Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41834.t1 | XP_003624768.1 | 97.6 | 335 | 8 | 0 | 1 | 335 | 1 | 335 | 7.80E-171 | 609.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41834.t1 | A9B9L4 | 36.1 | 244 | 150 | 2 | 85 | 327 | 6 | 244 | 2.0e-34 | 147.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41834.t1 | G7L2M8 | 97.6 | 335 | 8 | 0 | 1 | 335 | 1 | 335 | 5.6e-171 | 609.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene41834 | 0.8475 | 1.11E-59 | -1.69E-46 |
| MS.gene049171 | MS.gene41834 | 0.837932 | 3.88E-57 | -1.69E-46 |
| MS.gene049173 | MS.gene41834 | 0.828265 | 9.89E-55 | -1.69E-46 |
| MS.gene049217 | MS.gene41834 | 0.906277 | 1.76E-80 | -1.69E-46 |
| MS.gene049222 | MS.gene41834 | 0.874271 | 7.69E-68 | -1.69E-46 |
| MS.gene049232 | MS.gene41834 | 0.804573 | 2.02E-49 | -1.69E-46 |
| MS.gene049285 | MS.gene41834 | 0.885359 | 8.70E-72 | -1.69E-46 |
| MS.gene049320 | MS.gene41834 | 0.875528 | 2.87E-68 | -1.69E-46 |
| MS.gene04939 | MS.gene41834 | 0.831112 | 2.01E-55 | -1.69E-46 |
| MS.gene049427 | MS.gene41834 | 0.873844 | 1.07E-67 | -1.69E-46 |
| MS.gene049609 | MS.gene41834 | 0.818002 | 2.46E-52 | -1.69E-46 |
| MS.gene049615 | MS.gene41834 | 0.815739 | 7.92E-52 | -1.69E-46 |
| MS.gene049627 | MS.gene41834 | 0.82984 | 4.11E-55 | -1.69E-46 |
| MS.gene049633 | MS.gene41834 | 0.824925 | 6.20E-54 | -1.69E-46 |
| MS.gene049805 | MS.gene41834 | 0.841432 | 4.77E-58 | -1.69E-46 |
| MS.gene049828 | MS.gene41834 | 0.802561 | 5.29E-49 | -1.69E-46 |
| MS.gene05010 | MS.gene41834 | 0.810652 | 1.04E-50 | -1.69E-46 |
| MS.gene050163 | MS.gene41834 | 0.901317 | 3.03E-78 | -1.69E-46 |
| MS.gene050165 | MS.gene41834 | 0.900395 | 7.65E-78 | -1.69E-46 |
| MS.gene050333 | MS.gene41834 | 0.916101 | 2.67E-85 | -1.69E-46 |
| MS.gene050432 | MS.gene41834 | 0.808927 | 2.44E-50 | -1.69E-46 |
| MS.gene050444 | MS.gene41834 | 0.841118 | 5.77E-58 | -1.69E-46 |
| MS.gene050504 | MS.gene41834 | 0.861012 | 1.38E-63 | -1.69E-46 |
| MS.gene050518 | MS.gene41834 | 0.896115 | 5.03E-76 | -1.69E-46 |
| MS.gene050538 | MS.gene41834 | 0.847513 | 1.10E-59 | -1.69E-46 |
| MS.gene050577 | MS.gene41834 | 0.837917 | 3.92E-57 | -1.69E-46 |
| MS.gene050593 | MS.gene41834 | 0.81135 | 7.32E-51 | -1.69E-46 |
| MS.gene050612 | MS.gene41834 | 0.873709 | 1.19E-67 | -1.69E-46 |
| MS.gene050675 | MS.gene41834 | 0.850107 | 2.10E-60 | -1.69E-46 |
| MS.gene050699 | MS.gene41834 | 0.854233 | 1.41E-61 | -1.69E-46 |
| MS.gene050747 | MS.gene41834 | 0.833048 | 6.67E-56 | -1.69E-46 |
| MS.gene050767 | MS.gene41834 | 0.855407 | 6.44E-62 | -1.69E-46 |
| MS.gene050770 | MS.gene41834 | 0.857126 | 2.02E-62 | -1.69E-46 |
| MS.gene050772 | MS.gene41834 | 0.862818 | 3.87E-64 | -1.69E-46 |
| MS.gene05080 | MS.gene41834 | 0.834782 | 2.46E-56 | -1.69E-46 |
| MS.gene050812 | MS.gene41834 | 0.833924 | 4.03E-56 | -1.69E-46 |
| MS.gene050876 | MS.gene41834 | 0.813798 | 2.13E-51 | -1.69E-46 |
| MS.gene050904 | MS.gene41834 | 0.805054 | 1.61E-49 | -1.69E-46 |
| MS.gene050950 | MS.gene41834 | 0.825524 | 4.47E-54 | -1.69E-46 |
| MS.gene050986 | MS.gene41834 | 0.842434 | 2.59E-58 | -1.69E-46 |
| MS.gene05100 | MS.gene41834 | 0.877751 | 4.89E-69 | -1.69E-46 |
| MS.gene051228 | MS.gene41834 | 0.857201 | 1.92E-62 | -1.69E-46 |
| MS.gene051317 | MS.gene41834 | 0.842045 | 3.29E-58 | -1.69E-46 |
| MS.gene051387 | MS.gene41834 | 0.829566 | 4.79E-55 | -1.69E-46 |
| MS.gene051434 | MS.gene41834 | 0.821602 | 3.70E-53 | -1.69E-46 |
| MS.gene051551 | MS.gene41834 | 0.813098 | 3.04E-51 | -1.69E-46 |
| MS.gene051666 | MS.gene41834 | 0.851812 | 6.95E-61 | -1.69E-46 |
| MS.gene051694 | MS.gene41834 | 0.819439 | 1.16E-52 | -1.69E-46 |
| MS.gene051810 | MS.gene41834 | 0.850094 | 2.12E-60 | -1.69E-46 |
| MS.gene051858 | MS.gene41834 | 0.834487 | 2.91E-56 | -1.69E-46 |
| MS.gene051949 | MS.gene41834 | 0.826488 | 2.64E-54 | -1.69E-46 |
| MS.gene052164 | MS.gene41834 | 0.809152 | 2.18E-50 | -1.69E-46 |
| MS.gene052271 | MS.gene41834 | 0.885908 | 5.42E-72 | -1.69E-46 |
| MS.gene052290 | MS.gene41834 | 0.807375 | 5.21E-50 | -1.69E-46 |
| MS.gene052379 | MS.gene41834 | 0.881443 | 2.39E-70 | -1.69E-46 |
| MS.gene052482 | MS.gene41834 | 0.824612 | 7.34E-54 | -1.69E-46 |
| MS.gene052486 | MS.gene41834 | 0.836512 | 8.96E-57 | -1.69E-46 |
| MS.gene052605 | MS.gene41834 | 0.803735 | 3.03E-49 | -1.69E-46 |
| MS.gene052615 | MS.gene41834 | 0.82007 | 8.33E-53 | -1.69E-46 |
| MS.gene052670 | MS.gene41834 | 0.835402 | 1.71E-56 | -1.69E-46 |
| MS.gene052870 | MS.gene41834 | 0.816632 | 5.00E-52 | -1.69E-46 |
| MS.gene052872 | MS.gene41834 | 0.827825 | 1.26E-54 | -1.69E-46 |
| MS.gene052916 | MS.gene41834 | 0.839703 | 1.35E-57 | -1.69E-46 |
| MS.gene053009 | MS.gene41834 | 0.812239 | 4.69E-51 | -1.69E-46 |
| MS.gene053103 | MS.gene41834 | 0.812458 | 4.20E-51 | -1.69E-46 |
| MS.gene053104 | MS.gene41834 | 0.857457 | 1.61E-62 | -1.69E-46 |
| MS.gene053107 | MS.gene41834 | 0.843761 | 1.15E-58 | -1.69E-46 |
| MS.gene053207 | MS.gene41834 | 0.827646 | 1.39E-54 | -1.69E-46 |
| MS.gene053213 | MS.gene41834 | 0.864453 | 1.20E-64 | -1.69E-46 |
| MS.gene053286 | MS.gene41834 | 0.857077 | 2.09E-62 | -1.69E-46 |
| MS.gene053322 | MS.gene41834 | 0.867783 | 1.06E-65 | -1.69E-46 |
| MS.gene053384 | MS.gene41834 | 0.802966 | 4.37E-49 | -1.69E-46 |
| MS.gene053574 | MS.gene41834 | 0.81803 | 2.42E-52 | -1.69E-46 |
| MS.gene053579 | MS.gene41834 | 0.815345 | 9.70E-52 | -1.69E-46 |
| MS.gene053626 | MS.gene41834 | 0.806023 | 1.01E-49 | -1.69E-46 |
| MS.gene053632 | MS.gene41834 | 0.876044 | 1.91E-68 | -1.69E-46 |
| MS.gene053915 | MS.gene41834 | 0.823964 | 1.04E-53 | -1.69E-46 |
| MS.gene053916 | MS.gene41834 | 0.836449 | 9.30E-57 | -1.69E-46 |
