Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93136.t1 | GAU18076.1 | 84.5 | 129 | 18 | 2 | 39 | 165 | 39 | 167 | 9.10E-52 | 214.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93136.t1 | Q8LD49 | 74.0 | 96 | 25 | 0 | 69 | 164 | 70 | 165 | 2.4e-37 | 157.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93136.t1 | A0A2Z6LP64 | 84.5 | 129 | 18 | 2 | 39 | 165 | 39 | 167 | 6.6e-52 | 214.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene93136 | 0.863902 | 1.79E-64 | -1.69E-46 |
| MS.gene049173 | MS.gene93136 | 0.806743 | 7.09E-50 | -1.69E-46 |
| MS.gene049217 | MS.gene93136 | 0.818989 | 1.47E-52 | -1.69E-46 |
| MS.gene049222 | MS.gene93136 | 0.882636 | 8.82E-71 | -1.69E-46 |
| MS.gene049232 | MS.gene93136 | 0.850172 | 2.02E-60 | -1.69E-46 |
| MS.gene049285 | MS.gene93136 | 0.901241 | 3.27E-78 | -1.69E-46 |
| MS.gene049320 | MS.gene93136 | 0.880436 | 5.50E-70 | -1.69E-46 |
| MS.gene049427 | MS.gene93136 | 0.800037 | 1.74E-48 | -1.69E-46 |
| MS.gene049609 | MS.gene93136 | 0.846848 | 1.68E-59 | -1.69E-46 |
| MS.gene049633 | MS.gene93136 | 0.8453 | 4.43E-59 | -1.69E-46 |
| MS.gene049805 | MS.gene93136 | 0.829307 | 5.54E-55 | -1.69E-46 |
| MS.gene05010 | MS.gene93136 | 0.855121 | 7.80E-62 | -1.69E-46 |
| MS.gene050163 | MS.gene93136 | 0.850203 | 1.98E-60 | -1.69E-46 |
| MS.gene050165 | MS.gene93136 | 0.847208 | 1.34E-59 | -1.69E-46 |
| MS.gene050170 | MS.gene93136 | 0.803251 | 3.81E-49 | -1.69E-46 |
| MS.gene050216 | MS.gene93136 | 0.801284 | 9.68E-49 | -1.69E-46 |
| MS.gene050323 | MS.gene93136 | 0.84065 | 7.65E-58 | -1.69E-46 |
| MS.gene050333 | MS.gene93136 | 0.869921 | 2.16E-66 | -1.69E-46 |
| MS.gene050496 | MS.gene93136 | 0.805963 | 1.04E-49 | -1.69E-46 |
| MS.gene050504 | MS.gene93136 | 0.869373 | 3.25E-66 | -1.69E-46 |
| MS.gene050518 | MS.gene93136 | 0.894881 | 1.62E-75 | -1.69E-46 |
| MS.gene050538 | MS.gene93136 | 0.830595 | 2.69E-55 | -1.69E-46 |
| MS.gene050577 | MS.gene93136 | 0.844092 | 9.36E-59 | -1.69E-46 |
| MS.gene050593 | MS.gene93136 | 0.833158 | 6.26E-56 | -1.69E-46 |
| MS.gene050612 | MS.gene93136 | 0.875943 | 2.07E-68 | -1.69E-46 |
| MS.gene050675 | MS.gene93136 | 0.838374 | 2.99E-57 | -1.69E-46 |
| MS.gene050699 | MS.gene93136 | 0.854654 | 1.07E-61 | -1.69E-46 |
| MS.gene050747 | MS.gene93136 | 0.875752 | 2.40E-68 | -1.69E-46 |
| MS.gene050772 | MS.gene93136 | 0.879708 | 9.99E-70 | -1.69E-46 |
| MS.gene05080 | MS.gene93136 | 0.853078 | 3.03E-61 | -1.69E-46 |
| MS.gene050868 | MS.gene93136 | 0.838762 | 2.37E-57 | -1.69E-46 |
| MS.gene050871 | MS.gene93136 | 0.834094 | 3.66E-56 | -1.69E-46 |
| MS.gene050904 | MS.gene93136 | 0.813356 | 2.67E-51 | -1.69E-46 |
| MS.gene050950 | MS.gene93136 | 0.883255 | 5.24E-71 | -1.69E-46 |
| MS.gene050986 | MS.gene93136 | 0.846626 | 1.93E-59 | -1.69E-46 |
| MS.gene05100 | MS.gene93136 | 0.821663 | 3.58E-53 | -1.69E-46 |
| MS.gene051228 | MS.gene93136 | 0.807817 | 4.20E-50 | -1.69E-46 |
| MS.gene051317 | MS.gene93136 | 0.835062 | 2.09E-56 | -1.69E-46 |
| MS.gene051387 | MS.gene93136 | 0.816727 | 4.76E-52 | -1.69E-46 |
| MS.gene051551 | MS.gene93136 | 0.838321 | 3.08E-57 | -1.69E-46 |
| MS.gene051666 | MS.gene93136 | 0.824495 | 7.83E-54 | -1.69E-46 |
| MS.gene051694 | MS.gene93136 | 0.805945 | 1.04E-49 | -1.69E-46 |
| MS.gene051810 | MS.gene93136 | 0.842091 | 3.20E-58 | -1.69E-46 |
| MS.gene051858 | MS.gene93136 | 0.806916 | 6.52E-50 | -1.69E-46 |
| MS.gene051949 | MS.gene93136 | 0.814187 | 1.75E-51 | -1.69E-46 |
