AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene63012


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene63012.t1 MTR_1g030230 84.856 383 41 2 1 370 1 379 0.0 650
MS.gene63012.t1 MTR_1g030268 82.940 381 49 3 1 367 4 382 0.0 632
MS.gene63012.t1 MTR_1g030275 78.068 383 69 2 1 370 4 384 0.0 601
MS.gene63012.t1 MTR_1g030265 89.667 300 18 1 84 370 53 352 0.0 543
MS.gene63012.t1 MTR_1g030220 66.043 374 112 2 11 369 13 386 0.0 517
MS.gene63012.t1 MTR_1g030268 82.667 300 38 2 1 286 4 303 5.08e-175 490
MS.gene63012.t1 MTR_1g030340 61.170 376 130 3 9 369 15 389 1.77e-163 463
MS.gene63012.t1 MTR_7g087190 53.316 377 159 3 10 369 17 393 3.18e-147 422
MS.gene63012.t1 MTR_8g089805 54.047 383 153 5 2 363 3 383 2.55e-143 412
MS.gene63012.t1 MTR_7g033165 48.333 360 164 4 28 369 25 380 9.35e-113 334
MS.gene63012.t1 MTR_8g089805 53.716 296 121 2 84 363 20 315 2.09e-111 328
MS.gene63012.t1 MTR_6g007090 42.526 388 189 8 1 367 4 378 8.67e-99 298
MS.gene63012.t1 MTR_7g113860 45.634 355 169 8 25 360 18 367 1.30e-96 292
MS.gene63012.t1 MTR_7g116870 40.957 376 197 5 10 367 7 375 3.60e-95 289
MS.gene63012.t1 MTR_7g033150 40.155 386 202 7 6 367 4 384 1.06e-94 288
MS.gene63012.t1 MTR_8g038680 41.969 386 185 8 7 367 1 372 7.79e-93 283
MS.gene63012.t1 MTR_7g033155 41.476 393 182 9 16 367 13 398 3.77e-91 279
MS.gene63012.t1 MTR_7g113860 42.547 369 186 9 12 360 11 373 8.80e-91 278
MS.gene63012.t1 MTR_1g082390 43.396 371 181 10 12 361 7 369 1.94e-90 276
MS.gene63012.t1 MTR_6g007100 40.000 380 189 9 7 368 4 362 5.05e-89 272
MS.gene63012.t1 MTR_8g028160 38.462 390 209 5 1 367 1 382 6.28e-89 273
MS.gene63012.t1 MTR_6g007095 40.561 392 188 9 7 366 1 379 7.87e-88 279
MS.gene63012.t1 MTR_6g007095 39.826 344 164 8 44 368 378 697 2.38e-73 241
MS.gene63012.t1 MTR_7g033165 49.819 277 120 3 28 286 25 300 1.06e-85 262
MS.gene63012.t1 MTR_7g111780 40.688 349 172 9 36 368 36 365 9.96e-80 249
MS.gene63012.t1 MTR_7g113860 44.108 297 143 7 82 360 8 299 3.57e-73 230
MS.gene63012.t1 MTR_8g012540 40.678 354 165 11 7 332 1 337 1.47e-72 229
MS.gene63012.t1 MTR_2g015650 35.754 358 180 12 34 361 29 366 2.49e-56 188
MS.gene63012.t1 MTR_7g111780 37.809 283 143 7 100 368 3 266 3.45e-54 179
MS.gene63012.t1 MTR_2g015580 32.732 388 213 11 1 359 12 380 3.11e-51 176
MS.gene63012.t1 MTR_1g030262 96.386 83 3 0 1 83 1 83 3.21e-50 164
MS.gene63012.t1 MTR_2g015670 33.898 354 178 12 34 361 29 352 6.77e-50 171
MS.gene63012.t1 MTR_2g015590 33.151 365 198 9 24 359 18 365 2.14e-49 170
MS.gene63012.t1 MTR_3g463960 33.056 360 188 12 34 361 42 380 1.06e-48 169
MS.gene63012.t1 MTR_3g463950 33.056 360 188 12 34 361 42 380 1.06e-48 169
MS.gene63012.t1 MTR_3g463970 33.056 360 188 12 34 361 42 380 1.06e-48 169
MS.gene63012.t1 MTR_3g463940 33.056 360 188 12 34 361 42 380 1.06e-48 169
MS.gene63012.t1 MTR_3g463930 32.682 358 199 11 34 361 42 387 2.02e-48 168
MS.gene63012.t1 MTR_2g079090 31.445 353 188 10 34 361 28 351 1.55e-47 165
MS.gene63012.t1 MTR_0029s0100 31.728 353 187 10 34 361 28 351 5.36e-47 164
MS.gene63012.t1 MTR_2g015630 30.990 384 215 10 8 361 5 368 6.32e-47 164
MS.gene63012.t1 MTR_2g079080 31.161 353 189 10 34 361 28 351 6.68e-47 163
MS.gene63012.t1 MTR_0029s0050 31.445 353 188 10 34 361 28 351 1.72e-46 162
MS.gene63012.t1 MTR_4g104240 32.295 353 192 12 34 360 37 368 4.63e-43 154
MS.gene63012.t1 MTR_3g069780 32.337 368 190 15 34 366 28 371 7.45e-43 153
MS.gene63012.t1 MTR_3g438030 32.337 368 190 15 34 366 28 371 7.77e-43 153
MS.gene63012.t1 MTR_2g043980 32.123 358 177 12 34 361 32 353 5.60e-42 150
MS.gene63012.t1 MTR_3g448360 31.653 357 195 12 34 361 27 363 1.89e-41 149
MS.gene63012.t1 MTR_3g069520 31.492 362 199 11 34 366 28 369 1.95e-41 149
MS.gene63012.t1 MTR_8g014910 30.959 365 201 14 11 351 9 346 5.62e-38 140
MS.gene63012.t1 MTR_2g100620 30.792 341 187 12 35 351 30 345 8.65e-37 136
MS.gene63012.t1 MTR_8g031420 29.462 353 207 9 15 347 10 340 1.24e-35 134
MS.gene63012.t1 MTR_8g022810 31.129 363 201 12 13 351 18 355 1.47e-35 134
MS.gene63012.t1 MTR_8g031430 30.448 335 195 9 36 354 37 349 8.70e-35 131
MS.gene63012.t1 MTR_4g056280 30.904 343 183 11 35 351 29 343 1.83e-34 130
MS.gene63012.t1 MTR_8g031400 30.746 335 194 9 36 354 37 349 3.10e-34 130
MS.gene63012.t1 MTR_4g056160 29.855 345 197 11 35 356 26 348 4.84e-34 129
MS.gene63012.t1 MTR_1g082410 29.134 381 167 12 12 366 6 309 6.92e-34 127
MS.gene63012.t1 MTR_8g031390 30.488 328 189 10 36 347 37 341 5.01e-33 127
MS.gene63012.t1 MTR_2g015590 31.615 291 162 7 24 286 18 299 1.46e-32 125
MS.gene63012.t1 MTR_1g025720 29.589 365 207 11 4 347 10 345 5.56e-32 124
MS.gene63012.t1 MTR_2g033930 29.315 365 209 13 15 358 15 351 6.58e-32 123
MS.gene63012.t1 MTR_5g074270 26.546 388 219 15 14 367 7 362 4.82e-31 121
MS.gene63012.t1 MTR_8g079050 27.838 370 221 12 10 354 12 360 5.41e-30 119
MS.gene63012.t1 MTR_5g084770 29.248 359 201 15 16 347 6 338 7.22e-30 117
MS.gene63012.t1 MTR_1g025780 28.986 345 193 12 31 351 36 352 3.05e-29 116
MS.gene63012.t1 MTR_5g009100 27.874 348 207 11 38 364 48 372 7.39e-29 115
MS.gene63012.t1 MTR_5g084750 28.177 362 201 14 10 346 11 338 1.05e-28 114
MS.gene63012.t1 MTR_4g122200 30.086 349 197 13 33 358 32 356 1.36e-28 114
MS.gene63012.t1 MTR_8g087890 26.053 380 238 10 4 364 1 356 2.45e-28 114
MS.gene63012.t1 MTR_3g082830 26.781 351 209 12 29 356 31 356 5.36e-28 113
MS.gene63012.t1 MTR_2g084585 28.487 337 199 12 35 351 29 343 6.23e-28 112
MS.gene63012.t1 MTR_1g025700 26.722 363 209 13 10 345 24 356 9.87e-28 112
MS.gene63012.t1 MTR_3g098270 27.642 369 218 12 15 360 13 355 1.02e-27 112
MS.gene63012.t1 MTR_2g033920 29.275 345 199 11 36 358 35 356 1.05e-27 112
MS.gene63012.t1 MTR_1g025760 27.224 371 206 15 10 345 46 387 1.12e-27 112
