Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70106.t1 | XP_003630591.1 | 97.2 | 327 | 6 | 1 | 1 | 327 | 1 | 324 | 2.20E-154 | 555.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70106.t1 | Q9SW18 | 67.0 | 294 | 86 | 4 | 39 | 327 | 25 | 312 | 3.9e-99 | 362.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70106.t1 | G7LIT9 | 97.2 | 327 | 6 | 1 | 1 | 327 | 1 | 324 | 1.6e-154 | 555.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene70106 | 0.83454 | 2.83E-56 | -1.69E-46 |
| MS.gene049173 | MS.gene70106 | 0.853583 | 2.17E-61 | -1.69E-46 |
| MS.gene049217 | MS.gene70106 | 0.880062 | 7.48E-70 | -1.69E-46 |
| MS.gene049222 | MS.gene70106 | 0.862928 | 3.58E-64 | -1.69E-46 |
| MS.gene049285 | MS.gene70106 | 0.906457 | 1.45E-80 | -1.69E-46 |
| MS.gene049320 | MS.gene70106 | 0.893937 | 3.95E-75 | -1.69E-46 |
| MS.gene049427 | MS.gene70106 | 0.868379 | 6.82E-66 | -1.69E-46 |
| MS.gene049609 | MS.gene70106 | 0.816372 | 5.72E-52 | -1.69E-46 |
| MS.gene049614 | MS.gene70106 | 0.888737 | 4.53E-73 | -1.69E-46 |
| MS.gene049615 | MS.gene70106 | 0.82621 | 3.07E-54 | -1.69E-46 |
| MS.gene049627 | MS.gene70106 | 0.850387 | 1.76E-60 | -1.69E-46 |
| MS.gene049805 | MS.gene70106 | 0.823109 | 1.65E-53 | -1.69E-46 |
| MS.gene049828 | MS.gene70106 | 0.842815 | 2.05E-58 | -1.69E-46 |
| MS.gene050076 | MS.gene70106 | 0.823723 | 1.19E-53 | -1.69E-46 |
| MS.gene05010 | MS.gene70106 | 0.817357 | 3.44E-52 | -1.69E-46 |
| MS.gene050163 | MS.gene70106 | 0.934093 | 6.88E-96 | -1.69E-46 |
| MS.gene050165 | MS.gene70106 | 0.920163 | 1.81E-87 | -1.69E-46 |
| MS.gene050333 | MS.gene70106 | 0.897946 | 8.58E-77 | -1.69E-46 |
| MS.gene050353 | MS.gene70106 | -0.831477 | 1.63E-55 | -1.69E-46 |
| MS.gene050432 | MS.gene70106 | 0.834553 | 2.80E-56 | -1.69E-46 |
| MS.gene050444 | MS.gene70106 | 0.820288 | 7.43E-53 | -1.69E-46 |
| MS.gene050475 | MS.gene70106 | -0.806294 | 8.82E-50 | -1.69E-46 |
| MS.gene050504 | MS.gene70106 | 0.877129 | 8.05E-69 | -1.69E-46 |
| MS.gene050518 | MS.gene70106 | 0.890672 | 7.97E-74 | -1.69E-46 |
| MS.gene050538 | MS.gene70106 | 0.805806 | 1.12E-49 | -1.69E-46 |
| MS.gene050577 | MS.gene70106 | 0.805735 | 1.16E-49 | -1.69E-46 |
| MS.gene050593 | MS.gene70106 | 0.801343 | 9.42E-49 | -1.69E-46 |
| MS.gene050612 | MS.gene70106 | 0.873234 | 1.72E-67 | -1.69E-46 |
| MS.gene050675 | MS.gene70106 | 0.861045 | 1.35E-63 | -1.69E-46 |
| MS.gene050699 | MS.gene70106 | 0.871318 | 7.49E-67 | -1.69E-46 |
| MS.gene050747 | MS.gene70106 | 0.821204 | 4.57E-53 | -1.69E-46 |
| MS.gene050767 | MS.gene70106 | 0.921297 | 4.28E-88 | -1.69E-46 |
| MS.gene050770 | MS.gene70106 | 0.923388 | 2.84E-89 | -1.69E-46 |
| MS.gene050772 | MS.gene70106 | 0.860921 | 1.47E-63 | -1.69E-46 |
| MS.gene050781 | MS.gene70106 | 0.828456 | 8.90E-55 | -1.69E-46 |
| MS.gene050783 | MS.gene70106 | 0.824044 | 9.99E-54 | -1.69E-46 |
| MS.gene050876 | MS.gene70106 | 0.817867 | 2.64E-52 | -1.69E-46 |
| MS.gene050950 | MS.gene70106 | 0.825442 | 4.68E-54 | -1.69E-46 |
| MS.gene050986 | MS.gene70106 | 0.86225 | 5.79E-64 | -1.69E-46 |
| MS.gene05100 | MS.gene70106 | 0.905668 | 3.37E-80 | -1.69E-46 |
| MS.gene05101 | MS.gene70106 | 0.834165 | 3.51E-56 | -1.69E-46 |
| MS.gene051228 | MS.gene70106 | 0.892291 | 1.82E-74 | -1.69E-46 |
| MS.gene051317 | MS.gene70106 | 0.805102 | 1.57E-49 | -1.69E-46 |
| MS.gene051434 | MS.gene70106 | 0.849781 | 2.59E-60 | -1.69E-46 |
| MS.gene051551 | MS.gene70106 | 0.832463 | 9.32E-56 | -1.69E-46 |
| MS.gene051564 | MS.gene70106 | 0.804254 | 2.36E-49 | -1.69E-46 |
| MS.gene051617 | MS.gene70106 | 0.806457 | 8.15E-50 | -1.69E-46 |
| MS.gene051666 | MS.gene70106 | 0.841443 | 4.74E-58 | -1.69E-46 |
| MS.gene051694 | MS.gene70106 | 0.85117 | 1.06E-60 | -1.69E-46 |
| MS.gene051810 | MS.gene70106 | 0.909269 | 6.86E-82 | -1.69E-46 |
| MS.gene051858 | MS.gene70106 | 0.845773 | 3.29E-59 | -1.69E-46 |
| MS.gene051949 | MS.gene70106 | 0.878919 | 1.90E-69 | -1.69E-46 |
| MS.gene052271 | MS.gene70106 | 0.925401 | 1.93E-90 | -1.69E-46 |
| MS.gene052290 | MS.gene70106 | 0.882251 | 1.22E-70 | -1.69E-46 |
| MS.gene052326 | MS.gene70106 | 0.843242 | 1.58E-58 | -1.69E-46 |
| MS.gene052379 | MS.gene70106 | 0.905518 | 3.94E-80 | -1.69E-46 |
| MS.gene052615 | MS.gene70106 | 0.821091 | 4.85E-53 | -1.69E-46 |
| MS.gene052670 | MS.gene70106 | 0.816014 | 6.88E-52 | -1.69E-46 |
| MS.gene052870 | MS.gene70106 | 0.814439 | 1.54E-51 | -1.69E-46 |
| MS.gene052872 | MS.gene70106 | 0.822508 | 2.28E-53 | -1.69E-46 |
| MS.gene052916 | MS.gene70106 | 0.832624 | 8.50E-56 | -1.69E-46 |