| MS.gene052271 | MS.gene93136 | 0.823616 | 1.26E-53 | -1.69E-46 |
| MS.gene052379 | MS.gene93136 | 0.827051 | 1.94E-54 | -1.69E-46 |
| MS.gene052482 | MS.gene93136 | 0.850441 | 1.69E-60 | -1.69E-46 |
| MS.gene052486 | MS.gene93136 | 0.849526 | 3.06E-60 | -1.69E-46 |
| MS.gene052506 | MS.gene93136 | 0.815071 | 1.12E-51 | -1.69E-46 |
| MS.gene052615 | MS.gene93136 | 0.824956 | 6.09E-54 | -1.69E-46 |
| MS.gene052822 | MS.gene93136 | 0.831631 | 1.50E-55 | -1.69E-46 |
| MS.gene052870 | MS.gene93136 | 0.820531 | 6.53E-53 | -1.69E-46 |
| MS.gene052872 | MS.gene93136 | 0.818986 | 1.47E-52 | -1.69E-46 |
| MS.gene052916 | MS.gene93136 | 0.821302 | 4.34E-53 | -1.69E-46 |
| MS.gene052966 | MS.gene93136 | 0.814667 | 1.37E-51 | -1.69E-46 |
| MS.gene053104 | MS.gene93136 | 0.853071 | 3.04E-61 | -1.69E-46 |
| MS.gene053107 | MS.gene93136 | 0.819379 | 1.20E-52 | -1.69E-46 |
| MS.gene053203 | MS.gene93136 | 0.829978 | 3.80E-55 | -1.69E-46 |
| MS.gene053207 | MS.gene93136 | 0.820802 | 5.66E-53 | -1.69E-46 |
| MS.gene053213 | MS.gene93136 | 0.886245 | 4.05E-72 | -1.69E-46 |
| MS.gene053286 | MS.gene93136 | 0.885864 | 5.63E-72 | -1.69E-46 |
| MS.gene053322 | MS.gene93136 | 0.829213 | 5.84E-55 | -1.69E-46 |
| MS.gene053436 | MS.gene93136 | 0.816292 | 5.96E-52 | -1.69E-46 |
| MS.gene053479 | MS.gene93136 | 0.839315 | 1.70E-57 | -1.69E-46 |
| MS.gene053574 | MS.gene93136 | 0.876692 | 1.14E-68 | -1.69E-46 |
| MS.gene053579 | MS.gene93136 | 0.803382 | 3.58E-49 | -1.69E-46 |
| MS.gene053626 | MS.gene93136 | 0.80291 | 4.48E-49 | -1.69E-46 |
| MS.gene053824 | MS.gene93136 | 0.831763 | 1.39E-55 | -1.69E-46 |
| MS.gene053916 | MS.gene93136 | 0.811499 | 6.79E-51 | -1.69E-46 |
| MS.gene054374 | MS.gene93136 | 0.874867 | 4.83E-68 | -1.69E-46 |
| MS.gene054408 | MS.gene93136 | 0.863193 | 2.97E-64 | -1.69E-46 |
| MS.gene054595 | MS.gene93136 | 0.834432 | 3.01E-56 | -1.69E-46 |
| MS.gene054600 | MS.gene93136 | 0.843735 | 1.17E-58 | -1.69E-46 |
| MS.gene054642 | MS.gene93136 | 0.890653 | 8.11E-74 | -1.69E-46 |
| MS.gene05470 | MS.gene93136 | 0.802813 | 4.69E-49 | -1.69E-46 |
| MS.gene054954 | MS.gene93136 | 0.87713 | 8.04E-69 | -1.69E-46 |
| MS.gene05505 | MS.gene93136 | 0.811733 | 6.04E-51 | -1.69E-46 |
| MS.gene055206 | MS.gene93136 | 0.823995 | 1.03E-53 | -1.69E-46 |
| MS.gene055212 | MS.gene93136 | 0.814294 | 1.66E-51 | -1.69E-46 |
| MS.gene055224 | MS.gene93136 | 0.845171 | 4.80E-59 | -1.69E-46 |
| MS.gene055362 | MS.gene93136 | 0.863126 | 3.11E-64 | -1.69E-46 |
| MS.gene055502 | MS.gene93136 | 0.886561 | 3.07E-72 | -1.69E-46 |
| MS.gene055577 | MS.gene93136 | 0.844625 | 6.73E-59 | -1.69E-46 |
| MS.gene055634 | MS.gene93136 | 0.801171 | 1.02E-48 | -1.69E-46 |
| MS.gene055636 | MS.gene93136 | 0.826147 | 3.18E-54 | -1.69E-46 |
| MS.gene055638 | MS.gene93136 | 0.833408 | 5.43E-56 | -1.69E-46 |
| MS.gene055647 | MS.gene93136 | 0.824005 | 1.02E-53 | -1.69E-46 |
| MS.gene055722 | MS.gene93136 | 0.828409 | 9.14E-55 | -1.69E-46 |
| MS.gene055748 | MS.gene93136 | 0.86117 | 1.24E-63 | -1.69E-46 |
| MS.gene055750 | MS.gene93136 | 0.857922 | 1.17E-62 | -1.69E-46 |
| MS.gene055751 | MS.gene93136 | 0.860625 | 1.81E-63 | -1.69E-46 |
| MS.gene055776 | MS.gene93136 | 0.802678 | 5.01E-49 | -1.69E-46 |
| MS.gene05589 | MS.gene93136 | 0.810808 | 9.59E-51 | -1.69E-46 |
| MS.gene05592 | MS.gene93136 | 0.840357 | 9.13E-58 | -1.69E-46 |
| MS.gene055941 | MS.gene93136 | 0.842638 | 2.29E-58 | -1.69E-46 |
