Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50781.t1 | RHN58862.1 | 97 | 237 | 7 | 0 | 1 | 237 | 77 | 313 | 8.90E-129 | 469.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50781.t1 | Q8H7F6 | 71.7 | 233 | 60 | 1 | 2 | 234 | 65 | 291 | 3.1e-98 | 359.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50781.t1 | G7JQ42 | 97.0 | 237 | 7 | 0 | 1 | 237 | 61 | 297 | 6.4e-129 | 469.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049137 | MS.gene50781 | 0.861479 | 9.97E-64 | -1.69E-46 |
MS.gene049171 | MS.gene50781 | 0.855965 | 4.43E-62 | -1.69E-46 |
MS.gene049217 | MS.gene50781 | 0.829781 | 4.25E-55 | -1.69E-46 |
MS.gene049222 | MS.gene50781 | 0.874835 | 4.95E-68 | -1.69E-46 |
MS.gene049257 | MS.gene50781 | 0.804789 | 1.82E-49 | -1.69E-46 |
MS.gene049285 | MS.gene50781 | 0.848018 | 8.01E-60 | -1.69E-46 |
MS.gene049320 | MS.gene50781 | 0.824305 | 8.67E-54 | -1.69E-46 |
MS.gene049427 | MS.gene50781 | 0.803881 | 2.82E-49 | -1.69E-46 |
MS.gene049609 | MS.gene50781 | 0.847601 | 1.04E-59 | -1.69E-46 |
MS.gene049615 | MS.gene50781 | 0.850355 | 1.79E-60 | -1.69E-46 |
MS.gene049627 | MS.gene50781 | 0.842752 | 2.13E-58 | -1.69E-46 |
MS.gene049633 | MS.gene50781 | 0.804879 | 1.75E-49 | -1.69E-46 |
MS.gene049805 | MS.gene50781 | 0.844704 | 6.41E-59 | -1.69E-46 |
MS.gene05010 | MS.gene50781 | 0.818459 | 1.94E-52 | -1.69E-46 |
MS.gene050163 | MS.gene50781 | 0.828672 | 7.89E-55 | -1.69E-46 |
MS.gene050165 | MS.gene50781 | 0.802366 | 5.80E-49 | -1.69E-46 |
MS.gene050170 | MS.gene50781 | 0.822142 | 2.77E-53 | -1.69E-46 |
MS.gene050333 | MS.gene50781 | 0.811275 | 7.59E-51 | -1.69E-46 |
MS.gene050479 | MS.gene50781 | -0.823059 | 1.70E-53 | -1.69E-46 |
MS.gene050504 | MS.gene50781 | 0.846957 | 1.57E-59 | -1.69E-46 |
MS.gene050518 | MS.gene50781 | 0.835733 | 1.41E-56 | -1.69E-46 |
MS.gene050538 | MS.gene50781 | 0.849852 | 2.48E-60 | -1.69E-46 |
MS.gene050547 | MS.gene50781 | -0.827466 | 1.54E-54 | -1.69E-46 |
MS.gene050577 | MS.gene50781 | 0.874296 | 7.54E-68 | -1.69E-46 |
MS.gene050593 | MS.gene50781 | 0.845118 | 4.96E-59 | -1.69E-46 |
MS.gene050612 | MS.gene50781 | 0.826509 | 2.61E-54 | -1.69E-46 |
MS.gene050647 | MS.gene50781 | -0.813681 | 2.26E-51 | -1.69E-46 |
MS.gene050670 | MS.gene50781 | 0.80775 | 4.34E-50 | -1.69E-46 |
MS.gene050675 | MS.gene50781 | 0.822491 | 2.30E-53 | -1.69E-46 |
MS.gene050699 | MS.gene50781 | 0.85281 | 3.62E-61 | -1.69E-46 |
MS.gene050747 | MS.gene50781 | 0.914904 | 1.11E-84 | -1.69E-46 |
MS.gene050772 | MS.gene50781 | 0.843445 | 1.39E-58 | -1.69E-46 |
MS.gene050781 | MS.gene50781 | 0.842861 | 2.00E-58 | -1.69E-46 |
MS.gene05080 | MS.gene50781 | 0.835175 | 1.96E-56 | -1.69E-46 |
MS.gene050812 | MS.gene50781 | 0.809804 | 1.58E-50 | -1.69E-46 |
MS.gene05081 | MS.gene50781 | 0.826108 | 3.25E-54 | -1.69E-46 |
MS.gene050868 | MS.gene50781 | 0.825306 | 5.04E-54 | -1.69E-46 |
MS.gene050871 | MS.gene50781 | 0.823881 | 1.09E-53 | -1.69E-46 |
MS.gene050904 | MS.gene50781 | 0.823333 | 1.47E-53 | -1.69E-46 |
MS.gene050950 | MS.gene50781 | 0.904237 | 1.51E-79 | -1.69E-46 |
MS.gene050986 | MS.gene50781 | 0.816019 | 6.86E-52 | -1.69E-46 |
MS.gene05100 | MS.gene50781 | 0.822661 | 2.10E-53 | -1.69E-46 |
MS.gene051167 | MS.gene50781 | -0.811871 | 5.64E-51 | -1.69E-46 |
MS.gene051317 | MS.gene50781 | 0.811052 | 8.49E-51 | -1.69E-46 |
MS.gene051387 | MS.gene50781 | 0.88302 | 6.39E-71 | -1.69E-46 |
MS.gene051525 | MS.gene50781 | 0.805241 | 1.47E-49 | -1.69E-46 |
MS.gene051551 | MS.gene50781 | 0.817224 | 3.68E-52 | -1.69E-46 |
MS.gene051666 | MS.gene50781 | 0.840205 | 1.00E-57 | -1.69E-46 |
MS.gene051694 | MS.gene50781 | 0.870224 | 1.71E-66 | -1.69E-46 |
MS.gene051838 | MS.gene50781 | 0.833085 | 6.53E-56 | -1.69E-46 |
MS.gene052015 | MS.gene50781 | -0.812129 | 4.95E-51 | -1.69E-46 |
MS.gene052164 | MS.gene50781 | 0.842031 | 3.31E-58 | -1.69E-46 |
MS.gene052421 | MS.gene50781 | 0.821101 | 4.83E-53 | -1.69E-46 |
MS.gene052482 | MS.gene50781 | 0.840737 | 7.26E-58 | -1.69E-46 |
MS.gene052486 | MS.gene50781 | 0.849861 | 2.46E-60 | -1.69E-46 |
MS.gene052501 | MS.gene50781 | 0.854873 | 9.21E-62 | -1.69E-46 |
MS.gene052503 | MS.gene50781 | 0.862774 | 3.99E-64 | -1.69E-46 |
MS.gene052505 | MS.gene50781 | 0.851598 | 8.00E-61 | -1.69E-46 |
MS.gene052506 | MS.gene50781 | 0.811128 | 8.17E-51 | -1.69E-46 |
MS.gene052615 | MS.gene50781 | 0.845869 | 3.10E-59 | -1.69E-46 |
MS.gene052670 | MS.gene50781 | 0.805696 | 1.18E-49 | -1.69E-46 |
MS.gene052823 | MS.gene50781 | 0.86321 | 2.93E-64 | -1.69E-46 |
MS.gene052825 | MS.gene50781 | 0.863972 | 1.70E-64 | -1.69E-46 |
MS.gene052966 | MS.gene50781 | 0.82205 | 2.91E-53 | -1.69E-46 |
MS.gene052982 | MS.gene50781 | 0.849893 | 2.41E-60 | -1.69E-46 |
MS.gene053107 | MS.gene50781 | 0.852371 | 4.82E-61 | -1.69E-46 |
MS.gene053203 | MS.gene50781 | 0.874734 | 5.36E-68 | -1.69E-46 |
MS.gene053207 | MS.gene50781 | 0.84168 | 4.10E-58 | -1.69E-46 |
MS.gene053213 | MS.gene50781 | 0.872023 | 4.37E-67 | -1.69E-46 |
MS.gene053286 | MS.gene50781 | 0.869786 | 2.38E-66 | -1.69E-46 |
MS.gene053322 | MS.gene50781 | 0.800489 | 1.41E-48 | -1.69E-46 |
MS.gene053421 | MS.gene50781 | -0.818088 | 2.35E-52 | -1.69E-46 |
MS.gene053436 | MS.gene50781 | 0.893694 | 4.95E-75 | -1.69E-46 |
MS.gene053479 | MS.gene50781 | 0.824036 | 1.00E-53 | -1.69E-46 |
MS.gene053480 | MS.gene50781 | 0.816294 | 5.96E-52 | -1.69E-46 |
MS.gene053574 | MS.gene50781 | 0.863574 | 2.26E-64 | -1.69E-46 |
MS.gene053579 | MS.gene50781 | 0.875819 | 2.28E-68 | -1.69E-46 |
MS.gene053626 | MS.gene50781 | 0.861844 | 7.71E-64 | -1.69E-46 |
MS.gene053632 | MS.gene50781 | 0.830836 | 2.35E-55 | -1.69E-46 |
MS.gene053824 | MS.gene50781 | 0.834787 | 2.45E-56 | -1.69E-46 |
MS.gene054408 | MS.gene50781 | 0.871715 | 5.53E-67 | -1.69E-46 |
MS.gene054595 | MS.gene50781 | 0.867604 | 1.21E-65 | -1.69E-46 |
MS.gene054600 | MS.gene50781 | 0.843373 | 1.46E-58 | -1.69E-46 |
MS.gene054642 | MS.gene50781 | 0.82926 | 5.69E-55 | -1.69E-46 |
MS.gene054706 | MS.gene50781 | -0.819481 | 1.14E-52 | -1.69E-46 |
MS.gene05470 | MS.gene50781 | 0.839797 | 1.28E-57 | -1.69E-46 |
MS.gene054927 | MS.gene50781 | 0.866557 | 2.61E-65 | -1.69E-46 |
MS.gene054954 | MS.gene50781 | 0.822674 | 2.09E-53 | -1.69E-46 |
MS.gene05505 | MS.gene50781 | 0.809153 | 2.18E-50 | -1.69E-46 |
MS.gene055206 | MS.gene50781 | 0.818023 | 2.43E-52 | -1.69E-46 |
MS.gene055224 | MS.gene50781 | 0.819105 | 1.38E-52 | -1.69E-46 |
MS.gene055289 | MS.gene50781 | 0.828538 | 8.50E-55 | -1.69E-46 |
MS.gene055362 | MS.gene50781 | 0.848102 | 7.59E-60 | -1.69E-46 |
MS.gene055502 | MS.gene50781 | 0.870577 | 1.31E-66 | -1.69E-46 |
MS.gene055577 | MS.gene50781 | 0.856059 | 4.16E-62 | -1.69E-46 |
MS.gene055748 | MS.gene50781 | 0.836356 | 9.82E-57 | -1.69E-46 |
MS.gene055750 | MS.gene50781 | 0.829607 | 4.68E-55 | -1.69E-46 |
MS.gene055751 | MS.gene50781 | 0.811369 | 7.25E-51 | -1.69E-46 |
MS.gene05589 | MS.gene50781 | 0.81544 | 9.23E-52 | -1.69E-46 |
MS.gene055941 | MS.gene50781 | 0.833981 | 3.90E-56 | -1.69E-46 |
MS.gene056040 | MS.gene50781 | 0.899429 | 2.00E-77 | -1.69E-46 |
MS.gene056083 | MS.gene50781 | 0.806123 | 9.58E-50 | -1.69E-46 |
MS.gene056166 | MS.gene50781 | 0.835006 | 2.16E-56 | -1.69E-46 |
MS.gene056218 | MS.gene50781 | -0.825074 | 5.71E-54 | -1.69E-46 |
MS.gene056409 | MS.gene50781 | 0.830599 | 2.68E-55 | -1.69E-46 |
MS.gene056446 | MS.gene50781 | 0.817127 | 3.87E-52 | -1.69E-46 |
MS.gene056450 | MS.gene50781 | 0.801925 | 7.15E-49 | -1.69E-46 |
MS.gene056504 | MS.gene50781 | 0.826286 | 2.95E-54 | -1.69E-46 |
MS.gene056510 | MS.gene50781 | 0.828716 | 7.70E-55 | -1.69E-46 |