| MS.gene053009 | MS.gene70106 | 0.877358 | 6.70E-69 | -1.69E-46 |
| MS.gene053104 | MS.gene70106 | 0.835087 | 2.06E-56 | -1.69E-46 |
| MS.gene053107 | MS.gene70106 | 0.849037 | 4.18E-60 | -1.69E-46 |
| MS.gene053207 | MS.gene70106 | 0.847663 | 1.00E-59 | -1.69E-46 |
| MS.gene053213 | MS.gene70106 | 0.895008 | 1.44E-75 | -1.69E-46 |
| MS.gene053285 | MS.gene70106 | 0.800857 | 1.18E-48 | -1.69E-46 |
| MS.gene053286 | MS.gene70106 | 0.892261 | 1.87E-74 | -1.69E-46 |
| MS.gene053322 | MS.gene70106 | 0.912545 | 1.72E-83 | -1.69E-46 |
| MS.gene053384 | MS.gene70106 | 0.804448 | 2.15E-49 | -1.69E-46 |
| MS.gene053574 | MS.gene70106 | 0.81717 | 3.79E-52 | -1.69E-46 |
| MS.gene053632 | MS.gene70106 | 0.855857 | 4.76E-62 | -1.69E-46 |
| MS.gene053915 | MS.gene70106 | 0.800628 | 1.32E-48 | -1.69E-46 |
| MS.gene053916 | MS.gene70106 | 0.807549 | 4.79E-50 | -1.69E-46 |
| MS.gene054374 | MS.gene70106 | 0.823655 | 1.23E-53 | -1.69E-46 |
| MS.gene054376 | MS.gene70106 | 0.905132 | 5.93E-80 | -1.69E-46 |
| MS.gene054408 | MS.gene70106 | 0.80695 | 6.41E-50 | -1.69E-46 |
| MS.gene054600 | MS.gene70106 | 0.867586 | 1.23E-65 | -1.69E-46 |
| MS.gene054642 | MS.gene70106 | 0.916522 | 1.61E-85 | -1.69E-46 |
| MS.gene054802 | MS.gene70106 | 0.903764 | 2.47E-79 | -1.69E-46 |
| MS.gene054803 | MS.gene70106 | 0.903327 | 3.89E-79 | -1.69E-46 |
| MS.gene054804 | MS.gene70106 | 0.906562 | 1.30E-80 | -1.69E-46 |
| MS.gene054954 | MS.gene70106 | 0.866113 | 3.61E-65 | -1.69E-46 |
| MS.gene05505 | MS.gene70106 | 0.823778 | 1.15E-53 | -1.69E-46 |
| MS.gene055206 | MS.gene70106 | 0.821361 | 4.21E-53 | -1.69E-46 |
| MS.gene055212 | MS.gene70106 | 0.840584 | 7.96E-58 | -1.69E-46 |
| MS.gene055254 | MS.gene70106 | 0.877049 | 8.58E-69 | -1.69E-46 |
| MS.gene055362 | MS.gene70106 | 0.887246 | 1.69E-72 | -1.69E-46 |
| MS.gene055397 | MS.gene70106 | 0.932922 | 4.11E-95 | -1.69E-46 |
| MS.gene055412 | MS.gene70106 | 0.818069 | 2.38E-52 | -1.69E-46 |
| MS.gene055499 | MS.gene70106 | 0.927114 | 1.84E-91 | -1.69E-46 |
| MS.gene055502 | MS.gene70106 | 0.861115 | 1.29E-63 | -1.69E-46 |
| MS.gene055577 | MS.gene70106 | 0.843675 | 1.21E-58 | -1.69E-46 |
| MS.gene055634 | MS.gene70106 | 0.819048 | 1.43E-52 | -1.69E-46 |
| MS.gene055636 | MS.gene70106 | 0.879153 | 1.57E-69 | -1.69E-46 |
| MS.gene055638 | MS.gene70106 | 0.880864 | 3.86E-70 | -1.69E-46 |
| MS.gene055647 | MS.gene70106 | 0.891258 | 4.68E-74 | -1.69E-46 |
| MS.gene055722 | MS.gene70106 | 0.856374 | 3.36E-62 | -1.69E-46 |
| MS.gene055748 | MS.gene70106 | 0.821822 | 3.29E-53 | -1.69E-46 |
| MS.gene055751 | MS.gene70106 | 0.822577 | 2.20E-53 | -1.69E-46 |
| MS.gene055896 | MS.gene70106 | 0.822562 | 2.22E-53 | -1.69E-46 |
| MS.gene05592 | MS.gene70106 | 0.861986 | 6.98E-64 | -1.69E-46 |
| MS.gene055941 | MS.gene70106 | 0.839165 | 1.87E-57 | -1.69E-46 |
| MS.gene055956 | MS.gene70106 | -0.838897 | 2.19E-57 | -1.69E-46 |
| MS.gene056083 | MS.gene70106 | 0.876493 | 1.34E-68 | -1.69E-46 |
| MS.gene056374 | MS.gene70106 | 0.895809 | 6.73E-76 | -1.69E-46 |
| MS.gene056409 | MS.gene70106 | 0.818167 | 2.26E-52 | -1.69E-46 |
| MS.gene056410 | MS.gene70106 | 0.813858 | 2.07E-51 | -1.69E-46 |
| MS.gene056449 | MS.gene70106 | 0.827706 | 1.35E-54 | -1.69E-46 |
| MS.gene056510 | MS.gene70106 | 0.838758 | 2.38E-57 | -1.69E-46 |
| MS.gene056549 | MS.gene70106 | 0.838199 | 3.31E-57 | -1.69E-46 |
| MS.gene056609 | MS.gene70106 | 0.820457 | 6.79E-53 | -1.69E-46 |
| MS.gene056611 | MS.gene70106 | 0.806662 | 7.38E-50 | -1.69E-46 |
| MS.gene056657 | MS.gene70106 | 0.905678 | 3.33E-80 | -1.69E-46 |
| MS.gene056692 | MS.gene70106 | 0.836506 | 8.99E-57 | -1.69E-46 |
| MS.gene056897 | MS.gene70106 | 0.84604 | 2.79E-59 | -1.69E-46 |
| MS.gene056903 | MS.gene70106 | 0.810368 | 1.19E-50 | -1.69E-46 |
| MS.gene057011 | MS.gene70106 | 0.861755 | 8.21E-64 | -1.69E-46 |
| MS.gene057129 | MS.gene70106 | 0.924039 | 1.20E-89 | -1.69E-46 |
| MS.gene057146 | MS.gene70106 | 0.828341 | 9.49E-55 | -1.69E-46 |
| MS.gene057246 | MS.gene70106 | 0.858146 | 1.01E-62 | -1.69E-46 |
| MS.gene057295 | MS.gene70106 | 0.827577 | 1.45E-54 | -1.69E-46 |
| MS.gene057331 | MS.gene70106 | 0.854288 | 1.36E-61 | -1.69E-46 |
| MS.gene057416 | MS.gene70106 | 0.873725 | 1.18E-67 | -1.69E-46 |
| MS.gene057831 | MS.gene70106 | 0.831252 | 1.85E-55 | -1.69E-46 |
| MS.gene057926 | MS.gene70106 | 0.831321 | 1.78E-55 | -1.69E-46 |
| MS.gene058019 | MS.gene70106 | 0.850287 | 1.87E-60 | -1.69E-46 |
| MS.gene058293 | MS.gene70106 | 0.843077 | 1.75E-58 | -1.69E-46 |
| MS.gene058323 | MS.gene70106 | 0.878943 | 1.87E-69 | -1.69E-46 |