| MS.gene055956 | MS.gene93136 | -0.802429 | 5.63E-49 | -1.69E-46 |
| MS.gene056083 | MS.gene93136 | 0.801367 | 9.31E-49 | -1.69E-46 |
| MS.gene056374 | MS.gene93136 | 0.835101 | 2.04E-56 | -1.69E-46 |
| MS.gene056446 | MS.gene93136 | 0.824899 | 6.29E-54 | -1.69E-46 |
| MS.gene056504 | MS.gene93136 | 0.849149 | 3.89E-60 | -1.69E-46 |
| MS.gene056510 | MS.gene93136 | 0.875171 | 3.80E-68 | -1.69E-46 |
| MS.gene056549 | MS.gene93136 | 0.807404 | 5.14E-50 | -1.69E-46 |
| MS.gene056657 | MS.gene93136 | 0.88707 | 1.97E-72 | -1.69E-46 |
| MS.gene056692 | MS.gene93136 | 0.85898 | 5.67E-63 | -1.69E-46 |
| MS.gene056897 | MS.gene93136 | 0.809172 | 2.16E-50 | -1.69E-46 |
| MS.gene056898 | MS.gene93136 | 0.824822 | 6.55E-54 | -1.69E-46 |
| MS.gene057011 | MS.gene93136 | 0.829227 | 5.79E-55 | -1.69E-46 |
| MS.gene057076 | MS.gene93136 | 0.813967 | 1.96E-51 | -1.69E-46 |
| MS.gene057129 | MS.gene93136 | 0.808801 | 2.59E-50 | -1.69E-46 |
| MS.gene057331 | MS.gene93136 | 0.860871 | 1.53E-63 | -1.69E-46 |
| MS.gene057416 | MS.gene93136 | 0.872325 | 3.47E-67 | -1.69E-46 |
| MS.gene057658 | MS.gene93136 | 0.803189 | 3.93E-49 | -1.69E-46 |
| MS.gene057831 | MS.gene93136 | 0.835376 | 1.74E-56 | -1.69E-46 |
| MS.gene05787 | MS.gene93136 | 0.818781 | 1.64E-52 | -1.69E-46 |
| MS.gene058019 | MS.gene93136 | 0.817071 | 3.99E-52 | -1.69E-46 |
| MS.gene058130 | MS.gene93136 | 0.829269 | 5.66E-55 | -1.69E-46 |
| MS.gene058323 | MS.gene93136 | 0.834589 | 2.75E-56 | -1.69E-46 |
| MS.gene058338 | MS.gene93136 | 0.825314 | 5.01E-54 | -1.69E-46 |
| MS.gene05837 | MS.gene93136 | 0.876236 | 1.64E-68 | -1.69E-46 |
| MS.gene058419 | MS.gene93136 | 0.892553 | 1.43E-74 | -1.69E-46 |
| MS.gene058544 | MS.gene93136 | 0.868728 | 5.26E-66 | -1.69E-46 |
| MS.gene058723 | MS.gene93136 | 0.807615 | 4.63E-50 | -1.69E-46 |
| MS.gene058773 | MS.gene93136 | 0.87812 | 3.63E-69 | -1.69E-46 |
| MS.gene058838 | MS.gene93136 | 0.806595 | 7.62E-50 | -1.69E-46 |
| MS.gene059022 | MS.gene93136 | 0.856754 | 2.60E-62 | -1.69E-46 |
| MS.gene059023 | MS.gene93136 | 0.859286 | 4.59E-63 | -1.69E-46 |
| MS.gene059029 | MS.gene93136 | 0.857206 | 1.91E-62 | -1.69E-46 |
| MS.gene059079 | MS.gene93136 | 0.816614 | 5.05E-52 | -1.69E-46 |
| MS.gene05913 | MS.gene93136 | 0.827006 | 1.99E-54 | -1.69E-46 |
| MS.gene059181 | MS.gene93136 | 0.809882 | 1.52E-50 | -1.69E-46 |
| MS.gene05934 | MS.gene93136 | 0.834224 | 3.39E-56 | -1.69E-46 |
| MS.gene059536 | MS.gene93136 | 0.813287 | 2.76E-51 | -1.69E-46 |
| MS.gene059667 | MS.gene93136 | 0.819291 | 1.25E-52 | -1.69E-46 |
| MS.gene059677 | MS.gene93136 | 0.871445 | 6.80E-67 | -1.69E-46 |
| MS.gene059718 | MS.gene93136 | 0.864162 | 1.48E-64 | -1.69E-46 |
| MS.gene059756 | MS.gene93136 | 0.840787 | 7.04E-58 | -1.69E-46 |
| MS.gene059801 | MS.gene93136 | 0.805084 | 1.58E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene93136 | 0.847258 | 1.30E-59 | -1.69E-46 |
| MS.gene059902 | MS.gene93136 | 0.808041 | 3.76E-50 | -1.69E-46 |
| MS.gene059960 | MS.gene93136 | 0.835535 | 1.59E-56 | -1.69E-46 |
| MS.gene060703 | MS.gene93136 | 0.831351 | 1.75E-55 | -1.69E-46 |
| MS.gene060762 | MS.gene93136 | 0.857035 | 2.15E-62 | -1.69E-46 |
| MS.gene06077 | MS.gene93136 | 0.861995 | 6.93E-64 | -1.69E-46 |
| MS.gene060804 | MS.gene93136 | 0.812863 | 3.42E-51 | -1.69E-46 |
| MS.gene060835 | MS.gene93136 | 0.800609 | 1.33E-48 | -1.69E-46 |
| MS.gene06092 | MS.gene93136 | 0.872475 | 3.09E-67 | -1.69E-46 |