MS.gene63012.t1 MTR_1g025680 27.624 362 209 13 11 345 6 341 1.61e-27 113
MS.gene63012.t1 MTR_5g084790 28.698 338 189 12 35 347 31 341 1.97e-27 111
MS.gene63012.t1 MTR_3g052490 28.941 387 217 14 1 359 1 357 2.52e-27 111
MS.gene63012.t1 MTR_5g022630 30.655 336 187 14 31 343 38 350 2.58e-27 111
MS.gene63012.t1 MTR_7g116500 27.838 370 210 13 16 355 8 350 4.84e-27 110
MS.gene63012.t1 MTR_7g116520 30.337 356 191 14 36 364 34 359 5.78e-27 110
MS.gene63012.t1 MTR_3g114120 29.565 345 193 14 20 343 36 351 7.28e-27 110
MS.gene63012.t1 MTR_0565s0010 25.995 377 235 10 10 365 8 361 8.73e-27 109
MS.gene63012.t1 MTR_8g031390 30.584 291 167 9 36 310 37 308 1.84e-26 107
MS.gene63012.t1 MTR_5g022640 28.125 352 204 12 31 358 38 364 1.89e-26 108
MS.gene63012.t1 MTR_3g024510 26.575 365 220 12 4 347 9 346 2.92e-26 108
MS.gene63012.t1 MTR_8g075220 27.168 346 207 12 30 351 34 358 6.77e-26 107
MS.gene63012.t1 MTR_5g093090 28.732 355 189 12 35 357 27 349 6.91e-26 107
MS.gene63012.t1 MTR_3g052480 28.530 347 195 12 35 354 32 352 1.85e-25 106
MS.gene63012.t1 MTR_3g114090 27.300 337 195 11 31 343 31 341 1.87e-25 105
MS.gene63012.t1 MTR_7g116510 27.988 343 200 11 36 355 25 343 2.97e-25 105
MS.gene63012.t1 MTR_6g021530 27.513 378 218 14 11 359 3 353 1.26e-24 103
MS.gene63012.t1 MTR_4g087985 28.385 384 198 19 15 354 16 366 1.70e-24 103
MS.gene63012.t1 MTR_3g464730 27.893 337 194 13 35 347 27 338 1.76e-24 103
MS.gene63012.t1 MTR_2g044100 28.116 345 202 13 36 357 43 364 2.06e-24 103
MS.gene63012.t1 MTR_4g019880 26.546 388 232 15 1 364 1 359 2.31e-24 103
MS.gene63012.t1 MTR_1g025910 27.508 309 183 11 60 351 63 347 2.46e-24 103
MS.gene63012.t1 MTR_5g078210 27.961 304 180 11 68 356 62 341 2.66e-24 102
MS.gene63012.t1 MTR_2g015080 25.333 375 214 14 10 348 13 357 2.98e-24 102
MS.gene63012.t1 MTR_8g022810 28.612 353 170 12 13 351 18 302 3.49e-24 101
MS.gene63012.t1 MTR_3g052580 28.571 350 201 13 35 359 27 352 3.59e-24 102
MS.gene63012.t1 MTR_3g052580 28.571 350 201 13 35 359 26 351 4.80e-24 102
MS.gene63012.t1 MTR_2g043990 30.492 305 139 13 15 285 72 337 8.45e-24 100
MS.gene63012.t1 MTR_7g116570 26.608 342 205 11 36 355 34 351 9.05e-24 101
MS.gene63012.t1 MTR_8g075200 26.801 347 202 13 30 351 35 354 1.19e-23 101
MS.gene63012.t1 MTR_3g005650 27.027 370 228 13 10 364 8 350 1.70e-23 100
MS.gene63012.t1 MTR_1g069175 28.312 385 217 14 7 364 8 360 3.47e-23 99.8
MS.gene63012.t1 MTR_1g079530 29.379 354 191 15 36 364 29 348 7.14e-23 98.6
MS.gene63012.t1 MTR_3g435540 26.849 365 208 17 14 351 4 336 1.14e-22 98.2
MS.gene63012.t1 MTR_8g022790 29.679 374 200 11 12 354 4 345 2.18e-22 97.4
MS.gene63012.t1 MTR_3g005660 25.215 349 215 11 35 359 35 361 1.48e-21 95.1
MS.gene63012.t1 MTR_1g024890 27.586 348 194 12 36 355 32 349 2.22e-21 94.7
MS.gene63012.t1 MTR_0009s0250 27.036 307 186 9 9 295 5 293 4.94e-21 93.2
MS.gene63012.t1 MTR_2g461580 24.211 380 225 8 15 368 7 349 5.30e-21 93.2
MS.gene63012.t1 MTR_8g074570 24.808 391 236 13 7 367 9 371 9.95e-21 92.8
MS.gene63012.t1 MTR_8g075230 26.050 357 212 12 16 347 16 345 7.54e-20 90.1
MS.gene63012.t1 MTR_2g033920 29.670 273 158 9 36 286 35 295 1.05e-19 89.0
MS.gene63012.t1 MTR_5g083040 25.360 347 205 13 35 354 31 350 1.38e-19 89.4
MS.gene63012.t1 MTR_8g012520 39.474 114 50 2 170 283 7 101 1.59e-19 84.3
MS.gene63012.t1 MTR_1g092750 25.373 335 203 10 31 348 35 339 2.80e-19 88.2
MS.gene63012.t1 MTR_4g108690 25.000 300 180 10 71 351 67 340 1.43e-18 86.7
MS.gene63012.t1 MTR_1108s0010 29.148 223 126 5 146 355 3 206 1.78e-18 83.6
MS.gene63012.t1 MTR_4g035353 24.370 357 218 11 15 346 10 339 2.40e-18 85.9
MS.gene63012.t1 MTR_2g017955 23.810 378 239 11 4 359 1 351 2.87e-18 85.9
MS.gene63012.t1 MTR_3g021460 26.685 356 193 12 35 364 30 343 3.56e-18 85.1
MS.gene63012.t1 MTR_7g104220 24.848 330 205 10 37 351 43 344 6.36e-18 84.3
MS.gene63012.t1 MTR_5g087690 26.059 307 184 9 74 362 83 364 1.96e-17 83.2
MS.gene63012.t1 MTR_1g060490 24.419 344 208 14 28 351 27 338 3.52e-17 82.0
MS.gene63012.t1 MTR_3g023220 25.460 326 200 11 35 346 32 328 4.00e-17 82.0
MS.gene63012.t1 MTR_1g092760 25.633 316 193 10 37 338 40 327 8.23e-17 81.3
MS.gene63012.t1 MTR_5g078210 29.487 234 139 9 68 286 62 284 1.15e-16 80.5
MS.gene63012.t1 MTR_5g074210 27.811 169 97 4 210 367 64 218 2.53e-16 77.8
MS.gene63012.t1 MTR_2g017925 24.789 355 215 11 13 346 7 330 4.46e-16 79.3
MS.gene63012.t1 MTR_8g074560 24.346 382 221 14 8 354 4 352 7.22e-16 78.6
MS.gene63012.t1 MTR_8g074580 26.647 334 186 13 70 355 82 404 1.31e-15 78.2
MS.gene63012.t1 MTR_0127s0040 24.771 218 131 4 165 365 33 234 3.20e-15 74.7
MS.gene63012.t1 MTR_5g093090 27.465 284 154 10 35 286 27 290 1.32e-14 73.9
MS.gene63012.t1 MTR_1g092690 24.383 324 204 10 28 338 43 338 1.34e-14 74.7
MS.gene63012.t1 MTR_8g087870 24.332 337 192 12 35 346 28 326 2.82e-13 70.5
MS.gene63012.t1 MTR_1g092740 23.939 330 211 10 37 353 39 341 1.26e-12 68.6
MS.gene63012.t1 MTR_2g058390 42.857 63 36 0 167 229 7 69 4.48e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene63012.t1 AT3G26430 49.867 377 173 2 9 369 4 380 1.99e-135 391
MS.gene63012.t1 AT1G67830 50.423 355 152 3 32 370 26 372 5.61e-128 372
MS.gene63012.t1 AT5G14450 47.467 375 175 4 14 370 19 389 1.72e-121 356
MS.gene63012.t1 AT3G27950 45.093 377 167 10 15 367 10 370 4.41e-94 286
MS.gene63012.t1 AT1G54790 42.091 373 191 9 7 360 3 369 2.79e-92 281
MS.gene63012.t1 AT1G54790 42.359 373 189 10 7 360 5 370 3.66e-91 279
MS.gene63012.t1 AT4G01130 39.529 382 211 4 2 367 3 380 2.78e-88 271
MS.gene63012.t1 AT1G56670 40.691 376 189 9 10 369 16 373 2.54e-87 268
MS.gene63012.t1 AT1G09390 40.625 384 195 9 1 367 1 368 2.02e-86 266
MS.gene63012.t1 AT1G54790 39.348 399 191 10 7 360 3 395 2.85e-86 267
MS.gene63012.t1 AT3G05180 41.026 351 183 6 33 364 33 378 3.79e-80 250
