674923 Msa0074760:intron 15.0%
!!! TCAACGTATATATTTTTTTT+TGG + chr1_2:49675415-49675434 None:intergenic 15.0%
!! ACATAGTTATATAAGATATT+TGG - chr1_2:49675849-49675868 Msa0074760:CDS 15.0%
!!! TATTTAGATTTTTGTATTTG+TGG - chr1_2:49676092-49676111 Msa0074760:intron 15.0%
!!! ATTTAGATTTTTGTATTTGT+GGG - chr1_2:49676093-49676112 Msa0074760:intron 15.0%
!!! GTTTTTTTTGCTTATATTAT+AGG + chr1_2:49676998-49677017 None:intergenic 15.0%
!!! TTTTTGCTTATATTATAAGA+CGG + chr1_2:49677028-49677047 None:intergenic 15.0%
!! AAAACTAAAACATAAGAATT+TGG + chr1_2:49677295-49677314 None:intergenic 15.0%
!! AAAGAATAAAAACATAATGT+GGG + chr1_2:49677683-49677702 None:intergenic 15.0%
!! TAAACAAAGTAAAATGTATT+TGG - chr1_2:49679030-49679049 Msa0074760:CDS 15.0%
!!! ATATCATTTTTGAGATTATA+TGG - chr1_2:49679114-49679133 Msa0074760:CDS 15.0%
!!! TATCATTTTTGAGATTATAT+GGG - chr1_2:49679115-49679134 Msa0074760:CDS 15.0%
!!! ATTAACTACATTTATTTTAG+GGG + chr1_2:49674290-49674309 None:intergenic 15.0%
!!! CATTAACTACATTTATTTTA+GGG + chr1_2:49674291-49674310 None:intergenic 15.0%
!!! ACATTAACTACATTTATTTT+AGG + chr1_2:49674292-49674311 None:intergenic 15.0%
!! TATAAGAAAAAACAGTTATT+TGG - chr1_2:49674563-49674582 Msa0074760:intron 15.0%
!! TCAATGTTAATTAACTTTAA+TGG - chr1_2:49674904-49674923 Msa0074760:intron 15.0%
!!! TCAACGTATATATTTTTTTT+TGG + chr1_2:49675415-49675434 None:intergenic 15.0%
!! ACATAGTTATATAAGATATT+TGG - chr1_2:49675849-49675868 Msa0074760:CDS 15.0%
!!! TATTTAGATTTTTGTATTTG+TGG - chr1_2:49676092-49676111 Msa0074760:intron 15.0%
!!! ATTTAGATTTTTGTATTTGT+GGG - chr1_2:49676093-49676112 Msa0074760:intron 15.0%
!!! GTTTTTTTTGCTTATATTAT+AGG + chr1_2:49676998-49677017 None:intergenic 15.0%
!!! TTTTTGCTTATATTATAAGA+CGG + chr1_2:49677028-49677047 None:intergenic 15.0%
!! AAAACTAAAACATAAGAATT+TGG + chr1_2:49677295-49677314 None:intergenic 15.0%
!! AAAGAATAAAAACATAATGT+GGG + chr1_2:49677683-49677702 None:intergenic 15.0%
!! TAAACAAAGTAAAATGTATT+TGG - chr1_2:49679030-49679049 Msa0074760:CDS 15.0%
!!! ATATCATTTTTGAGATTATA+TGG - chr1_2:49679114-49679133 Msa0074760:CDS 15.0%
!!! TATCATTTTTGAGATTATAT+GGG - chr1_2:49679115-49679134 Msa0074760:CDS 15.0%
!!! TAAACTAAGATTAATTTGTG+TGG + chr1_2:49672487-49672506 None:intergenic 20.0%
!! CTATGAAAATTTATTGTAAC+AGG - chr1_2:49672815-49672834 Msa0074760:intron 20.0%
!!! GTTTGTTTATTTTCTTTTTC+TGG - chr1_2:49673721-49673740 Msa0074760:CDS 20.0%
!! TACCTAAGTTATATCATAAA+CGG + chr1_2:49674196-49674215 None:intergenic 20.0%
!!! GACTTATAATCTAAAACTAA+AGG - chr1_2:49674475-49674494 Msa0074760:intron 20.0%
!! TTAAAAAGAGAAAAGATGTT+TGG + chr1_2:49674608-49674627 None:intergenic 20.0%
!! ATAGACTAAAAAAACTTAGA+GGG + chr1_2:49674745-49674764 None:intergenic 20.0%
!! AATAGACTAAAAAAACTTAG+AGG + chr1_2:49674746-49674765 None:intergenic 20.0%
!! TAGTTAACTATTCTCATAAA+TGG + chr1_2:49674806-49674825 None:intergenic 20.0%
!! AAAGAGAGATAAAAAGTTAT+AGG - chr1_2:49675278-49675297 Msa0074760:intron 20.0%
!!! AAAAATATATACGTTGATTG+TGG - chr1_2:49675418-49675437 Msa0074760:intron 20.0%
!! TAACATAAACTCATATATGT+AGG + chr1_2:49675770-49675789 None:intergenic 20.0%
!! CTTATATAACTATGTCTATA+TGG + chr1_2:49675844-49675863 None:intergenic 20.0%
!!! TATTTGGACCAATATATTTT+TGG + chr1_2:49675881-49675900 None:intergenic 20.0%
!! ATAAAGAAAATCCAGTTAAA+AGG - chr1_2:49675959-49675978 Msa0074760:intron 20.0%
!! TAAAGAAAATCCAGTTAAAA+GGG - chr1_2:49675960-49675979 Msa0074760:intron 20.0%
!!! GAATATATATAATAAGTTGG+TGG - chr1_2:49676200-49676219 Msa0074760:intron 20.0%
!!! ATCTGTTTTCAATTTTTCAT+GGG + chr1_2:49676229-49676248 None:intergenic 20.0%
!!! AATCTGTTTTCAATTTTTCA+TGG + chr1_2:49676230-49676249 None:intergenic 20.0%
!!! AAATAACATTTTACTAATGC+TGG - chr1_2:49676594-49676613 Msa0074760:intron 20.0%
!! TTAAAATAACAAAAAGAGTG+TGG + chr1_2:49676851-49676870 None:intergenic 20.0%
!!! TTTTTGCTTATATTATAGGA+CGG + chr1_2:49676994-49677013 None:intergenic 20.0%
!!! GAATAAACAAAAGTTTTTCT+TGG + chr1_2:49677142-49677161 None:intergenic 20.0%
!!! GATGTAAAAACAATTTTCAT+TGG + chr1_2:49677229-49677248 None:intergenic 20.0%
!!! TTCTTTGGAAAAAGTTTTAT+AGG + chr1_2:49677254-49677273 None:intergenic 20.0%
!! GAAAGAATAAAAACATAATG+TGG + chr1_2:49677684-49677703 None:intergenic 20.0%
!! TGAAAATGTATATTGTTATG+TGG - chr1_2:49677928-49677947 Msa0074760:intron 20.0%
!! TTTAGTATTTACATATTCCA+TGG - chr1_2:49678409-49678428 Msa0074760:intron 20.0%
!! AACAATCATAAATACCATTA+AGG + chr1_2:49678902-49678921 None:intergenic 20.0%
!! TTAATGGTATTTATGATTGT+TGG - chr1_2:49678901-49678920 Msa0074760:CDS 20.0%
!!! GGAGTATTATATTATTATGA+TGG + chr1_2:49678995-49679014 None:intergenic 20.0%
!!! TGTTTATATTTAAGATCAGA+AGG + chr1_2:49679016-49679035 None:intergenic 20.0%
!!! TGTTACTTATATTTAAGACA+AGG - chr1_2:49679081-49679100 Msa0074760:CDS 20.0%
!!! GTTACTTATATTTAAGACAA+GGG - chr1_2:49679082-49679101 Msa0074760:CDS 20.0%
!!! CTTTTGCTTATATTTAAGAT+CGG + chr1_2:49679166-49679185 None:intergenic 20.0%
!! AGCAAAAGTCAAAAAATATT+TGG + chr1_2:49679216-49679235 None:intergenic 20.0%
!! TGAACATAATATATGAGAAA+TGG + chr1_2:49679290-49679309 None:intergenic 20.0%
!! AAATGAAGAGAAATACTTAT+TGG - chr1_2:49679418-49679437 Msa0074760:intron 20.0%
!!! ACATATGAGTAATATTTTCT+CGG - chr1_2:49679608-49679627 Msa0074760:intron 20.0%
!! AAACAAAGAATCTTTATGTA+AGG - chr1_2:49679745-49679764 Msa0074760:five_prime_UTR 20.0%
!! AGTGATAATATTAAGTATCA+CGG + chr1_2:49679800-49679819 None:intergenic 20.0%
!!! TAGTGTCTTCTTTTTAAATA+TGG - chr1_2:49679824-49679843 Msa0074760:five_prime_UTR 20.0%
!!! TAAACTAAGATTAATTTGTG+TGG + chr1_2:49672487-49672506 None:intergenic 20.0%
!! CTATGAAAATTTATTGTAAC+AGG - chr1_2:49672815-49672834 Msa0074760:intron 20.0%
!!! GTTTGTTTATTTTCTTTTTC+TGG - chr1_2:49673721-49673740 Msa0074760:CDS 20.0%
!! TACCTAAGTTATATCATAAA+CGG + chr1_2:49674196-49674215 None:intergenic 20.0%
!!! GACTTATAATCTAAAACTAA+AGG - chr1_2:49674475-49674494 Msa0074760:intron 20.0%
!! TTAAAAAGAGAAAAGATGTT+TGG + chr1_2:49674608-49674627 None:intergenic 20.0%
!! ATAGACTAAAAAAACTTAGA+GGG + chr1_2:49674745-49674764 None:intergenic 20.0%
!! AATAGACTAAAAAAACTTAG+AGG + chr1_2:49674746-49674765 None:intergenic 20.0%
!! TAGTTAACTATTCTCATAAA+TGG + chr1_2:49674806-49674825 None:intergenic 20.0%
!! AAAGAGAGATAAAAAGTTAT+AGG - chr1_2:49675278-49675297 Msa0074760:intron 20.0%
!!! AAAAATATATACGTTGATTG+TGG - chr1_2:49675418-49675437 Msa0074760:intron 20.0%
!! TAACATAAACTCATATATGT+AGG + chr1_2:49675770-49675789 None:intergenic 20.0%
!! CTTATATAACTATGTCTATA+TGG + chr1_2:49675844-49675863 None:intergenic 20.0%
!!! TATTTGGACCAATATATTTT+TGG + chr1_2:49675881-49675900 None:intergenic 20.0%
!! ATAAAGAAAATCCAGTTAAA+AGG - chr1_2:49675959-49675978 Msa0074760:intron 20.0%
!! TAAAGAAAATCCAGTTAAAA+GGG - chr1_2:49675960-49675979 Msa0074760:intron 20.0%
!!! GAATATATATAATAAGTTGG+TGG - chr1_2:49676200-49676219 Msa0074760:intron 20.0%
!!! ATCTGTTTTCAATTTTTCAT+GGG + chr1_2:49676229-49676248 None:intergenic 20.0%
!!! AATCTGTTTTCAATTTTTCA+TGG + chr1_2:49676230-49676249 None:intergenic 20.0%
!!! AAATAACATTTTACTAATGC+TGG - chr1_2:49676594-49676613 Msa0074760:intron 20.0%
!! TTAAAATAACAAAAAGAGTG+TGG + chr1_2:49676851-49676870 None:intergenic 20.0%
!!! TTTTTGCTTATATTATAGGA+CGG + chr1_2:49676994-49677013 None:intergenic 20.0%
!!! GAATAAACAAAAGTTTTTCT+TGG + chr1_2:49677142-49677161 None:intergenic 20.0%
!!! GATGTAAAAACAATTTTCAT+TGG + chr1_2:49677229-49677248 None:intergenic 20.0%
!!! TTCTTTGGAAAAAGTTTTAT+AGG + chr1_2:49677254-49677273 None:intergenic 20.0%
!! GAAAGAATAAAAACATAATG+TGG + chr1_2:49677684-49677703 None:intergenic 20.0%
!! TGAAAATGTATATTGTTATG+TGG - chr1_2:49677928-49677947 Msa0074760:intron 20.0%
!! TTTAGTATTTACATATTCCA+TGG - chr1_2:49678409-49678428 Msa0074760:intron 20.0%
!! AACAATCATAAATACCATTA+AGG + chr1_2:49678902-49678921 None:intergenic 20.0%
!! TTAATGGTATTTATGATTGT+TGG - chr1_2:49678901-49678920 Msa0074760:CDS 20.0%
!!! GGAGTATTATATTATTATGA+TGG + chr1_2:49678995-49679014 None:intergenic 20.0%
!!! TGTTTATATTTAAGATCAGA+AGG + chr1_2:49679016-49679035 None:intergenic 20.0%
!!! TGTTACTTATATTTAAGACA+AGG - chr1_2:49679081-49679100 Msa0074760:CDS 20.0%
!!! GTTACTTATATTTAAGACAA+GGG - chr1_2:49679082-49679101 Msa0074760:CDS 20.0%
!!! CTTTTGCTTATATTTAAGAT+CGG + chr1_2:49679166-49679185 None:intergenic 20.0%
!! AGCAAAAGTCAAAAAATATT+TGG + chr1_2:49679216-49679235 None:intergenic 20.0%
!! TGAACATAATATATGAGAAA+TGG + chr1_2:49679290-49679309 None:intergenic 20.0%
!! AAATGAAGAGAAATACTTAT+TGG - chr1_2:49679418-49679437 Msa0074760:intron 20.0%
!!! ACATATGAGTAATATTTTCT+CGG - chr1_2:49679608-49679627 Msa0074760:intron 20.0%
!! AAACAAAGAATCTTTATGTA+AGG - chr1_2:49679745-49679764 Msa0074760:five_prime_UTR 20.0%
!! AGTGATAATATTAAGTATCA+CGG + chr1_2:49679800-49679819 None:intergenic 20.0%
!!! TAGTGTCTTCTTTTTAAATA+TGG - chr1_2:49679824-49679843 Msa0074760:five_prime_UTR 20.0%
!!! ATGGTTGATTTGATTTAGAT+TGG + chr1_2:49672395-49672414 None:intergenic 25.0%
! TTAGTTGAATTGAACTGAAA+GGG + chr1_2:49672633-49672652 None:intergenic 25.0%
! TTTAGTTGAATTGAACTGAA+AGG + chr1_2:49672634-49672653 None:intergenic 25.0%
! GTTTCTTTGAATGATGTATA+GGG + chr1_2:49672720-49672739 None:intergenic 25.0%
! CGATCTATTAAATTCAATTC+TGG - chr1_2:49673826-49673845 Msa0074760:intron 25.0%
!!! AAAACTTGTTGATCATGATT+TGG - chr1_2:49673956-49673975 Msa0074760:intron 25.0%
! GTAAAGTATGAGATTAAGAA+TGG - chr1_2:49674030-49674049 Msa0074760:intron 25.0%