MS.gene056610 | MS.gene50781 | 0.859301 | 4.55E-63 | -1.69E-46 |
MS.gene056647 | MS.gene50781 | -0.807118 | 5.91E-50 | -1.69E-46 |
MS.gene056657 | MS.gene50781 | 0.831273 | 1.83E-55 | -1.69E-46 |
MS.gene056692 | MS.gene50781 | 0.85199 | 6.19E-61 | -1.69E-46 |
MS.gene056877 | MS.gene50781 | 0.82429 | 8.74E-54 | -1.69E-46 |
MS.gene057011 | MS.gene50781 | 0.832601 | 8.61E-56 | -1.69E-46 |
MS.gene057146 | MS.gene50781 | 0.826028 | 3.40E-54 | -1.69E-46 |
MS.gene057332 | MS.gene50781 | 0.804955 | 1.69E-49 | -1.69E-46 |
MS.gene057416 | MS.gene50781 | 0.86511 | 7.49E-65 | -1.69E-46 |
MS.gene057658 | MS.gene50781 | 0.861504 | 9.79E-64 | -1.69E-46 |
MS.gene057831 | MS.gene50781 | 0.897441 | 1.40E-76 | -1.69E-46 |
MS.gene05787 | MS.gene50781 | 0.842057 | 3.26E-58 | -1.69E-46 |
MS.gene058019 | MS.gene50781 | 0.856641 | 2.80E-62 | -1.69E-46 |
MS.gene058130 | MS.gene50781 | 0.826999 | 1.99E-54 | -1.69E-46 |
MS.gene058157 | MS.gene50781 | 0.804827 | 1.79E-49 | -1.69E-46 |
MS.gene058323 | MS.gene50781 | 0.821366 | 4.19E-53 | -1.69E-46 |
MS.gene058338 | MS.gene50781 | 0.828954 | 6.74E-55 | -1.69E-46 |
MS.gene05837 | MS.gene50781 | 0.89097 | 6.08E-74 | -1.69E-46 |
MS.gene058419 | MS.gene50781 | 0.84833 | 6.56E-60 | -1.69E-46 |
MS.gene058544 | MS.gene50781 | 0.894029 | 3.62E-75 | -1.69E-46 |
MS.gene058700 | MS.gene50781 | 0.835545 | 1.58E-56 | -1.69E-46 |
MS.gene058773 | MS.gene50781 | 0.827687 | 1.36E-54 | -1.69E-46 |
MS.gene058838 | MS.gene50781 | 0.847782 | 9.30E-60 | -1.69E-46 |
MS.gene05883 | MS.gene50781 | 0.858898 | 6.00E-63 | -1.69E-46 |
MS.gene059022 | MS.gene50781 | 0.826254 | 3.00E-54 | -1.69E-46 |
MS.gene059023 | MS.gene50781 | 0.880305 | 6.13E-70 | -1.69E-46 |
MS.gene059103 | MS.gene50781 | -0.833284 | 5.82E-56 | -1.69E-46 |
MS.gene05914 | MS.gene50781 | 0.826614 | 2.46E-54 | -1.69E-46 |
MS.gene059303 | MS.gene50781 | 0.817997 | 2.47E-52 | -1.69E-46 |
MS.gene05934 | MS.gene50781 | 0.838244 | 3.23E-57 | -1.69E-46 |
MS.gene059367 | MS.gene50781 | 0.810319 | 1.22E-50 | -1.69E-46 |
MS.gene059480 | MS.gene50781 | -0.833397 | 5.46E-56 | -1.69E-46 |
MS.gene059526 | MS.gene50781 | -0.802057 | 6.72E-49 | -1.69E-46 |
MS.gene059536 | MS.gene50781 | 0.811084 | 8.35E-51 | -1.69E-46 |
MS.gene059667 | MS.gene50781 | 0.83085 | 2.33E-55 | -1.69E-46 |
MS.gene059677 | MS.gene50781 | 0.839541 | 1.49E-57 | -1.69E-46 |
MS.gene059718 | MS.gene50781 | 0.861458 | 1.01E-63 | -1.69E-46 |
MS.gene059756 | MS.gene50781 | 0.859251 | 4.71E-63 | -1.69E-46 |
MS.gene059801 | MS.gene50781 | 0.828665 | 7.92E-55 | -1.69E-46 |
MS.gene059902 | MS.gene50781 | 0.800477 | 1.42E-48 | -1.69E-46 |
MS.gene059960 | MS.gene50781 | 0.808561 | 2.91E-50 | -1.69E-46 |
MS.gene06000 | MS.gene50781 | 0.817742 | 2.82E-52 | -1.69E-46 |
MS.gene060762 | MS.gene50781 | 0.827827 | 1.26E-54 | -1.69E-46 |
MS.gene06077 | MS.gene50781 | 0.879179 | 1.54E-69 | -1.69E-46 |
MS.gene060835 | MS.gene50781 | 0.830501 | 2.83E-55 | -1.69E-46 |
MS.gene06092 | MS.gene50781 | 0.901318 | 3.02E-78 | -1.69E-46 |
MS.gene060982 | MS.gene50781 | 0.818143 | 2.29E-52 | -1.69E-46 |
MS.gene061150 | MS.gene50781 | 0.874014 | 9.40E-68 | -1.69E-46 |
MS.gene061200 | MS.gene50781 | 0.82122 | 4.53E-53 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50781.t1 | MTR_4g016930 | 97.046 | 237 | 7 | 0 | 1 | 237 | 61 | 297 | 1.06e-170 | 472 |
MS.gene50781.t1 | MTR_7g079520 | 41.860 | 129 | 71 | 2 | 110 | 237 | 52 | 177 | 9.51e-30 | 109 |
MS.gene50781.t1 | MTR_4g088905 | 47.368 | 114 | 53 | 2 | 123 | 236 | 147 | 253 | 2.81e-26 | 106 |
MS.gene50781.t1 | MTR_4g088905 | 35.152 | 165 | 88 | 7 | 73 | 231 | 334 | 485 | 4.98e-22 | 94.4 |
MS.gene50781.t1 | MTR_4g088905 | 40.385 | 104 | 59 | 1 | 128 | 231 | 277 | 377 | 6.30e-20 | 88.2 |
MS.gene50781.t1 | MTR_2g103130 | 35.417 | 96 | 59 | 1 | 136 | 231 | 55 | 147 | 3.58e-18 | 79.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50781.t1 | AT2G38270 | 71.368 | 234 | 61 | 1 | 2 | 235 | 65 | 292 | 1.10e-127 | 363 |
MS.gene50781.t1 | AT3G54900 | 44.828 | 116 | 57 | 2 | 120 | 231 | 51 | 163 | 3.04e-28 | 105 |
MS.gene50781.t1 | AT4G04950 | 41.935 | 124 | 56 | 2 | 113 | 236 | 143 | 250 | 1.30e-23 | 99.0 |
MS.gene50781.t1 | AT4G04950 | 41.667 | 96 | 53 | 1 | 136 | 231 | 390 | 482 | 6.66e-21 | 91.3 |
MS.gene50781.t1 | AT4G04950 | 40.000 | 100 | 57 | 1 | 132 | 231 | 279 | 375 | 1.93e-17 | 81.3 |
MS.gene50781.t1 | AT3G15660 | 38.384 | 99 | 58 | 1 | 133 | 231 | 62 | 157 | 3.61e-20 | 84.7 |
MS.gene50781.t1 | AT3G15660 | 38.384 | 99 | 58 | 1 | 133 | 231 | 62 | 157 | 3.61e-20 | 84.7 |
Find 71 sgRNAs with CRISPR-Local
Find 470 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCACATAACGGCGCACTTC+TGG | 0.276069 | 4.1:-80517367 | None:intergenic |
TTGGATGAAGATTATAACTA+TGG | 0.276665 | 4.1:+80517453 | MS.gene50781:CDS |
TCTTACCCAAGTGGCGTTTC+CGG | 0.280532 | 4.1:-80517217 | None:intergenic |
GCGTTTCCGGATTCATTTCC+AGG | 0.302092 | 4.1:-80517204 | None:intergenic |
CAAGTTGGTAAAAGAGAATA+AGG | 0.302408 | 4.1:+80517323 | MS.gene50781:CDS |
AAAGCTCCGGCACCGATTTC+CGG | 0.327461 | 4.1:-80512017 | None:intergenic |
CGAAGATCAGCCTTCTTCTT+AGG | 0.340552 | 4.1:-80517246 | None:intergenic |
GGATTCTCTCAGAGGGTAAT+AGG | 0.345382 | 4.1:+80517387 | MS.gene50781:CDS |
CCATCCAAGACTTCCATGCT+TGG | 0.410922 | 4.1:-80517149 | None:intergenic |
TGTCTCGGCGCACCGGAAAT+CGG | 0.419054 | 4.1:+80512005 | MS.gene50781:CDS |
TGGGTCAAAGATTCTCTGTC+AGG | 0.419390 | 4.1:-80517129 | None:intergenic |
GGAGCTTTGTGGCTCTGTTA+AGG | 0.426111 | 4.1:+80512032 | MS.gene50781:CDS |
TACTATATAGGTTGGGGTAG+TGG | 0.427837 | 4.1:+80517101 | MS.gene50781:intron |
AAATCGGTGCCGGAGCTTTG+TGG | 0.430690 | 4.1:+80512021 | MS.gene50781:CDS |
CATCCAAGACTTCCATGCTT+GGG | 0.448569 | 4.1:-80517148 | None:intergenic |
TGACCCAAGCATGGAAGTCT+TGG | 0.456099 | 4.1:+80517145 | MS.gene50781:CDS |
CTCACCGTTCTTATCATAAA+CGG | 0.466803 | 4.1:-80511944 | None:intergenic |
GGTAATAGGCATTCTTGAAA+AGG | 0.467989 | 4.1:+80517401 | MS.gene50781:CDS |
GAAGAACTTCCGTCGGGTGC+CGG | 0.476879 | 4.1:+80511913 | MS.gene50781:CDS |
TCAGCCTTCTTCTTAGGCTG+TGG | 0.482968 | 4.1:-80517240 | None:intergenic |
TTGACCTCCATGTTTGAGAA+AGG | 0.485069 | 4.1:+80517564 | MS.gene50781:CDS |
AAGATTATAACTATGGATTG+AGG | 0.490227 | 4.1:+80517460 | MS.gene50781:CDS |
TTATGAGAGTGTAGATGTAT+TGG | 0.491403 | 4.1:+80517434 | MS.gene50781:CDS |
GTTCCACCTGGAAATGAATC+CGG | 0.492241 | 4.1:+80517198 | MS.gene50781:CDS |
CACTTCACCTTTCTCAAACA+TGG | 0.492756 | 4.1:-80517571 | None:intergenic |
CTGCTACTGTCTCGGCGCAC+CGG | 0.499962 | 4.1:+80511998 | MS.gene50781:CDS |
AACGGTGAGCTTCAGTTCAT+CGG | 0.500069 | 4.1:+80511958 | MS.gene50781:CDS |
TCCAGAAGTGCGCCGTTATG+TGG | 0.500421 | 4.1:+80517366 | MS.gene50781:CDS |
ATCATAAACGGCGTAAACTC+CGG | 0.503980 | 4.1:-80511932 | None:intergenic |
AGATTATAACTATGGATTGA+GGG | 0.506926 | 4.1:+80517461 | MS.gene50781:CDS |
GGCGCACCGGAAATCGGTGC+CGG | 0.507304 | 4.1:+80512011 | MS.gene50781:CDS |
CACCGTCACCGGTGAAGTAT+CGG | 0.509355 | 4.1:-80511863 | None:intergenic |
TTGAATGGTGAACTTGTTGG+TGG | 0.513486 | 4.1:+80517531 | MS.gene50781:CDS |
TTCACCGGTGACGGTGTCAC+CGG | 0.514381 | 4.1:+80511870 | MS.gene50781:CDS |
CGCCGATACTTCACCGGTGA+CGG | 0.522467 | 4.1:+80511861 | MS.gene50781:CDS |
ATGAATCCGGAAACGCCACT+TGG | 0.525120 | 4.1:+80517211 | MS.gene50781:CDS |
TAATATTGCTGCTACTGTCT+CGG | 0.529918 | 4.1:+80511990 | MS.gene50781:CDS |
ACCCGACGGAAGTTCTTCTC+CGG | 0.545914 | 4.1:-80511908 | None:intergenic |
TGAAGAGCTCGTGGACAAGT+TGG | 0.551751 | 4.1:+80517308 | MS.gene50781:CDS |
TAAGGTAGTTGCATTCATCA+AGG | 0.556799 | 4.1:+80517341 | MS.gene50781:CDS |