MS.gene63012.t1 AT3G62280 40.115 349 171 10 35 365 35 363 2.68e-73 232
MS.gene63012.t1 AT4G01130 40.476 294 156 3 8 286 9 298 1.70e-67 216
MS.gene63012.t1 AT1G56670 40.411 292 149 6 10 286 16 297 2.85e-62 201
MS.gene63012.t1 AT1G28600 34.761 397 206 10 1 369 1 372 1.80e-61 202
MS.gene63012.t1 AT4G01130 36.949 295 169 3 89 367 1 294 2.25e-60 197
MS.gene63012.t1 AT1G28650 34.635 384 203 9 7 359 5 371 1.37e-58 195
MS.gene63012.t1 AT1G28580 33.071 381 206 8 12 360 9 372 2.82e-57 191
MS.gene63012.t1 AT1G28590 32.990 388 215 7 1 360 1 371 3.92e-57 191
MS.gene63012.t1 AT1G31550 34.366 355 189 7 33 360 33 370 3.28e-56 189
MS.gene63012.t1 AT5G45910 35.655 359 181 11 34 359 28 369 3.13e-53 180
MS.gene63012.t1 AT1G28670 33.684 380 203 9 12 359 8 370 4.32e-53 180
MS.gene63012.t1 AT1G28610 32.558 387 210 9 1 359 1 364 4.54e-53 180
MS.gene63012.t1 AT1G31550 33.333 354 191 7 33 360 33 367 1.89e-52 179
MS.gene63012.t1 AT1G28640 32.723 382 203 9 12 359 8 369 2.38e-52 179
MS.gene63012.t1 AT3G62280 39.273 275 138 7 35 292 35 297 2.55e-52 176
MS.gene63012.t1 AT1G28570 31.070 383 213 9 10 360 6 369 3.28e-50 173
MS.gene63012.t1 AT2G27360 31.877 389 214 11 9 367 7 374 4.50e-50 172
MS.gene63012.t1 AT1G28660 32.283 381 205 11 12 359 8 368 4.33e-48 167
MS.gene63012.t1 AT1G28660 32.723 382 203 12 12 359 8 369 1.81e-47 166
MS.gene63012.t1 AT3G48460 29.333 375 216 8 13 359 15 368 3.93e-41 149
MS.gene63012.t1 AT1G28580 30.565 301 170 6 82 360 8 291 3.58e-40 144
MS.gene63012.t1 AT3G16370 30.746 335 187 11 35 347 29 340 1.58e-33 127
MS.gene63012.t1 AT2G23540 28.056 360 194 12 30 354 42 371 5.72e-32 124
MS.gene63012.t1 AT1G75900 28.319 339 190 13 34 347 41 351 1.12e-31 123
MS.gene63012.t1 AT5G45670 26.776 366 221 10 1 347 1 338 1.24e-30 120
MS.gene63012.t1 AT5G42170 28.824 340 199 11 31 351 45 360 1.67e-30 120
MS.gene63012.t1 AT5G22810 29.275 345 189 12 35 351 33 350 1.49e-29 117
MS.gene63012.t1 AT5G03820 28.488 344 192 12 35 351 32 348 1.72e-29 117
MS.gene63012.t1 AT5G63170 29.859 355 191 12 11 343 3 321 2.88e-29 116
MS.gene63012.t1 AT5G03820 27.321 377 220 13 4 351 25 376 2.94e-29 117
MS.gene63012.t1 AT1G20120 31.285 358 191 16 29 358 71 401 3.35e-29 117
MS.gene63012.t1 AT1G59406 27.222 360 217 11 12 351 6 340 8.72e-29 115
MS.gene63012.t1 AT1G59030 27.222 360 217 11 12 351 6 340 8.72e-29 115
MS.gene63012.t1 AT1G58725 27.222 360 217 11 12 351 6 340 8.72e-29 115
MS.gene63012.t1 AT4G10950 28.205 351 208 12 35 364 70 397 9.33e-29 115
MS.gene63012.t1 AT2G42990 28.338 367 210 14 10 350 1 340 1.69e-28 114
MS.gene63012.t1 AT5G40990 28.267 375 227 11 4 354 1 357 1.70e-28 114
MS.gene63012.t1 AT4G26790 26.453 344 199 13 34 351 27 342 2.21e-28 114
MS.gene63012.t1 AT4G26790 26.453 344 199 13 34 351 27 342 2.21e-28 114
MS.gene63012.t1 AT5G08460 27.778 378 223 15 14 365 28 381 5.35e-28 113
MS.gene63012.t1 AT3G50400 28.125 352 197 14 34 354 32 358 2.87e-27 111
MS.gene63012.t1 AT5G15720 26.946 334 202 9 35 347 29 341 2.92e-27 111
MS.gene63012.t1 AT5G03810 26.453 344 198 12 35 351 29 344 4.33e-27 110
MS.gene63012.t1 AT1G71120 26.374 364 197 9 23 354 18 342 4.81e-27 110
MS.gene63012.t1 AT1G53920 26.902 368 216 10 4 341 7 351 6.01e-27 110
MS.gene63012.t1 AT1G29670 25.344 363 230 11 4 347 67 407 7.73e-27 110
MS.gene63012.t1 AT1G29670 25.852 352 220 11 15 347 10 339 9.34e-27 109
MS.gene63012.t1 AT3G14225 30.409 342 198 13 36 354 37 361 9.80e-27 109
MS.gene63012.t1 AT3G14225 30.792 341 194 13 36 354 37 357 1.34e-26 109
MS.gene63012.t1 AT1G06990 26.549 339 198 12 34 347 35 347 1.63e-26 108
MS.gene63012.t1 AT1G20130 28.863 343 199 13 30 347 198 520 3.00e-26 110
MS.gene63012.t1 AT4G10950 27.920 351 205 13 35 364 70 393 3.14e-26 108
MS.gene63012.t1 AT1G20130 28.863 343 199 13 30 347 178 500 3.32e-26 110
MS.gene63012.t1 AT2G04570 26.053 380 208 14 11 356 6 346 3.96e-26 107
MS.gene63012.t1 AT1G53940 30.702 342 193 12 36 354 39 359 3.96e-26 108
MS.gene63012.t1 AT5G37690 28.667 300 173 11 68 351 64 338 8.69e-26 107
MS.gene63012.t1 AT4G18970 26.205 332 205 9 35 347 27 337 1.94e-25 105
MS.gene63012.t1 AT2G30310 27.566 341 197 10 28 343 26 341 2.03e-25 105
MS.gene63012.t1 AT3G04290 29.060 351 185 13 36 355 29 346 2.08e-25 105
MS.gene63012.t1 AT4G18970 26.205 332 205 9 35 347 27 337 2.26e-25 106
MS.gene63012.t1 AT1G75880 27.397 365 212 14 15 351 26 365 1.09e-24 103
MS.gene63012.t1 AT5G45950 26.347 334 200 12 36 350 40 346 1.10e-24 103
MS.gene63012.t1 AT1G28570 28.922 204 119 3 175 360 11 206 1.49e-24 100
MS.gene63012.t1 AT1G75880 27.322 366 212 15 15 351 26 366 1.56e-24 103
MS.gene63012.t1 AT1G28570 25.347 288 179 7 93 360 26 297 1.60e-24 102
MS.gene63012.t1 AT2G31540 26.111 360 207 12 28 356 27 358 1.63e-24 103
MS.gene63012.t1 AT1G20132 26.844 339 194 11 35 347 60 370 3.00e-24 102
MS.gene63012.t1 AT1G58430 28.621 290 169 8 34 298 33 309 3.31e-24 102
MS.gene63012.t1 AT3G53100 26.239 343 211 11 29 351 22 342 3.37e-24 102
MS.gene63012.t1 AT2G30220 27.647 340 190 12 34 345 31 342 1.06e-23 100
MS.gene63012.t1 AT1G53990 27.688 372 220 13 7 354 2 348 1.63e-23 100
MS.gene63012.t1 AT1G54030 28.374 289 157 7 68 344 87 337 1.76e-23 101
MS.gene63012.t1 AT1G75890 27.072 362 211 14 13 347 51 386 3.14e-23 100
MS.gene63012.t1 AT1G75890 27.072 362 211 14 13 347 22 357 3.17e-23 99.8
MS.gene63012.t1 AT1G73610 27.778 342 190 13 31 351 30 335 5.51e-23 99.0
MS.gene63012.t1 AT5G45960 28.866 291 165 12 36 298 47 323 6.77e-23 99.0
MS.gene63012.t1 AT1G28600 34.545 220 117 7 1 209 1 204 1.07e-22 95.5
MS.gene63012.t1 AT5G03610 26.506 332 200 11 37 351 44 348 1.17e-22 98.2
MS.gene63012.t1 AT2G24560 27.907 344 192 12 28 343 26 341 1.31e-22 98.2
MS.gene63012.t1 AT1G29660 25.762 361 225 12 6 347 4 340 1.35e-22 98.2