| MS.gene058419 | MS.gene70106 | 0.885812 | 5.89E-72 | -1.69E-46 |
| MS.gene058544 | MS.gene70106 | 0.84262 | 2.31E-58 | -1.69E-46 |
| MS.gene058660 | MS.gene70106 | 0.83661 | 8.46E-57 | -1.69E-46 |
| MS.gene058723 | MS.gene70106 | 0.872612 | 2.78E-67 | -1.69E-46 |
| MS.gene058773 | MS.gene70106 | 0.886242 | 4.05E-72 | -1.69E-46 |
| MS.gene05883 | MS.gene70106 | 0.820784 | 5.71E-53 | -1.69E-46 |
| MS.gene058903 | MS.gene70106 | 0.830489 | 2.85E-55 | -1.69E-46 |
| MS.gene059022 | MS.gene70106 | 0.880227 | 6.53E-70 | -1.69E-46 |
| MS.gene059023 | MS.gene70106 | 0.830216 | 3.33E-55 | -1.69E-46 |
| MS.gene059029 | MS.gene70106 | 0.896388 | 3.87E-76 | -1.69E-46 |
| MS.gene059079 | MS.gene70106 | 0.814205 | 1.73E-51 | -1.69E-46 |
| MS.gene059102 | MS.gene70106 | -0.822887 | 1.86E-53 | -1.69E-46 |
| MS.gene05913 | MS.gene70106 | 0.810959 | 8.89E-51 | -1.69E-46 |
| MS.gene05934 | MS.gene70106 | 0.834163 | 3.51E-56 | -1.69E-46 |
| MS.gene059536 | MS.gene70106 | 0.864877 | 8.86E-65 | -1.69E-46 |
| MS.gene059677 | MS.gene70106 | 0.904384 | 1.30E-79 | -1.69E-46 |
| MS.gene059718 | MS.gene70106 | 0.876105 | 1.82E-68 | -1.69E-46 |
| MS.gene059756 | MS.gene70106 | 0.844337 | 8.05E-59 | -1.69E-46 |
| MS.gene059801 | MS.gene70106 | 0.802863 | 4.58E-49 | -1.69E-46 |
| MS.gene059858 | MS.gene70106 | 0.890946 | 6.22E-74 | -1.69E-46 |
| MS.gene059865 | MS.gene70106 | 0.814505 | 1.49E-51 | -1.69E-46 |
| MS.gene059902 | MS.gene70106 | 0.844706 | 6.40E-59 | -1.69E-46 |
| MS.gene059960 | MS.gene70106 | 0.926173 | 6.74E-91 | -1.69E-46 |
| MS.gene060193 | MS.gene70106 | 0.854708 | 1.03E-61 | -1.69E-46 |
| MS.gene060336 | MS.gene70106 | -0.813306 | 2.74E-51 | -1.69E-46 |
| MS.gene060337 | MS.gene70106 | -0.818961 | 1.49E-52 | -1.69E-46 |
| MS.gene060341 | MS.gene70106 | 0.804027 | 2.63E-49 | -1.69E-46 |
| MS.gene060356 | MS.gene70106 | 0.83869 | 2.48E-57 | -1.69E-46 |
| MS.gene060703 | MS.gene70106 | 0.844907 | 5.65E-59 | -1.69E-46 |
| MS.gene060728 | MS.gene70106 | 0.822348 | 2.49E-53 | -1.69E-46 |
| MS.gene060762 | MS.gene70106 | 0.844999 | 5.34E-59 | -1.69E-46 |
| MS.gene06077 | MS.gene70106 | 0.833893 | 4.10E-56 | -1.69E-46 |
| MS.gene060804 | MS.gene70106 | 0.851634 | 7.81E-61 | -1.69E-46 |
| MS.gene060818 | MS.gene70106 | 0.823482 | 1.35E-53 | -1.69E-46 |
| MS.gene06092 | MS.gene70106 | 0.844871 | 5.78E-59 | -1.69E-46 |
| MS.gene061041 | MS.gene70106 | 0.821219 | 4.54E-53 | -1.69E-46 |
| MS.gene061134 | MS.gene70106 | 0.822795 | 1.96E-53 | -1.69E-46 |
| MS.gene061150 | MS.gene70106 | 0.904425 | 1.24E-79 | -1.69E-46 |
| MS.gene061171 | MS.gene70106 | 0.828863 | 7.10E-55 | -1.69E-46 |
| MS.gene061200 | MS.gene70106 | 0.92981 | 4.07E-93 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70106.t1 | MTR_8g100120 | 97.248 | 327 | 6 | 1 | 1 | 327 | 1 | 324 | 0.0 | 656 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70106.t1 | AT4G25080 | 73.810 | 294 | 66 | 4 | 39 | 327 | 39 | 326 | 1.34e-155 | 439 |
| MS.gene70106.t1 | AT4G25080 | 73.810 | 294 | 66 | 4 | 39 | 327 | 25 | 312 | 3.42e-155 | 437 |
| MS.gene70106.t1 | AT4G25080 | 73.810 | 294 | 66 | 4 | 39 | 327 | 25 | 312 | 3.42e-155 | 437 |
| MS.gene70106.t1 | AT4G25080 | 73.810 | 294 | 66 | 4 | 39 | 327 | 25 | 312 | 3.42e-155 | 437 |
| MS.gene70106.t1 | AT4G25080 | 73.810 | 294 | 66 | 4 | 39 | 327 | 25 | 312 | 3.42e-155 | 437 |
| MS.gene70106.t1 | AT4G25080 | 78.088 | 251 | 49 | 2 | 77 | 327 | 1 | 245 | 3.31e-145 | 409 |
Find 105 sgRNAs with CRISPR-Local
Find 173 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTGCTCACCTTGCTTCTT+TGG | 0.174968 | 4.1:+7047428 | MS.gene70106:CDS |
| TGTTCGCGTCGTCGTCTTTC+CGG | 0.201498 | 4.1:-7045894 | None:intergenic |
| CAACTTGTGTCCAGTGAAAA+TGG | 0.270170 | 4.1:+7047285 | MS.gene70106:CDS |
| CGCGATTGTTGTGCCGTCTA+TGG | 0.289010 | 4.1:-7045817 | None:intergenic |
| GGTGAGTGATTTAGAGAGTT+TGG | 0.296867 | 4.1:+7047335 | MS.gene70106:CDS |
| TTTGTTGTGGGTGGCGGGAG+AGG | 0.307225 | 4.1:-7045730 | None:intergenic |
| ATAGAGTTCAACGGGATATT+AGG | 0.312977 | 4.1:+7046021 | MS.gene70106:CDS |
| TGTGATGCTGGTTGTGGTAC+TGG | 0.330850 | 4.1:+7046119 | MS.gene70106:CDS |
| GCATCATAATAAAATGTCTT+AGG | 0.351793 | 4.1:-7047480 | None:intergenic |
| CAACGATGGAAGAAGATTTA+CGG | 0.365499 | 4.1:+7045981 | MS.gene70106:CDS |
| GAAAGATGAAGGGCCACTTC+AGG | 0.373746 | 4.1:+7046085 | MS.gene70106:CDS |
| GTTCGCGTCGTCGTCTTTCC+GGG | 0.385307 | 4.1:-7045893 | None:intergenic |
| TTGTGGGTGGCGGGAGAGGA+GGG | 0.387295 | 4.1:-7045726 | None:intergenic |