TTAACAGAGCCACAAAGCTC+CGG | 0.559023 | 4.1:-80512030 | None:intergenic |
TTTGAGAAAGGTGAAGTGGC+TGG | 0.570458 | 4.1:+80517576 | MS.gene50781:CDS |
CCAAGCATGGAAGTCTTGGA+TGG | 0.573626 | 4.1:+80517149 | MS.gene50781:CDS |
GTTAGTTGCACGTGACGACC+AGG | 0.575913 | 4.1:-80517276 | None:intergenic |
AAGACCACAGCCTAAGAAGA+AGG | 0.577244 | 4.1:+80517236 | MS.gene50781:CDS |
ACCGGAGAAGAACTTCCGTC+GGG | 0.581537 | 4.1:+80511907 | MS.gene50781:CDS |
GAGAATCTTTGACCCAAGCA+TGG | 0.586957 | 4.1:+80517136 | MS.gene50781:CDS |
CGTCCCTCTTGAAGAGCTCG+TGG | 0.588084 | 4.1:+80517299 | MS.gene50781:CDS |
CACGAGCTCTTCAAGAGGGA+CGG | 0.589016 | 4.1:-80517298 | None:intergenic |
AAGAACACATAAAGATCAGT+GGG | 0.590962 | 4.1:+80517172 | MS.gene50781:CDS |
AAACCTCGCCGATACTTCAC+CGG | 0.596159 | 4.1:+80511855 | MS.gene50781:CDS |
ATCAGTGGGAAAGTTCCACC+TGG | 0.600855 | 4.1:+80517186 | MS.gene50781:CDS |
CGTTATGTGGATTCTCTCAG+AGG | 0.601281 | 4.1:+80517379 | MS.gene50781:CDS |
GAAGAACACATAAAGATCAG+TGG | 0.602390 | 4.1:+80517171 | MS.gene50781:CDS |
ATAGGCATTCTTGAAAAGGA+AGG | 0.610176 | 4.1:+80517405 | MS.gene50781:CDS |
CTCTGAGAGAATCCACATAA+CGG | 0.611300 | 4.1:-80517378 | None:intergenic |
TTGTCCACGAGCTCTTCAAG+AGG | 0.611733 | 4.1:-80517303 | None:intergenic |
TGAATCCGGAAACGCCACTT+GGG | 0.613599 | 4.1:+80517212 | MS.gene50781:CDS |
AAGGTAGTTGCATTCATCAA+GGG | 0.614128 | 4.1:+80517342 | MS.gene50781:CDS |
CCGGAAAACGATGAAGTCAC+CGG | 0.615159 | 4.1:+80511889 | MS.gene50781:CDS |
CACCGGAGAAGAACTTCCGT+CGG | 0.622393 | 4.1:+80511906 | MS.gene50781:CDS |
GCGTAAACTCCGGCACCCGA+CGG | 0.641123 | 4.1:-80511922 | None:intergenic |
GCTGATCTTCGATTAACACC+TGG | 0.649446 | 4.1:+80517258 | MS.gene50781:CDS |
TGTCCACGAGCTCTTCAAGA+GGG | 0.653430 | 4.1:-80517302 | None:intergenic |
TACGCCGTTTATGATAAGAA+CGG | 0.658415 | 4.1:+80511940 | MS.gene50781:CDS |
CATGTTTGAGAAAGGTGAAG+TGG | 0.660920 | 4.1:+80517572 | MS.gene50781:CDS |
GTTATGTGGATTCTCTCAGA+GGG | 0.661671 | 4.1:+80517380 | MS.gene50781:CDS |
TTTCCGGATTCATTTCCAGG+TGG | 0.667945 | 4.1:-80517201 | None:intergenic |
AGGCTGTGGTCTTACCCAAG+TGG | 0.670747 | 4.1:-80517226 | None:intergenic |
TTCACCTTTCTCAAACATGG+AGG | 0.696862 | 4.1:-80517568 | None:intergenic |
TCACCGGTGAAGTATCGGCG+AGG | 0.736402 | 4.1:-80511858 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAAAAAAAAATTTAA+CGG | - | chr4.1:80516983-80517002 | None:intergenic | 0.0% |
!! | TAAAAATAAAAAATAAAATA+TGG | - | chr4.1:80514776-80514795 | None:intergenic | 0.0% |
!!! | AAAAATTTAAAAAATATTTT+TGG | + | chr4.1:80514917-80514936 | MS.gene50781:intron | 0.0% |
!!! | TTTATTTTATATTTTTTTTT+GGG | + | chr4.1:80513833-80513852 | MS.gene50781:intron | 0.0% |
!!! | TTTTATTTTATATTTTTTTT+TGG | + | chr4.1:80513832-80513851 | MS.gene50781:intron | 0.0% |
!!! | TTTTTTTTTTAAAAAAATAT+TGG | - | chr4.1:80515412-80515431 | None:intergenic | 0.0% |
!! | AAAACAAAAAAAATTTATGA+GGG | - | chr4.1:80513718-80513737 | None:intergenic | 10.0% |
!! | AATCTAAAAAAAATAATTAC+AGG | - | chr4.1:80513692-80513711 | None:intergenic | 10.0% |
!! | ATCTAAAAAAAATAATTACA+GGG | - | chr4.1:80513691-80513710 | None:intergenic | 10.0% |
!! | TTAAAAAAATGAAAAAATTC+TGG | - | chr4.1:80514748-80514767 | None:intergenic | 10.0% |
!!! | AAAACAAAATAATTTTATGA+GGG | + | chr4.1:80515600-80515619 | MS.gene50781:intron | 10.0% |
!!! | AAGAAATTCATATTTTTTTT+CGG | - | chr4.1:80514662-80514681 | None:intergenic | 10.0% |
!!! | ATTTTTGTTTAAATCTTATA+AGG | - | chr4.1:80512243-80512262 | None:intergenic | 10.0% |
!!! | CTAAAAAATTTTTTTTACAT+GGG | + | chr4.1:80515629-80515648 | MS.gene50781:intron | 10.0% |
!!! | TATTTCCAAATTTTTTTTTT+GGG | + | chr4.1:80514420-80514439 | MS.gene50781:intron | 10.0% |
!!! | TCTAAAAAATTTTTTTTACA+TGG | + | chr4.1:80515628-80515647 | MS.gene50781:intron | 10.0% |
!!! | TTATTTCCAAATTTTTTTTT+TGG | + | chr4.1:80514419-80514438 | MS.gene50781:intron | 10.0% |
!! | AAATTCCCAAAAAAAAAATT+TGG | - | chr4.1:80514428-80514447 | None:intergenic | 15.0% |
!! | AAGTCTCTTAATATATTAAA+GGG | - | chr4.1:80515702-80515721 | None:intergenic | 15.0% |
!! | CAAAACAAAAAAAATTTATG+AGG | - | chr4.1:80513719-80513738 | None:intergenic | 15.0% |
!! | CTGAAAATATTAAAAAATTC+TGG | + | chr4.1:80513955-80513974 | MS.gene50781:intron | 15.0% |
!! | GAAACAAAAAAATAAGTTAA+GGG | + | chr4.1:80515248-80515267 | MS.gene50781:intron | 15.0% |
!! | GAAATCAAAAAATAAGTTAA+GGG | + | chr4.1:80515217-80515236 | MS.gene50781:intron | 15.0% |
!! | GTTTGATTGTTTATAAAATA+GGG | + | chr4.1:80513398-80513417 | MS.gene50781:intron | 15.0% |
!! | TAAAAATGAAAACAAAAATC+TGG | - | chr4.1:80514806-80514825 | None:intergenic | 15.0% |
!! | TAAAAATTGTGAAAAAATTC+TGG | + | chr4.1:80514250-80514269 | MS.gene50781:intron | 15.0% |
!! | TCTAAAAAAAATAATTACAG+GGG | - | chr4.1:80513690-80513709 | None:intergenic | 15.0% |
!! | TCTGAAAAAAATTAAAATTC+TGG | + | chr4.1:80514160-80514179 | MS.gene50781:intron | 15.0% |
!! | TGTTTGATTGTTTATAAAAT+AGG | + | chr4.1:80513397-80513416 | MS.gene50781:intron | 15.0% |
!!! | AAATTATTTTGTTTTGGTTT+TGG | - | chr4.1:80515595-80515614 | None:intergenic | 15.0% |
!!! | AATAACATTTTTAAGATTTC+CGG | - | chr4.1:80513311-80513330 | None:intergenic | 15.0% |
!!! | AATTTTTTTTGTTTTGGTTT+TGG | + | chr4.1:80513723-80513742 | MS.gene50781:intron | 15.0% |
!!! | ATATTGAGTTAATTTTGAAT+TGG | + | chr4.1:80512314-80512333 | MS.gene50781:intron | 15.0% |
!!! | CAAAACAAAATAATTTTATG+AGG | + | chr4.1:80515599-80515618 | MS.gene50781:intron | 15.0% |
!!! | CGAAATTTTAATTAAAATTC+TGG | + | chr4.1:80514197-80514216 | MS.gene50781:intron | 15.0% |
!!! | CTCATAAAATTATTTTGTTT+TGG | - | chr4.1:80515601-80515620 | None:intergenic | 15.0% |
!!! | CTCATAAATTTTTTTTGTTT+TGG | + | chr4.1:80513717-80513736 | MS.gene50781:intron | 15.0% |
!!! | GTGATACTTTATTTAATATA+GGG | + | chr4.1:80513617-80513636 | MS.gene50781:intron | 15.0% |
!!! | TTAAAAATGTTATTTCAAAC+AGG | + | chr4.1:80513317-80513336 | MS.gene50781:intron | 15.0% |
!! | AAGTTATTAACGTTACAATT+TGG | + | chr4.1:80514994-80515013 | MS.gene50781:intron | 20.0% |
!! | AAGTTATTAACGTTACAATT+TGG | - | chr4.1:80515013-80514994 | None:intergenic | 20.0% |
!! | AATTCAATGTAATAATGTGT+CGG | + | chr4.1:80512854-80512873 | MS.gene50781:intron | 20.0% |
!! | ATTGTAACGTTAATAACTTA+TGG | + | chr4.1:80515336-80515355 | MS.gene50781:intron | 20.0% |
!! | ATTGTAACGTTAATAACTTA+TGG | - | chr4.1:80515355-80515336 | None:intergenic | 20.0% |
!! | CGAAACAAAAAAATAAGTTA+AGG | + | chr4.1:80515247-80515266 | MS.gene50781:intron | 20.0% |
!! | CGAAATCAAAAAATAAGTTA+AGG | + | chr4.1:80515216-80515235 | MS.gene50781:intron | 20.0% |
!! | GAAACCAAAAATTAAGTTAA+GGG | - | chr4.1:80515081-80515100 | None:intergenic | 20.0% |
!! | GAAACCTAAAAATAAGTTAA+GGG | + | chr4.1:80515186-80515205 | MS.gene50781:intron | 20.0% |
!! | GAAGTCTCTTAATATATTAA+AGG | - | chr4.1:80515703-80515722 | None:intergenic | 20.0% |
!! | TAAAATCACATCCTTAATTT+CGG | + | chr4.1:80512481-80512500 | MS.gene50781:intron | 20.0% |
!! | TATTTATAAACCGAGAATAA+GGG | + | chr4.1:80514453-80514472 | MS.gene50781:intron | 20.0% |
!! | TCTGCTTATTATAAGAAAAT+GGG | + | chr4.1:80512977-80512996 | MS.gene50781:intron | 20.0% |
!! | TGTAATATACAAACAGTATT+TGG | + | chr4.1:80516945-80516964 | MS.gene50781:intron | 20.0% |
!! | TTGTAACGTTAATAACTTAT+GGG | + | chr4.1:80515337-80515356 | MS.gene50781:intron | 20.0% |
!! | TTGTAACGTTAATAACTTAT+GGG | - | chr4.1:80515356-80515337 | None:intergenic | 20.0% |
!!! | AAATACCTTTGAAAAGATAA+AGG | - | chr4.1:80515931-80515950 | None:intergenic | 20.0% |
!!! | AACGAAACTTTTAATAGTTA+AGG | + | chr4.1:80515276-80515295 | MS.gene50781:intron | 20.0% |
!!! | AACGAAACTTTTAATAGTTA+AGG | - | chr4.1:80515295-80515276 | None:intergenic | 20.0% |