! GACATATGATAAGACATATA+AGG - chr1_2:49674497-49674516 Msa0074760:intron 25.0%
! TGAGTCATGATATATAAGTA+AGG - chr1_2:49674829-49674848 Msa0074760:intron 25.0%
! AAATTTAGACACATTGTTGT+TGG - chr1_2:49675051-49675070 Msa0074760:intron 25.0%
!! AATTTAGACACATTGTTGTT+GGG - chr1_2:49675052-49675071 Msa0074760:intron 25.0%
! TTAAAATTTGACATCAGACA+CGG + chr1_2:49675641-49675660 None:intergenic 25.0%
! TATTCCTAAAGTGCAAATAA+CGG - chr1_2:49675672-49675691 Msa0074760:intron 25.0%
!!! CCTTTTTTTTTAGTACGATA+GGG - chr1_2:49675731-49675750 Msa0074760:intron 25.0%
!! TTTAGCTAATGCATTTGTTA+TGG + chr1_2:49675816-49675835 None:intergenic 25.0%
! GGAGTTAACCAAAAATATAT+TGG - chr1_2:49675870-49675889 Msa0074760:CDS 25.0%
! TATATTGGTCCAAATAGTAA+AGG - chr1_2:49675885-49675904 Msa0074760:CDS 25.0%
! GTGGTGCAAAAAATAAAAAA+GGG + chr1_2:49676283-49676302 None:intergenic 25.0%
! AGAGATAAGTATATTATACG+TGG + chr1_2:49676302-49676321 None:intergenic 25.0%
! GGAAAAACAACATCAAATTA+TGG + chr1_2:49676461-49676480 None:intergenic 25.0%
! ATATGAAAACACTCAGATAT+GGG + chr1_2:49676482-49676501 None:intergenic 25.0%
! AATATGAAAACACTCAGATA+TGG + chr1_2:49676483-49676502 None:intergenic 25.0%
! GGTATTATTTACATGGAAAA+AGG + chr1_2:49676809-49676828 None:intergenic 25.0%
!! GTCTGTTTTGCTTATATTTT+GGG + chr1_2:49677067-49677086 None:intergenic 25.0%
!! TGTCTGTTTTGCTTATATTT+TGG + chr1_2:49677068-49677087 None:intergenic 25.0%
!!! AAACAATTTTCATTGGCTAT+TGG + chr1_2:49677222-49677241 None:intergenic 25.0%
! TTTCTTCTTATAATTTGGGA+CGG - chr1_2:49677334-49677353 Msa0074760:intron 25.0%
!! ATTTTGCTTATAATTGTGAC+CGG + chr1_2:49677428-49677447 None:intergenic 25.0%
! CATTGAATTAATGATGCATA+TGG - chr1_2:49677463-49677482 Msa0074760:intron 25.0%
! CATTCATTAAATGATGTATG+TGG + chr1_2:49677502-49677521 None:intergenic 25.0%
! TATCAATATAATACACCTTC+CGG + chr1_2:49677559-49677578 None:intergenic 25.0%
!! TATCATTTCTCCATTTTCAT+TGG + chr1_2:49677612-49677631 None:intergenic 25.0%
! GTACAAAAATTGTCACAAAA+TGG + chr1_2:49677644-49677663 None:intergenic 25.0%
!! TTCTTTTTCTCTCTTCTTAT+TGG + chr1_2:49677737-49677756 None:intergenic 25.0%
! AATAAGAAGAGAGAAAAAGA+AGG - chr1_2:49677736-49677755 Msa0074760:intron 25.0%
! AAAATAAACCTTTGTTAGTG+AGG - chr1_2:49677808-49677827 Msa0074760:intron 25.0%
! AGTACATTATCATGGAAAAA+TGG + chr1_2:49677908-49677927 None:intergenic 25.0%
!!! CATTTTCAAGTACATTATCA+TGG + chr1_2:49677916-49677935 None:intergenic 25.0%
! TGCATTGTTTACATAAGAAA+GGG + chr1_2:49678060-49678079 None:intergenic 25.0%
! ATGCATTGTTTACATAAGAA+AGG + chr1_2:49678061-49678080 None:intergenic 25.0%
! AACAAATGATACAAACTCAT+TGG + chr1_2:49678292-49678311 None:intergenic 25.0%
!!! ATATTATTATGATGGATCCA+AGG + chr1_2:49678987-49679006 None:intergenic 25.0%
! GAATGTATTTGATCTAAATG+TGG + chr1_2:49679057-49679076 None:intergenic 25.0%
! ATAATATATGAGAAATGGAG+TGG + chr1_2:49679285-49679304 None:intergenic 25.0%
! TTTCACATTGTTTAGAAAAG+TGG - chr1_2:49679379-49679398 Msa0074760:CDS 25.0%
!! ATTGTTTAGAAAAGTGGTTT+TGG - chr1_2:49679385-49679404 Msa0074760:CDS 25.0%
!! TTGTTTAGAAAAGTGGTTTT+GGG - chr1_2:49679386-49679405 Msa0074760:CDS 25.0%
! ATAGAAAATAGAAGATCCAA+CGG + chr1_2:49679487-49679506 None:intergenic 25.0%
!! CAAAATACTAGTACTTTTAG+AGG + chr1_2:49679718-49679737 None:intergenic 25.0%
!!! CTCTAAAAGTACTAGTATTT+TGG - chr1_2:49679716-49679735 Msa0074760:five_prime_UTR 25.0%
! AAAGAATCTTTATGTAAGGT+GGG - chr1_2:49679749-49679768 Msa0074760:five_prime_UTR 25.0%
! TGATAATATTAAGTATCACG+GGG + chr1_2:49679798-49679817 None:intergenic 25.0%
! GTGATAATATTAAGTATCAC+GGG + chr1_2:49679799-49679818 None:intergenic 25.0%
! CAAAGATGTTAACATTTATG+AGG - chr1_2:49679849-49679868 Msa0074760:five_prime_UTR 25.0%
!!! ATGGTTGATTTGATTTAGAT+TGG + chr1_2:49672395-49672414 None:intergenic 25.0%
! TTAGTTGAATTGAACTGAAA+GGG + chr1_2:49672633-49672652 None:intergenic 25.0%
! TTTAGTTGAATTGAACTGAA+AGG + chr1_2:49672634-49672653 None:intergenic 25.0%
! GTTTCTTTGAATGATGTATA+GGG + chr1_2:49672720-49672739 None:intergenic 25.0%
! CGATCTATTAAATTCAATTC+TGG - chr1_2:49673826-49673845 Msa0074760:intron 25.0%
!!! AAAACTTGTTGATCATGATT+TGG - chr1_2:49673956-49673975 Msa0074760:intron 25.0%
! GTAAAGTATGAGATTAAGAA+TGG - chr1_2:49674030-49674049 Msa0074760:intron 25.0%
! GACATATGATAAGACATATA+AGG - chr1_2:49674497-49674516 Msa0074760:intron 25.0%
! TGAGTCATGATATATAAGTA+AGG - chr1_2:49674829-49674848 Msa0074760:intron 25.0%
! AAATTTAGACACATTGTTGT+TGG - chr1_2:49675051-49675070 Msa0074760:intron 25.0%
!! AATTTAGACACATTGTTGTT+GGG - chr1_2:49675052-49675071 Msa0074760:intron 25.0%
! TTAAAATTTGACATCAGACA+CGG + chr1_2:49675641-49675660 None:intergenic 25.0%
! TATTCCTAAAGTGCAAATAA+CGG - chr1_2:49675672-49675691 Msa0074760:intron 25.0%
!!! CCTTTTTTTTTAGTACGATA+GGG - chr1_2:49675731-49675750 Msa0074760:intron 25.0%
!! TTTAGCTAATGCATTTGTTA+TGG + chr1_2:49675816-49675835 None:intergenic 25.0%
! GGAGTTAACCAAAAATATAT+TGG - chr1_2:49675870-49675889 Msa0074760:CDS 25.0%
! TATATTGGTCCAAATAGTAA+AGG - chr1_2:49675885-49675904 Msa0074760:CDS 25.0%
! GTGGTGCAAAAAATAAAAAA+GGG + chr1_2:49676283-49676302 None:intergenic 25.0%
! AGAGATAAGTATATTATACG+TGG + chr1_2:49676302-49676321 None:intergenic 25.0%
! GGAAAAACAACATCAAATTA+TGG + chr1_2:49676461-49676480 None:intergenic 25.0%
! ATATGAAAACACTCAGATAT+GGG + chr1_2:49676482-49676501 None:intergenic 25.0%
! AATATGAAAACACTCAGATA+TGG + chr1_2:49676483-49676502 None:intergenic 25.0%
! GGTATTATTTACATGGAAAA+AGG + chr1_2:49676809-49676828 None:intergenic 25.0%
!! GTCTGTTTTGCTTATATTTT+GGG + chr1_2:49677067-49677086 None:intergenic 25.0%
!! TGTCTGTTTTGCTTATATTT+TGG + chr1_2:49677068-49677087 None:intergenic 25.0%
!!! AAACAATTTTCATTGGCTAT+TGG + chr1_2:49677222-49677241 None:intergenic 25.0%
! TTTCTTCTTATAATTTGGGA+CGG - chr1_2:49677334-49677353 Msa0074760:intron 25.0%
!! ATTTTGCTTATAATTGTGAC+CGG + chr1_2:49677428-49677447 None:intergenic 25.0%
! CATTGAATTAATGATGCATA+TGG - chr1_2:49677463-49677482 Msa0074760:intron 25.0%
! CATTCATTAAATGATGTATG+TGG + chr1_2:49677502-49677521 None:intergenic 25.0%
! TATCAATATAATACACCTTC+CGG + chr1_2:49677559-49677578 None:intergenic 25.0%
!! TATCATTTCTCCATTTTCAT+TGG + chr1_2:49677612-49677631 None:intergenic 25.0%
! GTACAAAAATTGTCACAAAA+TGG + chr1_2:49677644-49677663 None:intergenic 25.0%
!! TTCTTTTTCTCTCTTCTTAT+TGG + chr1_2:49677737-49677756 None:intergenic 25.0%
! AATAAGAAGAGAGAAAAAGA+AGG - chr1_2:49677736-49677755 Msa0074760:intron 25.0%
! AAAATAAACCTTTGTTAGTG+AGG - chr1_2:49677808-49677827 Msa0074760:intron 25.0%
! AGTACATTATCATGGAAAAA+TGG + chr1_2:49677908-49677927 None:intergenic 25.0%
!!! CATTTTCAAGTACATTATCA+TGG + chr1_2:49677916-49677935 None:intergenic 25.0%
! TGCATTGTTTACATAAGAAA+GGG + chr1_2:49678060-49678079 None:intergenic 25.0%
! ATGCATTGTTTACATAAGAA+AGG + chr1_2:49678061-49678080 None:intergenic 25.0%
! AACAAATGATACAAACTCAT+TGG + chr1_2:49678292-49678311 None:intergenic 25.0%
!!! ATATTATTATGATGGATCCA+AGG + chr1_2:49678987-49679006 None:intergenic 25.0%
! GAATGTATTTGATCTAAATG+TGG + chr1_2:49679057-49679076 None:intergenic 25.0%
! ATAATATATGAGAAATGGAG+TGG + chr1_2:49679285-49679304 None:intergenic 25.0%
! TTTCACATTGTTTAGAAAAG+TGG - chr1_2:49679379-49679398 Msa0074760:CDS 25.0%
!! ATTGTTTAGAAAAGTGGTTT+TGG - chr1_2:49679385-49679404 Msa0074760:CDS 25.0%
!! TTGTTTAGAAAAGTGGTTTT+GGG - chr1_2:49679386-49679405 Msa0074760:CDS 25.0%
! ATAGAAAATAGAAGATCCAA+CGG + chr1_2:49679487-49679506 None:intergenic 25.0%
!! CAAAATACTAGTACTTTTAG+AGG + chr1_2:49679718-49679737 None:intergenic 25.0%
!!! CTCTAAAAGTACTAGTATTT+TGG - chr1_2:49679716-49679735 Msa0074760:five_prime_UTR 25.0%
! AAAGAATCTTTATGTAAGGT+GGG - chr1_2:49679749-49679768 Msa0074760:five_prime_UTR 25.0%
! TGATAATATTAAGTATCACG+GGG + chr1_2:49679798-49679817 None:intergenic 25.0%
! GTGATAATATTAAGTATCAC+GGG + chr1_2:49679799-49679818 None:intergenic 25.0%
! CAAAGATGTTAACATTTATG+AGG - chr1_2:49679849-49679868 Msa0074760:five_prime_UTR 25.0%
TCGAGATTAATAGACAAGTA+TGG + chr1_2:49672414-49672433 None:intergenic 30.0%
TCCAGATTTCGATATTCAAA+TGG - chr1_2:49672678-49672697 Msa0074760:intron 30.0%
TCCATTTGAATATCGAAATC+TGG + chr1_2:49672682-49672701 None:intergenic 30.0%
GGTTTCTTTGAATGATGTAT+AGG + chr1_2:49672721-49672740 None:intergenic 30.0%
CAGAATGATAATTACGTGAA+AGG + chr1_2:49672742-49672761 None:intergenic 30.0%
ATTCATGTAGTTATCTGCAT+CGG + chr1_2:49672992-49673011 None:intergenic 30.0%
GTTCATACAAGAAGATGAAA+TGG - chr1_2:49673020-49673039 Msa0074760:intron 30.0%
!!! ACACTTTTTCATTCATCAGT+CGG - chr1_2:49673114-49673133 Msa0074760:intron 30.0%
!! TTTCTTTTTCTGGTGTTTCA+TGG - chr1_2:49673731-49673750 Msa0074760:CDS 30.0%
! TTGATCATGATTTGGATGAA+TGG - chr1_2:49673964-49673983 Msa0074760:intron 30.0%
TACGACAGAAGAAAAAGAAA+AGG + chr1_2:49674013-49674032 None:intergenic 30.0%
ATTAAGAATGGTGTTTGAGT+TGG - chr1_2:49674042-49674061 Msa0074760:intron 30.0%
ATCCAACAAAAAGTTCAGTT+AGG - chr1_2:49674081-49674100 Msa0074760:intron 30.0%
AGCCGTTTATGATATAACTT+AGG - chr1_2:49674191-49674210 Msa0074760:intron 30.0%
!! ACTATGGTGTTGCAATTATA+TGG - chr1_2:49675022-49675041 Msa0074760:intron 30.0%
!!! ATCTTTAGTGTCGATTTTAG+TGG - chr1_2:49675114-49675133 Msa0074760:intron 30.0%
!!! TCTTTAGTGTCGATTTTAGT+GGG - chr1_2:49675115-49675134 Msa0074760:intron 30.0%
!! TGGGTTAATTTGCTTTCTTA+TGG - chr1_2:49675134-49675153 Msa0074760:intron 30.0%