| MS.gene054374 | MS.gene41834 | 0.838195 | 3.32E-57 | -1.69E-46 |
| MS.gene054376 | MS.gene41834 | 0.829006 | 6.55E-55 | -1.69E-46 |
| MS.gene054408 | MS.gene41834 | 0.814248 | 1.70E-51 | -1.69E-46 |
| MS.gene054595 | MS.gene41834 | 0.837886 | 3.99E-57 | -1.69E-46 |
| MS.gene054600 | MS.gene41834 | 0.846711 | 1.83E-59 | -1.69E-46 |
| MS.gene054642 | MS.gene41834 | 0.889504 | 2.28E-73 | -1.69E-46 |
| MS.gene054802 | MS.gene41834 | 0.863312 | 2.72E-64 | -1.69E-46 |
| MS.gene054803 | MS.gene41834 | 0.867089 | 1.77E-65 | -1.69E-46 |
| MS.gene054804 | MS.gene41834 | 0.865733 | 4.77E-65 | -1.69E-46 |
| MS.gene054954 | MS.gene41834 | 0.845825 | 3.19E-59 | -1.69E-46 |
| MS.gene05505 | MS.gene41834 | 0.827863 | 1.24E-54 | -1.69E-46 |
| MS.gene055154 | MS.gene41834 | -0.814433 | 1.54E-51 | -1.69E-46 |
| MS.gene055206 | MS.gene41834 | 0.844987 | 5.38E-59 | -1.69E-46 |
| MS.gene055212 | MS.gene41834 | 0.809211 | 2.12E-50 | -1.69E-46 |
| MS.gene055362 | MS.gene41834 | 0.848028 | 7.96E-60 | -1.69E-46 |
| MS.gene055397 | MS.gene41834 | 0.893056 | 8.97E-75 | -1.69E-46 |
| MS.gene055412 | MS.gene41834 | 0.816447 | 5.51E-52 | -1.69E-46 |
| MS.gene055499 | MS.gene41834 | 0.853603 | 2.14E-61 | -1.69E-46 |
| MS.gene055502 | MS.gene41834 | 0.87506 | 4.15E-68 | -1.69E-46 |
| MS.gene055577 | MS.gene41834 | 0.830967 | 2.18E-55 | -1.69E-46 |
| MS.gene055634 | MS.gene41834 | 0.868937 | 4.50E-66 | -1.69E-46 |
| MS.gene055636 | MS.gene41834 | 0.88777 | 1.07E-72 | -1.69E-46 |
| MS.gene055638 | MS.gene41834 | 0.91262 | 1.58E-83 | -1.69E-46 |
| MS.gene055647 | MS.gene41834 | 0.867344 | 1.47E-65 | -1.69E-46 |
| MS.gene055722 | MS.gene41834 | 0.827126 | 1.86E-54 | -1.69E-46 |
| MS.gene055748 | MS.gene41834 | 0.848545 | 5.72E-60 | -1.69E-46 |
| MS.gene055750 | MS.gene41834 | 0.844782 | 6.11E-59 | -1.69E-46 |
| MS.gene055751 | MS.gene41834 | 0.844907 | 5.65E-59 | -1.69E-46 |
| MS.gene05592 | MS.gene41834 | 0.851076 | 1.12E-60 | -1.69E-46 |
| MS.gene055941 | MS.gene41834 | 0.85685 | 2.43E-62 | -1.69E-46 |
| MS.gene055956 | MS.gene41834 | -0.836925 | 7.03E-57 | -1.69E-46 |
| MS.gene056374 | MS.gene41834 | 0.845682 | 3.49E-59 | -1.69E-46 |
| MS.gene056449 | MS.gene41834 | 0.837366 | 5.42E-57 | -1.69E-46 |
| MS.gene056487 | MS.gene41834 | 0.832801 | 7.68E-56 | -1.69E-46 |
| MS.gene056504 | MS.gene41834 | 0.810497 | 1.12E-50 | -1.69E-46 |
| MS.gene056510 | MS.gene41834 | 0.83189 | 1.29E-55 | -1.69E-46 |
| MS.gene056549 | MS.gene41834 | 0.876608 | 1.22E-68 | -1.69E-46 |
| MS.gene056609 | MS.gene41834 | 0.801604 | 8.33E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene41834 | 0.891922 | 2.55E-74 | -1.69E-46 |
| MS.gene056692 | MS.gene41834 | 0.854199 | 1.44E-61 | -1.69E-46 |
| MS.gene056898 | MS.gene41834 | 0.800562 | 1.36E-48 | -1.69E-46 |
| MS.gene056903 | MS.gene41834 | 0.828627 | 8.09E-55 | -1.69E-46 |
| MS.gene057011 | MS.gene41834 | 0.849087 | 4.05E-60 | -1.69E-46 |
| MS.gene057076 | MS.gene41834 | 0.812607 | 3.89E-51 | -1.69E-46 |
| MS.gene057129 | MS.gene41834 | 0.889048 | 3.43E-73 | -1.69E-46 |
| MS.gene057146 | MS.gene41834 | 0.847448 | 1.15E-59 | -1.69E-46 |
| MS.gene057246 | MS.gene41834 | 0.831242 | 1.87E-55 | -1.69E-46 |
| MS.gene057331 | MS.gene41834 | 0.821049 | 4.96E-53 | -1.69E-46 |
| MS.gene05735 | MS.gene41834 | 0.809652 | 1.70E-50 | -1.69E-46 |
| MS.gene057416 | MS.gene41834 | 0.862229 | 5.88E-64 | -1.69E-46 |
| MS.gene057831 | MS.gene41834 | 0.861356 | 1.09E-63 | -1.69E-46 |
| MS.gene057926 | MS.gene41834 | 0.828783 | 7.42E-55 | -1.69E-46 |
| MS.gene057927 | MS.gene41834 | 0.813684 | 2.26E-51 | -1.69E-46 |
| MS.gene058019 | MS.gene41834 | 0.858825 | 6.31E-63 | -1.69E-46 |
| MS.gene058293 | MS.gene41834 | 0.82393 | 1.06E-53 | -1.69E-46 |
| MS.gene058323 | MS.gene41834 | 0.818723 | 1.69E-52 | -1.69E-46 |
| MS.gene058335 | MS.gene41834 | 0.805613 | 1.23E-49 | -1.69E-46 |
| MS.gene058338 | MS.gene41834 | 0.801922 | 7.16E-49 | -1.69E-46 |
| MS.gene05837 | MS.gene41834 | 0.817567 | 3.08E-52 | -1.69E-46 |
| MS.gene058419 | MS.gene41834 | 0.887032 | 2.04E-72 | -1.69E-46 |
| MS.gene058544 | MS.gene41834 | 0.835046 | 2.11E-56 | -1.69E-46 |
| MS.gene058660 | MS.gene41834 | 0.811643 | 6.32E-51 | -1.69E-46 |
| MS.gene058723 | MS.gene41834 | 0.818535 | 1.86E-52 | -1.69E-46 |
| MS.gene058773 | MS.gene41834 | 0.859263 | 4.67E-63 | -1.69E-46 |
| MS.gene05883 | MS.gene41834 | 0.802719 | 4.91E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene41834 | 0.834278 | 3.29E-56 | -1.69E-46 |
| MS.gene059023 | MS.gene41834 | 0.831756 | 1.39E-55 | -1.69E-46 |
| MS.gene059029 | MS.gene41834 | 0.863825 | 1.89E-64 | -1.69E-46 |
| MS.gene059079 | MS.gene41834 | 0.869957 | 2.10E-66 | -1.69E-46 |
| MS.gene05913 | MS.gene41834 | 0.813858 | 2.07E-51 | -1.69E-46 |
| MS.gene05934 | MS.gene41834 | 0.882069 | 1.42E-70 | -1.69E-46 |
| MS.gene059367 | MS.gene41834 | 0.823791 | 1.15E-53 | -1.69E-46 |
| MS.gene059526 | MS.gene41834 | -0.800365 | 1.49E-48 | -1.69E-46 |
| MS.gene059536 | MS.gene41834 | 0.836367 | 9.76E-57 | -1.69E-46 |
| MS.gene059676 | MS.gene41834 | 0.819405 | 1.18E-52 | -1.69E-46 |
| MS.gene059677 | MS.gene41834 | 0.873091 | 1.92E-67 | -1.69E-46 |
| MS.gene059718 | MS.gene41834 | 0.856605 | 2.87E-62 | -1.69E-46 |
| MS.gene059756 | MS.gene41834 | 0.833099 | 6.48E-56 | -1.69E-46 |
| MS.gene059801 | MS.gene41834 | 0.825265 | 5.15E-54 | -1.69E-46 |
| MS.gene059865 | MS.gene41834 | 0.81038 | 1.19E-50 | -1.69E-46 |
| MS.gene059902 | MS.gene41834 | 0.8304 | 3.00E-55 | -1.69E-46 |
| MS.gene059960 | MS.gene41834 | 0.920286 | 1.55E-87 | -1.69E-46 |
| MS.gene060193 | MS.gene41834 | 0.852836 | 3.55E-61 | -1.69E-46 |
| MS.gene060703 | MS.gene41834 | 0.826466 | 2.67E-54 | -1.69E-46 |