| MS.gene060982 | MS.gene93136 | 0.849795 | 2.57E-60 | -1.69E-46 |
| MS.gene061134 | MS.gene93136 | 0.814716 | 1.34E-51 | -1.69E-46 |
| MS.gene061150 | MS.gene93136 | 0.864139 | 1.51E-64 | -1.69E-46 |
| MS.gene061200 | MS.gene93136 | 0.82888 | 7.03E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene60687 | MS.gene93136 | PPI |
| MS.gene93136 | MS.gene006160 | PPI |
| MS.gene93136 | MS.gene59222 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93136.t1 | MTR_1g114290 | 92.216 | 167 | 9 | 2 | 1 | 165 | 1 | 165 | 8.75e-101 | 294 |
| MS.gene93136.t1 | MTR_1g114190 | 50.588 | 170 | 29 | 4 | 204 | 319 | 378 | 546 | 4.23e-39 | 147 |
| MS.gene93136.t1 | MTR_3g089065 | 42.169 | 83 | 48 | 0 | 70 | 152 | 70 | 152 | 3.32e-22 | 92.0 |
| MS.gene93136.t1 | MTR_2g079420 | 36.752 | 117 | 73 | 1 | 37 | 152 | 36 | 152 | 9.13e-22 | 90.9 |
| MS.gene93136.t1 | MTR_4g085880 | 45.122 | 82 | 45 | 0 | 71 | 152 | 66 | 147 | 3.40e-21 | 89.0 |
| MS.gene93136.t1 | MTR_1g098660 | 40.909 | 88 | 50 | 1 | 76 | 163 | 68 | 153 | 6.75e-21 | 88.2 |
| MS.gene93136.t1 | MTR_8g059015 | 39.759 | 83 | 50 | 0 | 70 | 152 | 73 | 155 | 3.29e-19 | 84.0 |
| MS.gene93136.t1 | MTR_7g009070 | 38.095 | 84 | 48 | 2 | 85 | 165 | 47 | 129 | 1.45e-15 | 72.8 |
| MS.gene93136.t1 | MTR_2g079400 | 37.209 | 86 | 54 | 0 | 67 | 152 | 31 | 116 | 2.42e-14 | 69.3 |
| MS.gene93136.t1 | MTR_5g084930 | 31.973 | 147 | 89 | 3 | 64 | 202 | 24 | 167 | 1.68e-13 | 71.2 |
| MS.gene93136.t1 | MTR_5g084930 | 32.292 | 96 | 61 | 1 | 71 | 162 | 161 | 256 | 3.08e-11 | 64.3 |
| MS.gene93136.t1 | MTR_2g079340 | 38.750 | 80 | 49 | 0 | 73 | 152 | 39 | 118 | 2.97e-13 | 67.0 |
| MS.gene93136.t1 | MTR_1g023140 | 37.113 | 97 | 51 | 4 | 77 | 164 | 16 | 111 | 4.40e-13 | 65.5 |
| MS.gene93136.t1 | MTR_2g079380 | 37.931 | 87 | 54 | 0 | 66 | 152 | 14 | 100 | 1.78e-12 | 66.6 |
| MS.gene93136.t1 | MTR_3g112410 | 37.209 | 86 | 47 | 3 | 85 | 164 | 27 | 111 | 4.04e-12 | 62.8 |
| MS.gene93136.t1 | MTR_1g087520 | 39.535 | 86 | 46 | 2 | 78 | 157 | 157 | 242 | 4.20e-12 | 66.6 |
| MS.gene93136.t1 | MTR_1g037680 | 35.294 | 85 | 53 | 1 | 80 | 162 | 89 | 173 | 4.55e-12 | 64.3 |
| MS.gene93136.t1 | MTR_2g021750 | 34.286 | 105 | 66 | 1 | 64 | 165 | 24 | 128 | 2.52e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93136.t1 | AT1G50320 | 54.070 | 172 | 64 | 5 | 1 | 164 | 1 | 165 | 7.07e-53 | 172 |
| MS.gene93136.t1 | AT1G76760 | 44.186 | 86 | 46 | 1 | 78 | 163 | 73 | 156 | 3.17e-22 | 92.0 |
| MS.gene93136.t1 | AT1G03680 | 40.476 | 84 | 50 | 0 | 69 | 152 | 75 | 158 | 1.00e-19 | 85.5 |
| MS.gene93136.t1 | AT1G43560 | 43.529 | 85 | 46 | 1 | 78 | 162 | 68 | 150 | 1.14e-19 | 85.1 |
| MS.gene93136.t1 | AT3G15360 | 38.636 | 88 | 54 | 0 | 65 | 152 | 83 | 170 | 2.37e-19 | 84.7 |
| MS.gene93136.t1 | AT2G15570 | 41.463 | 82 | 48 | 0 | 71 | 152 | 70 | 151 | 7.50e-19 | 82.8 |
| MS.gene93136.t1 | AT2G15570 | 41.463 | 82 | 48 | 0 | 71 | 152 | 69 | 150 | 7.56e-19 | 82.8 |
| MS.gene93136.t1 | AT4G03520 | 37.349 | 83 | 52 | 0 | 70 | 152 | 82 | 164 | 1.38e-16 | 77.0 |
| MS.gene93136.t1 | AT5G08310 | 43.011 | 93 | 47 | 2 | 233 | 319 | 478 | 570 | 2.50e-16 | 80.1 |
| MS.gene93136.t1 | AT5G08310 | 43.011 | 93 | 47 | 2 | 233 | 319 | 478 | 570 | 2.50e-16 | 80.1 |
| MS.gene93136.t1 | AT1G04980 | 32.886 | 149 | 90 | 2 | 64 | 202 | 28 | 176 | 4.73e-15 | 75.9 |
| MS.gene93136.t1 | AT5G39950 | 37.037 | 81 | 47 | 2 | 82 | 159 | 43 | 122 | 3.88e-14 | 68.9 |