GATAAAAAGTTATAGGAGAG+TGG - chr1_2:49675285-49675304 Msa0074760:intron 30.0%
! AATATATACGTTGATTGTGG+TGG - chr1_2:49675421-49675440 Msa0074760:intron 30.0%
ATTCCTAAAGTGCAAATAAC+GGG - chr1_2:49675673-49675692 Msa0074760:intron 30.0%
! AAGAAGCCTGTTTGTTAAAT+AGG - chr1_2:49675702-49675721 Msa0074760:CDS 30.0%
! AGAAGCCTGTTTGTTAAATA+GGG - chr1_2:49675703-49675722 Msa0074760:CDS 30.0%
!!! GCCTTTTTTTTTAGTACGAT+AGG - chr1_2:49675730-49675749 Msa0074760:intron 30.0%
CCCTATCGTACTAAAAAAAA+AGG + chr1_2:49675734-49675753 None:intergenic 30.0%
!!! TTTTTTTTAGTACGATAGGG+TGG - chr1_2:49675734-49675753 Msa0074760:intron 30.0%
! ATTACCTTCAGTGTATCTTT+TGG + chr1_2:49675793-49675812 None:intergenic 30.0%
TGACCAAATCCTTTACTATT+TGG + chr1_2:49675897-49675916 None:intergenic 30.0%
! TACATTCATTCCCTTTTAAC+TGG + chr1_2:49675973-49675992 None:intergenic 30.0%
GAAAATCTATAAGACACACA+AGG + chr1_2:49675996-49676015 None:intergenic 30.0%
! ATTTTTGTATTTGTGGGACT+AGG - chr1_2:49676099-49676118 Msa0074760:intron 30.0%
CGTGGTGCAAAAAATAAAAA+AGG + chr1_2:49676284-49676303 None:intergenic 30.0%
GTACAGTGGTATTATTTACA+TGG + chr1_2:49676816-49676835 None:intergenic 30.0%
!! TTTTCATTGGCTATTGGTTA+TGG + chr1_2:49677216-49677235 None:intergenic 30.0%
GTTATGCTTATAATAGTGAC+CGG - chr1_2:49677537-49677556 Msa0074760:intron 30.0%
! ATTTCTCCATTTTCATTGGT+TGG + chr1_2:49677608-49677627 None:intergenic 30.0%
AAGACAATAGAGAGAGAAAA+AGG + chr1_2:49677711-49677730 None:intergenic 30.0%
TCACAAAAGTTGTCACATAT+TGG - chr1_2:49677762-49677781 Msa0074760:intron 30.0%
CATTATCATGGAAAAATGGT+GGG + chr1_2:49677904-49677923 None:intergenic 30.0%
ACATTATCATGGAAAAATGG+TGG + chr1_2:49677905-49677924 None:intergenic 30.0%
TATTGTTATGTGGCTAATGT+TGG - chr1_2:49677938-49677957 Msa0074760:intron 30.0%
! TGAACAGACATTCTTGATTT+TGG - chr1_2:49678102-49678121 Msa0074760:intron 30.0%
TCAGAGACTTTATAAATGGT+GGG + chr1_2:49678142-49678161 None:intergenic 30.0%
AAGCTCAGAGACTTTATAAA+TGG + chr1_2:49678146-49678165 None:intergenic 30.0%
CATTGAGAAACGTAAGATTA+TGG - chr1_2:49678197-49678216 Msa0074760:intron 30.0%
! CAAATCTAAGTTTTCTATGC+AGG - chr1_2:49678225-49678244 Msa0074760:intron 30.0%
AAGTACTAAGTAGTGTACAT+AGG + chr1_2:49678383-49678402 None:intergenic 30.0%
TTAGGCAACATATTAGGAAA+TGG + chr1_2:49678615-49678634 None:intergenic 30.0%
GTAAATAGTATGCTCCTTAA+TGG - chr1_2:49678885-49678904 Msa0074760:CDS 30.0%
! TGCTTATATTTAAGATCGGA+CGG + chr1_2:49679162-49679181 None:intergenic 30.0%
!! TGTTTAGAAAAGTGGTTTTG+GGG - chr1_2:49679387-49679406 Msa0074760:CDS 30.0%
CAAAGAATCTTTATGTAAGG+TGG - chr1_2:49679748-49679767 Msa0074760:five_prime_UTR 30.0%
! AATGCTTTTCTGGATTATCT+TGG + chr1_2:49679943-49679962 None:intergenic 30.0%
TCGAGATTAATAGACAAGTA+TGG + chr1_2:49672414-49672433 None:intergenic 30.0%
TCCAGATTTCGATATTCAAA+TGG - chr1_2:49672678-49672697 Msa0074760:intron 30.0%
TCCATTTGAATATCGAAATC+TGG + chr1_2:49672682-49672701 None:intergenic 30.0%
GGTTTCTTTGAATGATGTAT+AGG + chr1_2:49672721-49672740 None:intergenic 30.0%
CAGAATGATAATTACGTGAA+AGG + chr1_2:49672742-49672761 None:intergenic 30.0%
ATTCATGTAGTTATCTGCAT+CGG + chr1_2:49672992-49673011 None:intergenic 30.0%
GTTCATACAAGAAGATGAAA+TGG - chr1_2:49673020-49673039 Msa0074760:intron 30.0%
!!! ACACTTTTTCATTCATCAGT+CGG - chr1_2:49673114-49673133 Msa0074760:intron 30.0%
!! TTTCTTTTTCTGGTGTTTCA+TGG - chr1_2:49673731-49673750 Msa0074760:CDS 30.0%
! TTGATCATGATTTGGATGAA+TGG - chr1_2:49673964-49673983 Msa0074760:intron 30.0%
TACGACAGAAGAAAAAGAAA+AGG + chr1_2:49674013-49674032 None:intergenic 30.0%
ATTAAGAATGGTGTTTGAGT+TGG - chr1_2:49674042-49674061 Msa0074760:intron 30.0%
ATCCAACAAAAAGTTCAGTT+AGG - chr1_2:49674081-49674100 Msa0074760:intron 30.0%
AGCCGTTTATGATATAACTT+AGG - chr1_2:49674191-49674210 Msa0074760:intron 30.0%
!! ACTATGGTGTTGCAATTATA+TGG - chr1_2:49675022-49675041 Msa0074760:intron 30.0%
!!! ATCTTTAGTGTCGATTTTAG+TGG - chr1_2:49675114-49675133 Msa0074760:intron 30.0%
!!! TCTTTAGTGTCGATTTTAGT+GGG - chr1_2:49675115-49675134 Msa0074760:intron 30.0%
!! TGGGTTAATTTGCTTTCTTA+TGG - chr1_2:49675134-49675153 Msa0074760:intron 30.0%
GATAAAAAGTTATAGGAGAG+TGG - chr1_2:49675285-49675304 Msa0074760:intron 30.0%
! AATATATACGTTGATTGTGG+TGG - chr1_2:49675421-49675440 Msa0074760:intron 30.0%
ATTCCTAAAGTGCAAATAAC+GGG - chr1_2:49675673-49675692 Msa0074760:intron 30.0%
! AAGAAGCCTGTTTGTTAAAT+AGG - chr1_2:49675702-49675721 Msa0074760:CDS 30.0%
! AGAAGCCTGTTTGTTAAATA+GGG - chr1_2:49675703-49675722 Msa0074760:CDS 30.0%
!!! GCCTTTTTTTTTAGTACGAT+AGG - chr1_2:49675730-49675749 Msa0074760:intron 30.0%
CCCTATCGTACTAAAAAAAA+AGG + chr1_2:49675734-49675753 None:intergenic 30.0%
!!! TTTTTTTTAGTACGATAGGG+TGG - chr1_2:49675734-49675753 Msa0074760:intron 30.0%
! ATTACCTTCAGTGTATCTTT+TGG + chr1_2:49675793-49675812 None:intergenic 30.0%
TGACCAAATCCTTTACTATT+TGG + chr1_2:49675897-49675916 None:intergenic 30.0%
! TACATTCATTCCCTTTTAAC+TGG + chr1_2:49675973-49675992 None:intergenic 30.0%
GAAAATCTATAAGACACACA+AGG + chr1_2:49675996-49676015 None:intergenic 30.0%
! ATTTTTGTATTTGTGGGACT+AGG - chr1_2:49676099-49676118 Msa0074760:intron 30.0%
CGTGGTGCAAAAAATAAAAA+AGG + chr1_2:49676284-49676303 None:intergenic 30.0%
GTACAGTGGTATTATTTACA+TGG + chr1_2:49676816-49676835 None:intergenic 30.0%
!! TTTTCATTGGCTATTGGTTA+TGG + chr1_2:49677216-49677235 None:intergenic 30.0%
GTTATGCTTATAATAGTGAC+CGG - chr1_2:49677537-49677556 Msa0074760:intron 30.0%
! ATTTCTCCATTTTCATTGGT+TGG + chr1_2:49677608-49677627 None:intergenic 30.0%
AAGACAATAGAGAGAGAAAA+AGG + chr1_2:49677711-49677730 None:intergenic 30.0%
TCACAAAAGTTGTCACATAT+TGG - chr1_2:49677762-49677781 Msa0074760:intron 30.0%
CATTATCATGGAAAAATGGT+GGG + chr1_2:49677904-49677923 None:intergenic 30.0%
ACATTATCATGGAAAAATGG+TGG + chr1_2:49677905-49677924 None:intergenic 30.0%
TATTGTTATGTGGCTAATGT+TGG - chr1_2:49677938-49677957 Msa0074760:intron 30.0%
! TGAACAGACATTCTTGATTT+TGG - chr1_2:49678102-49678121 Msa0074760:intron 30.0%
TCAGAGACTTTATAAATGGT+GGG + chr1_2:49678142-49678161 None:intergenic 30.0%
AAGCTCAGAGACTTTATAAA+TGG + chr1_2:49678146-49678165 None:intergenic 30.0%
CATTGAGAAACGTAAGATTA+TGG - chr1_2:49678197-49678216 Msa0074760:intron 30.0%
! CAAATCTAAGTTTTCTATGC+AGG - chr1_2:49678225-49678244 Msa0074760:intron 30.0%
AAGTACTAAGTAGTGTACAT+AGG + chr1_2:49678383-49678402 None:intergenic 30.0%
TTAGGCAACATATTAGGAAA+TGG + chr1_2:49678615-49678634 None:intergenic 30.0%
GTAAATAGTATGCTCCTTAA+TGG - chr1_2:49678885-49678904 Msa0074760:CDS 30.0%
! TGCTTATATTTAAGATCGGA+CGG + chr1_2:49679162-49679181 None:intergenic 30.0%
!! TGTTTAGAAAAGTGGTTTTG+GGG - chr1_2:49679387-49679406 Msa0074760:CDS 30.0%
CAAAGAATCTTTATGTAAGG+TGG - chr1_2:49679748-49679767 Msa0074760:five_prime_UTR 30.0%
! AATGCTTTTCTGGATTATCT+TGG + chr1_2:49679943-49679962 None:intergenic 30.0%
ATTTAGATTGGAAGAGTGAG+TGG + chr1_2:49672383-49672402 None:intergenic 35.0%
! GAATATCGAAATCTGGAACA+TGG + chr1_2:49672675-49672694 None:intergenic 35.0%
ATGAGATCATGGAACTATTG+TGG - chr1_2:49672848-49672867 Msa0074760:intron 35.0%
ATGGAACTATTGTGGCAAAA+CGG - chr1_2:49672856-49672875 Msa0074760:intron 35.0%
TTTCTGAACTGAAATCGTGA+CGG + chr1_2:49673095-49673114 None:intergenic 35.0%
! CAATTCTGGATCCAATTTTG+TGG - chr1_2:49673840-49673859 Msa0074760:intron 35.0%
!! GTTACTACTCTAGTTGATAG+CGG - chr1_2:49673896-49673915 Msa0074760:intron 35.0%
!! GTGTTTGAGTTGGTATTTGT+AGG - chr1_2:49674052-49674071 Msa0074760:intron 35.0%
! AGCCTAACTGAACTTTTTGT+TGG + chr1_2:49674086-49674105 None:intergenic 35.0%
AATGGTGACACTCTATATAG+AGG - chr1_2:49674922-49674941 Msa0074760:intron 35.0%
CTCTATATAGAGGTGAATAC+AGG - chr1_2:49674932-49674951 Msa0074760:intron 35.0%
ATATAGAGGTGAATACAGGA+AGG - chr1_2:49674936-49674955 Msa0074760:intron 35.0%
CTCTATATAGAGGTGAATAC+AGG - chr1_2:49674932-49674951 Msa0074760:intron 35.0%
ATATAGAGGTGAATACAGGA+AGG - chr1_2:49674936-49674955 Msa0074760:intron 35.0%
CTTGAGAGTAATACTCTCTA+AGG + chr1_2:49675079-49675098 None:intergenic 35.0%
AGTATTACTCTCAAGATCTC+AGG - chr1_2:49675084-49675103 Msa0074760:intron 35.0%
TTAACATCGTCTTCTCTTGA+TGG + chr1_2:49675259-49675278 None:intergenic 35.0%
TTCAGTATGTTTGGATTCCA+AGG - chr1_2:49675562-49675581 Msa0074760:CDS 35.0%
ATTAATTCTTTCCCACTCCT+TGG + chr1_2:49675582-49675601 None:intergenic 35.0%
TGTTCCAAGCAGATTTCATA+CGG + chr1_2:49675618-49675637 None:intergenic 35.0%
TTCCTAAAGTGCAAATAACG+GGG - chr1_2:49675674-49675693 Msa0074760:intron 35.0%
GTTACCAAAAGATACACTGA+AGG - chr1_2:49675786-49675805 Msa0074760:intron 35.0%
GGTCCAAATAGTAAAGGATT+TGG - chr1_2:49675891-49675910 Msa0074760:CDS 35.0%
GTTTAGTAGTGACTCTCTAT+CGG + chr1_2:49676018-49676037 None:intergenic 35.0%
GATAGAGAGTCACTACTAAA+CGG - chr1_2:49676017-49676036 Msa0074760:intron 35.0%
AAAAAGGGACAACAAACTCT+TGG + chr1_2:49676268-49676287 None:intergenic 35.0%
!!! TCTGTTTGTTTTGCTGCAAA+AGG - chr1_2:49676319-49676338 Msa0074760:intron 35.0%
!!! AGGATGTCGATTTTGAATGT+CGG - chr1_2:49676339-49676358 Msa0074760:intron 35.0%
GAAGAAAAAAAACAACACCG+TGG - chr1_2:49676362-49676381 Msa0074760:intron 35.0%
! ATCCAACATTGAAGCTTTGT+CGG + chr1_2:49676675-49676694 None:intergenic 35.0%
TAAGAACACATGCAAACTAG+AGG + chr1_2:49676768-49676787 None:intergenic 35.0%
TGCTTATATTATAGGACGGA+GGG + chr1_2:49676990-49677009 None:intergenic 35.0%
TTGCTTATATTATAGGACGG+AGG + chr1_2:49676991-49677010 None:intergenic 35.0%
GATAAGTGTATTTAACCCTC+CGG - chr1_2:49677406-49677425 Msa0074760:intron 35.0%