| MS.gene060728 | MS.gene41834 | 0.834886 | 2.31E-56 | -1.69E-46 |
| MS.gene060762 | MS.gene41834 | 0.842825 | 2.04E-58 | -1.69E-46 |
| MS.gene06077 | MS.gene41834 | 0.828237 | 1.01E-54 | -1.69E-46 |
| MS.gene060804 | MS.gene41834 | 0.836289 | 1.02E-56 | -1.69E-46 |
| MS.gene060818 | MS.gene41834 | 0.864531 | 1.14E-64 | -1.69E-46 |
| MS.gene060835 | MS.gene41834 | 0.806825 | 6.81E-50 | -1.69E-46 |
| MS.gene06092 | MS.gene41834 | 0.854262 | 1.38E-61 | -1.69E-46 |
| MS.gene060982 | MS.gene41834 | 0.81807 | 2.37E-52 | -1.69E-46 |
| MS.gene061041 | MS.gene41834 | 0.836823 | 7.47E-57 | -1.69E-46 |
| MS.gene061134 | MS.gene41834 | 0.858248 | 9.39E-63 | -1.69E-46 |
| MS.gene061150 | MS.gene41834 | 0.867192 | 1.64E-65 | -1.69E-46 |
| MS.gene061171 | MS.gene41834 | 0.841009 | 6.16E-58 | -1.69E-46 |
| MS.gene061200 | MS.gene41834 | 0.91682 | 1.12E-85 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41834.t1 | MTR_7g087250 | 97.612 | 335 | 8 | 0 | 1 | 335 | 1 | 335 | 0.0 | 659 |
| MS.gene41834.t1 | MTR_7g087250 | 98.047 | 256 | 5 | 0 | 1 | 256 | 1 | 256 | 0.0 | 503 |
| MS.gene41834.t1 | MTR_3g073450 | 47.030 | 202 | 105 | 1 | 103 | 304 | 84 | 283 | 3.47e-57 | 187 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41834.t1 | AT5G17710 | 59.615 | 312 | 112 | 6 | 1 | 305 | 1 | 305 | 1.01e-109 | 323 |
| MS.gene41834.t1 | AT5G17710 | 58.974 | 312 | 112 | 6 | 1 | 305 | 1 | 303 | 5.80e-108 | 318 |
| MS.gene41834.t1 | AT5G17710 | 58.974 | 312 | 112 | 6 | 1 | 305 | 1 | 303 | 5.80e-108 | 318 |
| MS.gene41834.t1 | AT1G36390 | 51.613 | 186 | 90 | 0 | 115 | 300 | 78 | 263 | 5.18e-64 | 204 |
| MS.gene41834.t1 | AT1G36390 | 51.613 | 186 | 90 | 0 | 115 | 300 | 78 | 263 | 5.18e-64 | 204 |
| MS.gene41834.t1 | AT4G26780 | 30.065 | 153 | 88 | 2 | 163 | 299 | 166 | 315 | 4.26e-12 | 66.6 |
Find 108 sgRNAs with CRISPR-Local
Find 255 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTGTGGTGCTTCTTGTTC+CGG | 0.235131 | 7.3:+21664161 | None:intergenic |
| GCTTCTTGTTCCGGCTTTGC+AGG | 0.261284 | 7.3:+21664170 | None:intergenic |
| TTCACCCGAGGTTCAGGTTC+TGG | 0.328084 | 7.3:-21667753 | MS.gene41834:intron |
| TCAAGATTCACCCGAGGTTC+AGG | 0.335433 | 7.3:-21667759 | MS.gene41834:CDS |
| GACGGAAACGCGTGAGGTTC+TGG | 0.344746 | 7.3:+21667901 | None:intergenic |
| GCTGATACCTTCACCATTGA+TGG | 0.346148 | 7.3:+21664203 | None:intergenic |
| AAGTGGTGAAGGTCTTCTTC+TGG | 0.348290 | 7.3:+21667871 | None:intergenic |
| CGGCGGTGGTGAGAAGGGTT+GGG | 0.348997 | 7.3:+21667942 | None:intergenic |
| GTGCAGACTTTGACAATTAT+CGG | 0.363290 | 7.3:-21665403 | MS.gene41834:CDS |
| TGTTCCGGCTTTGCAGGTCC+TGG | 0.373423 | 7.3:+21664176 | None:intergenic |
| GCGGCGGTGGTGAGAAGGGT+TGG | 0.378634 | 7.3:+21667941 | None:intergenic |
| GGAGAGTTTGTTGCCTGTAT+TGG | 0.387083 | 7.3:-21665324 | MS.gene41834:CDS |
| TATTGATAACTCTTCGGATA+AGG | 0.394655 | 7.3:+21665451 | None:intergenic |
| ATGGCCGGAATGTGGGAGTT+CGG | 0.396663 | 7.3:+21667966 | None:intergenic |
| GGTTGGGGATGGCCGGAATG+TGG | 0.403395 | 7.3:+21667958 | None:intergenic |
| GAGCATTTGTGACCAGTGAT+AGG | 0.406167 | 7.3:+21665360 | None:intergenic |
| AAGGTACTAACTTGACGAAC+CGG | 0.414480 | 7.3:+21667816 | None:intergenic |
| GGCGGTGGTGAGAAGGGTTG+GGG | 0.414826 | 7.3:+21667943 | None:intergenic |
| TCCTCCGAACTCCCACATTC+CGG | 0.425268 | 7.3:-21667970 | MS.gene41834:CDS |
| CTCTCAAAATTATCCAATAC+AGG | 0.430687 | 7.3:+21665311 | None:intergenic |
| ACTGTCCTGAGAAGTTTCAT+TGG | 0.438344 | 7.3:+21664127 | None:intergenic |
| TAACTTACCATTGGATCAAA+GGG | 0.444978 | 7.3:+21665158 | None:intergenic |
| ATTGGAAGAGGTGGCGGCGG+TGG | 0.451328 | 7.3:+21667928 | None:intergenic |
| GATGAGATAGTAGGTCTTGA+AGG | 0.461337 | 7.3:-21665485 | MS.gene41834:CDS |
| GCGTGAGGTTCTGGAGTGAT+TGG | 0.473186 | 7.3:+21667910 | None:intergenic |
| CCACTTAAATCCCACCGGTT+CGG | 0.474511 | 7.3:-21667854 | MS.gene41834:CDS |
| AGGTGGCGGCGGTGGTGAGA+AGG | 0.476821 | 7.3:+21667936 | None:intergenic |
| TGGTCCAGGACCTGCAAAGC+CGG | 0.479523 | 7.3:-21664180 | MS.gene41834:CDS |
| ACCTACTATCTCATCATCAA+TGG | 0.481367 | 7.3:+21665493 | None:intergenic |
| TGGAGTTGAGCCAGTGGATA+CGG | 0.491468 | 7.3:-21665189 | MS.gene41834:CDS |
| TGAGAAGGGTTGGGGATGGC+CGG | 0.493613 | 7.3:+21667951 | None:intergenic |
| ATCTTGAACTTGCGGTGCCT+CGG | 0.495956 | 7.3:+21667775 | None:intergenic |
| CCGCCTCTTACGTCCATCAA+TGG | 0.498736 | 7.3:-21664216 | MS.gene41834:CDS |
| GTTGGGGATGGCCGGAATGT+GGG | 0.500157 | 7.3:+21667959 | None:intergenic |
| GCCGGAACAAGAAGCACCAC+AGG | 0.504206 | 7.3:-21664162 | MS.gene41834:CDS |
| GTTCGGAGGACGGTGGCCAT+CGG | 0.508967 | 7.3:+21667983 | None:intergenic |
| TGGAAATCCCTTTGATCCAA+TGG | 0.509314 | 7.3:-21665165 | MS.gene41834:intron |
| TTAACTTACCATTGGATCAA+AGG | 0.511196 | 7.3:+21665157 | None:intergenic |
| TCGGTTCAATTCCCACTCCC+CGG | 0.511973 | 7.3:-21667835 | MS.gene41834:CDS |
| ATTGAAATTCTAAACTCACT+TGG | 0.514285 | 7.3:-21665209 | MS.gene41834:CDS |
| AACTTGACGAACCGGGGAGT+GGG | 0.515310 | 7.3:+21667824 | None:intergenic |
| TCACCATTGATGGACGTAAG+AGG | 0.516147 | 7.3:+21664213 | None:intergenic |
| ATACTTCAAGAATTCAGAAA+GGG | 0.518433 | 7.3:-21664254 | MS.gene41834:CDS |
| GGTGGCGGCGGTGGTGAGAA+GGG | 0.521742 | 7.3:+21667937 | None:intergenic |
| GTGGTGAGAAGGGTTGGGGA+TGG | 0.524363 | 7.3:+21667947 | None:intergenic |
| AGGTACTAACTTGACGAACC+GGG | 0.524465 | 7.3:+21667817 | None:intergenic |
| GAGAGCTAAAGCTCAGATCA+AGG | 0.525781 | 7.3:-21665291 | MS.gene41834:CDS |
| TGCAGTCAAAGTTGCTGAGT+TGG | 0.525898 | 7.3:-21665531 | MS.gene41834:CDS |
| TACAGATGGTGCTGCTGATG+TGG | 0.527477 | 7.3:-21665657 | MS.gene41834:CDS |
| GTATCTCCGTCAAAAGCAAA+AGG | 0.528487 | 7.3:+21667797 | None:intergenic |
| TAACTTGACGAACCGGGGAG+TGG | 0.538642 | 7.3:+21667823 | None:intergenic |