| MS.gene93136.t1 | AT2G32920 | 34.286 | 105 | 66 | 1 | 64 | 165 | 26 | 130 | 1.83e-13 | 71.2 |
| MS.gene93136.t1 | AT2G47470 | 33.594 | 128 | 72 | 4 | 36 | 157 | 116 | 236 | 2.06e-12 | 66.6 |
| MS.gene93136.t1 | AT2G47470 | 33.594 | 128 | 72 | 4 | 36 | 157 | 116 | 236 | 2.29e-12 | 67.4 |
| MS.gene93136.t1 | AT2G47470 | 33.594 | 128 | 72 | 4 | 36 | 157 | 116 | 236 | 2.71e-12 | 67.4 |
| MS.gene93136.t1 | AT2G47470 | 33.594 | 128 | 72 | 4 | 36 | 157 | 116 | 236 | 2.72e-12 | 67.0 |
| MS.gene93136.t1 | AT5G42980 | 38.235 | 68 | 41 | 1 | 84 | 151 | 25 | 91 | 6.63e-12 | 62.0 |
| MS.gene93136.t1 | AT3G06730 | 28.221 | 163 | 91 | 3 | 19 | 162 | 15 | 170 | 8.96e-12 | 63.5 |
| MS.gene93136.t1 | AT5G60640 | 38.947 | 95 | 53 | 3 | 73 | 163 | 108 | 201 | 2.62e-11 | 64.7 |
| MS.gene93136.t1 | AT5G60640 | 38.947 | 95 | 53 | 3 | 73 | 163 | 108 | 201 | 3.43e-11 | 64.3 |
| MS.gene93136.t1 | AT5G60640 | 38.947 | 95 | 53 | 3 | 73 | 163 | 108 | 201 | 3.48e-11 | 64.3 |
| MS.gene93136.t1 | AT1G19730 | 30.233 | 86 | 57 | 1 | 84 | 166 | 26 | 111 | 4.81e-11 | 59.7 |
| MS.gene93136.t1 | AT1G77510 | 36.634 | 101 | 53 | 5 | 73 | 163 | 34 | 133 | 5.91e-11 | 63.5 |
Find 77 sgRNAs with CRISPR-Local
Find 231 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCACTTATAACTTCATTTA+TGG | 0.054050 | 1.1:-80386330 | MS.gene93136:CDS |
| ATTGAAGAGTATAAAGTTTA+TGG | 0.088645 | 1.1:-80387673 | MS.gene93136:CDS |
| GAATCATCATCATTTGAATA+AGG | 0.253758 | 1.1:+80386647 | None:intergenic |
| GCACCTTCCTTCCTGCTTCC+TGG | 0.279114 | 1.1:+80387610 | None:intergenic |
| CATTCTTATGAAAGAGCTAT+TGG | 0.318176 | 1.1:-80386229 | MS.gene93136:CDS |
| ATGCTTTGTCACTTGAAGTT+TGG | 0.333030 | 1.1:+80386866 | None:intergenic |
| CTCATAGTTCTCCAATGTAT+TGG | 0.356739 | 1.1:+80386395 | None:intergenic |
| CTTGGTGGATGCTTTCTTCA+AGG | 0.380281 | 1.1:-80386593 | MS.gene93136:intron |
| TCAATACGGTTTCCTTGAAC+TGG | 0.391435 | 1.1:+80389371 | None:intergenic |
| ATTGGGAGATTCTTTGTCTC+GGG | 0.399210 | 1.1:-80386944 | MS.gene93136:intron |
| CTTGAGAGAGATGATGGAAA+TGG | 0.400898 | 1.1:-80386370 | MS.gene93136:CDS |
| TGGATGCCTTTCTACAAGAA+AGG | 0.447111 | 1.1:-80386310 | MS.gene93136:CDS |
| TCTAACTCTCCCAACCGTTC+CGG | 0.449468 | 1.1:-80389563 | MS.gene93136:CDS |
| CCGTTTGATCACTCCAGCTA+TGG | 0.459141 | 1.1:-80389296 | MS.gene93136:CDS |
| TAGTTGAATTCGTTGCTACT+TGG | 0.466999 | 1.1:-80389330 | MS.gene93136:CDS |
| AATTGGGAGATTCTTTGTCT+CGG | 0.468636 | 1.1:-80386945 | MS.gene93136:intron |
| ATTGTACGAACCGGAACGGT+TGG | 0.469903 | 1.1:+80389553 | None:intergenic |
| TTGTACGAACCGGAACGGTT+GGG | 0.477965 | 1.1:+80389554 | None:intergenic |
| TGAAAGAGCTATTGGATCAC+TGG | 0.479014 | 1.1:-80386221 | MS.gene93136:CDS |
| CAATAGCTCTTTCATAAGAA+TGG | 0.481882 | 1.1:+80386230 | None:intergenic |
| TGAGCTATGGATTCCATAGC+TGG | 0.482178 | 1.1:+80389283 | None:intergenic |
| AGACAACCTTTCTTGTAGAA+AGG | 0.482620 | 1.1:+80386304 | None:intergenic |
| TTCTACAAGAAAGGTTGTCT+CGG | 0.483050 | 1.1:-80386301 | MS.gene93136:CDS |
| AGAAAGAGGTACCTGAGCTA+TGG | 0.486986 | 1.1:+80389270 | None:intergenic |
| CTTTGTCTCGGGGAGGAAGA+AGG | 0.488235 | 1.1:-80386933 | MS.gene93136:CDS |
| TTGAGAGAGATGATGGAAAT+GGG | 0.488651 | 1.1:-80386369 | MS.gene93136:CDS |
| CCGCAACTCACTGCAAACTT+AGG | 0.489592 | 1.1:+80389415 | None:intergenic |
| GCAACGAATTCAACTAAAAC+CGG | 0.491722 | 1.1:+80389337 | None:intergenic |
| GTTGAGGTCACCGTATCCAT+TGG | 0.493134 | 1.1:+80389601 | None:intergenic |