!! ATTTTCATTGGTTGGTTGGT+GGG + chr1_2:49677600-49677619 None:intergenic 35.0%
TAATGTGGGTATAAGAGAGA+TGG + chr1_2:49677669-49677688 None:intergenic 35.0%
TCACGTGGCTAATGTTTATT+GGG - chr1_2:49677867-49677886 Msa0074760:intron 35.0%
! TAATGTTGGTTGGTTGAACA+AGG - chr1_2:49677952-49677971 Msa0074760:intron 35.0%
AGAAAGGGTTGTGTTAATTG+AGG + chr1_2:49678045-49678064 None:intergenic 35.0%
CTCAGAGACTTTATAAATGG+TGG + chr1_2:49678143-49678162 None:intergenic 35.0%
! CTGAGCTTCAAAACAGTTTT+AGG - chr1_2:49678158-49678177 Msa0074760:intron 35.0%
!!! AGCTTCAAAACAGTTTTAGG+AGG - chr1_2:49678161-49678180 Msa0074760:intron 35.0%
! GTACATGCTTTAAGTGCAAA+AGG - chr1_2:49678253-49678272 Msa0074760:intron 35.0%
! TGATACAAACTCATTGGCTA+TGG + chr1_2:49678286-49678305 None:intergenic 35.0%
AAAATGACAAAACACGACCA+TGG + chr1_2:49678429-49678448 None:intergenic 35.0%
TTTATGCAGATGATGTCCAT+GGG - chr1_2:49678471-49678490 Msa0074760:intron 35.0%
ATGATACCTATGATGTTTCC+TGG - chr1_2:49678501-49678520 Msa0074760:intron 35.0%
TGAATTCCAGGAAACATCAT+AGG + chr1_2:49678510-49678529 None:intergenic 35.0%
TGGAATTCAGCAATTTATGC+CGG - chr1_2:49678521-49678540 Msa0074760:intron 35.0%
ATATTAGGAAATGGCATCAC+TGG + chr1_2:49678606-49678625 None:intergenic 35.0%
GGAGAATTAGGCAACATATT+AGG + chr1_2:49678621-49678640 None:intergenic 35.0%
! TTGATTTTCTGCTTGCATTC+TGG + chr1_2:49678742-49678761 None:intergenic 35.0%
! TTTGGAATGCGTGATTGATT+TGG + chr1_2:49678801-49678820 None:intergenic 35.0%
! TGATTGTTGGACATCTTTTG+AGG - chr1_2:49678914-49678933 Msa0074760:CDS 35.0%
ATTGCATTAAGGGAAGAGTT+GGG + chr1_2:49679687-49679706 None:intergenic 35.0%
AATTGCATTAAGGGAAGAGT+TGG + chr1_2:49679688-49679707 None:intergenic 35.0%
GGAGCTAAGAATTGCATTAA+GGG + chr1_2:49679697-49679716 None:intergenic 35.0%
AGGAGCTAAGAATTGCATTA+AGG + chr1_2:49679698-49679717 None:intergenic 35.0%
TGAGGTTCTGTTTGCAAATT+TGG - chr1_2:49679867-49679886 Msa0074760:five_prime_UTR 35.0%
! CTGTTTGCAAATTTGGAATC+AGG - chr1_2:49679874-49679893 Msa0074760:five_prime_UTR 35.0%
!! AATCCAGAAAAGCATTAGTC+AGG - chr1_2:49679947-49679966 Msa0074760:five_prime_UTR 35.0%
! TTACCTGACTAATGCTTTTC+TGG + chr1_2:49679953-49679972 None:intergenic 35.0%
ATTTAGATTGGAAGAGTGAG+TGG + chr1_2:49672383-49672402 None:intergenic 35.0%
! GAATATCGAAATCTGGAACA+TGG + chr1_2:49672675-49672694 None:intergenic 35.0%
ATGAGATCATGGAACTATTG+TGG - chr1_2:49672848-49672867 Msa0074760:intron 35.0%
ATGGAACTATTGTGGCAAAA+CGG - chr1_2:49672856-49672875 Msa0074760:intron 35.0%
TTTCTGAACTGAAATCGTGA+CGG + chr1_2:49673095-49673114 None:intergenic 35.0%
! CAATTCTGGATCCAATTTTG+TGG - chr1_2:49673840-49673859 Msa0074760:intron 35.0%
!! GTTACTACTCTAGTTGATAG+CGG - chr1_2:49673896-49673915 Msa0074760:intron 35.0%
!! GTGTTTGAGTTGGTATTTGT+AGG - chr1_2:49674052-49674071 Msa0074760:intron 35.0%
! AGCCTAACTGAACTTTTTGT+TGG + chr1_2:49674086-49674105 None:intergenic 35.0%
AATGGTGACACTCTATATAG+AGG - chr1_2:49674922-49674941 Msa0074760:intron 35.0%
CTCTATATAGAGGTGAATAC+AGG - chr1_2:49674932-49674951 Msa0074760:intron 35.0%
ATATAGAGGTGAATACAGGA+AGG - chr1_2:49674936-49674955 Msa0074760:intron 35.0%
CTCTATATAGAGGTGAATAC+AGG - chr1_2:49674932-49674951 Msa0074760:intron 35.0%
ATATAGAGGTGAATACAGGA+AGG - chr1_2:49674936-49674955 Msa0074760:intron 35.0%
CTTGAGAGTAATACTCTCTA+AGG + chr1_2:49675079-49675098 None:intergenic 35.0%
AGTATTACTCTCAAGATCTC+AGG - chr1_2:49675084-49675103 Msa0074760:intron 35.0%
TTAACATCGTCTTCTCTTGA+TGG + chr1_2:49675259-49675278 None:intergenic 35.0%
TTCAGTATGTTTGGATTCCA+AGG - chr1_2:49675562-49675581 Msa0074760:CDS 35.0%
ATTAATTCTTTCCCACTCCT+TGG + chr1_2:49675582-49675601 None:intergenic 35.0%
TGTTCCAAGCAGATTTCATA+CGG + chr1_2:49675618-49675637 None:intergenic 35.0%
TTCCTAAAGTGCAAATAACG+GGG - chr1_2:49675674-49675693 Msa0074760:intron 35.0%
GTTACCAAAAGATACACTGA+AGG - chr1_2:49675786-49675805 Msa0074760:intron 35.0%
GGTCCAAATAGTAAAGGATT+TGG - chr1_2:49675891-49675910 Msa0074760:CDS 35.0%
GTTTAGTAGTGACTCTCTAT+CGG + chr1_2:49676018-49676037 None:intergenic 35.0%
GATAGAGAGTCACTACTAAA+CGG - chr1_2:49676017-49676036 Msa0074760:intron 35.0%
AAAAAGGGACAACAAACTCT+TGG + chr1_2:49676268-49676287 None:intergenic 35.0%
!!! TCTGTTTGTTTTGCTGCAAA+AGG - chr1_2:49676319-49676338 Msa0074760:intron 35.0%
!!! AGGATGTCGATTTTGAATGT+CGG - chr1_2:49676339-49676358 Msa0074760:intron 35.0%
GAAGAAAAAAAACAACACCG+TGG - chr1_2:49676362-49676381 Msa0074760:intron 35.0%
! ATCCAACATTGAAGCTTTGT+CGG + chr1_2:49676675-49676694 None:intergenic 35.0%
TAAGAACACATGCAAACTAG+AGG + chr1_2:49676768-49676787 None:intergenic 35.0%
TGCTTATATTATAGGACGGA+GGG + chr1_2:49676990-49677009 None:intergenic 35.0%
TTGCTTATATTATAGGACGG+AGG + chr1_2:49676991-49677010 None:intergenic 35.0%
GATAAGTGTATTTAACCCTC+CGG - chr1_2:49677406-49677425 Msa0074760:intron 35.0%
!! ATTTTCATTGGTTGGTTGGT+GGG + chr1_2:49677600-49677619 None:intergenic 35.0%
TAATGTGGGTATAAGAGAGA+TGG + chr1_2:49677669-49677688 None:intergenic 35.0%
TCACGTGGCTAATGTTTATT+GGG - chr1_2:49677867-49677886 Msa0074760:intron 35.0%
! TAATGTTGGTTGGTTGAACA+AGG - chr1_2:49677952-49677971 Msa0074760:intron 35.0%
AGAAAGGGTTGTGTTAATTG+AGG + chr1_2:49678045-49678064 None:intergenic 35.0%
CTCAGAGACTTTATAAATGG+TGG + chr1_2:49678143-49678162 None:intergenic 35.0%
! CTGAGCTTCAAAACAGTTTT+AGG - chr1_2:49678158-49678177 Msa0074760:intron 35.0%
!!! AGCTTCAAAACAGTTTTAGG+AGG - chr1_2:49678161-49678180 Msa0074760:intron 35.0%
! GTACATGCTTTAAGTGCAAA+AGG - chr1_2:49678253-49678272 Msa0074760:intron 35.0%
! TGATACAAACTCATTGGCTA+TGG + chr1_2:49678286-49678305 None:intergenic 35.0%
AAAATGACAAAACACGACCA+TGG + chr1_2:49678429-49678448 None:intergenic 35.0%
TTTATGCAGATGATGTCCAT+GGG - chr1_2:49678471-49678490 Msa0074760:intron 35.0%
ATGATACCTATGATGTTTCC+TGG - chr1_2:49678501-49678520 Msa0074760:intron 35.0%
TGAATTCCAGGAAACATCAT+AGG + chr1_2:49678510-49678529 None:intergenic 35.0%
TGGAATTCAGCAATTTATGC+CGG - chr1_2:49678521-49678540 Msa0074760:intron 35.0%
ATATTAGGAAATGGCATCAC+TGG + chr1_2:49678606-49678625 None:intergenic 35.0%
GGAGAATTAGGCAACATATT+AGG + chr1_2:49678621-49678640 None:intergenic 35.0%
! TTGATTTTCTGCTTGCATTC+TGG + chr1_2:49678742-49678761 None:intergenic 35.0%
! TTTGGAATGCGTGATTGATT+TGG + chr1_2:49678801-49678820 None:intergenic 35.0%
! TGATTGTTGGACATCTTTTG+AGG - chr1_2:49678914-49678933 Msa0074760:CDS 35.0%
ATTGCATTAAGGGAAGAGTT+GGG + chr1_2:49679687-49679706 None:intergenic 35.0%
AATTGCATTAAGGGAAGAGT+TGG + chr1_2:49679688-49679707 None:intergenic 35.0%
GGAGCTAAGAATTGCATTAA+GGG + chr1_2:49679697-49679716 None:intergenic 35.0%
AGGAGCTAAGAATTGCATTA+AGG + chr1_2:49679698-49679717 None:intergenic 35.0%
TGAGGTTCTGTTTGCAAATT+TGG - chr1_2:49679867-49679886 Msa0074760:five_prime_UTR 35.0%
! CTGTTTGCAAATTTGGAATC+AGG - chr1_2:49679874-49679893 Msa0074760:five_prime_UTR 35.0%
!! AATCCAGAAAAGCATTAGTC+AGG - chr1_2:49679947-49679966 Msa0074760:five_prime_UTR 35.0%
! TTACCTGACTAATGCTTTTC+TGG + chr1_2:49679953-49679972 None:intergenic 35.0%
AGAACAGAGAGAGAGAGATA+AGG + chr1_2:49672310-49672329 None:intergenic 40.0%
! TTCTAAATTGGCGGTGGTTT+TGG + chr1_2:49672900-49672919 None:intergenic 40.0%
GATCGAATCTCTCTATGATC+AGG + chr1_2:49672967-49672986 None:intergenic 40.0%
AAGAAGATGAAATGGCATCG+TGG - chr1_2:49673028-49673047 Msa0074760:intron 40.0%
TGTTATACAAGCACAAGCCA+CGG - chr1_2:49673173-49673192 Msa0074760:intron 40.0%
GGTGAATAGAACACAGAAAC+CGG - chr1_2:49673287-49673306 Msa0074760:intron 40.0%
TAGAACACAGAAACCGGATA+TGG - chr1_2:49673293-49673312 Msa0074760:intron 40.0%
GTTCTATTCACCACCATATC+CGG + chr1_2:49673309-49673328 None:intergenic 40.0%
GTTCACTTCTCGCATTACTT+TGG + chr1_2:49673362-49673381 None:intergenic 40.0%
!! TACGTTTTTGCTGTCATGAC+CGG + chr1_2:49673453-49673472 None:intergenic 40.0%
!! CTCTGAAACTCAGATTCTTC+CGG + chr1_2:49673666-49673685 None:intergenic 40.0%
ACACACACTCACCACAAAAT+TGG + chr1_2:49673854-49673873 None:intergenic 40.0%
TGTATCTTCCTCTTTACACG+TGG + chr1_2:49673937-49673956 None:intergenic 40.0%
! CATGATTTGGATGAATGGAG+CGG - chr1_2:49673969-49673988 Msa0074760:intron 40.0%
AATACAGGAAGGAGGATGTT+TGG - chr1_2:49674947-49674966 Msa0074760:intron 40.0%
AATACAGGAAGGAGGATGTT+TGG - chr1_2:49674947-49674966 Msa0074760:intron 40.0%
!!! GGATGTTTGGTTTTGCACTA+TGG - chr1_2:49675006-49675025 Msa0074760:intron 40.0%
CTGAAACTCGTCGTATATGT+CGG + chr1_2:49675547-49675566 None:intergenic 40.0%
ACGACGAGTTTCAGTATGTT+TGG - chr1_2:49675553-49675572 Msa0074760:CDS 40.0%
TATGTTTGGATTCCAAGGAG+TGG - chr1_2:49675567-49675586 Msa0074760:CDS 40.0%
ATGTTTGGATTCCAAGGAGT+GGG - chr1_2:49675568-49675587 Msa0074760:CDS 40.0%
AGCAGATTTCATACGGTTTC+TGG + chr1_2:49675611-49675630 None:intergenic 40.0%
GAAACCGTATGAAATCTGCT+TGG - chr1_2:49675611-49675630 Msa0074760:intron 40.0%
TTCCCCGTTATTTGCACTTT+AGG + chr1_2:49675679-49675698 None:intergenic 40.0%
CACGACCCTATTTAACAAAC+AGG + chr1_2:49675711-49675730 None:intergenic 40.0%
! ACGATTCAGAGCAGCATTTT+TGG - chr1_2:49676136-49676155 Msa0074760:intron 40.0%
!!! GGATGTCGATTTTGAATGTC+GGG - chr1_2:49676340-49676359 Msa0074760:intron 40.0%
TCTTTGCAGATGTAGATCCA+CGG + chr1_2:49676382-49676401 None:intergenic 40.0%
AGGTTCATAATCTCTCAGAG+AGG - chr1_2:49676417-49676436 Msa0074760:intron 40.0%
GGTTCATAATCTCTCAGAGA+GGG - chr1_2:49676418-49676437 Msa0074760:intron 40.0%
CTTTGCAAGAACTTATACCG+CGG - chr1_2:49676552-49676571 Msa0074760:intron 40.0%