| GGAAAGACGACGACGCGAAC+AGG | 0.395017 | 4.1:+7045896 | MS.gene70106:CDS |
| GCAACAGCCGCCGACGTTAC+CGG | 0.402705 | 4.1:+7045792 | MS.gene70106:CDS |
| GTTGTGGGTGGCGGGAGAGG+AGG | 0.411029 | 4.1:-7045727 | None:intergenic |
| GGTGTTACTATTTGTGATGC+TGG | 0.416395 | 4.1:+7046107 | MS.gene70106:CDS |
| AAAGGGCGTTGCGCAAGGTT+GGG | 0.417723 | 4.1:+7047580 | MS.gene70106:CDS |
| GGTTGCTGAAGCTGAGAAAC+AGG | 0.419084 | 4.1:+7046208 | MS.gene70106:CDS |
| TAAGAGTTTGTTGTGGGTGG+CGG | 0.431253 | 4.1:-7045736 | None:intergenic |
| AGGGTTGGAGAGTTGTTCCC+TGG | 0.435316 | 4.1:+7047510 | MS.gene70106:CDS |
| ACAAACAACGGCACCTTCCT+TGG | 0.445026 | 4.1:-7046162 | None:intergenic |
| GTAAGCGGTGGCTTCGTCGC+TGG | 0.445724 | 4.1:+7045843 | MS.gene70106:CDS |
| TTACAGATGTTGAAAGATGA+AGG | 0.450243 | 4.1:+7046074 | MS.gene70106:CDS |
| AAATCACTCACCACAAACTT+TGG | 0.452354 | 4.1:-7047324 | None:intergenic |
| CTGGGCCTTCCAAGGCAACC+AGG | 0.466683 | 4.1:+7047529 | MS.gene70106:CDS |
| TGATGTTAATAGAGTTCAAC+GGG | 0.468337 | 4.1:+7046013 | MS.gene70106:CDS |
| ACTATTTGTGATGCTGGTTG+TGG | 0.469095 | 4.1:+7046113 | MS.gene70106:CDS |
| GAAAGGGCGTTGCGCAAGGT+TGG | 0.471715 | 4.1:+7047579 | MS.gene70106:CDS |
| CTGGTTGCCTTGGAAGGCCC+AGG | 0.472074 | 4.1:-7047528 | None:intergenic |
| AGTGATTTAGAGAGTTTGGA+TGG | 0.476634 | 4.1:+7047339 | MS.gene70106:CDS |
| GGGAGTATTTCAACAACAAC+GGG | 0.479355 | 4.1:+7045955 | MS.gene70106:CDS |
| AAAGATGAAGGGCCACTTCA+GGG | 0.481133 | 4.1:+7046086 | MS.gene70106:CDS |
| GTCGTCTTTCCGGGTCTGAA+AGG | 0.481970 | 4.1:-7045884 | None:intergenic |
| AAGAGTTTGTTGTGGGTGGC+GGG | 0.483942 | 4.1:-7045735 | None:intergenic |
| TAAAGCATTCTCAACAGTCT+TGG | 0.484120 | 4.1:-7046054 | None:intergenic |
| GGTTGTTAAGAGTTTGTTGT+GGG | 0.485748 | 4.1:-7045742 | None:intergenic |
| GTTCAACGGGATATTAGGTT+GGG | 0.491602 | 4.1:+7046026 | MS.gene70106:CDS |
| AGTTCAACGGGATATTAGGT+TGG | 0.497728 | 4.1:+7046025 | MS.gene70106:CDS |
| TTTATTATGATGCACTAAAG+AGG | 0.498288 | 4.1:+7047490 | MS.gene70106:CDS |
| TTACTTTGCCAAGCTTATTG+AGG | 0.499395 | 4.1:+7047641 | MS.gene70106:CDS |
| TTCTGAAGCAGATGTTGAAA+GGG | 0.501417 | 4.1:+7047563 | MS.gene70106:CDS |
| TCGTCTTTCCGGGTCTGAAA+GGG | 0.501629 | 4.1:-7045883 | None:intergenic |
| ACCACAAACTTTGGCATCGC+AGG | 0.503004 | 4.1:-7047315 | None:intergenic |
| AAGATATGCCCTGGTTGCCT+TGG | 0.503839 | 4.1:-7047538 | None:intergenic |
| TGGTTCTCTTTCGATTCCGT+TGG | 0.504285 | 4.1:+7046139 | MS.gene70106:CDS |
| ACGACGACGCGAACAGGCGG+AGG | 0.509203 | 4.1:+7045902 | MS.gene70106:CDS |
| TCGATTCCGTTGGCCAAGGA+AGG | 0.510765 | 4.1:+7046149 | MS.gene70106:CDS |
| ACCTGCGATGCCAAAGTTTG+TGG | 0.512251 | 4.1:+7047314 | MS.gene70106:CDS |
| GGTAACGTCGGCGGCTGTTG+CGG | 0.517328 | 4.1:-7045790 | None:intergenic |
| ATTCTGAAGCAGATGTTGAA+AGG | 0.518414 | 4.1:+7047562 | MS.gene70106:CDS |
| TATGCCCTGGTTGCCTTGGA+AGG | 0.522393 | 4.1:-7047534 | None:intergenic |
| ACTTCTCTCCCTTTCAGACC+CGG | 0.523310 | 4.1:+7045875 | MS.gene70106:CDS |
| TATGATGCACTAAAGAGGGT+TGG | 0.524966 | 4.1:+7047495 | MS.gene70106:CDS |
| GTTGTTCCCTGGGCCTTCCA+AGG | 0.535217 | 4.1:+7047521 | MS.gene70106:CDS |
| GGGCGTTGCGCAAGGTTGGG+TGG | 0.537359 | 4.1:+7047583 | MS.gene70106:CDS |
| GTCTATGGCGCCGGTAACGT+CGG | 0.538591 | 4.1:-7045802 | None:intergenic |
| GCGGCTGTTGCGGTTGAGAG+TGG | 0.540172 | 4.1:-7045780 | None:intergenic |
| TTATTATGATGCACTAAAGA+GGG | 0.543982 | 4.1:+7047491 | MS.gene70106:CDS |
| GCTGTTGCGGTTGAGAGTGG+AGG | 0.545699 | 4.1:-7045777 | None:intergenic |
| CGCGAACAGGCGGAGGAAGT+AGG | 0.545859 | 4.1:+7045909 | MS.gene70106:CDS |
| TCCCATCTGCTTTACTCTGA+GGG | 0.551667 | 4.1:-7047404 | None:intergenic |
| TTTCTCAGCTTCAGCAACCA+TGG | 0.556058 | 4.1:-7046204 | None:intergenic |
| GGGTTGGAGAGTTGTTCCCT+GGG | 0.560240 | 4.1:+7047511 | MS.gene70106:CDS |
| AGGAACAGCCTCAATAAGCT+TGG | 0.560754 | 4.1:-7047649 | None:intergenic |
| TGTTGAAAGGGCGTTGCGCA+AGG | 0.560806 | 4.1:+7047575 | MS.gene70106:CDS |
| TCTTTCGATTCCGTTGGCCA+AGG | 0.564426 | 4.1:+7046145 | MS.gene70106:CDS |
| AAGACGACGACGCGAACAGG+CGG | 0.569936 | 4.1:+7045899 | MS.gene70106:CDS |
| TGGTTGCCTTGGAAGGCCCA+GGG | 0.570031 | 4.1:-7047527 | None:intergenic |
| TGTTGTGCCGTCTATGGCGC+CGG | 0.571715 | 4.1:-7045811 | None:intergenic |
| TGGGCCTTCCAAGGCAACCA+GGG | 0.571898 | 4.1:+7047530 | MS.gene70106:CDS |
| TGGTTGTTAAGAGTTTGTTG+TGG | 0.572241 | 4.1:-7045743 | None:intergenic |
| GACGTTACCGGCGCCATAGA+CGG | 0.574011 | 4.1:+7045804 | MS.gene70106:CDS |
| ACAACAACGGGTTTCAACGA+TGG | 0.574622 | 4.1:+7045967 | MS.gene70106:CDS |
| TGTTAAGAGTTTGTTGTGGG+TGG | 0.574727 | 4.1:-7045739 | None:intergenic |