| GTGCGATATGTTGAAGAAGA+TGG | 0.494220 | 1.1:-80386274 | MS.gene93136:CDS |
| TGAGCTCTTGAGAGAGATGA+TGG | 0.494475 | 1.1:-80386376 | MS.gene93136:CDS |
| CGTATTGAAATCTGAGCGTC+CGG | 0.497098 | 1.1:-80389356 | MS.gene93136:CDS |
| TAAGGGAAGAGATGAGGATA+CGG | 0.499243 | 1.1:+80389516 | None:intergenic |
| AAGTTATAAGTGAAATGAGT+TGG | 0.501308 | 1.1:+80386339 | None:intergenic |
| TGACCGGTGAGAACGTGGTA+AGG | 0.505991 | 1.1:+80389498 | None:intergenic |
| AGAGTCTTTGCCGAGTTGAC+CGG | 0.508220 | 1.1:+80389482 | None:intergenic |
| TATACTCTTCAATTAGCTGC+GGG | 0.511786 | 1.1:+80387683 | None:intergenic |
| GGGAGGAATTTCCAGGAAGC+AGG | 0.512537 | 1.1:-80387621 | MS.gene93136:CDS |
| AATCAATGAAAGCCAGTTCA+AGG | 0.512971 | 1.1:-80389383 | MS.gene93136:CDS |
| TCTACAAGAAAGGTTGTCTC+GGG | 0.513766 | 1.1:-80386300 | MS.gene93136:CDS |
| TGCAGTGAGTTGCGGTATCA+CGG | 0.517147 | 1.1:-80389407 | MS.gene93136:CDS |
| TTCCCTTACCACGTTCTCAC+CGG | 0.519028 | 1.1:-80389501 | MS.gene93136:CDS |
| AGCTATGGAATCCATAGCTC+AGG | 0.524162 | 1.1:-80389281 | MS.gene93136:intron |
| TACTGATGATGAAGAAAACT+TGG | 0.525201 | 1.1:-80386611 | MS.gene93136:CDS |
| CACGTTCTCACCGGTCAACT+CGG | 0.532357 | 1.1:-80389492 | MS.gene93136:CDS |
| CCTAAGTTTGCAGTGAGTTG+CGG | 0.533531 | 1.1:-80389415 | MS.gene93136:CDS |
| TGAGGATACGGAGATTGAAG+AGG | 0.544293 | 1.1:+80389528 | None:intergenic |
| CGGACGCTCAGATTTCAATA+CGG | 0.547344 | 1.1:+80389357 | None:intergenic |
| CCATAGCTGGAGTGATCAAA+CGG | 0.549337 | 1.1:+80389296 | None:intergenic |
| GAAGAGGTAATTGTACGAAC+CGG | 0.550130 | 1.1:+80389544 | None:intergenic |
| ATGTGAGGTTCTTGATAACA+TGG | 0.553496 | 1.1:-80386184 | MS.gene93136:CDS |
| TCATTGAAATCCAATGGATA+CGG | 0.572041 | 1.1:-80389611 | None:intergenic |
| ACGTGGTAAGGGAAGAGATG+AGG | 0.572348 | 1.1:+80389510 | None:intergenic |
| ACAAGAAAGGTTGTCTCGGG+AGG | 0.572596 | 1.1:-80386297 | MS.gene93136:CDS |
| TCTCTGTAAATCCAATACAT+TGG | 0.575659 | 1.1:-80386406 | MS.gene93136:CDS |
| TGATGATGAAGAAAACTTGG+TGG | 0.578916 | 1.1:-80386608 | MS.gene93136:CDS |
| TTTCCAGGAAGCAGGAAGGA+AGG | 0.591083 | 1.1:-80387613 | MS.gene93136:CDS |
| TGTTGAAGAAGATGGGTGCA+TGG | 0.592619 | 1.1:-80386266 | MS.gene93136:CDS |
| GACCGGTGAGAACGTGGTAA+GGG | 0.599839 | 1.1:+80389499 | None:intergenic |
| TGCGATATGTTGAAGAAGAT+GGG | 0.604617 | 1.1:-80386273 | MS.gene93136:CDS |
| CGAGTTGACCGGTGAGAACG+TGG | 0.605237 | 1.1:+80389493 | None:intergenic |
| GAATTCGTTGCTACTTGGTG+CGG | 0.606167 | 1.1:-80389325 | MS.gene93136:CDS |
| TTATACTCTTCAATTAGCTG+CGG | 0.611346 | 1.1:+80387682 | None:intergenic |
| TTGGGAGATTCTTTGTCTCG+GGG | 0.614014 | 1.1:-80386943 | MS.gene93136:intron |
| CAAGAAAGGTTGTCTCGGGA+GGG | 0.619793 | 1.1:-80386296 | MS.gene93136:CDS |
| AGTGAGCGAAGCTGAAGTTG+AGG | 0.632954 | 1.1:+80389585 | None:intergenic |
| AAGAGCTATTGGATCACTGG+AGG | 0.640281 | 1.1:-80386218 | MS.gene93136:CDS |
| GGAATTTCCAGGAAGCAGGA+AGG | 0.646284 | 1.1:-80387617 | MS.gene93136:CDS |
| TAGCTCTTTCATAAGAATGG+TGG | 0.649905 | 1.1:+80386233 | None:intergenic |
| GGAGATTCTTTGTCTCGGGG+AGG | 0.653228 | 1.1:-80386940 | MS.gene93136:intron |
| AGAGCTATTGGATCACTGGA+GGG | 0.658529 | 1.1:-80386217 | MS.gene93136:CDS |
| GAGGAAGAAGGCAATAAAGA+CGG | 0.658572 | 1.1:-80386921 | MS.gene93136:CDS |
| GAGGGTGATAGAAGCATGTG+AGG | 0.658796 | 1.1:-80386199 | MS.gene93136:CDS |
| TCAAGTGACAAAGCATGCTG+AGG | 0.665766 | 1.1:-80386859 | MS.gene93136:CDS |
| GGTAATTGTACGAACCGGAA+CGG | 0.669877 | 1.1:+80389549 | None:intergenic |