MS.gene63012.t1 AT4G28780 26.608 342 205 11 36 355 31 348 1.43e-22 98.2
MS.gene63012.t1 AT3G14820 26.347 334 206 10 35 351 31 341 1.64e-22 97.4
MS.gene63012.t1 AT1G58520 26.844 339 200 12 31 351 25 333 1.76e-22 97.4
MS.gene63012.t1 AT1G58525 26.844 339 200 12 31 351 25 333 1.76e-22 97.4
MS.gene63012.t1 AT5G18430 27.697 343 200 12 36 354 28 346 1.88e-22 97.4
MS.gene63012.t1 AT2G40250 26.389 288 176 9 36 298 36 312 4.47e-22 96.7
MS.gene63012.t1 AT1G23500 30.108 279 164 9 36 295 35 301 4.93e-22 96.3
MS.gene63012.t1 AT1G75890 26.471 374 211 16 13 347 22 370 6.00e-22 96.3
MS.gene63012.t1 AT1G71691 26.558 369 221 14 12 357 29 370 6.31e-22 96.3
MS.gene63012.t1 AT5G33370 26.667 345 201 12 36 355 30 347 6.98e-22 95.9
MS.gene63012.t1 AT2G19050 26.590 346 198 11 35 359 30 340 1.01e-21 95.5
MS.gene63012.t1 AT1G33811 25.956 366 225 13 7 347 4 348 1.57e-21 95.1
MS.gene63012.t1 AT1G71250 25.066 379 218 13 14 360 15 359 1.72e-21 95.1
MS.gene63012.t1 AT1G75930 28.866 291 172 10 28 295 21 299 3.84e-21 93.6
MS.gene63012.t1 AT3G43550 27.517 298 181 10 10 286 3 286 4.25e-21 92.4
MS.gene63012.t1 AT1G54020 25.956 366 220 11 15 364 12 342 5.36e-21 93.6
MS.gene63012.t1 AT5G37690 27.333 300 169 12 68 351 64 330 1.03e-20 92.4
MS.gene63012.t1 AT2G19060 26.781 351 193 13 35 359 29 341 1.31e-20 92.0
MS.gene63012.t1 AT1G28610 33.491 212 116 6 1 202 1 197 1.54e-20 90.1
MS.gene63012.t1 AT5G15720 25.000 304 184 8 62 347 33 310 1.57e-20 91.7
MS.gene63012.t1 AT1G20135 24.930 357 212 10 13 348 6 327 1.61e-20 91.7
MS.gene63012.t1 AT2G03980 27.679 336 191 15 33 344 40 347 1.73e-20 92.0
MS.gene63012.t1 AT2G03980 27.679 336 191 15 33 344 40 347 1.73e-20 92.0
MS.gene63012.t1 AT2G03980 27.679 336 191 15 33 344 40 347 1.73e-20 92.0
MS.gene63012.t1 AT2G03980 27.679 336 191 15 33 344 40 347 1.73e-20 92.0
MS.gene63012.t1 AT3G43570 24.716 352 212 12 10 351 3 311 2.04e-20 91.3
MS.gene63012.t1 AT5G15720 26.740 273 170 7 35 286 29 292 5.11e-20 90.1
MS.gene63012.t1 AT2G19010 25.145 346 203 11 35 359 29 339 1.07e-19 89.7
MS.gene63012.t1 AT2G19010 25.145 346 203 11 35 359 59 369 1.56e-19 89.4
MS.gene63012.t1 AT5G03980 27.513 189 112 3 175 347 127 306 1.00e-18 86.3
MS.gene63012.t1 AT2G24560 28.374 289 163 10 28 288 26 298 1.73e-18 85.5
MS.gene63012.t1 AT5G41890 25.159 314 185 13 68 354 69 359 2.48e-18 85.9
MS.gene63012.t1 AT1G53940 31.752 274 149 10 36 286 39 297 2.49e-18 85.1
MS.gene63012.t1 AT1G54000 25.737 373 223 14 12 364 12 350 3.55e-18 85.5
MS.gene63012.t1 AT1G74460 27.246 334 193 15 38 347 25 332 4.97e-18 85.1
MS.gene63012.t1 AT1G71691 27.517 298 178 12 12 286 29 311 8.89e-18 83.6
MS.gene63012.t1 AT1G54010 25.936 374 221 13 12 364 12 350 1.43e-17 84.0
MS.gene63012.t1 AT1G75910 26.280 293 172 10 31 295 23 299 8.58e-17 80.9
MS.gene63012.t1 AT3G09930 24.545 330 204 12 37 348 40 342 2.00e-16 80.1
MS.gene63012.t1 AT3G09930 24.545 330 204 12 37 348 40 342 2.00e-16 80.1
MS.gene63012.t1 AT1G75920 26.710 307 186 12 15 295 6 299 2.27e-16 79.7
MS.gene63012.t1 AT2G04020 30.732 205 124 8 33 230 40 233 2.38e-16 78.6
MS.gene63012.t1 AT2G04020 30.374 214 131 8 33 239 40 242 2.97e-16 79.3
MS.gene63012.t1 AT4G30140 26.957 345 196 13 35 359 32 340 3.23e-16 79.3
MS.gene63012.t1 AT5G03600 25.000 336 190 13 35 348 13 308 5.99e-16 78.2
MS.gene63012.t1 AT5G03600 25.000 336 190 13 35 348 48 343 6.04e-16 78.6
MS.gene63012.t1 AT2G19050 26.744 258 153 6 35 273 30 270 1.04e-15 77.0
MS.gene63012.t1 AT1G71691 24.324 296 179 12 80 357 1 269 1.67e-14 73.6
MS.gene63012.t1 AT2G31550 26.744 172 99 5 200 356 58 217 6.03e-14 70.9
MS.gene63012.t1 AT1G54030 27.189 217 124 5 68 273 87 280 1.98e-13 70.9
MS.gene63012.t1 AT4G16230 30.165 242 126 12 12 230 4 225 2.72e-13 69.7
MS.gene63012.t1 AT1G75920 25.466 322 186 13 15 295 1 309 7.44e-13 69.3
MS.gene63012.t1 AT5G33370 25.725 276 165 10 36 286 30 290 1.01e-12 68.9
MS.gene63012.t1 AT1G54020 23.448 290 176 8 87 364 1 256 3.44e-12 66.6
MS.gene63012.t1 AT1G54020 23.448 290 176 8 87 364 1 256 3.44e-12 66.6
MS.gene63012.t1 AT1G54020 23.448 290 176 8 87 364 1 256 3.44e-12 66.6
MS.gene63012.t1 AT4G16233 32.258 124 73 2 235 358 6 118 3.94e-12 63.5
MS.gene63012.t1 AT1G75920 25.292 257 158 10 60 295 28 271 2.64e-11 64.3
MS.gene63012.t1 AT3G14210 24.118 340 207 11 26 345 26 334 8.11e-11 63.5

Find 74 sgRNAs with CRISPR-Local

Find 183 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATTCTTTGTAGCAAATAT+TGG 0.178924 1.2:-15906820 None:intergenic
TATAAAATTCTTTACTATAT+CGG 0.214825 1.2:-15909232 None:intergenic
ACCAATATCAAATGTGTATA+AGG 0.220968 1.2:-15909145 None:intergenic
TACTGAATTTGAAGGGAAAA+TGG 0.224045 1.2:-15908899 None:intergenic
AACCATCTACTAGAATAATA+TGG 0.227325 1.2:+15909952 MS.gene63012:CDS
TTTGGAATAATAATCTTCTT+TGG 0.255011 1.2:-15909121 None:intergenic
AATTAGGGGCCAGGTCATTT+TGG 0.264269 1.2:+15909445 MS.gene63012:CDS
CCATTGGGTATAATACTATT+AGG 0.269389 1.2:-15908866 None:intergenic
ATCTAGAATATATACAAATT+AGG 0.275565 1.2:+15909429 MS.gene63012:intron
TGGCACAAATAGAGTTTCTT+AGG 0.276916 1.2:+15906749 MS.gene63012:CDS
AATTCTTTGTAGCAAATATT+GGG 0.277876 1.2:-15906819 None:intergenic
TCTAGAATATATACAAATTA+GGG 0.278589 1.2:+15909430 MS.gene63012:intron
TTGGAATAATAATCTTCTTT+GGG 0.286703 1.2:-15909120 None:intergenic
TCCCATATTATTCTAGTAGA+TGG 0.294746 1.2:-15909954 None:intergenic
CGAATCATTCTTGATTTCAT+AGG 0.296923 1.2:+15906976 MS.gene63012:CDS
ATCCTCCCATTCCACTAAAT+AGG 0.303807 1.2:+15910045 MS.gene63012:CDS
GCCTTATACACATTTGATAT+TGG 0.309552 1.2:+15909144 MS.gene63012:CDS
GGAGAAATCATAAACATAAA+TGG 0.328429 1.2:+15909900 MS.gene63012:CDS
ATAAAATTCTTTACTATATC+GGG 0.350692 1.2:-15909231 None:intergenic
TTGTAACATGCCCTATTTAG+TGG 0.352126 1.2:-15910056 None:intergenic