| GAGTGGAGGGATGGCGAATG+TGG | 0.575620 | 4.1:-7045763 | None:intergenic |
| AGGGAGAGAATGTAGCGAAA+CGG | 0.590209 | 4.1:-7045707 | None:intergenic |
| TACCCTCAGAGTAAAGCAGA+TGG | 0.593009 | 4.1:+7047402 | MS.gene70106:CDS |
| ATCCCATCTGCTTTACTCTG+AGG | 0.595461 | 4.1:-7047405 | None:intergenic |
| TACAGATGTTGAAAGATGAA+GGG | 0.602628 | 4.1:+7046075 | MS.gene70106:CDS |
| CAAATAGTAACACCCTGAAG+TGG | 0.608139 | 4.1:-7046098 | None:intergenic |
| CTGTTGCGGTTGAGAGTGGA+GGG | 0.608229 | 4.1:-7045776 | None:intergenic |
| ACGGCACCTTCCTTGGCCAA+CGG | 0.611174 | 4.1:-7046155 | None:intergenic |
| GGGTGGACGATAAAGAAGAA+AGG | 0.614466 | 4.1:+7047600 | MS.gene70106:CDS |
| TATGGCGCCGGTAACGTCGG+CGG | 0.621518 | 4.1:-7045799 | None:intergenic |
| TAGTGATATATCAGCTGCCA+TGG | 0.622099 | 4.1:+7046187 | MS.gene70106:CDS |
| ACAACAATCGCGGTCGTAAG+CGG | 0.623303 | 4.1:+7045828 | MS.gene70106:CDS |
| AGGGAGTATTTCAACAACAA+CGG | 0.626963 | 4.1:+7045954 | MS.gene70106:CDS |
| ACCCTCAGAGTAAAGCAGAT+GGG | 0.629699 | 4.1:+7047403 | MS.gene70106:CDS |
| GTGATGACAAAGAAGTTGTG+AGG | 0.636702 | 4.1:+7045934 | MS.gene70106:CDS |
| TGCGGTTGAGAGTGGAGGGA+TGG | 0.637524 | 4.1:-7045772 | None:intergenic |
| AACAAAGAGAGAAGACCACA+TGG | 0.638571 | 4.1:-7045664 | None:intergenic |
| ATGATGTTAATAGAGTTCAA+CGG | 0.639280 | 4.1:+7046012 | MS.gene70106:CDS |
| TTCAGAATGAAGATATGCCC+TGG | 0.639551 | 4.1:-7047547 | None:intergenic |
| TGATGACAAAGAAGTTGTGA+GGG | 0.644653 | 4.1:+7045935 | MS.gene70106:CDS |
| ACAATCGCGGTCGTAAGCGG+TGG | 0.652916 | 4.1:+7045831 | MS.gene70106:CDS |
| ATCCTCTGGACTCACTACAT+AGG | 0.659752 | 4.1:-7047669 | None:intergenic |
| GTCTGAAAGGGAGAGAAGTG+CGG | 0.675558 | 4.1:-7045871 | None:intergenic |
| CATAGACGGCACAACAATCG+CGG | 0.676803 | 4.1:+7045818 | MS.gene70106:CDS |
| GGATGGATTGTACGATACAG+TGG | 0.678861 | 4.1:+7047356 | MS.gene70106:CDS |
| GAACAGGCGGAGGAAGTAGG+CGG | 0.681114 | 4.1:+7045912 | MS.gene70106:CDS |
| TATATCACTAGCACAAACAA+CGG | 0.690655 | 4.1:-7046174 | None:intergenic |
| TGGCGTTCTCATCATCCATG+TGG | 0.707884 | 4.1:+7045649 | MS.gene70106:CDS |
| AAAGGGAGAGAAGTGCGGTG+AGG | 0.719705 | 4.1:-7045866 | None:intergenic |
| GGTAATGAATCATAACATCG+AGG | 0.752533 | 4.1:-7047383 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCAAAAATCATAAATATCAA+AGG | - | chr4.1:7046248-7046267 | None:intergenic | 15.0% |
| !! | TTATATAAATAGGAAGATTA+TGG | + | chr4.1:7046706-7046725 | MS.gene70106:intron | 15.0% |
| !!! | ATTTTATCATATCTAAGTTT+TGG | - | chr4.1:7046371-7046390 | None:intergenic | 15.0% |
| !! | AGAGAAGGATTTATATAAAT+AGG | + | chr4.1:7046696-7046715 | MS.gene70106:intron | 20.0% |
| !! | GACAATAATAATGTAATCAT+TGG | + | chr4.1:7047083-7047102 | MS.gene70106:intron | 20.0% |
| ! | ATGATGTTAATAGAGTTCAA+CGG | + | chr4.1:7046012-7046031 | MS.gene70106:CDS | 25.0% |
| ! | CAATTGATGTTTGTAAACAT+CGG | - | chr4.1:7046592-7046611 | None:intergenic | 25.0% |
| ! | GCATCATAATAAAATGTCTT+AGG | - | chr4.1:7047483-7047502 | None:intergenic | 25.0% |
| ! | TTATTATGATGCACTAAAGA+GGG | + | chr4.1:7047491-7047510 | MS.gene70106:CDS | 25.0% |
| ! | TTATTGTCAGACATTGTAAA+AGG | - | chr4.1:7047071-7047090 | None:intergenic | 25.0% |
| ! | TTTATTATGATGCACTAAAG+AGG | + | chr4.1:7047490-7047509 | MS.gene70106:CDS | 25.0% |
| !! | CGTGAATATCATTTTGTAAA+CGG | - | chr4.1:7046565-7046584 | None:intergenic | 25.0% |
| !! | TTTAGACAATTTGAAATACC+CGG | - | chr4.1:7047166-7047185 | None:intergenic | 25.0% |
| !!! | AGTCGCAACTTTTTTTTTTT+AGG | - | chr4.1:7046793-7046812 | None:intergenic | 25.0% |
| !!! | GTCGCAACTTTTTTTTTTTA+GGG | - | chr4.1:7046792-7046811 | None:intergenic | 25.0% |
| !!! | GTTTTGAATGAATTTGACTT+TGG | - | chr4.1:7047190-7047209 | None:intergenic | 25.0% |
| !!! | TAAGTTGTTTTTGTTAGAGA+AGG | + | chr4.1:7046681-7046700 | MS.gene70106:intron | 25.0% |
| !!! | TCGCAACTTTTTTTTTTTAG+GGG | - | chr4.1:7046791-7046810 | None:intergenic | 25.0% |
| !!! | TGCTTTGATAAAAAGTGTTT+TGG | - | chr4.1:7046935-7046954 | None:intergenic | 25.0% |
| !!! | TTGATAAAAAGTGTTTTGGT+AGG | - | chr4.1:7046931-7046950 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTTAGGGGAATAG+AGG | - | chr4.1:7046783-7046802 | None:intergenic | 25.0% |
| ATCATGTTAGAGGTTAGAAT+AGG | + | chr4.1:7046642-7046661 | MS.gene70106:intron | 30.0% | |
| CTAAAATAACGCTTCACATA+CGG | - | chr4.1:7046317-7046336 | None:intergenic | 30.0% | |
| GTCATGGGTCAAATTTAATA+GGG | - | chr4.1:7046982-7047001 | None:intergenic | 30.0% | |
| TACAGATGTTGAAAGATGAA+GGG | + | chr4.1:7046075-7046094 | MS.gene70106:CDS | 30.0% | |