| GAAGGAAGGTGCAATTACAA+AGG | 0.680704 | 1.1:-80387599 | MS.gene93136:intron |
| GCTGGAGTGATCAAACGGCA+AGG | 0.683277 | 1.1:+80389301 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTAATAGATAGTTATTG+AGG | - | chr1.1:80387848-80387867 | MS.gene93136:intron | 15.0% |
| !! | GTACAATTTCAAATTAAAAT+CGG | - | chr1.1:80388450-80388469 | MS.gene93136:intron | 15.0% |
| !! | TTCAAACACTTAAAATATTA+TGG | + | chr1.1:80388611-80388630 | None:intergenic | 15.0% |
| !!! | CTTCAATTTTATTAAGAAAA+AGG | - | chr1.1:80387544-80387563 | MS.gene93136:intron | 15.0% |
| !! | AAATGTGAATAACATATTCA+CGG | - | chr1.1:80388958-80388977 | MS.gene93136:intron | 20.0% |
| !! | CTTACTAAAAAATAATCAGT+TGG | - | chr1.1:80389262-80389281 | MS.gene93136:intron | 20.0% |
| !! | GTATATATTATACACTTCAA+AGG | + | chr1.1:80388424-80388443 | None:intergenic | 20.0% |
| !! | TTCACTTATAACTTCATTTA+TGG | - | chr1.1:80389447-80389466 | MS.gene93136:CDS | 20.0% |
| !!! | ACTTTTTATTTTGTTTTTGC+CGG | - | chr1.1:80386539-80386558 | MS.gene93136:intron | 20.0% |
| !!! | AGCTCTAAAATCATTTATAT+TGG | - | chr1.1:80386746-80386765 | MS.gene93136:intron | 20.0% |
| !!! | ATTGAAGAGTATAAAGTTTA+TGG | - | chr1.1:80388104-80388123 | MS.gene93136:intron | 20.0% |
| !!! | ATTTTTTTAAACTCAGTATC+CGG | + | chr1.1:80386561-80386580 | None:intergenic | 20.0% |
| !!! | GCTCTAAAATCATTTATATT+GGG | - | chr1.1:80386747-80386766 | MS.gene93136:intron | 20.0% |
| !!! | TTTAAGTGTTTGAAATTTGA+TGG | - | chr1.1:80388617-80388636 | MS.gene93136:intron | 20.0% |
| ! | AAGTTATAAGTGAAATGAGT+TGG | + | chr1.1:80389441-80389460 | None:intergenic | 25.0% |
| ! | ACTTCACTAATTTCTTCAAT+TGG | - | chr1.1:80388815-80388834 | MS.gene93136:intron | 25.0% |
| ! | ATTCACATAACAAGTCAAAA+GGG | + | chr1.1:80389084-80389103 | None:intergenic | 25.0% |
| ! | ATTGATATGCTAAATGAAAC+AGG | + | chr1.1:80388319-80388338 | None:intergenic | 25.0% |
| ! | CTTCACTAATTTCTTCAATT+GGG | - | chr1.1:80388816-80388835 | MS.gene93136:intron | 25.0% |
| ! | GAATCATCATCATTTGAATA+AGG | + | chr1.1:80389133-80389152 | None:intergenic | 25.0% |
| ! | TATGGAAATCAAATTGGTTA+TGG | + | chr1.1:80388796-80388815 | None:intergenic | 25.0% |
| ! | TTAAATCAGACCATCAATTT+GGG | + | chr1.1:80387594-80387613 | None:intergenic | 25.0% |
| ! | TTGAAGAAATTAGTGAAGTA+TGG | + | chr1.1:80388814-80388833 | None:intergenic | 25.0% |
| ! | TTTCAAATTATTAGCTGTGT+CGG | - | chr1.1:80387205-80387224 | MS.gene93136:intron | 25.0% |
| !! | AATGTAAATTTTTGTGTGTG+GGG | - | chr1.1:80386864-80386883 | MS.gene93136:CDS | 25.0% |
| !! | ACAATGTAAATTTTTGTGTG+TGG | - | chr1.1:80386862-80386881 | MS.gene93136:CDS | 25.0% |
| !! | CAATGTAAATTTTTGTGTGT+GGG | - | chr1.1:80386863-80386882 | MS.gene93136:CDS | 25.0% |
| !! | TATTACTAGTTTCCCAAAAA+TGG | + | chr1.1:80388286-80388305 | None:intergenic | 25.0% |
| !! | TCGTTCTAAATCAAAATAGT+AGG | + | chr1.1:80389339-80389358 | None:intergenic | 25.0% |
| !!! | CTTTAATTTGCAAATGATGT+CGG | + | chr1.1:80387896-80387915 | None:intergenic | 25.0% |
| !!! | GTTAGTCGTTTATCTTTTTT+AGG | - | chr1.1:80387769-80387788 | MS.gene93136:intron | 25.0% |
| !!! | TTTTGGGAAACTAGTAATAT+GGG | - | chr1.1:80388287-80388306 | MS.gene93136:intron | 25.0% |
| !!! | TTTTTGGGAAACTAGTAATA+TGG | - | chr1.1:80388286-80388305 | MS.gene93136:intron | 25.0% |
| AAAGTTAGAAAGAGAGAAAG+AGG | + | chr1.1:80386524-80386543 | None:intergenic | 30.0% | |
| AAATCATTTATATTGGGCTG+CGG | - | chr1.1:80386753-80386772 | MS.gene93136:intron | 30.0% | |