| AGTCACCAATGAAACTTCTC+AGG | 0.539784 | 7.3:-21664132 | MS.gene41834:CDS |
| GAGTGGGAATTGAACCGAAC+CGG | 0.540147 | 7.3:+21667840 | None:intergenic |
| GATGATGAGGTCAGCGACGC+TGG | 0.540308 | 7.3:-21665620 | MS.gene41834:CDS |
| AATACTATCAGAGGTGAAGC+AGG | 0.540458 | 7.3:+21665590 | None:intergenic |
| CAGATCAAGGTGGAGACAGA+GGG | 0.544694 | 7.3:-21665278 | MS.gene41834:CDS |
| GTGATTGGAAGAGGTGGCGG+CGG | 0.545968 | 7.3:+21667925 | None:intergenic |
| CATACTTCAAGAATTCAGAA+AGG | 0.546520 | 7.3:-21664255 | MS.gene41834:CDS |
| GTGAAGGTATCAGCTGGTCC+AGG | 0.550393 | 7.3:-21664194 | MS.gene41834:CDS |
| CGACAGAGATCGCCTATCAC+TGG | 0.551748 | 7.3:-21665372 | MS.gene41834:CDS |
| GATTCTGATGAATTTGAAGA+TGG | 0.552865 | 7.3:-21664281 | MS.gene41834:CDS |
| CACTGGTCACAAATGCTCAA+GGG | 0.553819 | 7.3:-21665355 | MS.gene41834:CDS |
| CTTACCAGAACCTGAACCTC+GGG | 0.555423 | 7.3:+21667749 | None:intergenic |
| GGAGTGATTGGAAGAGGTGG+CGG | 0.556647 | 7.3:+21667922 | None:intergenic |
| TCCATTGATGATGAGATAGT+AGG | 0.558085 | 7.3:-21665494 | MS.gene41834:CDS |
| GGTTCTGGAGTGATTGGAAG+AGG | 0.564346 | 7.3:+21667916 | None:intergenic |
| CGGTGGGATTTAAGTGGTGA+AGG | 0.570915 | 7.3:+21667860 | None:intergenic |
| CCGAACCGGTGGGATTTAAG+TGG | 0.571186 | 7.3:+21667854 | None:intergenic |
| GAATGTGGGAGTTCGGAGGA+CGG | 0.572182 | 7.3:+21667973 | None:intergenic |
| TTGGTGACTTGCTCTTCCTG+TGG | 0.572297 | 7.3:+21664146 | None:intergenic |
| TGGGAATTGAACCGAACCGG+TGG | 0.574334 | 7.3:+21667843 | None:intergenic |
| ATGAGATAGTAGGTCTTGAA+GGG | 0.578111 | 7.3:-21665484 | MS.gene41834:CDS |
| TCTTCTTCTGGAGGATGCGA+CGG | 0.580174 | 7.3:+21667883 | None:intergenic |
| GGATTTCCAACCGTATCCAC+TGG | 0.582289 | 7.3:+21665179 | None:intergenic |
| TCAGATCAAGGTGGAGACAG+AGG | 0.582701 | 7.3:-21665279 | MS.gene41834:CDS |
| CAGGACAGTAAAGAGAATGA+TGG | 0.584249 | 7.3:-21664113 | MS.gene41834:CDS |
| TCACTGGTCACAAATGCTCA+AGG | 0.585062 | 7.3:-21665356 | MS.gene41834:CDS |
| CAGTGATAGGCGATCTCTGT+CGG | 0.589421 | 7.3:+21665373 | None:intergenic |
| GGCAAAGTTGTACTTTCAAG+CGG | 0.590604 | 7.3:+21664073 | None:intergenic |
| GTTGAGCCAGTGGATACGGT+TGG | 0.590743 | 7.3:-21665185 | MS.gene41834:CDS |
| TCGGGTGAATCTTGAACTTG+CGG | 0.591032 | 7.3:+21667767 | None:intergenic |
| TCAATGGTGAAGGTATCAGC+TGG | 0.597135 | 7.3:-21664200 | MS.gene41834:CDS |
| TGATAACTCTTCGGATAAGG+AGG | 0.598835 | 7.3:+21665454 | None:intergenic |
| GACTGAAGTAATACTATCAG+AGG | 0.601933 | 7.3:+21665581 | None:intergenic |
| GCTGATGTGGAGGAGAGTAC+AGG | 0.606308 | 7.3:-21665644 | MS.gene41834:CDS |
| AAATGCTCAAGGGGAAGTTG+TGG | 0.607604 | 7.3:-21665345 | MS.gene41834:CDS |
| GGAGAGTACAGGTGATGATG+AGG | 0.608475 | 7.3:-21665633 | MS.gene41834:CDS |
| AAAGATCGAAAACTAAGGAT+CGG | 0.611204 | 7.3:-21665425 | MS.gene41834:CDS |
| CTTCACCACTTAAATCCCAC+CGG | 0.612873 | 7.3:-21667859 | MS.gene41834:CDS |
| GATCAAGGTGGAGACAGAGG+GGG | 0.620556 | 7.3:-21665276 | MS.gene41834:CDS |
| CTTACGTCCATCAATGGTGA+AGG | 0.622403 | 7.3:-21664210 | MS.gene41834:CDS |
| TCTGGAGTGATTGGAAGAGG+TGG | 0.625988 | 7.3:+21667919 | None:intergenic |
| ATTCAACAGGACTCTACAGA+TGG | 0.628787 | 7.3:-21665671 | MS.gene41834:intron |
| ACTGGTCACAAATGCTCAAG+GGG | 0.630703 | 7.3:-21665354 | MS.gene41834:CDS |
| GCCGGAATGTGGGAGTTCGG+AGG | 0.636031 | 7.3:+21667969 | None:intergenic |
| TGGTGAAGGTCTTCTTCTGG+AGG | 0.639079 | 7.3:+21667874 | None:intergenic |
| CTCACTTGGAGTTGAGCCAG+TGG | 0.641190 | 7.3:-21665195 | MS.gene41834:CDS |
| TGTGGGAGTTCGGAGGACGG+TGG | 0.642626 | 7.3:+21667976 | None:intergenic |
| GGATGCGACGGAAACGCGTG+AGG | 0.644324 | 7.3:+21667895 | None:intergenic |
| AGATGGTGCTGCTGATGTGG+AGG | 0.644434 | 7.3:-21665654 | MS.gene41834:CDS |
| ACTTACCAGAACCTGAACCT+CGG | 0.647885 | 7.3:+21667748 | None:intergenic |
| ACATGAAGCAATTATGCGTG+AGG | 0.649725 | 7.3:-21664303 | MS.gene41834:CDS |
| GGTACTAACTTGACGAACCG+GGG | 0.661706 | 7.3:+21667818 | None:intergenic |
| GGGAATTGAACCGAACCGGT+GGG | 0.665597 | 7.3:+21667844 | None:intergenic |
| AGATCAAGGTGGAGACAGAG+GGG | 0.666460 | 7.3:-21665277 | MS.gene41834:CDS |
| CCATTGATGGACGTAAGAGG+CGG | 0.691889 | 7.3:+21664216 | None:intergenic |
| GCAAGTTCAAGATTCACCCG+AGG | 0.716027 | 7.3:-21667765 | MS.gene41834:CDS |
| AGCTAAAGCTCAGATCAAGG+TGG | 0.719934 | 7.3:-21665288 | MS.gene41834:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAATTAACATAATACTA+AGG | - | chr7.3:21665766-21665785 | MS.gene41834:intron | 10.0% |
| !!! | AAATATAAATTACAAGATTT+TGG | - | chr7.3:21665817-21665836 | MS.gene41834:intron | 10.0% |
| !! | AAAATGAATATAACTATTTG+GGG | + | chr7.3:21665856-21665875 | None:intergenic | 15.0% |
| !! | AATCTTGTAATTTATATTTG+TGG | + | chr7.3:21665816-21665835 | None:intergenic | 15.0% |
| !! | ATTACTATTATTATTGTTGT+TGG | - | chr7.3:21666236-21666255 | MS.gene41834:intron | 15.0% |
| !! | GAAAATGAATATAACTATTT+GGG | + | chr7.3:21665857-21665876 | None:intergenic | 15.0% |
| !! | TAAGACAATGTAAATATAAA+AGG | + | chr7.3:21667083-21667102 | None:intergenic | 15.0% |
| !! | TGAAAATGAATATAACTATT+TGG | + | chr7.3:21665858-21665877 | None:intergenic | 15.0% |
| !! | TTGTAATTAAAACAGAAAAT+GGG | - | chr7.3:21664866-21664885 | MS.gene41834:intron | 15.0% |
| !! | TTTGTAATTAAAACAGAAAA+TGG | - | chr7.3:21664865-21664884 | MS.gene41834:intron | 15.0% |
| !!! | ATGGTTTAAAATTTTGAATT+GGG | - | chr7.3:21665065-21665084 | MS.gene41834:intron | 15.0% |
| !!! | ATTTAAAATGTCTCTAAATT+AGG | + | chr7.3:21666109-21666128 | None:intergenic | 15.0% |
| !!! | TAAATTTCTTTTTTTGCAAA+TGG | - | chr7.3:21667042-21667061 | MS.gene41834:intron | 15.0% |
| !!! | TGTTGTTTTTTTTTTTTTGA+GGG | - | chr7.3:21666274-21666293 | MS.gene41834:intron | 15.0% |
| !! | CATAGTTGTTAATTAGAAAA+AGG | - | chr7.3:21664446-21664465 | MS.gene41834:intron | 20.0% |