| TATATCACTAGCACAAACAA+CGG | - | chr4.1:7046177-7046196 | None:intergenic | 30.0% | |
| TCATGTTAGAGGTTAGAATA+GGG | + | chr4.1:7046643-7046662 | MS.gene70106:intron | 30.0% | |
| TGAATATCGTAGAACAATAG+CGG | + | chr4.1:7046447-7046466 | MS.gene70106:intron | 30.0% | |
| TGATGTTAATAGAGTTCAAC+GGG | + | chr4.1:7046013-7046032 | MS.gene70106:CDS | 30.0% | |
| TTACAGATGTTGAAAGATGA+AGG | + | chr4.1:7046074-7046093 | MS.gene70106:CDS | 30.0% | |
| TTCAAACACACAAACTAACA+CGG | + | chr4.1:7047230-7047249 | MS.gene70106:intron | 30.0% | |
| TTCTGTTCCATTCAATTCTT+AGG | + | chr4.1:7046885-7046904 | MS.gene70106:intron | 30.0% | |
| AAATCACTCACCACAAACTT+TGG | - | chr4.1:7047327-7047346 | None:intergenic | 35.0% | |
| AACCTCTAACATGATGTGTT+AGG | - | chr4.1:7046637-7046656 | None:intergenic | 35.0% | |
| AGTGATTTAGAGAGTTTGGA+TGG | + | chr4.1:7047339-7047358 | MS.gene70106:CDS | 35.0% | |
| ATAGAGTTCAACGGGATATT+AGG | + | chr4.1:7046021-7046040 | MS.gene70106:CDS | 35.0% | |
| ATAGCTGTTATTCGACAACA+CGG | + | chr4.1:7046414-7046433 | MS.gene70106:intron | 35.0% | |
| ATGAGAGAATCTCTCCTTAA+AGG | - | chr4.1:7046833-7046852 | None:intergenic | 35.0% | |
| ATTAAATTTGACCCATGACC+AGG | + | chr4.1:7046983-7047002 | MS.gene70106:intron | 35.0% | |
| CAACGATGGAAGAAGATTTA+CGG | + | chr4.1:7045981-7046000 | MS.gene70106:CDS | 35.0% | |
| GGTAATGAATCATAACATCG+AGG | - | chr4.1:7047386-7047405 | None:intergenic | 35.0% | |
| GGTCATGGGTCAAATTTAAT+AGG | - | chr4.1:7046983-7047002 | None:intergenic | 35.0% | |
| TGATGACAAAGAAGTTGTGA+GGG | + | chr4.1:7045935-7045954 | MS.gene70106:CDS | 35.0% | |
| TGTCAGACATTGTAAAAGGA+GGG | - | chr4.1:7047067-7047086 | None:intergenic | 35.0% | |
| TTAAATTTGACCCATGACCA+GGG | + | chr4.1:7046984-7047003 | MS.gene70106:intron | 35.0% | |
| TTACTTTGCCAAGCTTATTG+AGG | + | chr4.1:7047641-7047660 | MS.gene70106:CDS | 35.0% | |
| TTAGGGACCTAAGAATTGAA+TGG | - | chr4.1:7046895-7046914 | None:intergenic | 35.0% | |
| TTCCTAACACATCATGTTAG+AGG | + | chr4.1:7046632-7046651 | MS.gene70106:intron | 35.0% | |
| TTGTCAGACATTGTAAAAGG+AGG | - | chr4.1:7047068-7047087 | None:intergenic | 35.0% | |
| TTGTGAAAGGGAAACCTTTA+AGG | + | chr4.1:7046816-7046835 | MS.gene70106:intron | 35.0% | |
| ! | AAGTGTGTTTTTCACTTTGC+AGG | + | chr4.1:7047254-7047273 | MS.gene70106:intron | 35.0% |
| ! | TAAAGCATTCTCAACAGTCT+TGG | - | chr4.1:7046057-7046076 | None:intergenic | 35.0% |
| ! | TGTGTTAGGAAGCACAATTA+CGG | - | chr4.1:7046623-7046642 | None:intergenic | 35.0% |
| !! | AGGGAGTATTTCAACAACAA+CGG | + | chr4.1:7045954-7045973 | MS.gene70106:CDS | 35.0% |
| !! | ATTCTGAAGCAGATGTTGAA+AGG | + | chr4.1:7047562-7047581 | MS.gene70106:CDS | 35.0% |
| !! | GGTTGTTAAGAGTTTGTTGT+GGG | - | chr4.1:7045745-7045764 | None:intergenic | 35.0% |
| !! | TGGTTGTTAAGAGTTTGTTG+TGG | - | chr4.1:7045746-7045765 | None:intergenic | 35.0% |
| !! | TTCTGAAGCAGATGTTGAAA+GGG | + | chr4.1:7047563-7047582 | MS.gene70106:CDS | 35.0% |
| !!! | CAACTCATTTTGAAGTGGAA+GGG | + | chr4.1:7046519-7046538 | MS.gene70106:intron | 35.0% |
| !!! | CGAAACGGTTAGTTTTGTTT+GGG | - | chr4.1:7045695-7045714 | None:intergenic | 35.0% |
| AACAAAGAGAGAAGACCACA+TGG | - | chr4.1:7045667-7045686 | None:intergenic | 40.0% | |
| AGTTCAACGGGATATTAGGT+TGG | + | chr4.1:7046025-7046044 | MS.gene70106:CDS | 40.0% | |
| AGTTGCGACTCTATTGTGAA+AGG | + | chr4.1:7046803-7046822 | MS.gene70106:intron | 40.0% | |
| CAAATAGTAACACCCTGAAG+TGG | - | chr4.1:7046101-7046120 | None:intergenic | 40.0% | |
| CAACTTGTGTCCAGTGAAAA+TGG | + | chr4.1:7047285-7047304 | MS.gene70106:CDS | 40.0% | |
| CCAGACAAATTTGGTCTCTA+AGG | - | chr4.1:7047015-7047034 | None:intergenic | 40.0% | |
| CCTTAGAGACCAAATTTGTC+TGG | + | chr4.1:7047012-7047031 | MS.gene70106:intron | 40.0% | |
| CCTTTCAGGATCAGAACTAA+GGG | - | chr4.1:7047122-7047141 | None:intergenic | 40.0% | |
| CTTTCAGGATCAGAACTAAG+GGG | - | chr4.1:7047121-7047140 | None:intergenic | 40.0% | |
| GAACACACACCAGACAAATT+TGG | - | chr4.1:7047024-7047043 | None:intergenic | 40.0% | |
| GGTGAGTGATTTAGAGAGTT+TGG | + | chr4.1:7047335-7047354 | MS.gene70106:CDS | 40.0% | |
| GTCAGACATTGTAAAAGGAG+GGG | - | chr4.1:7047066-7047085 | None:intergenic | 40.0% | |
| GTGATGACAAAGAAGTTGTG+AGG | + | chr4.1:7045934-7045953 | MS.gene70106:CDS | 40.0% | |
| GTTCAACGGGATATTAGGTT+GGG | + | chr4.1:7046026-7046045 | MS.gene70106:CDS | 40.0% | |
| GTTGCGACTCTATTGTGAAA+GGG | + | chr4.1:7046804-7046823 | MS.gene70106:intron | 40.0% | |
| TAGTGATATATCAGCTGCCA+TGG | + | chr4.1:7046187-7046206 | MS.gene70106:CDS | 40.0% | |
| TATGATGCACTAAAGAGGGT+TGG | + | chr4.1:7047495-7047514 | MS.gene70106:CDS | 40.0% | |