GTCTTTGATCAAATCTCTAC+TGG 0.362400 1.2:+15910011 MS.gene63012:CDS
ATCAAATGTGTATAAGGCTT+TGG 0.373582 1.2:-15909139 None:intergenic
TCCTCCCATTCCACTAAATA+GGG 0.392622 1.2:+15910046 MS.gene63012:CDS
AAATGCTGATACTGGTGGTT+TGG 0.396433 1.2:+15906876 MS.gene63012:CDS
GCACCAAAGTTAAATATTGC+AGG 0.407053 1.2:-15906850 None:intergenic
GGTGCTTCAAATGCTGATAC+TGG 0.421451 1.2:+15906868 MS.gene63012:CDS
ATACACAACACTGGACCAAT+TGG 0.429145 1.2:+15909468 MS.gene63012:CDS
GCAAAATTCATTAGAGATCA+AGG 0.430565 1.2:+15908950 MS.gene63012:CDS
ATTAAGATATGGACTTAGGT+AGG 0.436390 1.2:-15908780 None:intergenic
TTTCCTGCAATATTTAACTT+TGG 0.440023 1.2:+15906847 MS.gene63012:CDS
ACCATCTACTAGAATAATAT+GGG 0.442115 1.2:+15909953 MS.gene63012:CDS
GATCCTAGAGAATTAAGATA+TGG 0.444570 1.2:-15908791 None:intergenic
CAAGCACTTCAGTTGCCAAA+TGG 0.446432 1.2:+15906910 MS.gene63012:CDS
GGTCAAAATGATCTTACTGC+TGG 0.468242 1.2:+15909165 MS.gene63012:CDS
CATGCCCTATTTAGTGGAAT+GGG 0.472312 1.2:-15910050 None:intergenic
AGTCCATATCTTAATTCTCT+AGG 0.487332 1.2:+15908788 MS.gene63012:CDS
AAATGGACTAAACATTCCAT+TGG 0.487410 1.2:-15908882 None:intergenic
ACATGCCCTATTTAGTGGAA+TGG 0.489175 1.2:-15910051 None:intergenic
GAGAATTAAGATATGGACTT+AGG 0.490134 1.2:-15908784 None:intergenic
CTATGAAATCAAGAATGATT+CGG 0.493581 1.2:-15906975 None:intergenic
ATTAAAGGCACACATCCAAT+TGG 0.496742 1.2:-15909483 None:intergenic
AAATGGTACAAACATTGTTG+TGG 0.497281 1.2:+15909917 MS.gene63012:CDS
GGTGCAAACTTTGCAACAGC+AGG 0.502492 1.2:+15908827 MS.gene63012:CDS
TGTATTGCTTTGCACAACCT+TGG 0.503056 1.2:-15909538 None:intergenic
AATGGTACAAACATTGTTGT+GGG 0.503607 1.2:+15909918 MS.gene63012:CDS
TGGCAACTGAAGTGCTTGAA+AGG 0.511071 1.2:-15906905 None:intergenic
ATTGATTGTACTGAATTTGA+AGG 0.512446 1.2:-15908907 None:intergenic
GATCCACACGAAGTTGAGCT+AGG 0.516606 1.2:-15909601 None:intergenic
ATATATACAAATTAGGGGCC+AGG 0.517339 1.2:+15909436 MS.gene63012:CDS
CATGTGGCATGTTGTGGCTA+TGG 0.526634 1.2:+15909843 MS.gene63012:CDS
AATGGACTAAACATTCCATT+GGG 0.529064 1.2:-15908881 None:intergenic
ATTCTTTGTAGCAAATATTG+GGG 0.543366 1.2:-15906818 None:intergenic
TTAAGATATGGACTTAGGTA+GGG 0.544125 1.2:-15908779 None:intergenic
TGGAATAATAATCTTCTTTG+GGG 0.555591 1.2:-15909119 None:intergenic
ACATATGTGATTGCAGCTAG+TGG 0.560723 1.2:-15909626 None:intergenic
TTGATTGTACTGAATTTGAA+GGG 0.569678 1.2:-15908906 None:intergenic
CCTAATAGTATTATACCCAA+TGG 0.577765 1.2:+15908866 MS.gene63012:CDS
AGCCCTAGCTCAACTTCGTG+TGG 0.589422 1.2:+15909598 MS.gene63012:CDS
CTACCACATGTGGCATGTTG+TGG 0.589804 1.2:+15909837 MS.gene63012:CDS
TATAACATTCGTGCTAGATG+TGG 0.594579 1.2:+15909879 MS.gene63012:CDS
GCTTCAAATGCTGATACTGG+TGG 0.598979 1.2:+15906871 MS.gene63012:CDS
ATCCACACGAAGTTGAGCTA+GGG 0.606515 1.2:-15909600 None:intergenic
CTAGGATCAAACTTCACACA+TGG 0.612367 1.2:+15908806 MS.gene63012:CDS
GCCCTATTTAGTGGAATGGG+AGG 0.622277 1.2:-15910047 None:intergenic
GTGCAAACTTTGCAACAGCA+GGG 0.631688 1.2:+15908828 MS.gene63012:CDS
TCTACTAGAATAATATGGGA+TGG 0.641361 1.2:+15909957 MS.gene63012:CDS
TTCTTTGTAGCAAATATTGG+GGG 0.645637 1.2:-15906817 None:intergenic
AGGATTTGAGCTACCACATG+TGG 0.650013 1.2:+15909827 MS.gene63012:intron
GTGGCATGTTGTGGCTATGG+AGG 0.654822 1.2:+15909846 MS.gene63012:CDS
TAGCCACAACATGCCACATG+TGG 0.671628 1.2:-15909840 None:intergenic
TCTGCTATAAAGGATAGCCA+AGG 0.676832 1.2:+15909521 MS.gene63012:intron
CTAGAATATATACAAATTAG+GGG 0.698873 1.2:+15909431 MS.gene63012:intron
GTTGTGTATCCAAAATGACC+TGG 0.720607 1.2:-15909454 None:intergenic
GGATGGTACACATTACACAG+AGG 0.801423 1.2:+15909974 MS.gene63012:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTATAAAAAATAATA+AGG - chr1.2:15908214-15908233 None:intergenic 0.0%
!! TAATATTGATCTTTAATAAA+TGG + chr1.2:15908071-15908090 MS.gene63012:intron 10.0%
!! TATAAAATTCTTTACTATAT+CGG - chr1.2:15909235-15909254 None:intergenic 10.0%
!!! AATTATTTCTATATTTATGA+AGG + chr1.2:15908710-15908729 MS.gene63012:intron 10.0%
!!! ATATTTTAATTTAAAGTTGA+AGG + chr1.2:15909574-15909593 MS.gene63012:CDS 10.0%
!!! ATTATTTCTATATTTATGAA+GGG + chr1.2:15908711-15908730 MS.gene63012:intron 10.0%
!!! TATAAGAGTATTAATTAATT+TGG + chr1.2:15908042-15908061 MS.gene63012:intron 10.0%
!!! TTTTTTTTAATTCTTTTTTG+AGG - chr1.2:15907200-15907219 None:intergenic 10.0%
!! AAAAGAATTAAAAAAAACTG+TGG + chr1.2:15907203-15907222 MS.gene63012:intron 15.0%
!! ATAAAATTCTTTACTATATC+GGG - chr1.2:15909234-15909253 None:intergenic 15.0%
!! GAAATTAAGAAAGAAAAAAT+TGG - chr1.2:15909061-15909080 None:intergenic 15.0%
!! TTAAATCTTCATTAATATGT+AGG + chr1.2:15909807-15909826 MS.gene63012:intron 15.0%
!!! AGTGATTATGATTTTAATTA+AGG + chr1.2:15909024-15909043 MS.gene63012:intron 15.0%
!!! ATATTTTTTGTTGAGATTTA+AGG - chr1.2:15908431-15908450 None:intergenic 15.0%
!!! ATCTAGAATATATACAAATT+AGG + chr1.2:15909429-15909448 MS.gene63012:intron 15.0%
!!! CGTCTTTTTATTATTATATT+TGG - chr1.2:15908446-15908465 None:intergenic 15.0%
!!! TAAATGGTTTTTTTTTTTTG+TGG + chr1.2:15908087-15908106 MS.gene63012:intron 15.0%
!!! TCAATTGATTTTATCTTTAT+TGG - chr1.2:15908614-15908633 None:intergenic 15.0%
!!! TCTAGAATATATACAAATTA+GGG + chr1.2:15909430-15909449 MS.gene63012:intron 15.0%
!!! TTACTAAAAATAGTGTTTTT+TGG + chr1.2:15908271-15908290 MS.gene63012:intron 15.0%
!! AAAAATTACTAGACTTAATG+TGG - chr1.2:15907683-15907702 None:intergenic 20.0%
!! AATTATGATTATTATTAGGC+GGG - chr1.2:15908360-15908379 None:intergenic 20.0%
!! AATTCTTTGTAGCAAATATT+GGG - chr1.2:15906822-15906841 None:intergenic 20.0%
!! ATGTTCATACAAAATGAAAT+AGG - chr1.2:15907019-15907038 None:intergenic 20.0%
!! ATTAATAAAATGCAACTTAC+TGG + chr1.2:15909404-15909423 MS.gene63012:intron 20.0%
!! ATTAGAGAATTCAAATTGTA+TGG + chr1.2:15907264-15907283 MS.gene63012:intron 20.0%
!! CAATTATGATTATTATTAGG+CGG - chr1.2:15908361-15908380 None:intergenic 20.0%