GGACTTGTCTAATAGTACAG+TGG + chr1_2:49676830-49676849 None:intergenic 40.0%
TGCTTATAATTGTGACCGGA+GGG + chr1_2:49677424-49677443 None:intergenic 40.0%
TTGCTTATAATTGTGACCGG+AGG + chr1_2:49677425-49677444 None:intergenic 40.0%
TGCTTATAATAGTGACCGGA+AGG - chr1_2:49677541-49677560 Msa0074760:intron 40.0%
!! CATTTTCATTGGTTGGTTGG+TGG + chr1_2:49677601-49677620 None:intergenic 40.0%
CACCAACCAACCAATGAAAA+TGG - chr1_2:49677599-49677618 Msa0074760:intron 40.0%
!! CTCCATTTTCATTGGTTGGT+TGG + chr1_2:49677604-49677623 None:intergenic 40.0%
ACCTTTGTTAGTGAGGTCAA+TGG - chr1_2:49677815-49677834 Msa0074760:intron 40.0%
ACCATTGACCTCACTAACAA+AGG + chr1_2:49677819-49677838 None:intergenic 40.0%
TGAGGTCAATGGTACTTTGT+GGG - chr1_2:49677826-49677845 Msa0074760:intron 40.0%
CTCACGTGGCTAATGTTTAT+TGG - chr1_2:49677866-49677885 Msa0074760:intron 40.0%
GTTATGTGGCTAATGTTGGT+TGG - chr1_2:49677942-49677961 Msa0074760:intron 40.0%
AACAATGCATCAAGTACCAG+TGG - chr1_2:49678071-49678090 Msa0074760:intron 40.0%
!!! TCTGTTCATGTTTTGACCAC+TGG + chr1_2:49678090-49678109 None:intergenic 40.0%
! ATGCTTTAAGTGCAAAAGGC+AGG - chr1_2:49678257-49678276 Msa0074760:intron 40.0%
! TGCTTTAAGTGCAAAAGGCA+GGG - chr1_2:49678258-49678277 Msa0074760:intron 40.0%
CTTTATGCAGATGATGTCCA+TGG - chr1_2:49678470-49678489 Msa0074760:intron 40.0%
GGCATAAATTGCTGAATTCC+AGG + chr1_2:49678522-49678541 None:intergenic 40.0%
ATGGGTTTAGGGATGGAAAT+CGG - chr1_2:49678564-49678583 Msa0074760:intron 40.0%
TTTAGGGATGGAAATCGGAA+TGG - chr1_2:49678569-49678588 Msa0074760:intron 40.0%
TTAGGGATGGAAATCGGAAT+GGG - chr1_2:49678570-49678589 Msa0074760:CDS 40.0%
GGTAAGGATCTGTGAAGTTT+GGG + chr1_2:49678824-49678843 None:intergenic 40.0%
TGGTAAGGATCTGTGAAGTT+TGG + chr1_2:49678825-49678844 None:intergenic 40.0%
TCCAACACCCTTCATCAATA+AGG - chr1_2:49679318-49679337 Msa0074760:CDS 40.0%
! TCCTTATTGATGAAGGGTGT+TGG + chr1_2:49679322-49679341 None:intergenic 40.0%
AACACCCTTCATCAATAAGG+AGG - chr1_2:49679321-49679340 Msa0074760:CDS 40.0%
CTCTCCTCCTTATTGATGAA+GGG + chr1_2:49679328-49679347 None:intergenic 40.0%
CTTCATCAATAAGGAGGAGA+GGG - chr1_2:49679327-49679346 Msa0074760:CDS 40.0%
TTCATCAATAAGGAGGAGAG+GGG - chr1_2:49679328-49679347 Msa0074760:CDS 40.0%
!!! TTAGAAAAGTGGTTTTGGGG+AGG - chr1_2:49679390-49679409 Msa0074760:CDS 40.0%
AGAACAGAGAGAGAGAGATA+AGG + chr1_2:49672310-49672329 None:intergenic 40.0%
! TTCTAAATTGGCGGTGGTTT+TGG + chr1_2:49672900-49672919 None:intergenic 40.0%
GATCGAATCTCTCTATGATC+AGG + chr1_2:49672967-49672986 None:intergenic 40.0%
AAGAAGATGAAATGGCATCG+TGG - chr1_2:49673028-49673047 Msa0074760:intron 40.0%
TGTTATACAAGCACAAGCCA+CGG - chr1_2:49673173-49673192 Msa0074760:intron 40.0%
GGTGAATAGAACACAGAAAC+CGG - chr1_2:49673287-49673306 Msa0074760:intron 40.0%
TAGAACACAGAAACCGGATA+TGG - chr1_2:49673293-49673312 Msa0074760:intron 40.0%
GTTCTATTCACCACCATATC+CGG + chr1_2:49673309-49673328 None:intergenic 40.0%
GTTCACTTCTCGCATTACTT+TGG + chr1_2:49673362-49673381 None:intergenic 40.0%
!! TACGTTTTTGCTGTCATGAC+CGG + chr1_2:49673453-49673472 None:intergenic 40.0%
!! CTCTGAAACTCAGATTCTTC+CGG + chr1_2:49673666-49673685 None:intergenic 40.0%
ACACACACTCACCACAAAAT+TGG + chr1_2:49673854-49673873 None:intergenic 40.0%
TGTATCTTCCTCTTTACACG+TGG + chr1_2:49673937-49673956 None:intergenic 40.0%
! CATGATTTGGATGAATGGAG+CGG - chr1_2:49673969-49673988 Msa0074760:intron 40.0%
AATACAGGAAGGAGGATGTT+TGG - chr1_2:49674947-49674966 Msa0074760:intron 40.0%
AATACAGGAAGGAGGATGTT+TGG - chr1_2:49674947-49674966 Msa0074760:intron 40.0%
!!! GGATGTTTGGTTTTGCACTA+TGG - chr1_2:49675006-49675025 Msa0074760:intron 40.0%
CTGAAACTCGTCGTATATGT+CGG + chr1_2:49675547-49675566 None:intergenic 40.0%
ACGACGAGTTTCAGTATGTT+TGG - chr1_2:49675553-49675572 Msa0074760:CDS 40.0%
TATGTTTGGATTCCAAGGAG+TGG - chr1_2:49675567-49675586 Msa0074760:CDS 40.0%
ATGTTTGGATTCCAAGGAGT+GGG - chr1_2:49675568-49675587 Msa0074760:CDS 40.0%
AGCAGATTTCATACGGTTTC+TGG + chr1_2:49675611-49675630 None:intergenic 40.0%
GAAACCGTATGAAATCTGCT+TGG - chr1_2:49675611-49675630 Msa0074760:intron 40.0%
TTCCCCGTTATTTGCACTTT+AGG + chr1_2:49675679-49675698 None:intergenic 40.0%
CACGACCCTATTTAACAAAC+AGG + chr1_2:49675711-49675730 None:intergenic 40.0%
! ACGATTCAGAGCAGCATTTT+TGG - chr1_2:49676136-49676155 Msa0074760:intron 40.0%
!!! GGATGTCGATTTTGAATGTC+GGG - chr1_2:49676340-49676359 Msa0074760:intron 40.0%
TCTTTGCAGATGTAGATCCA+CGG + chr1_2:49676382-49676401 None:intergenic 40.0%
AGGTTCATAATCTCTCAGAG+AGG - chr1_2:49676417-49676436 Msa0074760:intron 40.0%
GGTTCATAATCTCTCAGAGA+GGG - chr1_2:49676418-49676437 Msa0074760:intron 40.0%
CTTTGCAAGAACTTATACCG+CGG - chr1_2:49676552-49676571 Msa0074760:intron 40.0%
GGACTTGTCTAATAGTACAG+TGG + chr1_2:49676830-49676849 None:intergenic 40.0%
TGCTTATAATTGTGACCGGA+GGG + chr1_2:49677424-49677443 None:intergenic 40.0%
TTGCTTATAATTGTGACCGG+AGG + chr1_2:49677425-49677444 None:intergenic 40.0%
TGCTTATAATAGTGACCGGA+AGG - chr1_2:49677541-49677560 Msa0074760:intron 40.0%
!! CATTTTCATTGGTTGGTTGG+TGG + chr1_2:49677601-49677620 None:intergenic 40.0%
CACCAACCAACCAATGAAAA+TGG - chr1_2:49677599-49677618 Msa0074760:intron 40.0%
!! CTCCATTTTCATTGGTTGGT+TGG + chr1_2:49677604-49677623 None:intergenic 40.0%
ACCTTTGTTAGTGAGGTCAA+TGG - chr1_2:49677815-49677834 Msa0074760:intron 40.0%
ACCATTGACCTCACTAACAA+AGG + chr1_2:49677819-49677838 None:intergenic 40.0%
TGAGGTCAATGGTACTTTGT+GGG - chr1_2:49677826-49677845 Msa0074760:intron 40.0%
CTCACGTGGCTAATGTTTAT+TGG - chr1_2:49677866-49677885 Msa0074760:intron 40.0%
GTTATGTGGCTAATGTTGGT+TGG - chr1_2:49677942-49677961 Msa0074760:intron 40.0%
AACAATGCATCAAGTACCAG+TGG - chr1_2:49678071-49678090 Msa0074760:intron 40.0%
!!! TCTGTTCATGTTTTGACCAC+TGG + chr1_2:49678090-49678109 None:intergenic 40.0%
! ATGCTTTAAGTGCAAAAGGC+AGG - chr1_2:49678257-49678276 Msa0074760:intron 40.0%
! TGCTTTAAGTGCAAAAGGCA+GGG - chr1_2:49678258-49678277 Msa0074760:intron 40.0%
CTTTATGCAGATGATGTCCA+TGG - chr1_2:49678470-49678489 Msa0074760:intron 40.0%
GGCATAAATTGCTGAATTCC+AGG + chr1_2:49678522-49678541 None:intergenic 40.0%
ATGGGTTTAGGGATGGAAAT+CGG - chr1_2:49678564-49678583 Msa0074760:intron 40.0%
TTTAGGGATGGAAATCGGAA+TGG - chr1_2:49678569-49678588 Msa0074760:intron 40.0%
TTAGGGATGGAAATCGGAAT+GGG - chr1_2:49678570-49678589 Msa0074760:CDS 40.0%
GGTAAGGATCTGTGAAGTTT+GGG + chr1_2:49678824-49678843 None:intergenic 40.0%
TGGTAAGGATCTGTGAAGTT+TGG + chr1_2:49678825-49678844 None:intergenic 40.0%
TCCAACACCCTTCATCAATA+AGG - chr1_2:49679318-49679337 Msa0074760:CDS 40.0%
! TCCTTATTGATGAAGGGTGT+TGG + chr1_2:49679322-49679341 None:intergenic 40.0%
AACACCCTTCATCAATAAGG+AGG - chr1_2:49679321-49679340 Msa0074760:CDS 40.0%
CTCTCCTCCTTATTGATGAA+GGG + chr1_2:49679328-49679347 None:intergenic 40.0%
CTTCATCAATAAGGAGGAGA+GGG - chr1_2:49679327-49679346 Msa0074760:CDS 40.0%
TTCATCAATAAGGAGGAGAG+GGG - chr1_2:49679328-49679347 Msa0074760:CDS 40.0%
!!! TTAGAAAAGTGGTTTTGGGG+AGG - chr1_2:49679390-49679409 Msa0074760:CDS 40.0%
TAGATTGGAAGAGTGAGTGG+TGG + chr1_2:49672380-49672399 None:intergenic 45.0%
GCAACAAGACGATGAGATCA+TGG - chr1_2:49672837-49672856 Msa0074760:intron 45.0%
! ACGGTTTTCTAAATTGGCGG+TGG + chr1_2:49672906-49672925 None:intergenic 45.0%
! CCGACGGTTTTCTAAATTGG+CGG + chr1_2:49672909-49672928 None:intergenic 45.0%
CCGCCAATTTAGAAAACCGT+CGG - chr1_2:49672906-49672925 Msa0074760:intron 45.0%
!! GTGCCGACGGTTTTCTAAAT+TGG + chr1_2:49672912-49672931 None:intergenic 45.0%
ATTTAGAAAACCGTCGGCAC+CGG - chr1_2:49672912-49672931 Msa0074760:intron 45.0%
AAATCGTGACGGTTGAAAGG+AGG + chr1_2:49673084-49673103 None:intergenic 45.0%
CTGAAATCGTGACGGTTGAA+AGG + chr1_2:49673087-49673106 None:intergenic 45.0%
! AACGTGAGTCGGAGTTTGTT+CGG - chr1_2:49673196-49673215 Msa0074760:intron 45.0%
GTTCTATTCACCACCATCTC+CGG + chr1_2:49673279-49673298 None:intergenic 45.0%
AACACAGAAACCGGATATGG+TGG - chr1_2:49673296-49673315 Msa0074760:intron 45.0%
AGTAATGCGAGAAGTGAACC+AGG - chr1_2:49673363-49673382 Msa0074760:intron 45.0%
! TTCGAGTTCGATGATTGCAG+CGG - chr1_2:49673392-49673411 Msa0074760:CDS 45.0%
GGTAGATTCATGTGATACGC+CGG - chr1_2:49673431-49673450 Msa0074760:CDS 45.0%
GTACGCTGCTTCGAGATTAT+CGG - chr1_2:49673470-49673489 Msa0074760:CDS 45.0%
CGAGATTATCGGAAACGATC+AGG - chr1_2:49673481-49673500 Msa0074760:CDS 45.0%
! TGAACCGGTTCATAGAGAAC+CGG - chr1_2:49673611-49673630 Msa0074760:CDS 45.0%
AACTCCGGTTCTCTATGAAC+CGG + chr1_2:49673618-49673637 None:intergenic 45.0%
AGAATCTGAGTTTCAGAGCG+AGG - chr1_2:49673668-49673687 Msa0074760:CDS 45.0%
TCATCAGCGCACAATAGACA+AGG + chr1_2:49673757-49673776 None:intergenic 45.0%
GAATTGTGCCACGTGTAAAG+AGG - chr1_2:49673926-49673945 Msa0074760:intron 45.0%
TAGAGGTGAATACAGGAAGG+AGG - chr1_2:49674939-49674958 Msa0074760:intron 45.0%
GGTGGTGACACTCTATATAG+AGG - chr1_2:49674968-49674987 Msa0074760:intron 45.0%
TAGAGGTGAATACAGGAAGG+AGG - chr1_2:49674939-49674958 Msa0074760:intron 45.0%
AAACCCTATGTGACTTGACG+CGG - chr1_2:49675467-49675486 Msa0074760:intron 45.0%
ATTATGAACCTCTGCAGCAC+GGG + chr1_2:49676408-49676427 None:intergenic 45.0%
GATTATGAACCTCTGCAGCA+CGG + chr1_2:49676409-49676428 None:intergenic 45.0%
GTCCGACAAAGCTTCAATGT+TGG - chr1_2:49676670-49676689 Msa0074760:intron 45.0%
GTCATTGCAGTTACAAGTGC+AGG - chr1_2:49676715-49676734 Msa0074760:intron 45.0%
GTGAGGTCAATGGTACTTTG+TGG - chr1_2:49677825-49677844 Msa0074760:intron 45.0%
!! CACGTGAGTACATTTTCAGG+TGG + chr1_2:49677854-49677873 None:intergenic 45.0%