!!! | AACTATTAAAAGTTTCGTTT+TGG | + | chr4.1:80515054-80515073 | MS.gene50781:intron | 20.0% |
!!! | AACTATTAAAAGTTTCGTTT+TGG | - | chr4.1:80515073-80515054 | None:intergenic | 20.0% |
!!! | ACGAAACTTTTAATAGTTAA+GGG | + | chr4.1:80515277-80515296 | MS.gene50781:intron | 20.0% |
!!! | ACGAAACTTTTAATAGTTAA+GGG | - | chr4.1:80515296-80515277 | None:intergenic | 20.0% |
!!! | ATGAATTTTTTTCCGTTATA+CGG | + | chr4.1:80514618-80514637 | MS.gene50781:intron | 20.0% |
!!! | CTTATTTTTTGATTTCGTTT+TGG | - | chr4.1:80515213-80515232 | None:intergenic | 20.0% |
!!! | CTTATTTTTTTGTTTCGTTT+TGG | - | chr4.1:80515244-80515263 | None:intergenic | 20.0% |
!!! | GGTGATACTTTATTTAATAT+AGG | + | chr4.1:80513616-80513635 | MS.gene50781:intron | 20.0% |
!!! | GTCATTTTTCGAATTATAAT+CGG | - | chr4.1:80512832-80512851 | None:intergenic | 20.0% |
!!! | TAATTGTTTAGAACAATTTG+TGG | + | chr4.1:80512140-80512159 | MS.gene50781:intron | 20.0% |
!!! | TTCCAAATTTTTTTCAATAC+CGG | - | chr4.1:80514694-80514713 | None:intergenic | 20.0% |
!!! | TTCTTTTATAGTCTTTCATA+AGG | + | chr4.1:80513187-80513206 | MS.gene50781:intron | 20.0% |
!!! | TTTGTAAATTTTATTGCAGT+AGG | + | chr4.1:80512383-80512402 | MS.gene50781:intron | 20.0% |
!!! | TTTTCATTAGTATTTTTTCC+AGG | + | chr4.1:80514538-80514557 | MS.gene50781:intron | 20.0% |
!!! | TTTTGGCTTAATTAATGATT+TGG | + | chr4.1:80514934-80514953 | MS.gene50781:intron | 20.0% |
! | AAAATCTCCAAAAGAAATTG+TGG | - | chr4.1:80516678-80516697 | None:intergenic | 25.0% |
! | AAAATGCAGAAAAAGACATA+TGG | - | chr4.1:80516901-80516920 | None:intergenic | 25.0% |
! | AAAGCTTCAAAACAATTCTA+GGG | - | chr4.1:80512657-80512676 | None:intergenic | 25.0% |
! | AAATCTCCAAAAGAAATTGT+GGG | - | chr4.1:80516677-80516696 | None:intergenic | 25.0% |
! | AAATGCAGAAAAAGACATAT+GGG | - | chr4.1:80516900-80516919 | None:intergenic | 25.0% |
! | AAATTGTCTACTATATAGGT+TGG | + | chr4.1:80517093-80517112 | MS.gene50781:intron | 25.0% |
! | AATTGAAAAGTCTCAAATCA+TGG | - | chr4.1:80516836-80516855 | None:intergenic | 25.0% |
! | AATTGTCTACTATATAGGTT+GGG | + | chr4.1:80517094-80517113 | MS.gene50781:intron | 25.0% |
! | AATTTGATCCAATTTCATTG+TGG | + | chr4.1:80512531-80512550 | MS.gene50781:intron | 25.0% |
! | ACAAAAAAAATTTATGAGGG+TGG | - | chr4.1:80513715-80513734 | None:intergenic | 25.0% |
! | ACAATGAAAAATTCATCATC+AGG | - | chr4.1:80517072-80517091 | None:intergenic | 25.0% |
! | ACTTCTTAAACACAATAAGT+GGG | + | chr4.1:80516593-80516612 | MS.gene50781:intron | 25.0% |
! | ACTTGTGTATTTCAAAATTG+AGG | - | chr4.1:80512364-80512383 | None:intergenic | 25.0% |
! | AGTAACTAAGTTTGTAGAAA+TGG | - | chr4.1:80512601-80512620 | None:intergenic | 25.0% |
! | ATCATCAGGAAAGTAATATT+TGG | - | chr4.1:80517058-80517077 | None:intergenic | 25.0% |
! | ATTTGATCCAATTTCATTGT+GGG | + | chr4.1:80512532-80512551 | MS.gene50781:intron | 25.0% |
! | CGAAACCAAAAATTAAGTTA+AGG | - | chr4.1:80515082-80515101 | None:intergenic | 25.0% |
! | CGAAACCTAAAAATAAGTTA+AGG | + | chr4.1:80515185-80515204 | MS.gene50781:intron | 25.0% |
! | CTCTGCTTATTATAAGAAAA+TGG | + | chr4.1:80512976-80512995 | MS.gene50781:intron | 25.0% |
! | CTGCTTATTATAAGAAAATG+GGG | + | chr4.1:80512978-80512997 | MS.gene50781:intron | 25.0% |
! | GAAACCAAAAAGTAACTTAA+GGG | + | chr4.1:80515308-80515327 | MS.gene50781:intron | 25.0% |
! | GAAACCAAAAAGTAACTTAA+GGG | - | chr4.1:80515327-80515308 | None:intergenic | 25.0% |
! | GAATATATATGCTTCAAAGA+TGG | + | chr4.1:80512933-80512952 | MS.gene50781:intron | 25.0% |
! | GTAACCAACAAATAACTTAA+GGG | + | chr4.1:80515368-80515387 | MS.gene50781:intron | 25.0% |
! | GTAACCAACAAATAACTTAA+GGG | - | chr4.1:80515387-80515368 | None:intergenic | 25.0% |
! | GTAACTAAGTTTGTAGAAAT+GGG | - | chr4.1:80512600-80512619 | None:intergenic | 25.0% |
! | GTATTTATAAACCGAGAATA+AGG | + | chr4.1:80514452-80514471 | MS.gene50781:intron | 25.0% |
! | TAATGGAAAGGATACTTATT+AGG | + | chr4.1:80513158-80513177 | MS.gene50781:intron | 25.0% |
! | TATATATATATGTCGAGCTT+AGG | + | chr4.1:80514382-80514401 | MS.gene50781:intron | 25.0% |
! | TATGAGTTAGAACCAAAATT+TGG | - | chr4.1:80513438-80513457 | None:intergenic | 25.0% |
! | TCATAAGGAAAGGAAATAAT+TGG | + | chr4.1:80513202-80513221 | MS.gene50781:intron | 25.0% |
! | TGTAACCAACAAATAACTTA+AGG | + | chr4.1:80515367-80515386 | MS.gene50781:intron | 25.0% |
! | TGTAACCAACAAATAACTTA+AGG | - | chr4.1:80515386-80515367 | None:intergenic | 25.0% |
! | TGTGAAATTGTCTACTATAT+AGG | + | chr4.1:80517089-80517108 | MS.gene50781:intron | 25.0% |
! | TGTTACAATGTTATTCTTGA+TGG | + | chr4.1:80513279-80513298 | MS.gene50781:intron | 25.0% |
! | TGTTTGTATATTACATCTGT+AGG | - | chr4.1:80516940-80516959 | None:intergenic | 25.0% |
! | TTATAGTCTTTCATAAGGAA+AGG | + | chr4.1:80513192-80513211 | MS.gene50781:intron | 25.0% |
! | TTCATGATTAACATTGGATA+GGG | + | chr4.1:80515720-80515739 | MS.gene50781:intron | 25.0% |
! | TTGGATGAAGATTATAACTA+TGG | + | chr4.1:80517453-80517472 | MS.gene50781:CDS | 25.0% |
! | TTGGTTACTCAATTGTAAAT+TGG | + | chr4.1:80512430-80512449 | MS.gene50781:intron | 25.0% |
!! | AAAAGACAAATGCCAAATTT+TGG | + | chr4.1:80513423-80513442 | MS.gene50781:intron | 25.0% |
!! | AAGATTATAACTATGGATTG+AGG | + | chr4.1:80517460-80517479 | MS.gene50781:CDS | 25.0% |
!! | ACAAAATAATTTTATGAGGG+TGG | + | chr4.1:80515603-80515622 | MS.gene50781:intron | 25.0% |
!! | AGATTATAACTATGGATTGA+GGG | + | chr4.1:80517461-80517480 | MS.gene50781:CDS | 25.0% |
!! | ATATGATGATAGTTTGAAGT+TGG | + | chr4.1:80513459-80513478 | MS.gene50781:intron | 25.0% |
!! | CACTTAAAAAGTATAGCAAT+TGG | + | chr4.1:80517487-80517506 | MS.gene50781:CDS | 25.0% |
!! | CATTTTCTTATAATAAGCAG+AGG | - | chr4.1:80512978-80512997 | None:intergenic | 25.0% |
!! | GTATAATAGTCTTAAAGAGT+TGG | + | chr4.1:80512411-80512430 | MS.gene50781:intron | 25.0% |
!! | GTGAAAAGTTTGCTTTAATT+TGG | + | chr4.1:80515972-80515991 | MS.gene50781:intron | 25.0% |
!! | TTTGAAGCATATATATTCCT+CGG | - | chr4.1:80512931-80512950 | None:intergenic | 25.0% |
!!! | AAGTTCATTTTTTACGATGA+AGG | + | chr4.1:80513009-80513028 | MS.gene50781:intron | 25.0% |
!!! | AGTTTTGAATTGAAGTGTTA+TGG | + | chr4.1:80512065-80512084 | MS.gene50781:intron | 25.0% |
!!! | CATATTTTTTCCCTTATTCT+CGG | - | chr4.1:80514466-80514485 | None:intergenic | 25.0% |
!!! | CTTAATTTTTGGTTTCGTTT+TGG | + | chr4.1:80515085-80515104 | MS.gene50781:intron | 25.0% |
!!! | CTTATTTTTAGGTTTCGTTT+TGG | - | chr4.1:80515182-80515201 | None:intergenic | 25.0% |
!!! | GTTATTTGTTGGTTACATTT+TGG | + | chr4.1:80514965-80514984 | MS.gene50781:intron | 25.0% |
!!! | GTTATTTGTTGGTTACATTT+TGG | - | chr4.1:80514984-80514965 | None:intergenic | 25.0% |
!!! | TAGAATTGTTTTGAAGCTTT+GGG | + | chr4.1:80512657-80512676 | MS.gene50781:intron | 25.0% |
!!! | TATTGGCTTAATTACTCTTT+TGG | - | chr4.1:80515395-80515414 | None:intergenic | 25.0% |
!!! | TCCAAATTTTTTTCAATACC+GGG | - | chr4.1:80514693-80514712 | None:intergenic | 25.0% |
!!! | TGAATTTCTTTCATTTTTCC+CGG | + | chr4.1:80514672-80514691 | MS.gene50781:intron | 25.0% |
!!! | TTTTTAGCCCATGTAATATA+GGG | - | chr4.1:80515670-80515689 | None:intergenic | 25.0% |
AAAAATATCTGAGGGAATGT+AGG | - | chr4.1:80517513-80517532 | None:intergenic | 30.0% | |
AAGAACACATAAAGATCAGT+GGG | + | chr4.1:80517172-80517191 | MS.gene50781:CDS | 30.0% | |
AAGCTTCAAAACAATTCTAG+GGG | - | chr4.1:80512656-80512675 | None:intergenic | 30.0% | |
AAGGTCTATATCATCATTAC+CGG | + | chr4.1:80513516-80513535 | MS.gene50781:intron | 30.0% | |
ACACAATACATATTCAACAC+CGG | + | chr4.1:80512894-80512913 | MS.gene50781:intron | 30.0% | |