| !! | GTTTGAATTCAAAATCTTAA+TGG | + | chr7.3:21665350-21665369 | None:intergenic | 20.0% |
| !! | TTAATTACAAAAATCTCTTC+TGG | + | chr7.3:21664856-21664875 | None:intergenic | 20.0% |
| !!! | CATGGTTTAAAATTTTGAAT+TGG | - | chr7.3:21665064-21665083 | MS.gene41834:intron | 20.0% |
| !!! | GTGTTGTTTTTTTTTTTTTG+AGG | - | chr7.3:21666273-21666292 | MS.gene41834:intron | 20.0% |
| !!! | GTTAAAGAATTATTTTCAGT+TGG | - | chr7.3:21667567-21667586 | MS.gene41834:intron | 20.0% |
| !!! | GTTATTTATGATTTCTTTTG+TGG | - | chr7.3:21666322-21666341 | MS.gene41834:intron | 20.0% |
| !!! | TGTGACTGTTAAATTTTATA+TGG | - | chr7.3:21666156-21666175 | MS.gene41834:intron | 20.0% |
| !!! | TTATAGAACTACAAAGTTTT+AGG | - | chr7.3:21665616-21665635 | MS.gene41834:CDS | 20.0% |
| !!! | TTGTTATGTTTTTATTGCAT+TGG | - | chr7.3:21665008-21665027 | MS.gene41834:intron | 20.0% |
| !!! | TTTTTCTATTGATAACTCTT+CGG | + | chr7.3:21666626-21666645 | None:intergenic | 20.0% |
| ! | AAAATATAAACGAAAGAGGT+CGG | + | chr7.3:21667283-21667302 | None:intergenic | 25.0% |
| ! | AGAAAATCTTATTATCATGC+AGG | - | chr7.3:21666990-21667009 | MS.gene41834:intron | 25.0% |
| ! | ATACTTCAAGAATTCAGAAA+GGG | - | chr7.3:21667814-21667833 | MS.gene41834:CDS | 25.0% |
| ! | ATATTTGTGGTTTCTGTTTA+TGG | + | chr7.3:21665803-21665822 | None:intergenic | 25.0% |
| ! | ATCGGAAAAATTAAAATCGA+AGG | - | chr7.3:21664890-21664909 | MS.gene41834:intron | 25.0% |
| ! | ATTGAAATTCTAAACTCACT+TGG | - | chr7.3:21666859-21666878 | MS.gene41834:intron | 25.0% |
| ! | GAAATTTATCAGCTTCATTA+CGG | + | chr7.3:21667030-21667049 | None:intergenic | 25.0% |
| ! | GACAAAAATTATACTTCATG+AGG | + | chr7.3:21667191-21667210 | None:intergenic | 25.0% |
| ! | TAGAAAAAGATCGAAAACTA+AGG | - | chr7.3:21666638-21666657 | MS.gene41834:intron | 25.0% |
| ! | TATTTGTGGTTTCTGTTTAT+GGG | + | chr7.3:21665802-21665821 | None:intergenic | 25.0% |
| ! | TCCTTATATACTTTCTTTCA+AGG | + | chr7.3:21665936-21665955 | None:intergenic | 25.0% |
| ! | TCGGAAAAATTAAAATCGAA+GGG | - | chr7.3:21664891-21664910 | MS.gene41834:intron | 25.0% |
| ! | TTAAAACAGAAAATGGGAAT+CGG | - | chr7.3:21664872-21664891 | MS.gene41834:intron | 25.0% |
| ! | TTACACGTTTCTTAAGATAT+AGG | - | chr7.3:21667680-21667699 | MS.gene41834:intron | 25.0% |
| !! | AATTCCAATTTGGAATTTCT+AGG | + | chr7.3:21665598-21665617 | None:intergenic | 25.0% |
| !! | ACCTCTTTCGTTTATATTTT+TGG | - | chr7.3:21667283-21667302 | MS.gene41834:intron | 25.0% |
| !! | ACCTTGAAAGAAAGTATATA+AGG | - | chr7.3:21665932-21665951 | MS.gene41834:intron | 25.0% |
| !! | AGAAAGTATATAAGGATGTT+TGG | - | chr7.3:21665940-21665959 | MS.gene41834:intron | 25.0% |
| !! | ATATACAAGCACAGTATTTT+TGG | + | chr7.3:21666031-21666050 | None:intergenic | 25.0% |
| !! | ATTGATGATTAACTTACCAT+TGG | + | chr7.3:21666922-21666941 | None:intergenic | 25.0% |
| !! | GTAGTTCTATAATTCCAATT+TGG | + | chr7.3:21665608-21665627 | None:intergenic | 25.0% |
| !! | TCACAAATAAGCTTTAACTA+AGG | + | chr7.3:21666141-21666160 | None:intergenic | 25.0% |
| !!! | ATTTTGAGTAACTCAAACAA+AGG | - | chr7.3:21666180-21666199 | MS.gene41834:intron | 25.0% |
| !!! | TAAGAGATTTTTCAGAGAAT+GGG | + | chr7.3:21667240-21667259 | None:intergenic | 25.0% |
| !!! | TCAGTAGTTTTGTATTTGTT+TGG | - | chr7.3:21664541-21664560 | MS.gene41834:intron | 25.0% |
| !!! | TTAAGAGATTTTTCAGAGAA+TGG | + | chr7.3:21667241-21667260 | None:intergenic | 25.0% |
| AAAGATCGAAAACTAAGGAT+CGG | - | chr7.3:21666643-21666662 | MS.gene41834:intron | 30.0% | |
| ACACTATATCAAGTTTCTTC+AGG | - | chr7.3:21667389-21667408 | MS.gene41834:intron | 30.0% | |
| ACTCAAACAAAGGAAATAGT+TGG | - | chr7.3:21666190-21666209 | MS.gene41834:intron | 30.0% | |
| AGAAAAGATATTGAGAGAGA+TGG | + | chr7.3:21665999-21666018 | None:intergenic | 30.0% | |
| ATCTCCTAGAAATTCCAAAT+TGG | - | chr7.3:21665591-21665610 | MS.gene41834:CDS | 30.0% | |
| ATCTGTAGTCTCCATTTAAT+GGG | - | chr7.3:21665448-21665467 | MS.gene41834:CDS | 30.0% | |
| ATCTTAATGGTTTAGACAAC+AGG | + | chr7.3:21665337-21665356 | None:intergenic | 30.0% | |
| CATACTTCAAGAATTCAGAA+AGG | - | chr7.3:21667813-21667832 | MS.gene41834:CDS | 30.0% | |
| CCAGCAAATTAACATAAACA+AGG | + | chr7.3:21666370-21666389 | None:intergenic | 30.0% | |
| CGGAAAAATTAAAATCGAAG+GGG | - | chr7.3:21664892-21664911 | MS.gene41834:intron | 30.0% | |
| CTCAAACAAAGGAAATAGTT+GGG | - | chr7.3:21666191-21666210 | MS.gene41834:intron | 30.0% | |
| CTCTCAAAATTATCCAATAC+AGG | + | chr7.3:21666760-21666779 | None:intergenic | 30.0% | |
| GATTCTGATGAATTTGAAGA+TGG | - | chr7.3:21667787-21667806 | MS.gene41834:CDS | 30.0% | |
| GCCAAAAATATAAACGAAAG+AGG | + | chr7.3:21667287-21667306 | None:intergenic | 30.0% | |
| TAACTTACCATTGGATCAAA+GGG | + | chr7.3:21666913-21666932 | None:intergenic | 30.0% | |
| TACCTGTCTTTCAATATTGT+TGG | - | chr7.3:21667104-21667123 | MS.gene41834:intron | 30.0% | |
| TACTAACTATTAGCAAAGAG+TGG | - | chr7.3:21665123-21665142 | MS.gene41834:intron | 30.0% | |
| TATATCACTAACAAAACGTG+TGG | - | chr7.3:21664961-21664980 | MS.gene41834:intron | 30.0% | |
| TCAACTATTAGGTTAAGCTT+TGG | - | chr7.3:21664510-21664529 | MS.gene41834:intron | 30.0% | |
| TCTCTATGTAGAAAGAAAGA+AGG | + | chr7.3:21666973-21666992 | None:intergenic | 30.0% | |
| TGATATTGCGACAAATAGTA+GGG | - | chr7.3:21664648-21664667 | MS.gene41834:intron | 30.0% | |
| TGTCATCTATGATTTATGCA+GGG | - | chr7.3:21667314-21667333 | MS.gene41834:intron | 30.0% | |
| TTAAAGAAACCAAGTTACCA+GGG | - | chr7.3:21665646-21665665 | MS.gene41834:CDS | 30.0% | |
| TTAACTTACCATTGGATCAA+AGG | + | chr7.3:21666914-21666933 | None:intergenic | 30.0% | |
| TTCTTTCAAGGTTGTTAACA+GGG | + | chr7.3:21665924-21665943 | None:intergenic | 30.0% | |