CACCTGAAAATGTACTCACG+TGG - chr1_2:49677852-49677871 Msa0074760:intron 45.0%
! AGCCACGTGAGTACATTTTC+AGG + chr1_2:49677857-49677876 None:intergenic 45.0%
CGTGGCTAATGTTTATTGGG+TGG - chr1_2:49677870-49677889 Msa0074760:intron 45.0%
ATGCTTGCATCAACTTCTGG+TGG - chr1_2:49677976-49677995 Msa0074760:intron 45.0%
ATAGCGAACCTTGGTCCAAA+AGG + chr1_2:49678672-49678691 None:intergenic 45.0%
GCTTGCATTCTGGATGAATC+AGG + chr1_2:49678732-49678751 None:intergenic 45.0%
!! GGAATGCGTGATTGATTTGG+AGG + chr1_2:49678798-49678817 None:intergenic 45.0%
! GGATCTGTGAAGTTTGGGTT+TGG + chr1_2:49678819-49678838 None:intergenic 45.0%
GATCCTTACCAGCAATACCT+CGG - chr1_2:49678834-49678853 Msa0074760:CDS 45.0%
ATTAATTGCTGCACCTGGTG+GGG + chr1_2:49678861-49678880 None:intergenic 45.0%
CATTAATTGCTGCACCTGGT+GGG + chr1_2:49678862-49678881 None:intergenic 45.0%
ATGGATCCAAGGTGAAATGC+AGG + chr1_2:49678976-49678995 None:intergenic 45.0%
TTAAGATCGGACGGAGTATG+TGG + chr1_2:49679153-49679172 None:intergenic 45.0%
CCTCTCCTCCTTATTGATGA+AGG + chr1_2:49679329-49679348 None:intergenic 45.0%
CCTTCATCAATAAGGAGGAG+AGG - chr1_2:49679326-49679345 Msa0074760:CDS 45.0%
GGAGAGGGGAGAATATCTTT+AGG - chr1_2:49679342-49679361 Msa0074760:CDS 45.0%
!! GACAATGCACGAAGCATTGA+AGG - chr1_2:49679461-49679480 Msa0074760:intron 45.0%
AGCACACGACACAGTAATAG+CGG + chr1_2:49679558-49679577 None:intergenic 45.0%
!!! GGTGGGTGACATTTTGACTT+TGG - chr1_2:49679766-49679785 Msa0074760:five_prime_UTR 45.0%
! CTGGTCTGTTGACATTTTGC+TGG + chr1_2:49679907-49679926 None:intergenic 45.0%
CAGCAAAATGTCAACAGACC+AGG - chr1_2:49679905-49679924 Msa0074760:five_prime_UTR 45.0%
TAGATTGGAAGAGTGAGTGG+TGG + chr1_2:49672380-49672399 None:intergenic 45.0%
GCAACAAGACGATGAGATCA+TGG - chr1_2:49672837-49672856 Msa0074760:intron 45.0%
! ACGGTTTTCTAAATTGGCGG+TGG + chr1_2:49672906-49672925 None:intergenic 45.0%
! CCGACGGTTTTCTAAATTGG+CGG + chr1_2:49672909-49672928 None:intergenic 45.0%
CCGCCAATTTAGAAAACCGT+CGG - chr1_2:49672906-49672925 Msa0074760:intron 45.0%
!! GTGCCGACGGTTTTCTAAAT+TGG + chr1_2:49672912-49672931 None:intergenic 45.0%
ATTTAGAAAACCGTCGGCAC+CGG - chr1_2:49672912-49672931 Msa0074760:intron 45.0%
AAATCGTGACGGTTGAAAGG+AGG + chr1_2:49673084-49673103 None:intergenic 45.0%
CTGAAATCGTGACGGTTGAA+AGG + chr1_2:49673087-49673106 None:intergenic 45.0%
! AACGTGAGTCGGAGTTTGTT+CGG - chr1_2:49673196-49673215 Msa0074760:intron 45.0%
GTTCTATTCACCACCATCTC+CGG + chr1_2:49673279-49673298 None:intergenic 45.0%
AACACAGAAACCGGATATGG+TGG - chr1_2:49673296-49673315 Msa0074760:intron 45.0%
AGTAATGCGAGAAGTGAACC+AGG - chr1_2:49673363-49673382 Msa0074760:intron 45.0%
! TTCGAGTTCGATGATTGCAG+CGG - chr1_2:49673392-49673411 Msa0074760:CDS 45.0%
GGTAGATTCATGTGATACGC+CGG - chr1_2:49673431-49673450 Msa0074760:CDS 45.0%
GTACGCTGCTTCGAGATTAT+CGG - chr1_2:49673470-49673489 Msa0074760:CDS 45.0%
CGAGATTATCGGAAACGATC+AGG - chr1_2:49673481-49673500 Msa0074760:CDS 45.0%
! TGAACCGGTTCATAGAGAAC+CGG - chr1_2:49673611-49673630 Msa0074760:CDS 45.0%
AACTCCGGTTCTCTATGAAC+CGG + chr1_2:49673618-49673637 None:intergenic 45.0%
AGAATCTGAGTTTCAGAGCG+AGG - chr1_2:49673668-49673687 Msa0074760:CDS 45.0%
TCATCAGCGCACAATAGACA+AGG + chr1_2:49673757-49673776 None:intergenic 45.0%
GAATTGTGCCACGTGTAAAG+AGG - chr1_2:49673926-49673945 Msa0074760:intron 45.0%
TAGAGGTGAATACAGGAAGG+AGG - chr1_2:49674939-49674958 Msa0074760:intron 45.0%
GGTGGTGACACTCTATATAG+AGG - chr1_2:49674968-49674987 Msa0074760:intron 45.0%
TAGAGGTGAATACAGGAAGG+AGG - chr1_2:49674939-49674958 Msa0074760:intron 45.0%
AAACCCTATGTGACTTGACG+CGG - chr1_2:49675467-49675486 Msa0074760:intron 45.0%
ATTATGAACCTCTGCAGCAC+GGG + chr1_2:49676408-49676427 None:intergenic 45.0%
GATTATGAACCTCTGCAGCA+CGG + chr1_2:49676409-49676428 None:intergenic 45.0%
GTCCGACAAAGCTTCAATGT+TGG - chr1_2:49676670-49676689 Msa0074760:intron 45.0%
GTCATTGCAGTTACAAGTGC+AGG - chr1_2:49676715-49676734 Msa0074760:intron 45.0%
GTGAGGTCAATGGTACTTTG+TGG - chr1_2:49677825-49677844 Msa0074760:intron 45.0%
!! CACGTGAGTACATTTTCAGG+TGG + chr1_2:49677854-49677873 None:intergenic 45.0%
CACCTGAAAATGTACTCACG+TGG - chr1_2:49677852-49677871 Msa0074760:intron 45.0%
! AGCCACGTGAGTACATTTTC+AGG + chr1_2:49677857-49677876 None:intergenic 45.0%
CGTGGCTAATGTTTATTGGG+TGG - chr1_2:49677870-49677889 Msa0074760:intron 45.0%
ATGCTTGCATCAACTTCTGG+TGG - chr1_2:49677976-49677995 Msa0074760:intron 45.0%
ATAGCGAACCTTGGTCCAAA+AGG + chr1_2:49678672-49678691 None:intergenic 45.0%
GCTTGCATTCTGGATGAATC+AGG + chr1_2:49678732-49678751 None:intergenic 45.0%
!! GGAATGCGTGATTGATTTGG+AGG + chr1_2:49678798-49678817 None:intergenic 45.0%
! GGATCTGTGAAGTTTGGGTT+TGG + chr1_2:49678819-49678838 None:intergenic 45.0%
GATCCTTACCAGCAATACCT+CGG - chr1_2:49678834-49678853 Msa0074760:CDS 45.0%
ATTAATTGCTGCACCTGGTG+GGG + chr1_2:49678861-49678880 None:intergenic 45.0%
CATTAATTGCTGCACCTGGT+GGG + chr1_2:49678862-49678881 None:intergenic 45.0%
ATGGATCCAAGGTGAAATGC+AGG + chr1_2:49678976-49678995 None:intergenic 45.0%
TTAAGATCGGACGGAGTATG+TGG + chr1_2:49679153-49679172 None:intergenic 45.0%
CCTCTCCTCCTTATTGATGA+AGG + chr1_2:49679329-49679348 None:intergenic 45.0%
CCTTCATCAATAAGGAGGAG+AGG - chr1_2:49679326-49679345 Msa0074760:CDS 45.0%
GGAGAGGGGAGAATATCTTT+AGG - chr1_2:49679342-49679361 Msa0074760:CDS 45.0%
!! GACAATGCACGAAGCATTGA+AGG - chr1_2:49679461-49679480 Msa0074760:intron 45.0%
AGCACACGACACAGTAATAG+CGG + chr1_2:49679558-49679577 None:intergenic 45.0%
!!! GGTGGGTGACATTTTGACTT+TGG - chr1_2:49679766-49679785 Msa0074760:five_prime_UTR 45.0%
! CTGGTCTGTTGACATTTTGC+TGG + chr1_2:49679907-49679926 None:intergenic 45.0%
CAGCAAAATGTCAACAGACC+AGG - chr1_2:49679905-49679924 Msa0074760:five_prime_UTR 45.0%
!!! ACAAAATTATTTTTTATTAT+TGG - chr1_2:49674342-49674361 Msa0074760:intron 5.0%
!! ATTATATTGATATTATAAAA+TGG - chr1_2:49677567-49677586 Msa0074760:intron 5.0%
!!! ACAAAATTATTTTTTATTAT+TGG - chr1_2:49674342-49674361 Msa0074760:intron 5.0%
!! ATTATATTGATATTATAAAA+TGG - chr1_2:49677567-49677586 Msa0074760:intron 5.0%
ATGATCAGGAATCACGCGAC+TGG + chr1_2:49672953-49672972 None:intergenic 50.0%
GTTTGTTCGGCAAACGAGAC+CGG - chr1_2:49673209-49673228 Msa0074760:intron 50.0%
ATCGAACTCGAAGATGCACC+TGG + chr1_2:49673384-49673403 None:intergenic 50.0%
GGTTCATAGAGAACCGGAGT+TGG - chr1_2:49673617-49673636 Msa0074760:CDS 50.0%
ATAGAGAACCGGAGTTGGAC+CGG - chr1_2:49673622-49673641 Msa0074760:CDS 50.0%
! TTCCTTTTCCGGTCCAACTC+CGG + chr1_2:49673633-49673652 None:intergenic 50.0%
GAGTTGGACCGGAAAAGGAA+GGG - chr1_2:49673633-49673652 Msa0074760:CDS 50.0%
! GTTCACGTCCCTTCCTTTTC+CGG + chr1_2:49673644-49673663 None:intergenic 50.0%
GAAAAGGAAGGGACGTGAAC+CGG - chr1_2:49673644-49673663 Msa0074760:CDS 50.0%
GGTGAGTGTGTGTGTCACAT+AGG - chr1_2:49673861-49673880 Msa0074760:intron 50.0%
ACAGGAAGGAGGATGTTTGG+TGG - chr1_2:49674950-49674969 Msa0074760:intron 50.0%
CTTCCGCGTCAAGTCACATA+GGG + chr1_2:49675473-49675492 None:intergenic 50.0%
TCTTCCGCGTCAAGTCACAT+AGG + chr1_2:49675474-49675493 None:intergenic 50.0%
ACTTATACCGCGGTGCAACA+AGG - chr1_2:49676562-49676581 Msa0074760:intron 50.0%
TGTTTCACCTTGTTGCACCG+CGG + chr1_2:49676572-49676591 None:intergenic 50.0%
GGCATGCTTGCATCAACTTC+TGG - chr1_2:49677973-49677992 Msa0074760:intron 50.0%
GGGTTGTGTTAATTGAGGCG+AGG + chr1_2:49678040-49678059 None:intergenic 50.0%
CAGATGATGTCCATGGGATG+TGG - chr1_2:49678477-49678496 Msa0074760:intron 50.0%
AGGTATCATGCCACATCCCA+TGG + chr1_2:49678490-49678509 None:intergenic 50.0%
TCAGCAATTTATGCCGGCGA+TGG - chr1_2:49678527-49678546 Msa0074760:intron 50.0%
CAGCAATTTATGCCGGCGAT+GGG - chr1_2:49678528-49678547 Msa0074760:intron 50.0%
ATTTATGCCGGCGATGGGAA+TGG - chr1_2:49678533-49678552 Msa0074760:intron 50.0%
TTTATGCCGGCGATGGGAAT+GGG - chr1_2:49678534-49678553 Msa0074760:intron 50.0%
ATGGGAATGGGGATGGGAAT+GGG - chr1_2:49678546-49678565 Msa0074760:intron 50.0%
! ATGGGGATGGGAATGGGTTT+AGG - chr1_2:49678552-49678571 Msa0074760:intron 50.0%
! TGGGGATGGGAATGGGTTTA+GGG - chr1_2:49678553-49678572 Msa0074760:intron 50.0%
! GATGGGAATGGGTTTAGGGA+TGG - chr1_2:49678557-49678576 Msa0074760:intron 50.0%
GCTGCTGGCAAAGGAGAATT+AGG + chr1_2:49678633-49678652 None:intergenic 50.0%
! GCAACTGTAGCTGGTCCTTT+TGG - chr1_2:49678654-49678673 Msa0074760:CDS 50.0%
! TAGCTGGTCCTTTTGGACCA+AGG - chr1_2:49678661-49678680 Msa0074760:CDS 50.0%
! AAAGGAGGCATAGCGAACCT+TGG + chr1_2:49678681-49678700 None:intergenic 50.0%
ACATGGGGCATATGGAAAGG+AGG + chr1_2:49678696-49678715 None:intergenic 50.0%
GGAACATGGGGCATATGGAA+AGG + chr1_2:49678699-49678718 None:intergenic 50.0%
! AGAGCACCAAGGGAGTTAAG+GGG + chr1_2:49678774-49678793 None:intergenic 50.0%
! CAGAGCACCAAGGGAGTTAA+GGG + chr1_2:49678775-49678794 None:intergenic 50.0%
! ATTTGGAGGCAGAGCACCAA+GGG + chr1_2:49678784-49678803 None:intergenic 50.0%
GCATTAATTGCTGCACCTGG+TGG + chr1_2:49678863-49678882 None:intergenic 50.0%
CCTGCATTAATTGCTGCACC+TGG + chr1_2:49678866-49678885 None:intergenic 50.0%
CCAGGTGCAGCAATTAATGC+AGG - chr1_2:49678863-49678882 Msa0074760:CDS 50.0%
AAATGCAGGTGGCAGGAATC+TGG + chr1_2:49678962-49678981 None:intergenic 50.0%
GATCCAAGGTGAAATGCAGG+TGG + chr1_2:49678973-49678992 None:intergenic 50.0%
GCATTAAGGGAAGAGTTGGG+AGG + chr1_2:49679684-49679703 None:intergenic 50.0%
TCAACAGACCAGGTACCAGT+GGG - chr1_2:49679915-49679934 Msa0074760:five_prime_UTR 50.0%
TGGATTATCTTGGCTCCCAC+TGG + chr1_2:49679933-49679952 None:intergenic 50.0%