AGAGACTTCATGATTAACAT+TGG | + | chr4.1:80515714-80515733 | MS.gene50781:intron | 30.0% | |
ATACACAAAAAACCTAAGCT+CGG | - | chr4.1:80514501-80514520 | None:intergenic | 30.0% | |
ATATATGCTTCAAAGATGGA+AGG | + | chr4.1:80512937-80512956 | MS.gene50781:intron | 30.0% | |
ATGACAAAACTCCGAAATTA+AGG | - | chr4.1:80512495-80512514 | None:intergenic | 30.0% | |
ATTGTCTACTATATAGGTTG+GGG | + | chr4.1:80517095-80517114 | MS.gene50781:intron | 30.0% | |
CAAAGCTTCAAAACAATTCT+AGG | - | chr4.1:80512658-80512677 | None:intergenic | 30.0% | |
CACCATTCAAAAATATCTGA+GGG | - | chr4.1:80517521-80517540 | None:intergenic | 30.0% | |
CAGGAATAGTAATTGAAACA+TGG | + | chr4.1:80513336-80513355 | MS.gene50781:intron | 30.0% | |
CATATATATTCCTCGGATTA+GGG | - | chr4.1:80512924-80512943 | None:intergenic | 30.0% | |
CCATCAACATTTATTCTAAG+AGG | - | chr4.1:80512757-80512776 | None:intergenic | 30.0% | |
CCTCTTAGAATAAATGTTGA+TGG | + | chr4.1:80512754-80512773 | MS.gene50781:intron | 30.0% | |
CGAAACCAAAAAGTAACTTA+AGG | + | chr4.1:80515307-80515326 | MS.gene50781:intron | 30.0% | |
CGAAACCAAAAAGTAACTTA+AGG | - | chr4.1:80515326-80515307 | None:intergenic | 30.0% | |
CTTCATGATTAACATTGGAT+AGG | + | chr4.1:80515719-80515738 | MS.gene50781:intron | 30.0% | |
GACTTCTTAAACACAATAAG+TGG | + | chr4.1:80516592-80516611 | MS.gene50781:intron | 30.0% | |
GATGAATGTATTAGCGTTAA+GGG | + | chr4.1:80515155-80515174 | MS.gene50781:intron | 30.0% | |
GATGGAAGGAAAAGAAAAAA+TGG | + | chr4.1:80512951-80512970 | MS.gene50781:intron | 30.0% | |
GTTCGAGAGAAATTTAAGAA+AGG | + | chr4.1:80513543-80513562 | MS.gene50781:intron | 30.0% | |
TCACCATTCAAAAATATCTG+AGG | - | chr4.1:80517522-80517541 | None:intergenic | 30.0% | |
TCATGATTAACATTGGATAG+GGG | + | chr4.1:80515721-80515740 | MS.gene50781:intron | 30.0% | |
TGTATTTATAAACCGAGCTT+AGG | + | chr4.1:80514486-80514505 | MS.gene50781:intron | 30.0% | |
TGTGTTTAAGAAGTCTCATA+TGG | - | chr4.1:80516587-80516606 | None:intergenic | 30.0% | |
TTAAGAAAGGTCATAAGAGA+TGG | + | chr4.1:80513556-80513575 | MS.gene50781:intron | 30.0% | |
TTATGATTCCCAGTGTAATT+AGG | + | chr4.1:80513044-80513063 | MS.gene50781:intron | 30.0% | |
TTTCTTAGCCTAATTACACT+GGG | - | chr4.1:80513055-80513074 | None:intergenic | 30.0% | |
! | AAGAGATTCTAACTTTTGGA+CGG | + | chr4.1:80513579-80513598 | MS.gene50781:intron | 30.0% |
! | ATATATATTCCTCGGATTAG+GGG | - | chr4.1:80512923-80512942 | None:intergenic | 30.0% |
! | ATATTTGGAGATTTAGAGCA+TGG | - | chr4.1:80517043-80517062 | None:intergenic | 30.0% |
! | ATGGAAGAGATTCTAACTTT+TGG | + | chr4.1:80513575-80513594 | MS.gene50781:intron | 30.0% |
! | TCCCGGTATTGAAAAAAATT+TGG | + | chr4.1:80514689-80514708 | MS.gene50781:intron | 30.0% |
! | TGGTCCCTTAACTTAATTTT+TGG | + | chr4.1:80515074-80515093 | MS.gene50781:intron | 30.0% |
! | TTATGAGAGTGTAGATGTAT+TGG | + | chr4.1:80517434-80517453 | MS.gene50781:CDS | 30.0% |
! | TTATTCTTGATGGATGAAAC+CGG | + | chr4.1:80513289-80513308 | MS.gene50781:intron | 30.0% |
! | TTTTTGAATGGTGAACTTGT+TGG | + | chr4.1:80517528-80517547 | MS.gene50781:CDS | 30.0% |
!! | AAAAGTGCCCTATATTACAT+GGG | + | chr4.1:80515660-80515679 | MS.gene50781:intron | 30.0% |
!! | AAGCTTTGGGATATAATTGA+GGG | + | chr4.1:80512670-80512689 | MS.gene50781:intron | 30.0% |
!! | AGGCTAAGAAAGAGTATTTA+AGG | + | chr4.1:80513064-80513083 | MS.gene50781:intron | 30.0% |
!! | ATGTAATATAGGGCACTTTT+GGG | - | chr4.1:80515660-80515679 | None:intergenic | 30.0% |
!! | CAAGTTGGTAAAAGAGAATA+AGG | + | chr4.1:80517323-80517342 | MS.gene50781:CDS | 30.0% |
!! | TAAGAAACATTGGTTCAGTT+TGG | + | chr4.1:80513482-80513501 | MS.gene50781:intron | 30.0% |
!! | TGGTCCCTTAACTTATTTTT+AGG | - | chr4.1:80515193-80515212 | None:intergenic | 30.0% |
!! | TTAGGCATGAAGGTTTTAAT+GGG | + | chr4.1:80516041-80516060 | MS.gene50781:intron | 30.0% |
!! | TTCCCTCAGATATTTTTGAA+TGG | + | chr4.1:80517516-80517535 | MS.gene50781:CDS | 30.0% |
!! | TTGAAGTTGGTAAGAAACAT+TGG | + | chr4.1:80513472-80513491 | MS.gene50781:intron | 30.0% |
!! | TTTAGGCATGAAGGTTTTAA+TGG | + | chr4.1:80516040-80516059 | MS.gene50781:intron | 30.0% |
!!! | CTAGAATTGTTTTGAAGCTT+TGG | + | chr4.1:80512656-80512675 | MS.gene50781:intron | 30.0% |
!!! | CTTTTCAAAGGTATTTTGAG+TGG | + | chr4.1:80515935-80515954 | MS.gene50781:intron | 30.0% |
!!! | GTTACTTTTTGGTTTCGTTT+TGG | + | chr4.1:80515025-80515044 | MS.gene50781:intron | 30.0% |
!!! | GTTACTTTTTGGTTTCGTTT+TGG | - | chr4.1:80515044-80515025 | None:intergenic | 30.0% |
!!! | GTTTTTAGCCCATGTAATAT+AGG | - | chr4.1:80515671-80515690 | None:intergenic | 30.0% |
AAAAAATCAGAAATGCCACG+TGG | + | chr4.1:80515467-80515486 | MS.gene50781:intron | 35.0% | |
AAAAGTGGCCTATATTACAG+GGG | - | chr4.1:80513659-80513678 | None:intergenic | 35.0% | |
AAGGAAAGGAAATAATTGGC+AGG | + | chr4.1:80513206-80513225 | MS.gene50781:intron | 35.0% | |
AAGGTAGTTGCATTCATCAA+GGG | + | chr4.1:80517342-80517361 | MS.gene50781:CDS | 35.0% | |
ACATTCATCCTATCGTAAAG+AGG | - | chr4.1:80515144-80515163 | None:intergenic | 35.0% | |
ACTCTCTCAAGGTTAAAGAA+AGG | + | chr4.1:80512698-80512717 | MS.gene50781:intron | 35.0% | |
AGGTCTATATCATCATTACC+GGG | + | chr4.1:80513517-80513536 | MS.gene50781:intron | 35.0% | |
ATAGATTCTGTTGAGTCACA+GGG | + | chr4.1:80515561-80515580 | MS.gene50781:intron | 35.0% | |
ATAGGCATTCTTGAAAAGGA+AGG | + | chr4.1:80517405-80517424 | MS.gene50781:CDS | 35.0% | |
ATGATTAACATTGGATAGGG+GGG | + | chr4.1:80515723-80515742 | MS.gene50781:intron | 35.0% | |
ATTCCAAATAGTCGTGACAT+TGG | - | chr4.1:80516002-80516021 | None:intergenic | 35.0% | |
ATTCTCAAGAGCAAGCTTAA+AGG | + | chr4.1:80516091-80516110 | MS.gene50781:intron | 35.0% | |
ATTTCATTGGGAAGAAGAGT+TGG | + | chr4.1:80515825-80515844 | MS.gene50781:intron | 35.0% | |
CAAAAGTGGCCTATATTACA+GGG | - | chr4.1:80513660-80513679 | None:intergenic | 35.0% | |
CATGATTAACATTGGATAGG+GGG | + | chr4.1:80515722-80515741 | MS.gene50781:intron | 35.0% | |
CTCACCGTTCTTATCATAAA+CGG | - | chr4.1:80511947-80511966 | None:intergenic | 35.0% | |
CTCTCTCAAGGTTAAAGAAA+GGG | + | chr4.1:80512699-80512718 | MS.gene50781:intron | 35.0% | |
CTTCCTTTACTTCTCTACAA+GGG | + | chr4.1:80513135-80513154 | MS.gene50781:intron | 35.0% | |
CTTGTCATTCAACCGTATAA+CGG | - | chr4.1:80514633-80514652 | None:intergenic | 35.0% | |
CTTTCTTAGCCTAATTACAC+TGG | - | chr4.1:80513056-80513075 | None:intergenic | 35.0% | |
GAAGAACACATAAAGATCAG+TGG | + | chr4.1:80517171-80517190 | MS.gene50781:CDS | 35.0% | |
GACTGAAAAACAACCAAACA+AGG | - | chr4.1:80516309-80516328 | None:intergenic | 35.0% | |
GCATATATATTCCTCGGATT+AGG | - | chr4.1:80512925-80512944 | None:intergenic | 35.0% | |
GGATGAATGTATTAGCGTTA+AGG | + | chr4.1:80515154-80515173 | MS.gene50781:intron | 35.0% | |
GGTAATAGGCATTCTTGAAA+AGG | + | chr4.1:80517401-80517420 | MS.gene50781:CDS | 35.0% | |
TAAGAGTGGTGAATTGGAAT+TGG | + | chr4.1:80515788-80515807 | MS.gene50781:intron | 35.0% | |
TAAGGTAGTTGCATTCATCA+AGG | + | chr4.1:80517341-80517360 | MS.gene50781:CDS | 35.0% | |
TAATATTGCTGCTACTGTCT+CGG | + | chr4.1:80511990-80512009 | MS.gene50781:CDS | 35.0% | |
TACGCCGTTTATGATAAGAA+CGG | + | chr4.1:80511940-80511959 | MS.gene50781:CDS | 35.0% | |
TATCCAAGAGTTACCATGTT+TGG | + | chr4.1:80516748-80516767 | MS.gene50781:intron | 35.0% | |
TATGAAGCACAAACTCAGAT+AGG | + | chr4.1:80512783-80512802 | MS.gene50781:intron | 35.0% | |
TCGGAATACACAAAAATTCC+TGG | - | chr4.1:80514559-80514578 | None:intergenic | 35.0% | |
TCTTCCTTTACTTCTCTACA+AGG | + | chr4.1:80513134-80513153 | MS.gene50781:intron | 35.0% | |
TCTTTCAACACTATTTCGCT+GGG | - | chr4.1:80516640-80516659 | None:intergenic | 35.0% | |
TGGTCCCTTAAGTTATTTGT+TGG | + | chr4.1:80514954-80514973 | MS.gene50781:intron | 35.0% | |