| TTCAGAATGAAGATATGCCC+TGG | - | chr4.1:7047550-7047569 | None:intergenic | 40.0% | |
| ! | ACTATTTGTGATGCTGGTTG+TGG | + | chr4.1:7046113-7046132 | MS.gene70106:CDS | 40.0% |
| !! | GCTTGCAACTCATTTTGAAG+TGG | + | chr4.1:7046514-7046533 | MS.gene70106:intron | 40.0% |
| !! | GGGAGTATTTCAACAACAAC+GGG | + | chr4.1:7045955-7045974 | MS.gene70106:CDS | 40.0% |
| !! | GGTGTTACTATTTGTGATGC+TGG | + | chr4.1:7046107-7046126 | MS.gene70106:CDS | 40.0% |
| !! | TGTTAAGAGTTTGTTGTGGG+TGG | - | chr4.1:7045742-7045761 | None:intergenic | 40.0% |
| !!! | CGGTTAGTTTTGTTTGGGTT+TGG | - | chr4.1:7045690-7045709 | None:intergenic | 40.0% |
| !!! | GCAACTCATTTTGAAGTGGA+AGG | + | chr4.1:7046518-7046537 | MS.gene70106:intron | 40.0% |
| !!! | GCGAAACGGTTAGTTTTGTT+TGG | - | chr4.1:7045696-7045715 | None:intergenic | 40.0% |
| AAAGATGAAGGGCCACTTCA+GGG | + | chr4.1:7046086-7046105 | MS.gene70106:CDS | 45.0% | |
| ACCCTCAGAGTAAAGCAGAT+GGG | + | chr4.1:7047403-7047422 | MS.gene70106:CDS | 45.0% | |
| AGGAACAGCCTCAATAAGCT+TGG | - | chr4.1:7047652-7047671 | None:intergenic | 45.0% | |
| AGGGAGAGAATGTAGCGAAA+CGG | - | chr4.1:7045710-7045729 | None:intergenic | 45.0% | |
| ATCCCATCTGCTTTACTCTG+AGG | - | chr4.1:7047408-7047427 | None:intergenic | 45.0% | |
| GATTGCTCACCTTGCTTCTT+TGG | + | chr4.1:7047428-7047447 | MS.gene70106:CDS | 45.0% | |
| GCCTTTCAGGATCAGAACTA+AGG | - | chr4.1:7047123-7047142 | None:intergenic | 45.0% | |
| GGAAGATTATGGAGTCAGAG+AGG | + | chr4.1:7046717-7046736 | MS.gene70106:intron | 45.0% | |
| GGGTGGACGATAAAGAAGAA+AGG | + | chr4.1:7047600-7047619 | MS.gene70106:CDS | 45.0% | |
| GGTGTGTGTTCTGTCAACTA+AGG | + | chr4.1:7047033-7047052 | MS.gene70106:intron | 45.0% | |
| TAAGGTTTCACCCTGGTCAT+GGG | - | chr4.1:7046997-7047016 | None:intergenic | 45.0% | |
| TACCCTCAGAGTAAAGCAGA+TGG | + | chr4.1:7047402-7047421 | MS.gene70106:CDS | 45.0% | |
| TAGGCACGAATGGCATGTTA+GGG | - | chr4.1:7046912-7046931 | None:intergenic | 45.0% | |
| TCCCATCTGCTTTACTCTGA+GGG | - | chr4.1:7047407-7047426 | None:intergenic | 45.0% | |
| TGGTTCTCTTTCGATTCCGT+TGG | + | chr4.1:7046139-7046158 | MS.gene70106:CDS | 45.0% | |
| TTTCTCAGCTTCAGCAACCA+TGG | - | chr4.1:7046207-7046226 | None:intergenic | 45.0% | |
| ! | ACAACAACGGGTTTCAACGA+TGG | + | chr4.1:7045967-7045986 | MS.gene70106:CDS | 45.0% |
| ! | AGGTGACACTCCATTTTCAC+TGG | - | chr4.1:7047298-7047317 | None:intergenic | 45.0% |
| ! | GCTTTTCTGCCAAAGAAGCA+AGG | - | chr4.1:7047440-7047459 | None:intergenic | 45.0% |
| !! | CCCTTAGTTCTGATCCTGAA+AGG | + | chr4.1:7047119-7047138 | MS.gene70106:intron | 45.0% |
| !! | GGATGGATTGTACGATACAG+TGG | + | chr4.1:7047356-7047375 | MS.gene70106:CDS | 45.0% |
| !! | TAAGAGTTTGTTGTGGGTGG+CGG | - | chr4.1:7045739-7045758 | None:intergenic | 45.0% |
| !!! | AGTGTTTTGGTAGGCACGAA+TGG | - | chr4.1:7046922-7046941 | None:intergenic | 45.0% |
| AAGATATGCCCTGGTTGCCT+TGG | - | chr4.1:7047541-7047560 | None:intergenic | 50.0% | |
| ACAAACAACGGCACCTTCCT+TGG | - | chr4.1:7046165-7046184 | None:intergenic | 50.0% | |
| ACAACAATCGCGGTCGTAAG+CGG | + | chr4.1:7045828-7045847 | MS.gene70106:CDS | 50.0% | |
| ACCACAAACTTTGGCATCGC+AGG | - | chr4.1:7047318-7047337 | None:intergenic | 50.0% | |
| ACCTGCGATGCCAAAGTTTG+TGG | + | chr4.1:7047314-7047333 | MS.gene70106:CDS | 50.0% | |
| ACTTCTCTCCCTTTCAGACC+CGG | + | chr4.1:7045875-7045894 | MS.gene70106:CDS | 50.0% | |
| CATAGACGGCACAACAATCG+CGG | + | chr4.1:7045818-7045837 | MS.gene70106:CDS | 50.0% | |
| CTAAGGTTTCACCCTGGTCA+TGG | - | chr4.1:7046998-7047017 | None:intergenic | 50.0% | |
| GAAAGATGAAGGGCCACTTC+AGG | + | chr4.1:7046085-7046104 | MS.gene70106:CDS | 50.0% | |
| GGTTGCTGAAGCTGAGAAAC+AGG | + | chr4.1:7046208-7046227 | MS.gene70106:CDS | 50.0% | |
| GTAGGCACGAATGGCATGTT+AGG | - | chr4.1:7046913-7046932 | None:intergenic | 50.0% | |
| GTCTGAAAGGGAGAGAAGTG+CGG | - | chr4.1:7045874-7045893 | None:intergenic | 50.0% | |
| TCGTCTTTCCGGGTCTGAAA+GGG | - | chr4.1:7045886-7045905 | None:intergenic | 50.0% | |
| TCTTTCGATTCCGTTGGCCA+AGG | + | chr4.1:7046145-7046164 | MS.gene70106:CDS | 50.0% | |
| TGGCGTTCTCATCATCCATG+TGG | + | chr4.1:7045649-7045668 | MS.gene70106:CDS | 50.0% | |
| ! | TGTGATGCTGGTTGTGGTAC+TGG | + | chr4.1:7046119-7046138 | MS.gene70106:CDS | 50.0% |
| !! | AAGAGTTTGTTGTGGGTGGC+GGG | - | chr4.1:7045738-7045757 | None:intergenic | 50.0% |
| !! | TGGTCTCTAAGGTTTCACCC+TGG | - | chr4.1:7047004-7047023 | None:intergenic | 50.0% |
| AAATACCCGGATCTTGCGCC+GGG | - | chr4.1:7047153-7047172 | None:intergenic | 55.0% | |