ATGATCAGGAATCACGCGAC+TGG + chr1_2:49672953-49672972 None:intergenic 50.0%
GTTTGTTCGGCAAACGAGAC+CGG - chr1_2:49673209-49673228 Msa0074760:intron 50.0%
ATCGAACTCGAAGATGCACC+TGG + chr1_2:49673384-49673403 None:intergenic 50.0%
GGTTCATAGAGAACCGGAGT+TGG - chr1_2:49673617-49673636 Msa0074760:CDS 50.0%
ATAGAGAACCGGAGTTGGAC+CGG - chr1_2:49673622-49673641 Msa0074760:CDS 50.0%
! TTCCTTTTCCGGTCCAACTC+CGG + chr1_2:49673633-49673652 None:intergenic 50.0%
GAGTTGGACCGGAAAAGGAA+GGG - chr1_2:49673633-49673652 Msa0074760:CDS 50.0%
! GTTCACGTCCCTTCCTTTTC+CGG + chr1_2:49673644-49673663 None:intergenic 50.0%
GAAAAGGAAGGGACGTGAAC+CGG - chr1_2:49673644-49673663 Msa0074760:CDS 50.0%
GGTGAGTGTGTGTGTCACAT+AGG - chr1_2:49673861-49673880 Msa0074760:intron 50.0%
ACAGGAAGGAGGATGTTTGG+TGG - chr1_2:49674950-49674969 Msa0074760:intron 50.0%
CTTCCGCGTCAAGTCACATA+GGG + chr1_2:49675473-49675492 None:intergenic 50.0%
TCTTCCGCGTCAAGTCACAT+AGG + chr1_2:49675474-49675493 None:intergenic 50.0%
ACTTATACCGCGGTGCAACA+AGG - chr1_2:49676562-49676581 Msa0074760:intron 50.0%
TGTTTCACCTTGTTGCACCG+CGG + chr1_2:49676572-49676591 None:intergenic 50.0%
GGCATGCTTGCATCAACTTC+TGG - chr1_2:49677973-49677992 Msa0074760:intron 50.0%
GGGTTGTGTTAATTGAGGCG+AGG + chr1_2:49678040-49678059 None:intergenic 50.0%
CAGATGATGTCCATGGGATG+TGG - chr1_2:49678477-49678496 Msa0074760:intron 50.0%
AGGTATCATGCCACATCCCA+TGG + chr1_2:49678490-49678509 None:intergenic 50.0%
TCAGCAATTTATGCCGGCGA+TGG - chr1_2:49678527-49678546 Msa0074760:intron 50.0%
CAGCAATTTATGCCGGCGAT+GGG - chr1_2:49678528-49678547 Msa0074760:intron 50.0%
ATTTATGCCGGCGATGGGAA+TGG - chr1_2:49678533-49678552 Msa0074760:intron 50.0%
TTTATGCCGGCGATGGGAAT+GGG - chr1_2:49678534-49678553 Msa0074760:intron 50.0%
ATGGGAATGGGGATGGGAAT+GGG - chr1_2:49678546-49678565 Msa0074760:intron 50.0%
! ATGGGGATGGGAATGGGTTT+AGG - chr1_2:49678552-49678571 Msa0074760:intron 50.0%
! TGGGGATGGGAATGGGTTTA+GGG - chr1_2:49678553-49678572 Msa0074760:intron 50.0%
! GATGGGAATGGGTTTAGGGA+TGG - chr1_2:49678557-49678576 Msa0074760:intron 50.0%
GCTGCTGGCAAAGGAGAATT+AGG + chr1_2:49678633-49678652 None:intergenic 50.0%
! GCAACTGTAGCTGGTCCTTT+TGG - chr1_2:49678654-49678673 Msa0074760:CDS 50.0%
! TAGCTGGTCCTTTTGGACCA+AGG - chr1_2:49678661-49678680 Msa0074760:CDS 50.0%
! AAAGGAGGCATAGCGAACCT+TGG + chr1_2:49678681-49678700 None:intergenic 50.0%
ACATGGGGCATATGGAAAGG+AGG + chr1_2:49678696-49678715 None:intergenic 50.0%
GGAACATGGGGCATATGGAA+AGG + chr1_2:49678699-49678718 None:intergenic 50.0%
! AGAGCACCAAGGGAGTTAAG+GGG + chr1_2:49678774-49678793 None:intergenic 50.0%
! CAGAGCACCAAGGGAGTTAA+GGG + chr1_2:49678775-49678794 None:intergenic 50.0%
! ATTTGGAGGCAGAGCACCAA+GGG + chr1_2:49678784-49678803 None:intergenic 50.0%
GCATTAATTGCTGCACCTGG+TGG + chr1_2:49678863-49678882 None:intergenic 50.0%
CCTGCATTAATTGCTGCACC+TGG + chr1_2:49678866-49678885 None:intergenic 50.0%
CCAGGTGCAGCAATTAATGC+AGG - chr1_2:49678863-49678882 Msa0074760:CDS 50.0%
AAATGCAGGTGGCAGGAATC+TGG + chr1_2:49678962-49678981 None:intergenic 50.0%
GATCCAAGGTGAAATGCAGG+TGG + chr1_2:49678973-49678992 None:intergenic 50.0%
GCATTAAGGGAAGAGTTGGG+AGG + chr1_2:49679684-49679703 None:intergenic 50.0%
TCAACAGACCAGGTACCAGT+GGG - chr1_2:49679915-49679934 Msa0074760:five_prime_UTR 50.0%
TGGATTATCTTGGCTCCCAC+TGG + chr1_2:49679933-49679952 None:intergenic 50.0%
ATCAGGAATCACGCGACTGG+CGG + chr1_2:49672950-49672969 None:intergenic 55.0%
! CATTCATCAGTCGGAAGCGC+CGG - chr1_2:49673123-49673142 Msa0074760:intron 55.0%
ACAAGCCACGGAACGTGAGT+CGG - chr1_2:49673185-49673204 Msa0074760:intron 55.0%
AAACTCCGACTCACGTTCCG+TGG + chr1_2:49673193-49673212 None:intergenic 55.0%
TTCTCGGCCTCCGATTCATC+CGG - chr1_2:49673245-49673264 Msa0074760:intron 55.0%
GGTTTCCTCGCCGGATGAAT+CGG + chr1_2:49673258-49673277 None:intergenic 55.0%
GATTCATCCGGCGAGGAAAC+CGG - chr1_2:49673257-49673276 Msa0074760:intron 55.0%
TGCAGCGGCAAGAGAATCGA+CGG - chr1_2:49673407-49673426 Msa0074760:CDS 55.0%
TGTGAGCACCACCGGAAAAG+CGG - chr1_2:49673533-49673552 Msa0074760:CDS 55.0%
ATGACAGTTACGTCGTCGCC+TGG - chr1_2:49673570-49673589 Msa0074760:CDS 55.0%
TCGTCGCCTGGTTGTTCTAG+CGG - chr1_2:49673582-49673601 Msa0074760:CDS 55.0%
!! TTCTAGCGGGAGTGCTGAAC+CGG - chr1_2:49673596-49673615 Msa0074760:CDS 55.0%
AACCGGAGTTGGACCGGAAA+AGG - chr1_2:49673628-49673647 Msa0074760:CDS 55.0%
GGAGTTGGACCGGAAAAGGA+AGG - chr1_2:49673632-49673651 Msa0074760:CDS 55.0%
TGGATGAATGGAGCGGCTTG+TGG - chr1_2:49673976-49673995 Msa0074760:intron 55.0%
AAAGAGATCCCGTGCTGCAG+AGG - chr1_2:49676397-49676416 Msa0074760:intron 55.0%
TTATGCCGGCGATGGGAATG+GGG - chr1_2:49678535-49678554 Msa0074760:intron 55.0%
GATGGGAATGGGGATGGGAA+TGG - chr1_2:49678545-49678564 Msa0074760:intron 55.0%
ACAGTTGCTGCTGCTGGCAA+AGG + chr1_2:49678642-49678661 None:intergenic 55.0%
CTGCAGGAACATGGGGCATA+TGG + chr1_2:49678704-49678723 None:intergenic 55.0%
AGGTGCAGCTGCAGGAACAT+GGG + chr1_2:49678712-49678731 None:intergenic 55.0%
GATGAATCAGGTGCAGCTGC+AGG + chr1_2:49678720-49678739 None:intergenic 55.0%
GACAACCCCCTTAACTCCCT+TGG - chr1_2:49678765-49678784 Msa0074760:CDS 55.0%
GAGCACCAAGGGAGTTAAGG+GGG + chr1_2:49678773-49678792 None:intergenic 55.0%
! GCAGAGCACCAAGGGAGTTA+AGG + chr1_2:49678776-49678795 None:intergenic 55.0%
! GATTTGGAGGCAGAGCACCA+AGG + chr1_2:49678785-49678804 None:intergenic 55.0%
!! GGACCGAGGTATTGCTGGTA+AGG + chr1_2:49678840-49678859 None:intergenic 55.0%
CAAGGTGAAATGCAGGTGGC+AGG + chr1_2:49678969-49678988 None:intergenic 55.0%
CTGCCACCTGCATTTCACCT+TGG - chr1_2:49678967-49678986 Msa0074760:CDS 55.0%
!! CACGAAGCATTGAAGGCCGT+TGG - chr1_2:49679468-49679487 Msa0074760:intron 55.0%
GTCAACAGACCAGGTACCAG+TGG - chr1_2:49679914-49679933 Msa0074760:five_prime_UTR 55.0%
ATCAGGAATCACGCGACTGG+CGG + chr1_2:49672950-49672969 None:intergenic 55.0%
! CATTCATCAGTCGGAAGCGC+CGG - chr1_2:49673123-49673142 Msa0074760:intron 55.0%
ACAAGCCACGGAACGTGAGT+CGG - chr1_2:49673185-49673204 Msa0074760:intron 55.0%
AAACTCCGACTCACGTTCCG+TGG + chr1_2:49673193-49673212 None:intergenic 55.0%
TTCTCGGCCTCCGATTCATC+CGG - chr1_2:49673245-49673264 Msa0074760:intron 55.0%
GGTTTCCTCGCCGGATGAAT+CGG + chr1_2:49673258-49673277 None:intergenic 55.0%
GATTCATCCGGCGAGGAAAC+CGG - chr1_2:49673257-49673276 Msa0074760:intron 55.0%
TGCAGCGGCAAGAGAATCGA+CGG - chr1_2:49673407-49673426 Msa0074760:CDS 55.0%
TGTGAGCACCACCGGAAAAG+CGG - chr1_2:49673533-49673552 Msa0074760:CDS 55.0%
ATGACAGTTACGTCGTCGCC+TGG - chr1_2:49673570-49673589 Msa0074760:CDS 55.0%
TCGTCGCCTGGTTGTTCTAG+CGG - chr1_2:49673582-49673601 Msa0074760:CDS 55.0%
!! TTCTAGCGGGAGTGCTGAAC+CGG - chr1_2:49673596-49673615 Msa0074760:CDS 55.0%
AACCGGAGTTGGACCGGAAA+AGG - chr1_2:49673628-49673647 Msa0074760:CDS 55.0%
GGAGTTGGACCGGAAAAGGA+AGG - chr1_2:49673632-49673651 Msa0074760:CDS 55.0%
TGGATGAATGGAGCGGCTTG+TGG - chr1_2:49673976-49673995 Msa0074760:intron 55.0%
AAAGAGATCCCGTGCTGCAG+AGG - chr1_2:49676397-49676416 Msa0074760:intron 55.0%
TTATGCCGGCGATGGGAATG+GGG - chr1_2:49678535-49678554 Msa0074760:intron 55.0%
GATGGGAATGGGGATGGGAA+TGG - chr1_2:49678545-49678564 Msa0074760:intron 55.0%
ACAGTTGCTGCTGCTGGCAA+AGG + chr1_2:49678642-49678661 None:intergenic 55.0%
CTGCAGGAACATGGGGCATA+TGG + chr1_2:49678704-49678723 None:intergenic 55.0%
AGGTGCAGCTGCAGGAACAT+GGG + chr1_2:49678712-49678731 None:intergenic 55.0%
GATGAATCAGGTGCAGCTGC+AGG + chr1_2:49678720-49678739 None:intergenic 55.0%
GACAACCCCCTTAACTCCCT+TGG - chr1_2:49678765-49678784 Msa0074760:CDS 55.0%
GAGCACCAAGGGAGTTAAGG+GGG + chr1_2:49678773-49678792 None:intergenic 55.0%
! GCAGAGCACCAAGGGAGTTA+AGG + chr1_2:49678776-49678795 None:intergenic 55.0%
! GATTTGGAGGCAGAGCACCA+AGG + chr1_2:49678785-49678804 None:intergenic 55.0%
!! GGACCGAGGTATTGCTGGTA+AGG + chr1_2:49678840-49678859 None:intergenic 55.0%
CAAGGTGAAATGCAGGTGGC+AGG + chr1_2:49678969-49678988 None:intergenic 55.0%
CTGCCACCTGCATTTCACCT+TGG - chr1_2:49678967-49678986 Msa0074760:CDS 55.0%
!! CACGAAGCATTGAAGGCCGT+TGG - chr1_2:49679468-49679487 Msa0074760:intron 55.0%
GTCAACAGACCAGGTACCAG+TGG - chr1_2:49679914-49679933 Msa0074760:five_prime_UTR 55.0%
! GTTGTAGTTGCCGGTGCCGA+CGG + chr1_2:49672925-49672944 None:intergenic 60.0%
CTGGCGGTGGTTGTAGTTGC+CGG + chr1_2:49672934-49672953 None:intergenic 60.0%
!! GGAAGCGCCGGTCAGAAACA+CGG - chr1_2:49673135-49673154 Msa0074760:intron 60.0%
! ACCTCCGCCGTGTTTCTGAC+CGG + chr1_2:49673145-49673164 None:intergenic 60.0%
CAGAAACACGGCGGAGGTAG+TGG - chr1_2:49673147-49673166 Msa0074760:intron 60.0%
! AAACACGGCGGAGGTAGTGG+CGG - chr1_2:49673150-49673169 Msa0074760:intron 60.0%
TTCGGCAAACGAGACCGGCA+GGG - chr1_2:49673214-49673233 Msa0074760:intron 60.0%
TTCCTCGCCGGATGAATCGG+AGG + chr1_2:49673255-49673274 None:intergenic 60.0%
ACCATCTCCGGTTTCCTCGC+CGG + chr1_2:49673267-49673286 None:intergenic 60.0%
AGCGGCAAGAGAATCGACGG+TGG - chr1_2:49673410-49673429 Msa0074760:CDS 60.0%
! GGAAACGATCAGGAGCGCGA+CGG - chr1_2:49673491-49673510 Msa0074760:CDS 60.0%
TGCGTGAGTGTGAGCACCAC+CGG - chr1_2:49673525-49673544 Msa0074760:CDS 60.0%
!!! CAACGTCGTCGCCGCTTTTC+CGG + chr1_2:49673547-49673566 None:intergenic 60.0%
CGTCGCCTGGTTGTTCTAGC+GGG - chr1_2:49673583-49673602 Msa0074760:CDS 60.0%
GCACTCCCGCTAGAACAACC+AGG + chr1_2:49673591-49673610 None:intergenic 60.0%
CCAGCTACAGTTGCTGCTGC+TGG + chr1_2:49678648-49678667 None:intergenic 60.0%
CCAGCAGCAGCAACTGTAGC+TGG - chr1_2:49678645-49678664 Msa0074760:CDS 60.0%