!! CACCAATTATGATTATTATT+AGG - chr1.2:15908364-15908383 None:intergenic 20.0%
!! CTAGAATATATACAAATTAG+GGG + chr1.2:15909431-15909450 MS.gene63012:intron 20.0%
!! TAGATAAAGTTAGCAAAAAA+GGG - chr1.2:15909281-15909300 None:intergenic 20.0%
!! TTAGAGAATTCAAATTGTAT+GGG + chr1.2:15907265-15907284 MS.gene63012:intron 20.0%
!! TTCCAAAATCCAAAAAAATA+CGG + chr1.2:15909677-15909696 MS.gene63012:CDS 20.0%
!! TTGGAATAATAATCTTCTTT+GGG - chr1.2:15909123-15909142 None:intergenic 20.0%
!!! AGTCTAGTAATTTTTTTCAA+AGG + chr1.2:15907688-15907707 MS.gene63012:intron 20.0%
!!! ATCGATCATATTTTTTAGTT+AGG + chr1.2:15909713-15909732 MS.gene63012:intron 20.0%
!!! GAATTTTATAGAGAATATCA+AGG + chr1.2:15909245-15909264 MS.gene63012:CDS 20.0%
!!! GTGTGATTTTTAAGAAAATA+GGG - chr1.2:15907402-15907421 None:intergenic 20.0%
!!! GTTTTATCATAGAAACAATA+TGG + chr1.2:15907311-15907330 MS.gene63012:intron 20.0%
!!! TCGATCATATTTTTTAGTTA+GGG + chr1.2:15909714-15909733 MS.gene63012:intron 20.0%
!!! TGTGATTTTTAAGAAAATAG+GGG - chr1.2:15907401-15907420 None:intergenic 20.0%
!!! TGTGTGATTTTTAAGAAAAT+AGG - chr1.2:15907403-15907422 None:intergenic 20.0%
!!! TTAATTCTTTTTTGAGGAAA+CGG - chr1.2:15907194-15907213 None:intergenic 20.0%
!!! TTTGGAATAATAATCTTCTT+TGG - chr1.2:15909124-15909143 None:intergenic 20.0%
!!! TTTTTGCTTATATTTTGAGA+CGG - chr1.2:15907731-15907750 None:intergenic 20.0%
!!! TTTTTTAGTTAGGGTATATT+TGG + chr1.2:15909723-15909742 MS.gene63012:intron 20.0%
! AACCATCTACTAGAATAATA+TGG + chr1.2:15909952-15909971 MS.gene63012:CDS 25.0%
! ACCAATATCAAATGTGTATA+AGG - chr1.2:15909148-15909167 None:intergenic 25.0%
! ACCATCTACTAGAATAATAT+GGG + chr1.2:15909953-15909972 MS.gene63012:CDS 25.0%
! ATTCTTTGTAGCAAATATTG+GGG - chr1.2:15906821-15906840 None:intergenic 25.0%
! ATTGATTGTACTGAATTTGA+AGG - chr1.2:15908910-15908929 None:intergenic 25.0%
! CAATTCTTTGTAGCAAATAT+TGG - chr1.2:15906823-15906842 None:intergenic 25.0%
! CATTTCCTCAAAAAACAAAA+AGG + chr1.2:15907508-15907527 MS.gene63012:intron 25.0%
! CGCCTAATAATAATCATAAT+TGG + chr1.2:15908359-15908378 MS.gene63012:intron 25.0%
! CTATGAAATCAAGAATGATT+CGG - chr1.2:15906978-15906997 None:intergenic 25.0%
! GACAATGCATAATATATACA+AGG - chr1.2:15908135-15908154 None:intergenic 25.0%
! GGAGAAATCATAAACATAAA+TGG + chr1.2:15909900-15909919 MS.gene63012:CDS 25.0%
! GTAGATAAAGTTAGCAAAAA+AGG - chr1.2:15909282-15909301 None:intergenic 25.0%
! GTGGTTTAACTAAAAAACAA+TGG - chr1.2:15907664-15907683 None:intergenic 25.0%
! TGGAATAATAATCTTCTTTG+GGG - chr1.2:15909122-15909141 None:intergenic 25.0%
! TTGATTGTACTGAATTTGAA+GGG - chr1.2:15908909-15908928 None:intergenic 25.0%
! TTTGTGCTGAAGAAAAAAAA+TGG - chr1.2:15908748-15908767 None:intergenic 25.0%
!! AATTTCAAAATTTTCTTGCC+AGG + chr1.2:15909075-15909094 MS.gene63012:intron 25.0%
!! ACGAATTTTTCCTTGTATTT+TGG + chr1.2:15907812-15907831 MS.gene63012:intron 25.0%
!! CGAATTTTTCCTTGTATTTT+GGG + chr1.2:15907813-15907832 MS.gene63012:intron 25.0%
!! GTTTTGTCGTATAAATATGA+GGG - chr1.2:15907862-15907881 None:intergenic 25.0%
!! TCTCTAATGAATTTTGCTTT+TGG - chr1.2:15908947-15908966 None:intergenic 25.0%
!! TGTTTTGTCGTATAAATATG+AGG - chr1.2:15907863-15907882 None:intergenic 25.0%
!! TTTCCTGCAATATTTAACTT+TGG + chr1.2:15906847-15906866 MS.gene63012:CDS 25.0%
!!! ACTTTTTTCAATAGATCAAC+TGG + chr1.2:15906937-15906956 MS.gene63012:CDS 25.0%
!!! ATGGTTTTTTTTTTTTGTGG+TGG + chr1.2:15908090-15908109 MS.gene63012:intron 25.0%
!!! ATTAGAGAACTTAAGTTGAA+TGG - chr1.2:15907923-15907942 None:intergenic 25.0%
!!! TTAGAGAACTTAAGTTGAAT+GGG - chr1.2:15907922-15907941 None:intergenic 25.0%
AAATGGTACAAACATTGTTG+TGG + chr1.2:15909917-15909936 MS.gene63012:CDS 30.0%
AATGGTACAAACATTGTTGT+GGG + chr1.2:15909918-15909937 MS.gene63012:CDS 30.0%
AGAAACGTATTTCTCTCATT+AGG - chr1.2:15907992-15908011 None:intergenic 30.0%
AGTCCATATCTTAATTCTCT+AGG + chr1.2:15908788-15908807 MS.gene63012:CDS 30.0%
ATACTCTTATAGTAGATGCA+CGG - chr1.2:15908033-15908052 None:intergenic 30.0%
ATCAAATGTGTATAAGGCTT+TGG - chr1.2:15909142-15909161 None:intergenic 30.0%
ATTAAGATATGGACTTAGGT+AGG - chr1.2:15908783-15908802 None:intergenic 30.0%
CATAATATATACAAGGTCCA+GGG - chr1.2:15908128-15908147 None:intergenic 30.0%
CATTCAAACAACTATTTGTG+TGG + chr1.2:15907129-15907148 MS.gene63012:intron 30.0%
CCATTGGGTATAATACTATT+AGG - chr1.2:15908869-15908888 None:intergenic 30.0%
CCTAATAGTATTATACCCAA+TGG + chr1.2:15908866-15908885 MS.gene63012:CDS 30.0%
CCTCAAAAAACAAAAAGGTT+TGG + chr1.2:15907513-15907532 MS.gene63012:intron 30.0%
CGAATCATTCTTGATTTCAT+AGG + chr1.2:15906976-15906995 MS.gene63012:CDS 30.0%
CTTTATAGCAGATGGAAAAT+TGG - chr1.2:15909513-15909532 None:intergenic 30.0%
GAGAATTAAGATATGGACTT+AGG - chr1.2:15908787-15908806 None:intergenic 30.0%
GATCCTAGAGAATTAAGATA+TGG - chr1.2:15908794-15908813 None:intergenic 30.0%
GCAAAATTCATTAGAGATCA+AGG + chr1.2:15908950-15908969 MS.gene63012:CDS 30.0%
GCCTTATACACATTTGATAT+TGG + chr1.2:15909144-15909163 MS.gene63012:CDS 30.0%
GTTCTCTAATGAGAGAAATA+CGG + chr1.2:15907933-15907952 MS.gene63012:intron 30.0%
TACTGAATTTGAAGGGAAAA+TGG - chr1.2:15908902-15908921 None:intergenic 30.0%
TCCCATATTATTCTAGTAGA+TGG - chr1.2:15909957-15909976 None:intergenic 30.0%
TCTACTAGAATAATATGGGA+TGG + chr1.2:15909957-15909976 MS.gene63012:CDS 30.0%
TGGAAAATTGGCCAAATTAA+AGG - chr1.2:15909501-15909520 None:intergenic 30.0%
TGTTAAATAAGAAGCTCACA+TGG + chr1.2:15908637-15908656 MS.gene63012:intron 30.0%
TTAAGATATGGACTTAGGTA+GGG - chr1.2:15908782-15908801 None:intergenic 30.0%
TTCTTTGTAGCAAATATTGG+GGG - chr1.2:15906820-15906839 None:intergenic 30.0%
TTGAAAAAAGTCTCTCCATT+TGG - chr1.2:15906928-15906947 None:intergenic 30.0%
! CAATTTTCCATCTGCTATAA+AGG + chr1.2:15909511-15909530 MS.gene63012:intron 30.0%