| AGGGTTGGAGAGTTGTTCCC+TGG | + | chr4.1:7047510-7047529 | MS.gene70106:CDS | 55.0% | |
| CGCGATTGTTGTGCCGTCTA+TGG | - | chr4.1:7045820-7045839 | None:intergenic | 55.0% | |
| CTGTTGCGGTTGAGAGTGGA+GGG | - | chr4.1:7045779-7045798 | None:intergenic | 55.0% | |
| GAAATACCCGGATCTTGCGC+CGG | - | chr4.1:7047154-7047173 | None:intergenic | 55.0% | |
| GGGTTGGAGAGTTGTTCCCT+GGG | + | chr4.1:7047511-7047530 | MS.gene70106:CDS | 55.0% | |
| GTCGTCTTTCCGGGTCTGAA+AGG | - | chr4.1:7045887-7045906 | None:intergenic | 55.0% | |
| TATGCCCTGGTTGCCTTGGA+AGG | - | chr4.1:7047537-7047556 | None:intergenic | 55.0% | |
| TCCTGAAAGGCGAAAGAGCC+CGG | + | chr4.1:7047132-7047151 | MS.gene70106:intron | 55.0% | |
| TCGATTCCGTTGGCCAAGGA+AGG | + | chr4.1:7046149-7046168 | MS.gene70106:CDS | 55.0% | |
| TGTTCGCGTCGTCGTCTTTC+CGG | - | chr4.1:7045897-7045916 | None:intergenic | 55.0% | |
| ! | AAAGGGAGAGAAGTGCGGTG+AGG | - | chr4.1:7045869-7045888 | None:intergenic | 55.0% |
| !! | AAAGGGCGTTGCGCAAGGTT+GGG | + | chr4.1:7047580-7047599 | MS.gene70106:CDS | 55.0% |
| !! | TGTTGAAAGGGCGTTGCGCA+AGG | + | chr4.1:7047575-7047594 | MS.gene70106:CDS | 55.0% |
| AAAGAGCCCGGCGCAAGATC+CGG | + | chr4.1:7047144-7047163 | MS.gene70106:intron | 60.0% | |
| AAGACGACGACGCGAACAGG+CGG | + | chr4.1:7045899-7045918 | MS.gene70106:CDS | 60.0% | |
| ACAATCGCGGTCGTAAGCGG+TGG | + | chr4.1:7045831-7045850 | MS.gene70106:CDS | 60.0% | |
| ACGGCACCTTCCTTGGCCAA+CGG | - | chr4.1:7046158-7046177 | None:intergenic | 60.0% | |
| GAACAGGCGGAGGAAGTAGG+CGG | + | chr4.1:7045912-7045931 | MS.gene70106:CDS | 60.0% | |
| GACGTTACCGGCGCCATAGA+CGG | + | chr4.1:7045804-7045823 | MS.gene70106:CDS | 60.0% | |
| GAGTGGAGGGATGGCGAATG+TGG | - | chr4.1:7045766-7045785 | None:intergenic | 60.0% | |
| GCTGTTGCGGTTGAGAGTGG+AGG | - | chr4.1:7045780-7045799 | None:intergenic | 60.0% | |
| GGAAAGACGACGACGCGAAC+AGG | + | chr4.1:7045896-7045915 | MS.gene70106:CDS | 60.0% | |
| GTTCGCGTCGTCGTCTTTCC+GGG | - | chr4.1:7045896-7045915 | None:intergenic | 60.0% | |
| GTTGTTCCCTGGGCCTTCCA+AGG | + | chr4.1:7047521-7047540 | MS.gene70106:CDS | 60.0% | |
| TGCGGTTGAGAGTGGAGGGA+TGG | - | chr4.1:7045775-7045794 | None:intergenic | 60.0% | |
| TGGGCCTTCCAAGGCAACCA+GGG | + | chr4.1:7047530-7047549 | MS.gene70106:CDS | 60.0% | |
| TGGTTGCCTTGGAAGGCCCA+GGG | - | chr4.1:7047530-7047549 | None:intergenic | 60.0% | |
| TGTTGTGCCGTCTATGGCGC+CGG | - | chr4.1:7045814-7045833 | None:intergenic | 60.0% | |
| !! | GAAAGGGCGTTGCGCAAGGT+TGG | + | chr4.1:7047579-7047598 | MS.gene70106:CDS | 60.0% |
| !! | GTCTATGGCGCCGGTAACGT+CGG | - | chr4.1:7045805-7045824 | None:intergenic | 60.0% |
| !! | TTTGTTGTGGGTGGCGGGAG+AGG | - | chr4.1:7045733-7045752 | None:intergenic | 60.0% |
| AAGAGCCCGGCGCAAGATCC+GGG | + | chr4.1:7047145-7047164 | MS.gene70106:intron | 65.0% | |
| CGCGAACAGGCGGAGGAAGT+AGG | + | chr4.1:7045909-7045928 | MS.gene70106:CDS | 65.0% | |
| CTGGGCCTTCCAAGGCAACC+AGG | + | chr4.1:7047529-7047548 | MS.gene70106:CDS | 65.0% | |
| CTGGTTGCCTTGGAAGGCCC+AGG | - | chr4.1:7047531-7047550 | None:intergenic | 65.0% | |
| GCAACAGCCGCCGACGTTAC+CGG | + | chr4.1:7045792-7045811 | MS.gene70106:CDS | 65.0% | |
| GCCGGGCTCTTTCGCCTTTC+AGG | - | chr4.1:7047136-7047155 | None:intergenic | 65.0% | |
| GCGGCTGTTGCGGTTGAGAG+TGG | - | chr4.1:7045783-7045802 | None:intergenic | 65.0% | |
| GGTAACGTCGGCGGCTGTTG+CGG | - | chr4.1:7045793-7045812 | None:intergenic | 65.0% | |
| GTAAGCGGTGGCTTCGTCGC+TGG | + | chr4.1:7045843-7045862 | MS.gene70106:CDS | 65.0% | |
| !! | TATGGCGCCGGTAACGTCGG+CGG | - | chr4.1:7045802-7045821 | None:intergenic | 65.0% |
| !! | TTGTGGGTGGCGGGAGAGGA+GGG | - | chr4.1:7045729-7045748 | None:intergenic | 65.0% |
| ACGACGACGCGAACAGGCGG+AGG | + | chr4.1:7045902-7045921 | MS.gene70106:CDS | 70.0% | |
| ! | GGGCGTTGCGCAAGGTTGGG+TGG | + | chr4.1:7047583-7047602 | MS.gene70106:CDS | 70.0% |
| !! | GTTGTGGGTGGCGGGAGAGG+AGG | - | chr4.1:7045730-7045749 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 7045648 | 7047677 | 7045648 | ID=MS.gene70106 |
| chr4.1 | mRNA | 7045648 | 7047677 | 7045648 | ID=MS.gene70106.t1;Parent=MS.gene70106 |
| chr4.1 | exon | 7045648 | 7046229 | 7045648 | ID=MS.gene70106.t1.exon1;Parent=MS.gene70106.t1 |
| chr4.1 | CDS | 7045648 | 7046229 | 7045648 | ID=cds.MS.gene70106.t1;Parent=MS.gene70106.t1 |
| chr4.1 | exon | 7047276 | 7047677 | 7047276 | ID=MS.gene70106.t1.exon2;Parent=MS.gene70106.t1 |
| chr4.1 | CDS | 7047276 | 7047677 | 7047276 | ID=cds.MS.gene70106.t1;Parent=MS.gene70106.t1 |
| Gene Sequence |
| Protein sequence |