| TTGATATTGCGACAAATAGT+AGG | - | chr7.3:21664647-21664666 | MS.gene41834:intron | 30.0% | |
| TTTAAAGAAACCAAGTTACC+AGG | - | chr7.3:21665645-21665664 | MS.gene41834:CDS | 30.0% | |
| TTTCTTTCAAGGTTGTTAAC+AGG | + | chr7.3:21665925-21665944 | None:intergenic | 30.0% | |
| TTTGAGAGCAAGAAACAAAT+TGG | - | chr7.3:21664827-21664846 | MS.gene41834:intron | 30.0% | |
| ! | AATTTGTTTCTTGCTCTCAA+AGG | + | chr7.3:21664828-21664847 | None:intergenic | 30.0% |
| ! | ATGAAAATGACTCCTTTTTC+TGG | - | chr7.3:21665175-21665194 | MS.gene41834:CDS | 30.0% |
| ! | ATTTGGAATTTCTAGGAGAT+TGG | + | chr7.3:21665591-21665610 | None:intergenic | 30.0% |
| ! | TATTGATAACTCTTCGGATA+AGG | + | chr7.3:21666620-21666639 | None:intergenic | 30.0% |
| !! | CCTTGTTTATGTTAATTTGC+TGG | - | chr7.3:21666367-21666386 | MS.gene41834:intron | 30.0% |
| !! | TAAGAGTTAAAAGTGTTTCC+AGG | + | chr7.3:21667426-21667445 | None:intergenic | 30.0% |
| !! | TCTTTGGATTAGCTTATTAC+AGG | + | chr7.3:21665563-21665582 | None:intergenic | 30.0% |
| !! | TTAGTACCTTTTGCTTTTGA+CGG | - | chr7.3:21664265-21664284 | MS.gene41834:CDS | 30.0% |
| !!! | GTAGTTTTGTATTTGTTTGG+AGG | - | chr7.3:21664544-21664563 | MS.gene41834:intron | 30.0% |
| !!! | TTCAGAAAGGGTTTTAAACT+TGG | - | chr7.3:21667826-21667845 | MS.gene41834:CDS | 30.0% |
| ACAGGGTTCAAGTAAACTTA+TGG | + | chr7.3:21665907-21665926 | None:intergenic | 35.0% | |
| ACCTACTATCTCATCATCAA+TGG | + | chr7.3:21666578-21666597 | None:intergenic | 35.0% | |
| ACTGCCTCAAATGAAACATT+TGG | - | chr7.3:21667630-21667649 | MS.gene41834:intron | 35.0% | |
| AGCACCAAATGTTTCATTTG+AGG | + | chr7.3:21667637-21667656 | None:intergenic | 35.0% | |
| AGTACAGTTACACCAGAAAA+AGG | + | chr7.3:21665190-21665209 | None:intergenic | 35.0% | |
| AGTCTCCATTTAATGGGAAA+AGG | - | chr7.3:21665454-21665473 | MS.gene41834:CDS | 35.0% | |
| ATGAGATAGTAGGTCTTGAA+GGG | - | chr7.3:21666584-21666603 | MS.gene41834:intron | 35.0% | |
| ATTGGCTATCCTGTATTGTA+AGG | - | chr7.3:21665026-21665045 | MS.gene41834:intron | 35.0% | |
| CATCTGTAGTCTCCATTTAA+TGG | - | chr7.3:21665447-21665466 | MS.gene41834:CDS | 35.0% | |
| CATTCTTAAACTCACCAAGT+TGG | + | chr7.3:21667470-21667489 | None:intergenic | 35.0% | |
| CTAATAGTTAGTAACCTACC+TGG | + | chr7.3:21665116-21665135 | None:intergenic | 35.0% | |
| CTGCTACAGAATCAACTATT+AGG | - | chr7.3:21664499-21664518 | MS.gene41834:intron | 35.0% | |
| CTGTCATCTATGATTTATGC+AGG | - | chr7.3:21667313-21667332 | MS.gene41834:intron | 35.0% | |
| CTGTCTTTCAATATTGTTGG+CGG | - | chr7.3:21667107-21667126 | MS.gene41834:intron | 35.0% | |
| GACTGAAGTAATACTATCAG+AGG | + | chr7.3:21666490-21666509 | None:intergenic | 35.0% | |
| GGTTCAAGTAAACTTATGGA+GGG | + | chr7.3:21665903-21665922 | None:intergenic | 35.0% | |
| GTCATCTATGATTTATGCAG+GGG | - | chr7.3:21667315-21667334 | MS.gene41834:intron | 35.0% | |
| GTGCAGACTTTGACAATTAT+CGG | - | chr7.3:21666665-21666684 | MS.gene41834:intron | 35.0% | |
| TTGGCTATCCTGTATTGTAA+GGG | - | chr7.3:21665027-21665046 | MS.gene41834:intron | 35.0% | |
| ! | CAAAGCCTTTTCCCATTAAA+TGG | + | chr7.3:21665462-21665481 | None:intergenic | 35.0% |
| ! | CACTTGTTTGAGCTTCTTTT+TGG | - | chr7.3:21665283-21665302 | MS.gene41834:CDS | 35.0% |
| !! | CAAATGAAACATTTGGTGCT+TGG | - | chr7.3:21667637-21667656 | MS.gene41834:intron | 35.0% |
| !! | CCTCTAAAGCCTTTATGTTA+CGG | - | chr7.3:21664720-21664739 | MS.gene41834:intron | 35.0% |
| !! | CTCTAAAGCCTTTATGTTAC+GGG | - | chr7.3:21664721-21664740 | MS.gene41834:intron | 35.0% |
| !! | TCCATTGATGATGAGATAGT+AGG | - | chr7.3:21666574-21666593 | MS.gene41834:intron | 35.0% |
| AATACTATCAGAGGTGAAGC+AGG | + | chr7.3:21666481-21666500 | None:intergenic | 40.0% | |
| ACATGAAGCAATTATGCGTG+AGG | - | chr7.3:21667765-21667784 | MS.gene41834:CDS | 40.0% | |
| ACTAACAAAACGTGTGGAAG+TGG | - | chr7.3:21664967-21664986 | MS.gene41834:intron | 40.0% | |
| ACTGTCCTGAGAAGTTTCAT+TGG | + | chr7.3:21667944-21667963 | None:intergenic | 40.0% | |
| AGTCACCAATGAAACTTCTC+AGG | - | chr7.3:21667936-21667955 | MS.gene41834:CDS | 40.0% | |
| ATTCAACAGGACTCTACAGA+TGG | - | chr7.3:21666397-21666416 | MS.gene41834:intron | 40.0% | |
| CAATTGCTCCCGTAACATAA+AGG | + | chr7.3:21664732-21664751 | None:intergenic | 40.0% | |
| CAGGACAGTAAAGAGAATGA+TGG | - | chr7.3:21667955-21667974 | MS.gene41834:CDS | 40.0% | |
| CGCCAACAATATTGAAAGAC+AGG | + | chr7.3:21667109-21667128 | None:intergenic | 40.0% | |
| CTATTAGCAAAGAGTGGAGA+AGG | - | chr7.3:21665129-21665148 | MS.gene41834:intron | 40.0% | |
| GATGAGATAGTAGGTCTTGA+AGG | - | chr7.3:21666583-21666602 | MS.gene41834:intron | 40.0% | |
| GGGTTCAAGTAAACTTATGG+AGG | + | chr7.3:21665904-21665923 | None:intergenic | 40.0% | |
| GTATCTCCGTCAAAAGCAAA+AGG | + | chr7.3:21664274-21664293 | None:intergenic | 40.0% | |
| TAGGAGATTGGATGCATCTT+TGG | + | chr7.3:21665579-21665598 | None:intergenic | 40.0% | |
| TCACAGAGTCGAGAAAAAGT+AGG | - | chr7.3:21667492-21667511 | MS.gene41834:intron | 40.0% | |
| TCTGTAGAGTCCTGTTGAAT+TGG | + | chr7.3:21666397-21666416 | None:intergenic | 40.0% | |
| TGATAACTCTTCGGATAAGG+AGG | + | chr7.3:21666617-21666636 | None:intergenic | 40.0% | |
| TGGAAATCCCTTTGATCCAA+TGG | - | chr7.3:21666903-21666922 | MS.gene41834:intron | 40.0% | |
| TGGCTATCCTGTATTGTAAG+GGG | - | chr7.3:21665028-21665047 | MS.gene41834:intron | 40.0% | |
| TGGGTGTAGAAGTGATGTAA+GGG | - | chr7.3:21665084-21665103 | MS.gene41834:intron | 40.0% | |
| TGTGCTAAGGTTTACGATTC+AGG | + | chr7.3:21665679-21665698 | None:intergenic | 40.0% | |
| TTGGGTGTAGAAGTGATGTA+AGG | - | chr7.3:21665083-21665102 | MS.gene41834:intron | 40.0% | |
| ! | AAGGTACTAACTTGACGAAC+CGG | + | chr7.3:21664255-21664274 | None:intergenic | 40.0% |
| ! | CCGTAACATAAAGGCTTTAG+AGG | + | chr7.3:21664723-21664742 | None:intergenic | 40.0% |