TGGTCCCTTAAGTTATTTGT+TGG | - | chr4.1:80514973-80514954 | None:intergenic | 35.0% | |
TTACCCTTGTAGAGAAGTAA+AGG | - | chr4.1:80513141-80513160 | None:intergenic | 35.0% | |
TTACTTCTCTACAAGGGTAA+TGG | + | chr4.1:80513141-80513160 | MS.gene50781:intron | 35.0% | |
TTCAAGTACTAGGAAACAGA+AGG | + | chr4.1:80513360-80513379 | MS.gene50781:intron | 35.0% | |
TTTAGCCCAAACCATTGTTT+GGG | - | chr4.1:80516786-80516805 | None:intergenic | 35.0% | |
TTTCCAATGTCACGACTATT+TGG | + | chr4.1:80515996-80516015 | MS.gene50781:intron | 35.0% | |
! | AATAATTGGCAGGTGGTTTT+AGG | + | chr4.1:80513216-80513235 | MS.gene50781:intron | 35.0% |
! | AGCGAAATAGTGTTGAAAGA+GGG | + | chr4.1:80516640-80516659 | MS.gene50781:intron | 35.0% |
! | ATGGATTAAGAGTGGTGAAT+TGG | + | chr4.1:80515782-80515801 | MS.gene50781:intron | 35.0% |
! | CTGTAACCCACAATTTCTTT+TGG | + | chr4.1:80516668-80516687 | MS.gene50781:intron | 35.0% |
! | GAAACATGGTTTCAAGTACT+AGG | + | chr4.1:80513350-80513369 | MS.gene50781:intron | 35.0% |
! | GAGCACCTTTATCTTTTCAA+AGG | + | chr4.1:80515923-80515942 | MS.gene50781:intron | 35.0% |
! | TCACGACTATTTGGAATACT+AGG | + | chr4.1:80516005-80516024 | MS.gene50781:intron | 35.0% |
! | TTAATTCTTGCTGCCTTGTT+TGG | + | chr4.1:80516293-80516312 | MS.gene50781:intron | 35.0% |
! | TTTTTGTGTATTCCGAGCTT+AGG | + | chr4.1:80514563-80514582 | MS.gene50781:intron | 35.0% |
!! | AAGGCGCTTTTTAGGAATAA+GGG | + | chr4.1:80513083-80513102 | MS.gene50781:intron | 35.0% |
!! | AGAATGGAATGGATTAAGAG+TGG | + | chr4.1:80515774-80515793 | MS.gene50781:intron | 35.0% |
!! | AGCTTTGGGATATAATTGAG+GGG | + | chr4.1:80512671-80512690 | MS.gene50781:intron | 35.0% |
!! | ATTTCGGAGTTTTGTCATGA+TGG | + | chr4.1:80512497-80512516 | MS.gene50781:intron | 35.0% |
!! | CAAAAGTGCCCTATATTACA+TGG | + | chr4.1:80515659-80515678 | MS.gene50781:intron | 35.0% |
!! | CATGTAATATAGGGCACTTT+TGG | - | chr4.1:80515661-80515680 | None:intergenic | 35.0% |
!! | GAAGCTTTGGGATATAATTG+AGG | + | chr4.1:80512669-80512688 | MS.gene50781:intron | 35.0% |
!! | GAGTATTTAAGGCGCTTTTT+AGG | + | chr4.1:80513075-80513094 | MS.gene50781:intron | 35.0% |
!! | TAAGGCGCTTTTTAGGAATA+AGG | + | chr4.1:80513082-80513101 | MS.gene50781:intron | 35.0% |
!! | TAGGCATGAAGGTTTTAATG+GGG | + | chr4.1:80516042-80516061 | MS.gene50781:intron | 35.0% |
!! | TGATTGATTTTTCTGTGGAG+TGG | + | chr4.1:80516537-80516556 | MS.gene50781:intron | 35.0% |
!! | TGCTGTGATTGATTTTTCTG+TGG | + | chr4.1:80516532-80516551 | MS.gene50781:intron | 35.0% |
!!! | ATTTTTTTTTGGGGTACACG+TGG | + | chr4.1:80513843-80513862 | MS.gene50781:intron | 35.0% |
!!! | CTGTAATATAGGCCACTTTT+GGG | + | chr4.1:80513659-80513678 | MS.gene50781:intron | 35.0% |
!!! | TGGTCCCTTAAGTTACTTTT+TGG | + | chr4.1:80515014-80515033 | MS.gene50781:intron | 35.0% |
!!! | TGGTCCCTTAAGTTACTTTT+TGG | - | chr4.1:80515033-80515014 | None:intergenic | 35.0% |
!!! | TTCAAAGGTATTTTGAGTGG+AGG | + | chr4.1:80515938-80515957 | MS.gene50781:intron | 35.0% |
ACTCAACAGAATCTATGAGG+TGG | - | chr4.1:80515557-80515576 | None:intergenic | 40.0% | |
ACTTTGGTCCTCTTTACGAT+AGG | + | chr4.1:80515133-80515152 | MS.gene50781:intron | 40.0% | |
AGAAAGGGTGATTCTTGCAT+AGG | + | chr4.1:80512714-80512733 | MS.gene50781:intron | 40.0% | |
AGTTGCTCCCACAATGAAAT+TGG | - | chr4.1:80512542-80512561 | None:intergenic | 40.0% | |
ATCATAAACGGCGTAAACTC+CGG | - | chr4.1:80511935-80511954 | None:intergenic | 40.0% | |
CACTTCACCTTTCTCAAACA+TGG | - | chr4.1:80517574-80517593 | None:intergenic | 40.0% | |
CATAGATTCTGTTGAGTCAC+AGG | + | chr4.1:80515560-80515579 | MS.gene50781:intron | 40.0% | |
CATGTTTGAGAAAGGTGAAG+TGG | + | chr4.1:80517572-80517591 | MS.gene50781:CDS | 40.0% | |
CCAAAAGTGGCCTATATTAC+AGG | - | chr4.1:80513661-80513680 | None:intergenic | 40.0% | |
CTCTTGGATAGATTCAAGTG+TGG | - | chr4.1:80516738-80516757 | None:intergenic | 40.0% | |
CTCTTTCAACACTATTTCGC+TGG | - | chr4.1:80516641-80516660 | None:intergenic | 40.0% | |
CTTGTCATTCAACCTAAGCT+CGG | - | chr4.1:80514578-80514597 | None:intergenic | 40.0% | |
CTTTAGCCCAAACCATTGTT+TGG | - | chr4.1:80516787-80516806 | None:intergenic | 40.0% | |
GAAAGGAAATAATTGGCAGG+TGG | + | chr4.1:80513209-80513228 | MS.gene50781:intron | 40.0% | |
GAACCAAACATGGTAACTCT+TGG | - | chr4.1:80516754-80516773 | None:intergenic | 40.0% | |
GGTCTATATCATCATTACCG+GGG | + | chr4.1:80513518-80513537 | MS.gene50781:intron | 40.0% | |
GTCGAATGTTTCTTGTGTAG+CGG | + | chr4.1:80516468-80516487 | MS.gene50781:intron | 40.0% | |
GTGACTCAACAGAATCTATG+AGG | - | chr4.1:80515560-80515579 | None:intergenic | 40.0% | |
GTTATGTGGATTCTCTCAGA+GGG | + | chr4.1:80517380-80517399 | MS.gene50781:CDS | 40.0% | |
TAGATTCTGTTGAGTCACAG+GGG | + | chr4.1:80515562-80515581 | MS.gene50781:intron | 40.0% | |
TATCGTAAAGAGGACCAAAG+TGG | - | chr4.1:80515134-80515153 | None:intergenic | 40.0% | |
TCAGCACAAAACTCTCAATC+AGG | - | chr4.1:80516509-80516528 | None:intergenic | 40.0% | |
TGGACATTCATTTACACACG+TGG | + | chr4.1:80515487-80515506 | MS.gene50781:intron | 40.0% | |
TGTGGCATTAATGTAGCTTG+AGG | + | chr4.1:80512158-80512177 | MS.gene50781:intron | 40.0% | |
TGTGTAAATGAATGTCCACG+TGG | - | chr4.1:80515485-80515504 | None:intergenic | 40.0% | |
TTCACCTTTCTCAAACATGG+AGG | - | chr4.1:80517571-80517590 | None:intergenic | 40.0% | |
TTGACCTCCATGTTTGAGAA+AGG | + | chr4.1:80517564-80517583 | MS.gene50781:CDS | 40.0% | |
TTGGAATACTAGGAATGCCA+CGG | + | chr4.1:80516015-80516034 | MS.gene50781:intron | 40.0% | |
TTTGGCCCAAACAATGGTTT+GGG | + | chr4.1:80516778-80516797 | MS.gene50781:intron | 40.0% | |
! | CAAACTTTTCACGAACCTTC+CGG | - | chr4.1:80515964-80515983 | None:intergenic | 40.0% |
! | CAGCGAAATAGTGTTGAAAG+AGG | + | chr4.1:80516639-80516658 | MS.gene50781:intron | 40.0% |
! | CTCTGAGAGAATCCACATAA+CGG | - | chr4.1:80517381-80517400 | None:intergenic | 40.0% |
! | GCTTTTAGCCCCTGTAATAT+AGG | + | chr4.1:80513648-80513667 | MS.gene50781:intron | 40.0% |
! | GTGCAATTCTGTTTTGCAGT+CGG | + | chr4.1:80516384-80516403 | MS.gene50781:intron | 40.0% |
! | TAACTTTTGGACGGATCTGT+TGG | + | chr4.1:80513588-80513607 | MS.gene50781:intron | 40.0% |
! | TACTATATAGGTTGGGGTAG+TGG | + | chr4.1:80517101-80517120 | MS.gene50781:intron | 40.0% |
!! | AAAGATTCTGCTGACTCAAG+GGG | - | chr4.1:80513757-80513776 | None:intergenic | 40.0% |
!! | ACCATGTTTGGTTCTCTGTT+TGG | + | chr4.1:80516760-80516779 | MS.gene50781:intron | 40.0% |
!! | AGTTGGTGGAGGTATTTCAA+GGG | + | chr4.1:80515842-80515861 | MS.gene50781:intron | 40.0% |
!! | CAAAGATTCTGCTGACTCAA+GGG | - | chr4.1:80513758-80513777 | None:intergenic | 40.0% |
!! | CCTGTAATATAGGCCACTTT+TGG | + | chr4.1:80513658-80513677 | MS.gene50781:intron | 40.0% |
!! | GAAACATTGGTTCAGTTTGG+TGG | + | chr4.1:80513485-80513504 | MS.gene50781:intron | 40.0% |
!! | TATTTCAAGGGCTAGCTGTA+GGG | + | chr4.1:80515854-80515873 | MS.gene50781:intron | 40.0% |
!! | TCAAAGATTCTGCTGACTCA+AGG | - | chr4.1:80513759-80513778 | None:intergenic | 40.0% |
!! | TCTCTACAAGGGTAATGGAA+AGG | + | chr4.1:80513146-80513165 | MS.gene50781:intron | 40.0% |
!! | TGAAGGTTTTAATGGGGAGA+AGG | + | chr4.1:80516048-80516067 | MS.gene50781:intron | 40.0% |
!! | TGTGGAGTGGCTTTTTAGTA+TGG | + | chr4.1:80516550-80516569 | MS.gene50781:intron | 40.0% |
!! | TTAGCTTTTCGCTTAACCAG+TGG | + | chr4.1:80516116-80516135 | MS.gene50781:intron | 40.0% |
!! | TTGAATGGTGAACTTGTTGG+TGG | + | chr4.1:80517531-80517550 | MS.gene50781:CDS | 40.0% |
!!! | AGAAGGCGGAAATTTTAGCT+TGG | + | chr4.1:80516065-80516084 | MS.gene50781:intron | 40.0% |
AAATTTCTCTCGAACCACCC+CGG | - | chr4.1:80513538-80513557 | None:intergenic | 45.0% | |