! CTAGTATTCGTGTATTGATA+AGG - chr1.2:15907605-15907624 None:intergenic 30.0%
!! AAATGGACTAAACATTCCAT+TGG - chr1.2:15908885-15908904 None:intergenic 30.0%
!! AATGGACTAAACATTCCATT+GGG - chr1.2:15908884-15908903 None:intergenic 30.0%
!! AGTCATCATTTCTTTTTCGT+TGG + chr1.2:15907462-15907481 MS.gene63012:intron 30.0%
!! GTTTGATGATGTATCTTCTA+CGG - chr1.2:15907574-15907593 None:intergenic 30.0%
!! TGTTCATCACTTTTGAAAAG+TGG + chr1.2:15907056-15907075 MS.gene63012:intron 30.0%
!! TTTTAAGAAAATAGGGGTGA+GGG - chr1.2:15907395-15907414 None:intergenic 30.0%
!! TTTTTAAGAAAATAGGGGTG+AGG - chr1.2:15907396-15907415 None:intergenic 30.0%
!!! CACCGTATTTTTTTGGATTT+TGG - chr1.2:15909682-15909701 None:intergenic 30.0%
!!! CCAAACCTTTTTGTTTTTTG+AGG - chr1.2:15907516-15907535 None:intergenic 30.0%
!!! TTTGTCTCACCGTATTTTTT+TGG - chr1.2:15909689-15909708 None:intergenic 30.0%
!!! TTTTGGAAAAGAGAGTACTT+AGG - chr1.2:15909665-15909684 None:intergenic 30.0%
!!! TTTTTTTTTTTGTGGTGGCT+GGG + chr1.2:15908095-15908114 MS.gene63012:intron 30.0%
!!! TTTTTTTTTTTTGTGGTGGC+TGG + chr1.2:15908094-15908113 MS.gene63012:intron 30.0%
ACACTATATAGAAGCTCACA+TGG + chr1.2:15908672-15908691 MS.gene63012:intron 35.0%
ATATATACAAATTAGGGGCC+AGG + chr1.2:15909436-15909455 MS.gene63012:CDS 35.0%
CAAAACACAAAGATATCAGC+AGG + chr1.2:15908385-15908404 MS.gene63012:intron 35.0%
GATAAAACATGATCATGTGC+TGG - chr1.2:15907299-15907318 None:intergenic 35.0%
GCACCAAAGTTAAATATTGC+AGG - chr1.2:15906853-15906872 None:intergenic 35.0%
GCATAATATATACAAGGTCC+AGG - chr1.2:15908129-15908148 None:intergenic 35.0%
GTCTTTGATCAAATCTCTAC+TGG + chr1.2:15910011-15910030 MS.gene63012:CDS 35.0%
GTTAGGGTATATTTGGATTG+TGG + chr1.2:15909730-15909749 MS.gene63012:intron 35.0%
TATAACATTCGTGCTAGATG+TGG + chr1.2:15909879-15909898 MS.gene63012:CDS 35.0%
TGGCACAAATAGAGTTTCTT+AGG + chr1.2:15906749-15906768 MS.gene63012:CDS 35.0%
TTGGATGTGTGCCTTTAATT+TGG + chr1.2:15909487-15909506 MS.gene63012:intron 35.0%
TTGTAACATGCCCTATTTAG+TGG - chr1.2:15910059-15910078 None:intergenic 35.0%
! ATTAAAGGCACACATCCAAT+TGG - chr1.2:15909486-15909505 None:intergenic 35.0%
! CTGCTGATATCTTTGTGTTT+TGG - chr1.2:15908387-15908406 None:intergenic 35.0%
! TCAACTGGAAGATTTTCTGA+TGG + chr1.2:15906952-15906971 MS.gene63012:CDS 35.0%
! TCATTTTGGATACACAACAC+TGG + chr1.2:15909459-15909478 MS.gene63012:CDS 35.0%
! TTCAAAATTTTCTTGCCAGG+AGG + chr1.2:15909078-15909097 MS.gene63012:intron 35.0%
! TTTTCTTCAGCACAAAGCTT+TGG + chr1.2:15908752-15908771 MS.gene63012:intron 35.0%
!!! GATCTTACTGCTGGTTTTTT+TGG + chr1.2:15909174-15909193 MS.gene63012:CDS 35.0%
!!! TTTTTTTTTTGTGGTGGCTG+GGG + chr1.2:15908096-15908115 MS.gene63012:intron 35.0%
AAATGCTGATACTGGTGGTT+TGG + chr1.2:15906876-15906895 MS.gene63012:CDS 40.0%
AATGTTGCAAATACACCTCC+TGG - chr1.2:15909096-15909115 None:intergenic 40.0%
ACATATGTGATTGCAGCTAG+TGG - chr1.2:15909629-15909648 None:intergenic 40.0%
ACATGCCCTATTTAGTGGAA+TGG - chr1.2:15910054-15910073 None:intergenic 40.0%
ATACACAACACTGGACCAAT+TGG + chr1.2:15909468-15909487 MS.gene63012:CDS 40.0%
ATCCTCCCATTCCACTAAAT+AGG + chr1.2:15910045-15910064 MS.gene63012:CDS 40.0%
CATGCCCTATTTAGTGGAAT+GGG - chr1.2:15910053-15910072 None:intergenic 40.0%
CTAGGATCAAACTTCACACA+TGG + chr1.2:15908806-15908825 MS.gene63012:CDS 40.0%
GATCTATCGTTACGCCATTT+AGG - chr1.2:15908192-15908211 None:intergenic 40.0%
GATCTCTTATCGTAGATGCA+TGG + chr1.2:15907151-15907170 MS.gene63012:intron 40.0%
GGTCAAAATGATCTTACTGC+TGG + chr1.2:15909165-15909184 MS.gene63012:CDS 40.0%
GTGCGTGCAACTATAATCTT+TGG + chr1.2:15907888-15907907 MS.gene63012:intron 40.0%
GTTGTGTATCCAAAATGACC+TGG - chr1.2:15909457-15909476 None:intergenic 40.0%
TCCATCAGTCCCAAAATACA+AGG - chr1.2:15907825-15907844 None:intergenic 40.0%
TCCTCCCATTCCACTAAATA+GGG + chr1.2:15910046-15910065 MS.gene63012:CDS 40.0%
TCTCTCATTAGGTAGATGCT+CGG - chr1.2:15907981-15908000 None:intergenic 40.0%
TCTGCTATAAAGGATAGCCA+AGG + chr1.2:15909521-15909540 MS.gene63012:intron 40.0%
TGGCTATCCTTTATAGCAGA+TGG - chr1.2:15909521-15909540 None:intergenic 40.0%
TGTATTGCTTTGCACAACCT+TGG - chr1.2:15909541-15909560 None:intergenic 40.0%
!!! TCCTTGTATTTTGGGACTGA+TGG + chr1.2:15907821-15907840 MS.gene63012:intron 40.0%
AGGATTTGAGCTACCACATG+TGG + chr1.2:15909827-15909846 MS.gene63012:intron 45.0%
ATCCACACGAAGTTGAGCTA+GGG - chr1.2:15909603-15909622 None:intergenic 45.0%
CAAGCACTTCAGTTGCCAAA+TGG + chr1.2:15906910-15906929 MS.gene63012:CDS 45.0%
CACGACGACTCTTTCCTAAA+TGG + chr1.2:15908175-15908194 MS.gene63012:intron 45.0%
GCTTCAAATGCTGATACTGG+TGG + chr1.2:15906871-15906890 MS.gene63012:CDS 45.0%
GGATGGTACACATTACACAG+AGG + chr1.2:15909974-15909993 MS.gene63012:CDS 45.0%
GGTGCTTCAAATGCTGATAC+TGG + chr1.2:15906868-15906887 MS.gene63012:CDS 45.0%
GTGCAAACTTTGCAACAGCA+GGG + chr1.2:15908828-15908847 MS.gene63012:CDS 45.0%
! AATTAGGGGCCAGGTCATTT+TGG + chr1.2:15909445-15909464 MS.gene63012:CDS 45.0%
! TGAGCTTAGCTAAGTTGGCA+TGG - chr1.2:15908157-15908176 None:intergenic 45.0%
! TGGCAACTGAAGTGCTTGAA+AGG - chr1.2:15906908-15906927 None:intergenic 45.0%
!! ATGCTCGGTGCAACAATTGT+GGG - chr1.2:15907966-15907985 None:intergenic 45.0%
!! TTTTGAGGAAACGGTCTCCA+TGG - chr1.2:15907185-15907204 None:intergenic 45.0%
!! TTTATTAATATATATAACAA+GGG - chr1.2:15909393-15909412 None:intergenic 5.0%
!!! TTTTATTAATATATATAACA+AGG - chr1.2:15909394-15909413 None:intergenic 5.0%
CATGTGGCATGTTGTGGCTA+TGG + chr1.2:15909843-15909862 MS.gene63012:CDS 50.0%
CGTCGTGAGCTTAGCTAAGT+TGG - chr1.2:15908162-15908181 None:intergenic 50.0%
CTACCACATGTGGCATGTTG+TGG + chr1.2:15909837-15909856 MS.gene63012:CDS 50.0%
GATCCACACGAAGTTGAGCT+AGG - chr1.2:15909604-15909623 None:intergenic 50.0%
GATGCACGGTGCAACAATTG+TGG - chr1.2:15908019-15908038 None:intergenic 50.0%