GGTGCAGCTGCAGGAACATG+GGG + chr1_2:49678711-49678730 None:intergenic 60.0%
CAGGTGCAGCTGCAGGAACA+TGG + chr1_2:49678713-49678732 None:intergenic 60.0%
TCTTGGCTCCCACTGGTACC+TGG + chr1_2:49679926-49679945 None:intergenic 60.0%
! GTTGTAGTTGCCGGTGCCGA+CGG + chr1_2:49672925-49672944 None:intergenic 60.0%
CTGGCGGTGGTTGTAGTTGC+CGG + chr1_2:49672934-49672953 None:intergenic 60.0%
!! GGAAGCGCCGGTCAGAAACA+CGG - chr1_2:49673135-49673154 Msa0074760:intron 60.0%
! ACCTCCGCCGTGTTTCTGAC+CGG + chr1_2:49673145-49673164 None:intergenic 60.0%
CAGAAACACGGCGGAGGTAG+TGG - chr1_2:49673147-49673166 Msa0074760:intron 60.0%
! AAACACGGCGGAGGTAGTGG+CGG - chr1_2:49673150-49673169 Msa0074760:intron 60.0%
TTCGGCAAACGAGACCGGCA+GGG - chr1_2:49673214-49673233 Msa0074760:intron 60.0%
TTCCTCGCCGGATGAATCGG+AGG + chr1_2:49673255-49673274 None:intergenic 60.0%
ACCATCTCCGGTTTCCTCGC+CGG + chr1_2:49673267-49673286 None:intergenic 60.0%
AGCGGCAAGAGAATCGACGG+TGG - chr1_2:49673410-49673429 Msa0074760:CDS 60.0%
! GGAAACGATCAGGAGCGCGA+CGG - chr1_2:49673491-49673510 Msa0074760:CDS 60.0%
TGCGTGAGTGTGAGCACCAC+CGG - chr1_2:49673525-49673544 Msa0074760:CDS 60.0%
!!! CAACGTCGTCGCCGCTTTTC+CGG + chr1_2:49673547-49673566 None:intergenic 60.0%
CGTCGCCTGGTTGTTCTAGC+GGG - chr1_2:49673583-49673602 Msa0074760:CDS 60.0%
GCACTCCCGCTAGAACAACC+AGG + chr1_2:49673591-49673610 None:intergenic 60.0%
CCAGCTACAGTTGCTGCTGC+TGG + chr1_2:49678648-49678667 None:intergenic 60.0%
CCAGCAGCAGCAACTGTAGC+TGG - chr1_2:49678645-49678664 Msa0074760:CDS 60.0%
GGTGCAGCTGCAGGAACATG+GGG + chr1_2:49678711-49678730 None:intergenic 60.0%
CAGGTGCAGCTGCAGGAACA+TGG + chr1_2:49678713-49678732 None:intergenic 60.0%
TCTTGGCTCCCACTGGTACC+TGG + chr1_2:49679926-49679945 None:intergenic 60.0%
AGGAATCACGCGACTGGCGG+TGG + chr1_2:49672947-49672966 None:intergenic 65.0%
!! AGCGCCGGTCAGAAACACGG+CGG - chr1_2:49673138-49673157 Msa0074760:intron 65.0%
GTTCGGCAAACGAGACCGGC+AGG - chr1_2:49673213-49673232 Msa0074760:intron 65.0%
TCGGCAAACGAGACCGGCAG+GGG - chr1_2:49673215-49673234 Msa0074760:intron 65.0%
TCCGGCGAGGAAACCGGAGA+TGG - chr1_2:49673263-49673282 Msa0074760:intron 65.0%
GGCGAGGAAACCGGAGATGG+TGG - chr1_2:49673266-49673285 Msa0074760:intron 65.0%
! AACGATCAGGAGCGCGACGG+CGG - chr1_2:49673494-49673513 Msa0074760:CDS 65.0%
CGGAAAAGCGGCGACGACGT+TGG - chr1_2:49673545-49673564 Msa0074760:CDS 65.0%
CCCATCCCCATTCCCATCGC+CGG + chr1_2:49678543-49678562 None:intergenic 65.0%
CCGGCGATGGGAATGGGGAT+GGG - chr1_2:49678540-49678559 Msa0074760:intron 65.0%
!! GGTGGGGACCGAGGTATTGC+TGG + chr1_2:49678845-49678864 None:intergenic 65.0%
GCAATACCTCGGTCCCCACC+AGG - chr1_2:49678845-49678864 Msa0074760:CDS 65.0%
AGGAATCACGCGACTGGCGG+TGG + chr1_2:49672947-49672966 None:intergenic 65.0%
!! AGCGCCGGTCAGAAACACGG+CGG - chr1_2:49673138-49673157 Msa0074760:intron 65.0%
GTTCGGCAAACGAGACCGGC+AGG - chr1_2:49673213-49673232 Msa0074760:intron 65.0%
TCGGCAAACGAGACCGGCAG+GGG - chr1_2:49673215-49673234 Msa0074760:intron 65.0%
TCCGGCGAGGAAACCGGAGA+TGG - chr1_2:49673263-49673282 Msa0074760:intron 65.0%
GGCGAGGAAACCGGAGATGG+TGG - chr1_2:49673266-49673285 Msa0074760:intron 65.0%
! AACGATCAGGAGCGCGACGG+CGG - chr1_2:49673494-49673513 Msa0074760:CDS 65.0%
CGGAAAAGCGGCGACGACGT+TGG - chr1_2:49673545-49673564 Msa0074760:CDS 65.0%
CCCATCCCCATTCCCATCGC+CGG + chr1_2:49678543-49678562 None:intergenic 65.0%
CCGGCGATGGGAATGGGGAT+GGG - chr1_2:49678540-49678559 Msa0074760:intron 65.0%
!! GGTGGGGACCGAGGTATTGC+TGG + chr1_2:49678845-49678864 None:intergenic 65.0%
GCAATACCTCGGTCCCCACC+AGG - chr1_2:49678845-49678864 Msa0074760:CDS 65.0%
GCCGGTCAGAAACACGGCGG+AGG - chr1_2:49673141-49673160 Msa0074760:intron 70.0%
GCAAACGAGACCGGCAGGGG+TGG - chr1_2:49673218-49673237 Msa0074760:intron 70.0%
AACGAGACCGGCAGGGGTGG+CGG - chr1_2:49673221-49673240 Msa0074760:intron 70.0%
GGCCTCCGATTCATCCGGCG+AGG - chr1_2:49673250-49673269 Msa0074760:intron 70.0%
!!! CGTCGTCGCCGCTTTTCCGG+TGG + chr1_2:49673544-49673563 None:intergenic 70.0%
GCCGGCGATGGGAATGGGGA+TGG - chr1_2:49678539-49678558 Msa0074760:intron 70.0%
GCCGGTCAGAAACACGGCGG+AGG - chr1_2:49673141-49673160 Msa0074760:intron 70.0%
GCAAACGAGACCGGCAGGGG+TGG - chr1_2:49673218-49673237 Msa0074760:intron 70.0%
AACGAGACCGGCAGGGGTGG+CGG - chr1_2:49673221-49673240 Msa0074760:intron 70.0%
GGCCTCCGATTCATCCGGCG+AGG - chr1_2:49673250-49673269 Msa0074760:intron 70.0%
!!! CGTCGTCGCCGCTTTTCCGG+TGG + chr1_2:49673544-49673563 None:intergenic 70.0%
GCCGGCGATGGGAATGGGGA+TGG - chr1_2:49678539-49678558 Msa0074760:intron 70.0%
CGAGAAGCCGCCACCCCTGC+CGG + chr1_2:49673231-49673250 None:intergenic 75.0%
! CGGCAGGGGTGGCGGCTTCT+CGG - chr1_2:49673229-49673248 Msa0074760:intron 75.0%
! AGGAGCGCGACGGCGGAGAC+TGG - chr1_2:49673501-49673520 Msa0074760:CDS 75.0%
GCTGCACCTGGTGGGGACCG+AGG + chr1_2:49678854-49678873 None:intergenic 75.0%
CGAGAAGCCGCCACCCCTGC+CGG + chr1_2:49673231-49673250 None:intergenic 75.0%
! CGGCAGGGGTGGCGGCTTCT+CGG - chr1_2:49673229-49673248 Msa0074760:intron 75.0%
! AGGAGCGCGACGGCGGAGAC+TGG - chr1_2:49673501-49673520 Msa0074760:CDS 75.0%
GCTGCACCTGGTGGGGACCG+AGG + chr1_2:49678854-49678873 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 49672284 49679975 49672284 ID=Msa0074760;Name=Msa0074760
chr1_2 mRNA 49672284 49679975 49672284 ID=Msa0074760-mRNA-1;Parent=Msa0074760;Name=Msa0074760-mRNA-1;_AED=0.22;_eAED=0.22;_QI=288|1|1|1|0.85|0.75|8|11|546
chr1_2 exon 49672284 49672363 49672284 ID=Msa0074760-mRNA-1:exon:15164;Parent=Msa0074760-mRNA-1
chr1_2 exon 49673375 49673779 49673375 ID=Msa0074760-mRNA-1:exon:15163;Parent=Msa0074760-mRNA-1
chr1_2 exon 49675523 49675588 49675523 ID=Msa0074760-mRNA-1:exon:15162;Parent=Msa0074760-mRNA-1
chr1_2 exon 49675676 49675741 49675676 ID=Msa0074760-mRNA-1:exon:15161;Parent=Msa0074760-mRNA-1
chr1_2 exon 49675820 49675918 49675820 ID=Msa0074760-mRNA-1:exon:15160;Parent=Msa0074760-mRNA-1
chr1_2 exon 49678570 49679422 49678570 ID=Msa0074760-mRNA-1:exon:15159;Parent=Msa0074760-mRNA-1
chr1_2 exon 49679513 49679620 49679513 ID=Msa0074760-mRNA-1:exon:15158;Parent=Msa0074760-mRNA-1
chr1_2 exon 49679713 49679975 49679713 ID=Msa0074760-mRNA-1:exon:15157;Parent=Msa0074760-mRNA-1
chr1_2 five_prime_UTR 49679713 49679975 49679713 ID=Msa0074760-mRNA-1:five_prime_utr;Parent=Msa0074760-mRNA-1
chr1_2 five_prime_UTR 49679596 49679620 49679596 ID=Msa0074760-mRNA-1:five_prime_utr;Parent=Msa0074760-mRNA-1
chr1_2 CDS 49679513 49679595 49679513 ID=Msa0074760-mRNA-1:cds;Parent=Msa0074760-mRNA-1
chr1_2 CDS 49678570 49679422 49678570 ID=Msa0074760-mRNA-1:cds;Parent=Msa0074760-mRNA-1
chr1_2 CDS 49675820 49675918 49675820 ID=Msa0074760-mRNA-1:cds;Parent=Msa0074760-mRNA-1
chr1_2 CDS 49675676 49675741 49675676 ID=Msa0074760-mRNA-1:cds;Parent=Msa0074760-mRNA-1
chr1_2 CDS 49675523 49675588 49675523 ID=Msa0074760-mRNA-1:cds;Parent=Msa0074760-mRNA-1
chr1_2 CDS 49673375 49673779 49673375 ID=Msa0074760-mRNA-1:cds;Parent=Msa0074760-mRNA-1
chr1_2 CDS 49672295 49672363 49672295 ID=Msa0074760-mRNA-1:cds;Parent=Msa0074760-mRNA-1
chr1_2 three_prime_UTR 49672284 49672294 49672284 ID=Msa0074760-mRNA-1:three_prime_utr;Parent=Msa0074760-mRNA-1
Gene Sequence

>Msa0074760

ATGAATTACCATGTTCCAGATTTCGATATTCAAATGGATGATGAAGAAGAATACCCTATACATCATTCAAAGAAACCTTTCACGCAACAAGACGATGAGATCATGGAACTATTGTGGCAAAACGGACAAGTTGTGATGCAAAGCCAAAACCACCGCCAATTTAGAAAACCGTCGGCACCGGCAACTACAACCACCGCCAGTCGCGTGATTCCTGATCATAGAGAGATTCGATCAACCGATGCAGATAACTACATGAATCAACACTTGTTCATACAAGAAGATGAAATGGCATCGTGGCTTTTTGATTCAATGAATGAAGTTGAAGATCCTCCTTTCAACCGTCACGATTTCAGTTCAGAAACACTTTTTCATTCATCAGTCGGAAGCGCCGGTCAGAAACACGGCGGAGGTAGTGGCGGTGTTATACAAGCACAAGCCACGGAACGTGAGTCGGAGTTTGTTCGGCAAACGAGACCGGCAGGGGTGGCGGCTTCTCGGCCTCCGATTCATCCGGCGAGGAAACCGGAGATGGTGGTGAATAGAACACAGAAACCGGATATGGTGGTGAATAGAACACAGAATTTCGCGCATTTTACTAATACTAACCAAAGTAATGCGAGAAGTGAACCAGGTGCATCTTCGAGTTCGATGATTGCAGCGGCAAGAGAATCGACGGTGGTAGATTCATGTGATACGCCGGTCATGACAGCAAAAACGTACGCTGCTTCGAGATTATCGGAAACGATCAGGAGCGCGACGGCGGAGACTGGATGCGTGAGTGTGAGCACCACCGGAAAAGCGGCGACGACGTTGGATATGACAGTTACGTCGTCGCCTGGTTGTTCTAGCGGGAGTGCTGAACCGGTTCATAGAGAACCGGAGTTGGACCGGAAAAGGAAGGGACGTGAACCGGAAGAATCTGAGTTTCAGAGCGAGGATGTCGATTTTGAATGTCGGGAAGAAAAAAAACAACACCGTGGATCTACATCTGCAAAGAGATCCCGTGCTGCAGAGGTTCATAATCTCTCAGAGAGGAAGCGTCGAGATAGAATTAACGAAAAGATGAAAGCTTTGCAAGAACTTATACCGCGGTGCAACAAGTCCGACAAAGCTTCAATGTTGGATGAAGCAATTGAGTACTTGAAGTCATTGCAGTTACAAGTGCAGATGATGTCCATGGGATGTGGCATGATACCTATGATGTTTCCTGGAATTCAGCAATTTATGCCGGCGATGGGAATGGGGATGGGAATGGGTTTAGGGATGGAAATCGGAATGGGAATGAACAGACCAGTGATGCCATTTCCTAATATGTTGCCTAATTCTCCTTTGCCAGCAGCAGCAACTGTAGCTGGTCCTTTTGGACCAAGGTTCGCTATGCCTCCTTTCCATATGCCCCATGTTCCTGCAGCTGCACCTGATTCATCCAGAATGCAAGCAGAAAATCAATCAGACAACCCCCTTAACTCCCTTGGTGCTCTGCCTCCAAATCAATCACGCATTCCAAACCCAAACTTCACAGATCCTTACCAGCAATACCTCGGTCCCCACCAGGTGCAGCAATTAATGCAGGCAATGAACCAGCAAAATGTCAACAGACCAGGTACCAGTGGGAGCCAAGATAATCCAGAAAAGCATTAG
Protein sequence

>Msa0074760

MNYHVPDFDIQMDDEEEYPIHHSKKPFTQQDDEIMELLWQNGQVVMQSQNHRQFRKPSAPATTTTASRVIPDHREIRSTDADNYMNQHLFIQEDEMASWLFDSMNEVEDPPFNRHDFSSETLFHSSVGSAGQKHGGGSGGVIQAQATERESEFVRQTRPAGVAASRPPIHPARKPEMVVNRTQKPDMVVNRTQNFAHFTNTNQSNARSEPGASSSSMIAAARESTVVDSCDTPVMTAKTYAASRLSETIRSATAETGCVSVSTTGKAATTLDMTVTSSPGCSSGSAEPVHREPELDRKRKGREPEESEFQSEDVDFECREEKKQHRGSTSAKRSRAAEVHNLSERKRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGMIPMMFPGIQQFMPAMGMGMGMGLGMEIGMGMNRPVMPFPNMLPNSPLPAAATVAGPFGPRFAMPPFHMPHVPAAAPDSSRMQAENQSDNPLNSLGALPPNQSRIPNPNFTDPYQQYLGPHQVQQLMQAMNQQNVNRPGTSGSQDNPEKH*