AACGGTGAGCTTCAGTTCAT+CGG | + | chr4.1:80511958-80511977 | MS.gene50781:CDS | 45.0% | |
AAGACCACAGCCTAAGAAGA+AGG | + | chr4.1:80517236-80517255 | MS.gene50781:CDS | 45.0% | |
AAGAGGACCAAAGTGGTTGA+CGG | - | chr4.1:80515127-80515146 | None:intergenic | 45.0% | |
AAGCAATACCAGAACACGCA+AGG | - | chr4.1:80516187-80516206 | None:intergenic | 45.0% | |
ACACAAGAAACATTCGACCC+CGG | - | chr4.1:80516466-80516485 | None:intergenic | 45.0% | |
ACTCAGATAGGAACAGGACA+CGG | + | chr4.1:80512795-80512814 | MS.gene50781:intron | 45.0% | |
AGCAATACCAGAACACGCAA+GGG | - | chr4.1:80516186-80516205 | None:intergenic | 45.0% | |
AGTCAGCAGAATCTTTGACG+TGG | + | chr4.1:80513761-80513780 | MS.gene50781:intron | 45.0% | |
CATCCAAGACTTCCATGCTT+GGG | - | chr4.1:80517151-80517170 | None:intergenic | 45.0% | |
CATCTTCATCTGTGCATTGG+AGG | + | chr4.1:80516354-80516373 | MS.gene50781:intron | 45.0% | |
CGAAGATCAGCCTTCTTCTT+AGG | - | chr4.1:80517249-80517268 | None:intergenic | 45.0% | |
CGTTATGTGGATTCTCTCAG+AGG | + | chr4.1:80517379-80517398 | MS.gene50781:CDS | 45.0% | |
CTATATCATCATTACCGGGG+TGG | + | chr4.1:80513521-80513540 | MS.gene50781:intron | 45.0% | |
CTCTACAACCATGTCTGCAA+AGG | - | chr4.1:80515753-80515772 | None:intergenic | 45.0% | |
CTGCAAGCAAAGCTGCAAAA+AGG | - | chr4.1:80516331-80516350 | None:intergenic | 45.0% | |
CTGCATCTTCATCTGTGCAT+TGG | + | chr4.1:80516351-80516370 | MS.gene50781:intron | 45.0% | |
CTTTGCAGACATGGTTGTAG+AGG | + | chr4.1:80515751-80515770 | MS.gene50781:intron | 45.0% | |
GACATGGTTGTAGAGGAGAA+TGG | + | chr4.1:80515758-80515777 | MS.gene50781:intron | 45.0% | |
GAGAATCTTTGACCCAAGCA+TGG | + | chr4.1:80517136-80517155 | MS.gene50781:CDS | 45.0% | |
GAGTGGTGAATTGGAATTGG+AGG | + | chr4.1:80515791-80515810 | MS.gene50781:intron | 45.0% | |
GCAACATGCTGAAGTGGAAT+TGG | + | chr4.1:80513109-80513128 | MS.gene50781:intron | 45.0% | |
GCACAAACTCAGATAGGAAC+AGG | + | chr4.1:80512789-80512808 | MS.gene50781:intron | 45.0% | |
GCCAAACAGAGAACCAAACA+TGG | - | chr4.1:80516764-80516783 | None:intergenic | 45.0% | |
GCGTGACACGTCATCAAAAA+AGG | - | chr4.1:80513799-80513818 | None:intergenic | 45.0% | |
GCTGATCTTCGATTAACACC+TGG | + | chr4.1:80517258-80517277 | MS.gene50781:CDS | 45.0% | |
GGATTCTCTCAGAGGGTAAT+AGG | + | chr4.1:80517387-80517406 | MS.gene50781:CDS | 45.0% | |
GGTTGTAGAGGAGAATGGAA+TGG | + | chr4.1:80515763-80515782 | MS.gene50781:intron | 45.0% | |
GTGTGGACAAACATAGAGCA+TGG | - | chr4.1:80516721-80516740 | None:intergenic | 45.0% | |
GTTCCACCTGGAAATGAATC+CGG | + | chr4.1:80517198-80517217 | MS.gene50781:CDS | 45.0% | |
GTTGACGGAGGAAGAGTTAA+GGG | - | chr4.1:80515112-80515131 | None:intergenic | 45.0% | |
GTTTGGCCCAAACAATGGTT+TGG | + | chr4.1:80516777-80516796 | MS.gene50781:intron | 45.0% | |
TCATTGGGAAGAAGAGTTGG+TGG | + | chr4.1:80515828-80515847 | MS.gene50781:intron | 45.0% | |
TCTCTGTTTGGCCCAAACAA+TGG | + | chr4.1:80516772-80516791 | MS.gene50781:intron | 45.0% | |
TGAATTGGAATTGGAGGTGG+CGG | + | chr4.1:80515797-80515816 | MS.gene50781:intron | 45.0% | |
TGAGGGGATATACTCTCTCA+AGG | + | chr4.1:80512687-80512706 | MS.gene50781:intron | 45.0% | |
TGGGTCAAAGATTCTCTGTC+AGG | - | chr4.1:80517132-80517151 | None:intergenic | 45.0% | |
TGGTGAATTGGAATTGGAGG+TGG | + | chr4.1:80515794-80515813 | MS.gene50781:intron | 45.0% | |
TGTTCTGGTATTGCTTGGTC+AGG | + | chr4.1:80516191-80516210 | MS.gene50781:intron | 45.0% | |
TTAACAGAGCCACAAAGCTC+CGG | - | chr4.1:80512033-80512052 | None:intergenic | 45.0% | |
TTGCGTGTTCTGGTATTGCT+TGG | + | chr4.1:80516186-80516205 | MS.gene50781:intron | 45.0% | |
TTTCCGGATTCATTTCCAGG+TGG | - | chr4.1:80517204-80517223 | None:intergenic | 45.0% | |
TTTCTTGTGTAGCGGTTCCA+GGG | + | chr4.1:80516476-80516495 | MS.gene50781:intron | 45.0% | |
TTTGAGAAAGGTGAAGTGGC+TGG | + | chr4.1:80517576-80517595 | MS.gene50781:CDS | 45.0% | |
! | CAGTTTGGTGGAGGGATTTA+AGG | + | chr4.1:80513497-80513516 | MS.gene50781:intron | 45.0% |
! | GTCGCAGCAGTTTCATTTTC+CGG | + | chr4.1:80516444-80516463 | MS.gene50781:intron | 45.0% |
! | GTGGCGGAGACTATTTCATT+GGG | + | chr4.1:80515813-80515832 | MS.gene50781:intron | 45.0% |
! | TCGCAGCAGTTTCATTTTCC+GGG | + | chr4.1:80516445-80516464 | MS.gene50781:intron | 45.0% |
! | TTGTTTGCTTGAGGGGGTAT+GGG | + | chr4.1:80516232-80516251 | MS.gene50781:intron | 45.0% |
!! | AAGATTCTGCTGACTCAAGG+GGG | - | chr4.1:80513756-80513775 | None:intergenic | 45.0% |
!! | AAGGTATTTTGAGTGGAGGC+CGG | + | chr4.1:80515942-80515961 | MS.gene50781:intron | 45.0% |
!! | ACATTGGTTCAGTTTGGTGG+AGG | + | chr4.1:80513488-80513507 | MS.gene50781:intron | 45.0% |
!! | AGGTTTTAATGGGGAGAAGG+CGG | + | chr4.1:80516051-80516070 | MS.gene50781:intron | 45.0% |
!! | ATAATGTGTCGGTGTCGTGT+TGG | + | chr4.1:80512865-80512884 | MS.gene50781:intron | 45.0% |
!! | CATTGGTTCAGTTTGGTGGA+GGG | + | chr4.1:80513489-80513508 | MS.gene50781:intron | 45.0% |
!! | GAGTTGGTGGAGGTATTTCA+AGG | + | chr4.1:80515841-80515860 | MS.gene50781:intron | 45.0% |
!! | GTATTTCAAGGGCTAGCTGT+AGG | + | chr4.1:80515853-80515872 | MS.gene50781:intron | 45.0% |
!!! | AGGCGGAAATTTTAGCTTGG+AGG | + | chr4.1:80516068-80516087 | MS.gene50781:intron | 45.0% |
!! | TGAAAAAAATTTAAAAAATA+CGG | + | chr4.1:80514032-80514051 | MS.gene50781:intron | 5.0% |
!! | TTTAAAAAATTAAAAAATTC+TGG | + | chr4.1:80513876-80513895 | MS.gene50781:intron | 5.0% |
!!! | ATGAAATTTTTTAAAAAAAT+TGG | - | chr4.1:80514838-80514857 | None:intergenic | 5.0% |
!!! | TTATTTTATATTTTTTTTTG+GGG | + | chr4.1:80513834-80513853 | MS.gene50781:intron | 5.0% |
AAACCTCGCCGATACTTCAC+CGG | + | chr4.1:80511855-80511874 | MS.gene50781:CDS | 50.0% | |
ACAGGGGCTAAACCCAAAAG+TGG | - | chr4.1:80513674-80513693 | None:intergenic | 50.0% | |
ACCTTCATGCCTAAAAGCCG+TGG | - | chr4.1:80516035-80516054 | None:intergenic | 50.0% | |
AGATAGTGCGAGGTTAGCAG+GGG | + | chr4.1:80516264-80516283 | MS.gene50781:intron | 50.0% | |
AGTTAAGCCCTTGCGTGTTC+TGG | + | chr4.1:80516176-80516195 | MS.gene50781:intron | 50.0% | |
ATCAGTGGGAAAGTTCCACC+TGG | + | chr4.1:80517186-80517205 | MS.gene50781:CDS | 50.0% | |
ATGAATCCGGAAACGCCACT+TGG | + | chr4.1:80517211-80517230 | MS.gene50781:CDS | 50.0% | |
CCAAGCATGGAAGTCTTGGA+TGG | + | chr4.1:80517149-80517168 | MS.gene50781:CDS | 50.0% | |
CCATCCAAGACTTCCATGCT+TGG | - | chr4.1:80517152-80517171 | None:intergenic | 50.0% | |
CCGGAAAACGATGAAGTCAC+CGG | + | chr4.1:80511889-80511908 | MS.gene50781:CDS | 50.0% | |
CTCAATCAGGTCAAGATCCC+TGG | - | chr4.1:80516496-80516515 | None:intergenic | 50.0% | |
CTTGTTTGCTTGAGGGGGTA+TGG | + | chr4.1:80516231-80516250 | MS.gene50781:intron | 50.0% | |
GAGATAGTGCGAGGTTAGCA+GGG | + | chr4.1:80516263-80516282 | MS.gene50781:intron | 50.0% | |
GCGTTTCCGGATTCATTTCC+AGG | - | chr4.1:80517207-80517226 | None:intergenic | 50.0% | |
GGGAAAGCAACATGCTGAAG+TGG | + | chr4.1:80513103-80513122 | MS.gene50781:intron | 50.0% | |
GGTTGACGGAGGAAGAGTTA+AGG | - | chr4.1:80515113-80515132 | None:intergenic | 50.0% | |
GTCCCTGCTTGTTTGCTTGA+GGG | + | chr4.1:80516224-80516243 | MS.gene50781:intron | 50.0% | |
GTTTCTTGTGTAGCGGTTCC+AGG | + | chr4.1:80516475-80516494 | MS.gene50781:intron | 50.0% | |
TCAGCCTTCTTCTTAGGCTG+TGG | - | chr4.1:80517243-80517262 | None:intergenic | 50.0% | |
TCCCTGCTTGTTTGCTTGAG+GGG | + | chr4.1:80516225-80516244 | MS.gene50781:intron | 50.0% | |
TCTTACCCAAGTGGCGTTTC+CGG | - | chr4.1:80517220-80517239 | None:intergenic | 50.0% | |
TCTTCCTCCGTCAACCACTT+TGG | + | chr4.1:80515117-80515136 | MS.gene50781:intron | 50.0% | |
TGAAGAGCTCGTGGACAAGT+TGG | + | chr4.1:80517308-80517327 | MS.gene50781:CDS | 50.0% | |
TGAATCCGGAAACGCCACTT+GGG | + | chr4.1:80517212-80517231 | MS.gene50781:CDS | 50.0% | |