GATGCATGGTGCAACAACCA+TGG + chr1.2:15907165-15907184 MS.gene63012:intron 50.0%
GCCCTATTTAGTGGAATGGG+AGG - chr1.2:15910050-15910069 None:intergenic 50.0%
GGTGCAAACTTTGCAACAGC+AGG + chr1.2:15908827-15908846 MS.gene63012:CDS 50.0%
TAGCCACAACATGCCACATG+TGG - chr1.2:15909843-15909862 None:intergenic 50.0%
!! GATGCTCGGTGCAACAATTG+TGG - chr1.2:15907967-15907986 None:intergenic 50.0%
!! TGCTCGGTGCAACAATTGTG+GGG - chr1.2:15907965-15907984 None:intergenic 50.0%
AGCCCTAGCTCAACTTCGTG+TGG + chr1.2:15909598-15909617 MS.gene63012:CDS 55.0%
GTGGCATGTTGTGGCTATGG+AGG + chr1.2:15909846-15909865 MS.gene63012:CDS 55.0%
GGTGGCTGGGGTTTGAACCC+TGG + chr1.2:15908108-15908127 MS.gene63012:intron 65.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 15906748 15910085 15906748 ID=MS.gene63012
chr1.2 mRNA 15906748 15910085 15906748 ID=MS.gene63012.t1;Parent=MS.gene63012
chr1.2 exon 15906748 15906997 15906748 ID=MS.gene63012.t1.exon1;Parent=MS.gene63012.t1
chr1.2 CDS 15906748 15906997 15906748 ID=cds.MS.gene63012.t1;Parent=MS.gene63012.t1
chr1.2 exon 15908762 15908971 15908762 ID=MS.gene63012.t1.exon2;Parent=MS.gene63012.t1
chr1.2 CDS 15908762 15908971 15908762 ID=cds.MS.gene63012.t1;Parent=MS.gene63012.t1
chr1.2 exon 15909097 15909266 15909097 ID=MS.gene63012.t1.exon3;Parent=MS.gene63012.t1
chr1.2 CDS 15909097 15909266 15909097 ID=cds.MS.gene63012.t1;Parent=MS.gene63012.t1
chr1.2 exon 15909435 15909494 15909435 ID=MS.gene63012.t1.exon4;Parent=MS.gene63012.t1
chr1.2 CDS 15909435 15909494 15909435 ID=cds.MS.gene63012.t1;Parent=MS.gene63012.t1
chr1.2 exon 15909533 15909698 15909533 ID=MS.gene63012.t1.exon5;Parent=MS.gene63012.t1
chr1.2 CDS 15909533 15909698 15909533 ID=cds.MS.gene63012.t1;Parent=MS.gene63012.t1
chr1.2 exon 15909829 15910085 15909829 ID=MS.gene63012.t1.exon6;Parent=MS.gene63012.t1
chr1.2 CDS 15909829 15910085 15909829 ID=cds.MS.gene63012.t1;Parent=MS.gene63012.t1
Gene Sequence

>MS.gene63012

ATGGCACAAATAGAGTTTCTTAGGCACATGTCACTTGTGTATTTGATTGTGCTTATTTTATGTTCTACACCCCCAATATTTGCTACAAAGAATTGTGATTTTCCTGCAATATTTAACTTTGGTGCTTCAAATGCTGATACTGGTGGTTTGGCTGCTGCCTTTCAAGCACTTCAGTTGCCAAATGGAGAGACTTTTTTCAATAGATCAACTGGAAGATTTTCTGATGGCCGAATCATTCTTGATTTCATAGGTAATATTGTTTTTTTTTCCTATTTCATTTTGTATGAACATATCTAATGTTTTTATTGTGTTCATCACTTTTGAAAAGTGGTCAAAGAGAATGCTTTTTTTAAATCACTTTTGATATTGTATTTAGACATACATTCAAACAACTATTTGTGTGGATCTCTTATCGTAGATGCATGGTGCAACAACCATGGAGACCGTTTCCTCAAAAAAGAATTAAAAAAAACTGTGGAGACAGTTAGATTTAGAGAAAAATCACAAATTTCTCTCATTAGAGAATTCAAATTGTATGGGATTCAAGTCCAGCACATGATCATGTTTTATCATAGAAACAATATGGTTTAAGTTGTACATAGAAACATTTTTTTTTTTTTTTGTAGAATTACACTTTTATGCAACCCTCACCCCTATTTTCTTAAAAATCACACATTTAGATGAGTGAATAAAGATGAGAGCATCGTATTTGAGAGTCATCATTTCTTTTTCGTTGGACAATAAAAAAATGTTTAGTCAACATTTCCTCAAAAAACAAAAAGGTTTGGTTAACATATACGAAGTTGACTTCATTTGTAAAACACCGTAGAAGATACATCATCAAACTTTCAAGTCCTTATCAATACACGAATACTAGACAAGAAATTTCATTACATACGATATTATCTGCGCTCCATTGTTTTTTAGTTAAACCACATTAAGTCTAGTAATTTTTTTCAAAGGCAAAACATATACTCTCGCCGTCTCAAAATATAAGCAAAAATAAGTTAAAGAAATTGATGTATTTAGTACAAATTTTCAACTAAATACATTTATTTTTGTTGACGAATTTTTCCTTGTATTTTGGGACTGATGGAGTACATAACTTACACCCTCATATTTATACGACAAAACATGATCGTGCGTGCAACTATAATCTTTGGACTTGATTCCCATTCAACTTAAGTTCTCTAATGAGAGAAATACGGTTCTCTCCCCACAATTGTTGCACCGAGCATCTACCTAATGAGAGAAATACGTTTCTCTCTCCACAATTGTTGCACCGTGCATCTACTATAAGAGTATTAATTAATTTGGTTAATCTAATATTGATCTTTAATAAATGGTTTTTTTTTTTTGTGGTGGCTGGGGTTTGAACCCTGGACCTTGTATATATTATGCATTGTCCATGCCAACTTAGCTAAGCTCACGACGACTCTTTCCTAAATGGCGTAACGATAGATCCTTATTATTTTTTATAAAAAATAAATTTTATAATAACAAATATAATATGTTATCAAAATTTACTAAAAATAGTGTTTTTTGGAACAAGCAAAAATAATTTACTAAAAATAGTAAATTTAATATTAGAGAGTATACATATTAGACACCCGCCTAATAATAATCATAATTGGTGCCAAAACACAAAGATATCAGCAGGATAGTCACAAAAACAATTCACCTTAAATCTCAACAAAAAATATAATAATAAAAAGACGTCATATTCAACTATTTTCAAAACTTAAATTAAAAAAATTCTTATCTAAAACTAGTATAATTCCAAATATAATAATAAAAAGACGTCATATTCAACTATTTTCAAAACGTAAATTAAAAAAATTCTTATCTAAAACTAGTATAATTCCAATAAAGATAAAATCAATTGACTTTGTTAAATAAGAAGCTCACATGGTTTTACAAATAAACACTATATAGAAGCTCACATGGTTTTACAACAATGAAAATTATTTCTATATTTATGAAGGGTTTTAATTGTACCATTTTTTTTCTTCAGCACAAAGCTTTGGACTTCCCTACCTAAGTCCATATCTTAATTCTCTAGGATCAAACTTCACACATGGTGCAAACTTTGCAACAGCAGGGTCAACAATCAAAATTCCTAATAGTATTATACCCAATGGAATGTTTAGTCCATTTTCCCTTCAAATTCAGTACAATCAATTCAAAGATTTCATACCAAAAGCAAAATTCATTAGAGATCAAGGTAAATTAAGATTCTTTTTCATTGATTGTTTTTGTTCTCACTGAAATCTTTCAGTGATTATGATTTTAATTAAGGACACAAATTTGCCAATTTTTTCTTTCTTAATTTCAAAATTTTCTTGCCAGGAGGTGTATTTGCAACATTGATCCCCAAAGAAGATTATTATTCCAAAGCCTTATACACATTTGATATTGGTCAAAATGATCTTACTGCTGGTTTTTTTGGTAATAAGACTATACAACAAGTCAACGATACTATGCCCGATATAGTAAAGAATTTTATAGAGAATATCAAGGTAGTTCAAAACCCTTTTTTGCTAACTTTATCTACAATTACATAATCAAATAAATTAGTTCATGAACTATGAAAATCATACTCTATTTCTATAATATTAGATTTTTATTGTATTAGATTAATGCCCTTGTTATATATATTAATAAAATGCAACTTACTGGTGATCTAGAATATATACAAATTAGGGGCCAGGTCATTTTGGATACACAACACTGGACCAATTGGATGTGTGCCTTTAATTTGGCCAATTTTCCATCTGCTATAAAGGATAGCCAAGGTTGTGCAAAGCAATACAATGAAGTATCTCAATATTTTAATTTAAAGTTGAAGGAAGCCCTAGCTCAACTTCGTGTGGATCTTCCACTAGCTGCAATCACATATGTTGATATCTACTCTCCTAAGTACTCTCTTTTCCAAAATCCAAAAAAATACGGTGAGACAAATCAAATCGATCATATTTTTTAGTTAGGGTATATTTGGATTGTGGTACATTCACAAAATTATAGTGACATTGTGATTTTGTTTTAATTATGTTATTAATTTAAATCTTCATTAATATGTAGGATTTGAGCTACCACATGTGGCATGTTGTGGCTATGGAGGAGAGTATAACTATAACATTCGTGCTAGATGTGGAGAAATCATAAACATAAATGGTACAAACATTGTTGTGGGTTCATGTAAAAAACCATCTACTAGAATAATATGGGATGGTACACATTACACAGAGGCAGCTAACAAGATTGTCTTTGATCAAATCTCTACTGGAGCTTTTACAGATCCTCCCATTCCACTAAATAGGGCATGTTACAAAAAGTGA

Protein sequence

>MS.gene63012.t1

MAQIEFLRHMSLVYLIVLILCSTPPIFATKNCDFPAIFNFGASNADTGGLAAAFQALQLPNGETFFNRSTGRFSDGRIILDFIAQSFGLPYLSPYLNSLGSNFTHGANFATAGSTIKIPNSIIPNGMFSPFSLQIQYNQFKDFIPKAKFIRDQGGVFATLIPKEDYYSKALYTFDIGQNDLTAGFFGNKTIQQVNDTMPDIVKNFIENIKNIYKLGARSFWIHNTGPIGCDSQGCAKQYNEVSQYFNLKLKEALAQLRVDLPLAAITYVDIYSPKYSLFQNPKKYGFELPHVACCGYGGEYNYNIRARCGEIININGTNIVVGSCKKPSTRIIWDGTHYTEAANKIVFDQISTGAFTDPPIPLNRACYKK