| ! | TTGTTGGCGGTCAATGTTTT+TGG | - | chr7.3:21667120-21667139 | MS.gene41834:intron | 40.0% |
| !! | AAAAGTGTTTCCAGGTCTTC+AGG | + | chr7.3:21667418-21667437 | None:intergenic | 40.0% |
| !! | CGAAGGGGAATTTGTTTTTC+TGG | - | chr7.3:21664907-21664926 | MS.gene41834:intron | 40.0% |
| !!! | TTTTTTGTCAGCTTCTCGAG+AGG | + | chr7.3:21665525-21665544 | None:intergenic | 40.0% |
| AAATGCTCAAGGGGAAGTTG+TGG | - | chr7.3:21666723-21666742 | MS.gene41834:intron | 45.0% | |
| AACAAAACGTGTGGAAGTGG+TGG | - | chr7.3:21664970-21664989 | MS.gene41834:intron | 45.0% | |
| AAGTGGTGAAGGTCTTCTTC+TGG | + | chr7.3:21664200-21664219 | None:intergenic | 45.0% | |
| ACTGGTCACAAATGCTCAAG+GGG | - | chr7.3:21666714-21666733 | MS.gene41834:intron | 45.0% | |
| ACTTACCAGAACCTGAACCT+CGG | + | chr7.3:21664323-21664342 | None:intergenic | 45.0% | |
| AGCTAAAGCTCAGATCAAGG+TGG | - | chr7.3:21666780-21666799 | MS.gene41834:intron | 45.0% | |
| AGGTACTAACTTGACGAACC+GGG | + | chr7.3:21664254-21664273 | None:intergenic | 45.0% | |
| ATTAGCATCACGAGTCCTTG+GGG | - | chr7.3:21665717-21665736 | MS.gene41834:intron | 45.0% | |
| CAAGGACTCGTGATGCTAAT+GGG | + | chr7.3:21665717-21665736 | None:intergenic | 45.0% | |
| CAAGTGTGCACTACGTTGTA+AGG | + | chr7.3:21665269-21665288 | None:intergenic | 45.0% | |
| CACTGGTCACAAATGCTCAA+GGG | - | chr7.3:21666713-21666732 | MS.gene41834:intron | 45.0% | |
| CATTAGCATCACGAGTCCTT+GGG | - | chr7.3:21665716-21665735 | MS.gene41834:intron | 45.0% | |
| CGATTGAATTTCGAGCCAAC+TGG | + | chr7.3:21667347-21667366 | None:intergenic | 45.0% | |
| CTTACGTCCATCAATGGTGA+AGG | - | chr7.3:21667858-21667877 | MS.gene41834:CDS | 45.0% | |
| CTTCACCACTTAAATCCCAC+CGG | - | chr7.3:21664209-21664228 | MS.gene41834:CDS | 45.0% | |
| GAGAGCTAAAGCTCAGATCA+AGG | - | chr7.3:21666777-21666796 | MS.gene41834:intron | 45.0% | |
| GAGCATTTGTGACCAGTGAT+AGG | + | chr7.3:21666711-21666730 | None:intergenic | 45.0% | |
| GCTGATACCTTCACCATTGA+TGG | + | chr7.3:21667868-21667887 | None:intergenic | 45.0% | |
| TCACAGACCCCTTACAATAC+AGG | + | chr7.3:21665038-21665057 | None:intergenic | 45.0% | |
| TCACTGGTCACAAATGCTCA+AGG | - | chr7.3:21666712-21666731 | MS.gene41834:intron | 45.0% | |
| TCGATTGTTTCGAGCCAACT+TGG | - | chr7.3:21667453-21667472 | MS.gene41834:intron | 45.0% | |
| TCGGGTGAATCTTGAACTTG+CGG | + | chr7.3:21664304-21664323 | None:intergenic | 45.0% | |
| TGCAGTCAAAGTTGCTGAGT+TGG | - | chr7.3:21666537-21666556 | MS.gene41834:intron | 45.0% | |
| TGCTGGTACACCAATTCAAC+AGG | - | chr7.3:21666384-21666403 | MS.gene41834:intron | 45.0% | |
| ! | TCACCATTGATGGACGTAAG+AGG | + | chr7.3:21667858-21667877 | None:intergenic | 45.0% |
| ! | TTCATTTGAGGCAGTAGCTG+AGG | + | chr7.3:21667625-21667644 | None:intergenic | 45.0% |
| !! | GGAGAGTTTGTTGCCTGTAT+TGG | - | chr7.3:21666744-21666763 | MS.gene41834:intron | 45.0% |
| !! | GGCGTTGGTAATATGTGCTA+AGG | + | chr7.3:21665692-21665711 | None:intergenic | 45.0% |
| !! | TCAATGGTGAAGGTATCAGC+TGG | - | chr7.3:21667868-21667887 | MS.gene41834:CDS | 45.0% |
| !!! | TTGGCGGTCAATGTTTTTGG+TGG | - | chr7.3:21667123-21667142 | MS.gene41834:intron | 45.0% |
| AAGAGTGGAGAAGGATCTGG+CGG | - | chr7.3:21665138-21665157 | MS.gene41834:intron | 50.0% | |
| ACGATTCAGGAGTTGTTCCC+TGG | + | chr7.3:21665666-21665685 | None:intergenic | 50.0% | |
| AGATCAAGGTGGAGACAGAG+GGG | - | chr7.3:21666791-21666810 | MS.gene41834:intron | 50.0% | |
| AGGGGTCTGTGAGCAATACA+TGG | - | chr7.3:21665046-21665065 | MS.gene41834:intron | 50.0% | |
| ATCTTGAACTTGCGGTGCCT+CGG | + | chr7.3:21664296-21664315 | None:intergenic | 50.0% | |
| CAGATCAAGGTGGAGACAGA+GGG | - | chr7.3:21666790-21666809 | MS.gene41834:intron | 50.0% | |
| CAGTGATAGGCGATCTCTGT+CGG | + | chr7.3:21666698-21666717 | None:intergenic | 50.0% | |
| CCAAGGACTCGTGATGCTAA+TGG | + | chr7.3:21665718-21665737 | None:intergenic | 50.0% | |
| CCATTAGCATCACGAGTCCT+TGG | - | chr7.3:21665715-21665734 | MS.gene41834:intron | 50.0% | |
| CGGTGGGATTTAAGTGGTGA+AGG | + | chr7.3:21664211-21664230 | None:intergenic | 50.0% | |
| CTAGTACTTGTAAGCCCCCA+AGG | + | chr7.3:21665735-21665754 | None:intergenic | 50.0% | |
| CTTACCAGAACCTGAACCTC+GGG | + | chr7.3:21664322-21664341 | None:intergenic | 50.0% | |
| GAGTGGGAATTGAACCGAAC+CGG | + | chr7.3:21664231-21664250 | None:intergenic | 50.0% | |
| GCAAAGAGTGGAGAAGGATC+TGG | - | chr7.3:21665135-21665154 | MS.gene41834:intron | 50.0% | |
| GCAAGTTCAAGATTCACCCG+AGG | - | chr7.3:21664303-21664322 | MS.gene41834:CDS | 50.0% | |
| GGAGTTGTTCCCTGGTAACT+TGG | + | chr7.3:21665658-21665677 | None:intergenic | 50.0% | |
| GGATTTCCAACCGTATCCAC+TGG | + | chr7.3:21666892-21666911 | None:intergenic | 50.0% | |
| GGTACTAACTTGACGAACCG+GGG | + | chr7.3:21664253-21664272 | None:intergenic | 50.0% | |
| GTGATGTAAGGGTAGAGTCC+AGG | - | chr7.3:21665095-21665114 | MS.gene41834:intron | 50.0% | |
| TCAAGATTCACCCGAGGTTC+AGG | - | chr7.3:21664309-21664328 | MS.gene41834:intron | 50.0% | |
| TCAGATCAAGGTGGAGACAG+AGG | - | chr7.3:21666789-21666808 | MS.gene41834:intron | 50.0% | |
| TCCTGTGGTGCTTCTTGTTC+CGG | + | chr7.3:21667910-21667929 | None:intergenic | 50.0% | |
| TGGAGTTGAGCCAGTGGATA+CGG | - | chr7.3:21666879-21666898 | MS.gene41834:intron | 50.0% | |
| TGGTGAAGGTCTTCTTCTGG+AGG | + | chr7.3:21664197-21664216 | None:intergenic | 50.0% | |
| TGTAAGGGTAGAGTCCAGGT+AGG | - | chr7.3:21665099-21665118 | MS.gene41834:intron | 50.0% | |
| TTAGCATCACGAGTCCTTGG+GGG | - | chr7.3:21665718-21665737 | MS.gene41834:intron | 50.0% | |
| ! | CCACTTAAATCCCACCGGTT+CGG | - | chr7.3:21664214-21664233 | MS.gene41834:CDS | 50.0% |
| ! | CCATTGATGGACGTAAGAGG+CGG | + | chr7.3:21667855-21667874 | None:intergenic | 50.0% |