TGACCCAAGCATGGAAGTCT+TGG | + | chr4.1:80517145-80517164 | MS.gene50781:CDS | 50.0% | |
TGTCCACGAGCTCTTCAAGA+GGG | - | chr4.1:80517305-80517324 | None:intergenic | 50.0% | |
TGTCCCTGCTTGTTTGCTTG+AGG | + | chr4.1:80516223-80516242 | MS.gene50781:intron | 50.0% | |
TTGTCCACGAGCTCTTCAAG+AGG | - | chr4.1:80517306-80517325 | None:intergenic | 50.0% | |
! | CCGGTGACTTCATCGTTTTC+CGG | - | chr4.1:80511892-80511911 | None:intergenic | 50.0% |
! | CGCAGCAGTTTCATTTTCCG+GGG | + | chr4.1:80516446-80516465 | MS.gene50781:intron | 50.0% |
! | CTAGGAATGCCACGGCTTTT+AGG | + | chr4.1:80516023-80516042 | MS.gene50781:intron | 50.0% |
! | GGAGCTTTGTGGCTCTGTTA+AGG | + | chr4.1:80512032-80512051 | MS.gene50781:CDS | 50.0% |
! | TGGACGGATCTGTTGGTTGA+TGG | + | chr4.1:80513595-80513614 | MS.gene50781:intron | 50.0% |
!! | GGCTTGATTTGGAGCAAGCA+GGG | + | chr4.1:80516153-80516172 | MS.gene50781:intron | 50.0% |
!! | GGTGGCGGAGACTATTTCAT+TGG | + | chr4.1:80515812-80515831 | MS.gene50781:intron | 50.0% |
!! | TATTTTGAGTGGAGGCCGGA+AGG | + | chr4.1:80515946-80515965 | MS.gene50781:intron | 50.0% |
!! | TGGCTTGATTTGGAGCAAGC+AGG | + | chr4.1:80516152-80516171 | MS.gene50781:intron | 50.0% |
!! | TTGGGAAGAAGAGTTGGTGG+AGG | + | chr4.1:80515831-80515850 | MS.gene50781:intron | 50.0% |
ACCCCCTCAAGCAAACAAGC+AGG | - | chr4.1:80516230-80516249 | None:intergenic | 55.0% | |
ACCCGACGGAAGTTCTTCTC+CGG | - | chr4.1:80511911-80511930 | None:intergenic | 55.0% | |
ACCGGAGAAGAACTTCCGTC+GGG | + | chr4.1:80511907-80511926 | MS.gene50781:CDS | 55.0% | |
AGGACCAAAGTGGTTGACGG+AGG | - | chr4.1:80515124-80515143 | None:intergenic | 55.0% | |
CACCGGAGAAGAACTTCCGT+CGG | + | chr4.1:80511906-80511925 | MS.gene50781:CDS | 55.0% | |
CACCGTCACCGGTGAAGTAT+CGG | - | chr4.1:80511866-80511885 | None:intergenic | 55.0% | |
CACGAGCTCTTCAAGAGGGA+CGG | - | chr4.1:80517301-80517320 | None:intergenic | 55.0% | |
CCCCCTCAAGCAAACAAGCA+GGG | - | chr4.1:80516229-80516248 | None:intergenic | 55.0% | |
CCCTGCTTGTTTGCTTGAGG+GGG | + | chr4.1:80516226-80516245 | MS.gene50781:intron | 55.0% | |
CGAGATAGTGCGAGGTTAGC+AGG | + | chr4.1:80516262-80516281 | MS.gene50781:intron | 55.0% | |
CTGTTGAGTCACAGGGGTCA+GGG | + | chr4.1:80515568-80515587 | MS.gene50781:intron | 55.0% | |
GAGAATGGCAGAAGGGAGTG+GGG | + | chr4.1:80515882-80515901 | MS.gene50781:intron | 55.0% | |
GGAGAATGGCAGAAGGGAGT+GGG | + | chr4.1:80515881-80515900 | MS.gene50781:intron | 55.0% | |
GGGGATCTCCTTTGCAGACA+TGG | + | chr4.1:80515742-80515761 | MS.gene50781:intron | 55.0% | |
GGTATTGCTTGGTCAGGTGC+TGG | + | chr4.1:80516197-80516216 | MS.gene50781:intron | 55.0% | |
GTTAGTTGCACGTGACGACC+AGG | - | chr4.1:80517279-80517298 | None:intergenic | 55.0% | |
TCCACATAACGGCGCACTTC+TGG | - | chr4.1:80517370-80517389 | None:intergenic | 55.0% | |
TCTGTTGAGTCACAGGGGTC+AGG | + | chr4.1:80515567-80515586 | MS.gene50781:intron | 55.0% | |
TGTTGAGTCACAGGGGTCAG+GGG | + | chr4.1:80515569-80515588 | MS.gene50781:intron | 55.0% | |
! | AGGCTGTGGTCTTACCCAAG+TGG | - | chr4.1:80517229-80517248 | None:intergenic | 55.0% |
! | CTGTTTTGCAGTCGGTGTGC+TGG | + | chr4.1:80516392-80516411 | MS.gene50781:intron | 55.0% |
! | GCCACGGCTTTTAGGCATGA+AGG | + | chr4.1:80516031-80516050 | MS.gene50781:intron | 55.0% |
! | TCCAGAAGTGCGCCGTTATG+TGG | + | chr4.1:80517366-80517385 | MS.gene50781:CDS | 55.0% |
! | TTGCTTGAGGGGGTATGGGT+TGG | + | chr4.1:80516236-80516255 | MS.gene50781:intron | 55.0% |
! | TTTTCCGGTGACACCGTCAC+CGG | - | chr4.1:80511877-80511896 | None:intergenic | 55.0% |
!! | AAAGCTCCGGCACCGATTTC+CGG | - | chr4.1:80512020-80512039 | None:intergenic | 55.0% |
!! | AAATCGGTGCCGGAGCTTTG+TGG | + | chr4.1:80512021-80512040 | MS.gene50781:CDS | 55.0% |
!! | TCAAGGGCTAGCTGTAGGGA+GGG | + | chr4.1:80515858-80515877 | MS.gene50781:intron | 55.0% |
!! | TGTCGGTGTCGTGTTGGTGT+GGG | + | chr4.1:80512871-80512890 | MS.gene50781:intron | 55.0% |
!! | TTCAAGGGCTAGCTGTAGGG+AGG | + | chr4.1:80515857-80515876 | MS.gene50781:intron | 55.0% |
!! | TTCCTCGGATTAGGGGTGTC+CGG | - | chr4.1:80512916-80512935 | None:intergenic | 55.0% |
AATGGCAGAAGGGAGTGGGG+AGG | + | chr4.1:80515885-80515904 | MS.gene50781:intron | 60.0% | |
AGCTGTAGGGAGGGGGAGAA+TGG | + | chr4.1:80515867-80515886 | MS.gene50781:intron | 60.0% | |
CGCCGATACTTCACCGGTGA+CGG | + | chr4.1:80511861-80511880 | MS.gene50781:CDS | 60.0% | |
CGTCCCTCTTGAAGAGCTCG+TGG | + | chr4.1:80517299-80517318 | MS.gene50781:CDS | 60.0% | |
GAAGAACTTCCGTCGGGTGC+CGG | + | chr4.1:80511913-80511932 | MS.gene50781:CDS | 60.0% | |
GGAGGGGGAGAATGGCAGAA+GGG | + | chr4.1:80515875-80515894 | MS.gene50781:intron | 60.0% | |
GGGAGAATGGCAGAAGGGAG+TGG | + | chr4.1:80515880-80515899 | MS.gene50781:intron | 60.0% | |
GTTGGAGGCGAGATAGTGCG+AGG | + | chr4.1:80516254-80516273 | MS.gene50781:intron | 60.0% | |
TGTCTCGGCGCACCGGAAAT+CGG | + | chr4.1:80512005-80512024 | MS.gene50781:CDS | 60.0% | |
!! | AAGGGCTAGCTGTAGGGAGG+GGG | + | chr4.1:80515860-80515879 | MS.gene50781:intron | 60.0% |
!! | CAAGGGCTAGCTGTAGGGAG+GGG | + | chr4.1:80515859-80515878 | MS.gene50781:intron | 60.0% |
!! | CTGCTGACTCAAGGGGGTCA+GGG | - | chr4.1:80513750-80513769 | None:intergenic | 60.0% |
!! | CTTGAGGGGGTATGGGTTGG+AGG | + | chr4.1:80516239-80516258 | MS.gene50781:intron | 60.0% |
!! | GTGTCGGTGTCGTGTTGGTG+TGG | + | chr4.1:80512870-80512889 | MS.gene50781:intron | 60.0% |
!! | TCACCGGTGAAGTATCGGCG+AGG | - | chr4.1:80511861-80511880 | None:intergenic | 60.0% |
!! | TCTATGAGGTGGCGCTGACG+TGG | - | chr4.1:80515546-80515565 | None:intergenic | 60.0% |
!! | TCTGCTGACTCAAGGGGGTC+AGG | - | chr4.1:80513751-80513770 | None:intergenic | 60.0% |
!! | TGCTGACTCAAGGGGGTCAG+GGG | - | chr4.1:80513749-80513768 | None:intergenic | 60.0% |
!! | TTCACCGGTGACGGTGTCAC+CGG | + | chr4.1:80511870-80511889 | MS.gene50781:CDS | 60.0% |
CACCGGACACCCCTAATCCG+AGG | + | chr4.1:80512911-80512930 | MS.gene50781:intron | 65.0% | |
CTGCTACTGTCTCGGCGCAC+CGG | + | chr4.1:80511998-80512017 | MS.gene50781:CDS | 65.0% | |
GCAGAAGGGAGTGGGGAGGA+GGG | + | chr4.1:80515889-80515908 | MS.gene50781:intron | 65.0% | |
GCGTAAACTCCGGCACCCGA+CGG | - | chr4.1:80511925-80511944 | None:intergenic | 65.0% | |
GGGAGGGGGAGAATGGCAGA+AGG | + | chr4.1:80515874-80515893 | MS.gene50781:intron | 65.0% | |
GTGCGAGGTTAGCAGGGGCT+TGG | + | chr4.1:80516269-80516288 | MS.gene50781:intron | 65.0% | |
AGGGAGTGGGGAGGAGGGAG+CGG | + | chr4.1:80515894-80515913 | MS.gene50781:intron | 70.0% | |
GGCAGAAGGGAGTGGGGAGG+AGG | + | chr4.1:80515888-80515907 | MS.gene50781:intron | 70.0% | |
GGCGCACCGGAAATCGGTGC+CGG | + | chr4.1:80512011-80512030 | MS.gene50781:CDS | 70.0% | |
GAGTGGGGAGGAGGGAGCGG+GGG | + | chr4.1:80515897-80515916 | MS.gene50781:intron | 75.0% | |
GGAGTGGGGAGGAGGGAGCG+GGG | + | chr4.1:80515896-80515915 | MS.gene50781:intron | 75.0% | |
GGGAGTGGGGAGGAGGGAGC+GGG | + | chr4.1:80515895-80515914 | MS.gene50781:intron | 75.0% | |
! | GGGGAGGAGGGAGCGGGGGC+TGG | + | chr4.1:80515901-80515920 | MS.gene50781:intron | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 80511844 | 80517614 | 80511844 | ID=MS.gene50781 |
chr4.1 | mRNA | 80511844 | 80517614 | 80511844 | ID=MS.gene50781.t1;Parent=MS.gene50781 |
chr4.1 | exon | 80511844 | 80512053 | 80511844 | ID=MS.gene50781.t1.exon1;Parent=MS.gene50781.t1 |
chr4.1 | CDS | 80511844 | 80512053 | 80511844 | ID=cds.MS.gene50781.t1;Parent=MS.gene50781.t1 |
chr4.1 | exon | 80517111 | 80517614 | 80517111 | ID=MS.gene50781.t1.exon2;Parent=MS.gene50781.t1 |
chr4.1 | CDS | 80517111 | 80517614 | 80517111 | ID=cds.MS.gene50781.t1;Parent=MS.gene50781.t1 |
Gene Sequence |
Protein sequence |