| ! | CTTCAGGTTTCCTGAAGACC+TGG | - | chr7.3:21667405-21667424 | MS.gene41834:intron | 50.0% |
| ! | GGAGAGTACAGGTGATGATG+AGG | - | chr7.3:21666435-21666454 | MS.gene41834:intron | 50.0% |
| ! | TCTGGAGTGATTGGAAGAGG+TGG | + | chr7.3:21664152-21664171 | None:intergenic | 50.0% |
| ! | TCTTCTTCTGGAGGATGCGA+CGG | + | chr7.3:21664188-21664207 | None:intergenic | 50.0% |
| ! | TGCTTTTGACGGAGATACCG+AGG | - | chr7.3:21664276-21664295 | MS.gene41834:CDS | 50.0% |
| !! | GGCTTTAGAGGTGTCTGCAA+CGG | + | chr7.3:21664711-21664730 | None:intergenic | 50.0% |
| !! | GGTTCTGGAGTGATTGGAAG+AGG | + | chr7.3:21664155-21664174 | None:intergenic | 50.0% |
| !! | TACAGATGGTGCTGCTGATG+TGG | - | chr7.3:21666411-21666430 | MS.gene41834:intron | 50.0% |
| !! | TTGGTGACTTGCTCTTCCTG+TGG | + | chr7.3:21667925-21667944 | None:intergenic | 50.0% |
| AACTTGACGAACCGGGGAGT+GGG | + | chr7.3:21664247-21664266 | None:intergenic | 55.0% | |
| ATGGCCGGAATGTGGGAGTT+CGG | + | chr7.3:21664105-21664124 | None:intergenic | 55.0% | |
| CCGAACCGGTGGGATTTAAG+TGG | + | chr7.3:21664217-21664236 | None:intergenic | 55.0% | |
| CCGCCTCTTACGTCCATCAA+TGG | - | chr7.3:21667852-21667871 | MS.gene41834:CDS | 55.0% | |
| CGACAGAGATCGCCTATCAC+TGG | - | chr7.3:21666696-21666715 | MS.gene41834:intron | 55.0% | |
| CTCACTTGGAGTTGAGCCAG+TGG | - | chr7.3:21666873-21666892 | MS.gene41834:intron | 55.0% | |
| GAATGTGGGAGTTCGGAGGA+CGG | + | chr7.3:21664098-21664117 | None:intergenic | 55.0% | |
| GATCAAGGTGGAGACAGAGG+GGG | - | chr7.3:21666792-21666811 | MS.gene41834:intron | 55.0% | |
| GCTTCTTGTTCCGGCTTTGC+AGG | + | chr7.3:21667901-21667920 | None:intergenic | 55.0% | |
| GGAGTGATTGGAAGAGGTGG+CGG | + | chr7.3:21664149-21664168 | None:intergenic | 55.0% | |
| GGGAATTGAACCGAACCGGT+GGG | + | chr7.3:21664227-21664246 | None:intergenic | 55.0% | |
| GTTGAGCCAGTGGATACGGT+TGG | - | chr7.3:21666883-21666902 | MS.gene41834:intron | 55.0% | |
| TAACTTGACGAACCGGGGAG+TGG | + | chr7.3:21664248-21664267 | None:intergenic | 55.0% | |
| TCCTCCGAACTCCCACATTC+CGG | - | chr7.3:21664098-21664117 | MS.gene41834:CDS | 55.0% | |
| TCGGTTCAATTCCCACTCCC+CGG | - | chr7.3:21664233-21664252 | MS.gene41834:CDS | 55.0% | |
| TGGGAATTGAACCGAACCGG+TGG | + | chr7.3:21664228-21664247 | None:intergenic | 55.0% | |
| ! | GACTCGTGATGCTAATGGGC+TGG | + | chr7.3:21665713-21665732 | None:intergenic | 55.0% |
| ! | GCTGATGTGGAGGAGAGTAC+AGG | - | chr7.3:21666424-21666443 | MS.gene41834:intron | 55.0% |
| ! | TTCACCCGAGGTTCAGGTTC+TGG | - | chr7.3:21664315-21664334 | MS.gene41834:intron | 55.0% |
| !! | AGATGGTGCTGCTGATGTGG+AGG | - | chr7.3:21666414-21666433 | MS.gene41834:intron | 55.0% |
| !! | CGGTGTCGCAACTGCAATTG+CGG | + | chr7.3:21664691-21664710 | None:intergenic | 55.0% |
| !! | GCGTGAGGTTCTGGAGTGAT+TGG | + | chr7.3:21664161-21664180 | None:intergenic | 55.0% |
| !! | GTGAAGGTATCAGCTGGTCC+AGG | - | chr7.3:21667874-21667893 | MS.gene41834:CDS | 55.0% |
| !! | TGATGCTAATGGGCTGGCGT+TGG | + | chr7.3:21665707-21665726 | None:intergenic | 55.0% |
| GACGGAAACGCGTGAGGTTC+TGG | + | chr7.3:21664170-21664189 | None:intergenic | 60.0% | |
| GATGATGAGGTCAGCGACGC+TGG | - | chr7.3:21666448-21666467 | MS.gene41834:intron | 60.0% | |
| GTGGTGAGAAGGGTTGGGGA+TGG | + | chr7.3:21664124-21664143 | None:intergenic | 60.0% | |
| GTTGGGGATGGCCGGAATGT+GGG | + | chr7.3:21664112-21664131 | None:intergenic | 60.0% | |
| TGAGAAGGGTTGGGGATGGC+CGG | + | chr7.3:21664120-21664139 | None:intergenic | 60.0% | |
| TGGTCCAGGACCTGCAAAGC+CGG | - | chr7.3:21667888-21667907 | MS.gene41834:CDS | 60.0% | |
| TGTTCCGGCTTTGCAGGTCC+TGG | + | chr7.3:21667895-21667914 | None:intergenic | 60.0% | |
| ! | ATGCAGGGGCGCAAACCAGT+TGG | - | chr7.3:21667329-21667348 | MS.gene41834:intron | 60.0% |
| ! | GTGATTGGAAGAGGTGGCGG+CGG | + | chr7.3:21664146-21664165 | None:intergenic | 60.0% |
| !! | GCCGGAACAAGAAGCACCAC+AGG | - | chr7.3:21667906-21667925 | MS.gene41834:CDS | 60.0% |
| CAAGGTGGAGACAGAGGGGG+AGG | - | chr7.3:21666795-21666814 | MS.gene41834:intron | 65.0% | |
| CGGCGGTGGTGAGAAGGGTT+GGG | + | chr7.3:21664129-21664148 | None:intergenic | 65.0% | |
| GCCGGAATGTGGGAGTTCGG+AGG | + | chr7.3:21664102-21664121 | None:intergenic | 65.0% | |
| GGATGCGACGGAAACGCGTG+AGG | + | chr7.3:21664176-21664195 | None:intergenic | 65.0% | |
| GGCGGTGGTGAGAAGGGTTG+GGG | + | chr7.3:21664128-21664147 | None:intergenic | 65.0% | |
| GGTTGGGGATGGCCGGAATG+TGG | + | chr7.3:21664113-21664132 | None:intergenic | 65.0% | |
| TGTGGGAGTTCGGAGGACGG+TGG | + | chr7.3:21664095-21664114 | None:intergenic | 65.0% | |
| ! | ATTGGAAGAGGTGGCGGCGG+TGG | + | chr7.3:21664143-21664162 | None:intergenic | 65.0% |
| GCGGCGGTGGTGAGAAGGGT+TGG | + | chr7.3:21664130-21664149 | None:intergenic | 70.0% | |
| ! | AGGTGGCGGCGGTGGTGAGA+AGG | + | chr7.3:21664135-21664154 | None:intergenic | 70.0% |
| ! | GGTGGCGGCGGTGGTGAGAA+GGG | + | chr7.3:21664134-21664153 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 21664088 | 21668002 | 21664088 | ID=MS.gene41834 |
| chr7.3 | mRNA | 21664088 | 21668002 | 21664088 | ID=MS.gene41834.t1;Parent=MS.gene41834 |
| chr7.3 | exon | 21667754 | 21668002 | 21667754 | ID=MS.gene41834.t1.exon1;Parent=MS.gene41834.t1 |
| chr7.3 | CDS | 21667754 | 21668002 | 21667754 | ID=cds.MS.gene41834.t1;Parent=MS.gene41834.t1 |
| chr7.3 | exon | 21665166 | 21665684 | 21665166 | ID=MS.gene41834.t1.exon2;Parent=MS.gene41834.t1 |
| chr7.3 | CDS | 21665166 | 21665684 | 21665166 | ID=cds.MS.gene41834.t1;Parent=MS.gene41834.t1 |
| chr7.3 | exon | 21664088 | 21664327 | 21664088 | ID=MS.gene41834.t1.exon3;Parent=MS.gene41834.t1 |
| chr7.3 | CDS | 21664088 | 21664327 | 21664088 | ID=cds.MS.gene41834.t1;Parent=MS.gene41834.t1 |
| Gene Sequence |
| Protein sequence |