| AACAAAATGTCTTAAGCTTC+TGG | - | chr1.1:80387079-80387098 | MS.gene93136:intron | 30.0% | |
| AATGCTAAAGGAAGTGATAT+TGG | + | chr1.1:80389231-80389250 | None:intergenic | 30.0% | |
| ACAACATTTGGATGCTTTAT+TGG | - | chr1.1:80388211-80388230 | MS.gene93136:intron | 30.0% | |
| ACTCTCATACATTATATTGC+AGG | - | chr1.1:80388025-80388044 | MS.gene93136:intron | 30.0% | |
| AGCTATTCTTAAACGTTCTT+TGG | - | chr1.1:80387978-80387997 | MS.gene93136:intron | 30.0% | |
| ATGCTAAAGGAAGTGATATT+GGG | + | chr1.1:80389230-80389249 | None:intergenic | 30.0% | |
| ATTATCATTCATACGAATGC+AGG | - | chr1.1:80387799-80387818 | MS.gene93136:intron | 30.0% | |
| CAATAGCTCTTTCATAAGAA+TGG | + | chr1.1:80389550-80389569 | None:intergenic | 30.0% | |
| CATGCAATTCACTGTTTAAT+TGG | - | chr1.1:80386644-80386663 | MS.gene93136:CDS | 30.0% | |
| CATTCACATAACAAGTCAAA+AGG | + | chr1.1:80389085-80389104 | None:intergenic | 30.0% | |
| CATTCTTATGAAAGAGCTAT+TGG | - | chr1.1:80389548-80389567 | MS.gene93136:CDS | 30.0% | |
| CGAAAATTATGTGATCTTTC+AGG | - | chr1.1:80386991-80387010 | MS.gene93136:intron | 30.0% | |
| CGAAAGAACAAACTAGATTA+TGG | + | chr1.1:80388675-80388694 | None:intergenic | 30.0% | |
| CTTAAATCAGACCATCAATT+TGG | + | chr1.1:80387595-80387614 | None:intergenic | 30.0% | |
| GCTATTCTTAAACGTTCTTT+GGG | - | chr1.1:80387979-80387998 | MS.gene93136:intron | 30.0% | |
| GGTGAAACTTAAACAACATT+TGG | - | chr1.1:80388199-80388218 | MS.gene93136:intron | 30.0% | |
| GTGAAGTATGGAAATCAAAT+TGG | + | chr1.1:80388802-80388821 | None:intergenic | 30.0% | |
| TAGTCTACAATCATACTACA+AGG | + | chr1.1:80387033-80387052 | None:intergenic | 30.0% | |
| TCTCTGTAAATCCAATACAT+TGG | - | chr1.1:80389371-80389390 | MS.gene93136:CDS | 30.0% | |
| TTATACTCTTCAATTAGCTG+CGG | + | chr1.1:80388098-80388117 | None:intergenic | 30.0% | |
| TTCAGTCTAATTACAAGTGT+CGG | + | chr1.1:80387174-80387193 | None:intergenic | 30.0% | |
| ! | AGACTATAACACCTCTTTTT+GGG | - | chr1.1:80386814-80386833 | MS.gene93136:intron | 30.0% |
| ! | ATGTAAATTTTTGTGTGTGG+GGG | - | chr1.1:80386865-80386884 | MS.gene93136:CDS | 30.0% |
| ! | ATGTTTCTATCTTCGATTCA+TGG | - | chr1.1:80386903-80386922 | MS.gene93136:CDS | 30.0% |
| ! | CAAATTGATGGTCTGATTTA+AGG | - | chr1.1:80387593-80387612 | MS.gene93136:intron | 30.0% |
| ! | TACTGATGATGAAGAAAACT+TGG | - | chr1.1:80389166-80389185 | MS.gene93136:intron | 30.0% |
| ! | TAGACTATAACACCTCTTTT+TGG | - | chr1.1:80386813-80386832 | MS.gene93136:intron | 30.0% |
| ! | TGATATGATATTACTAGCCT+AGG | - | chr1.1:80387955-80387974 | MS.gene93136:intron | 30.0% |
| ! | TTCCAAATTGTGACCATTTT+TGG | - | chr1.1:80388270-80388289 | MS.gene93136:intron | 30.0% |
| ! | TTTTCTTCATCATCAGTACT+AGG | + | chr1.1:80389164-80389183 | None:intergenic | 30.0% |
| !! | TCCAAATTGTGACCATTTTT+GGG | - | chr1.1:80388271-80388290 | MS.gene93136:intron | 30.0% |
| !! | TGACTTGTTATGTGAATGAT+GGG | - | chr1.1:80389087-80389106 | MS.gene93136:intron | 30.0% |
| !! | TTGACTTGTTATGTGAATGA+TGG | - | chr1.1:80389086-80389105 | MS.gene93136:intron | 30.0% |
| !!! | CTCACTTGTTTTTTGTACTA+AGG | - | chr1.1:80388499-80388518 | MS.gene93136:intron | 30.0% |
| AAATCGGTCTGATCTGTTTA+TGG | - | chr1.1:80388466-80388485 | MS.gene93136:intron | 35.0% | |
| AACGTTTAAGAATAGCTCCT+AGG | + | chr1.1:80387975-80387994 | None:intergenic | 35.0% | |
| AATCAATGAAAGCCAGTTCA+AGG | - | chr1.1:80386394-80386413 | MS.gene93136:CDS | 35.0% | |
| AATTGGGAGATTCTTTGTCT+CGG | - | chr1.1:80388832-80388851 | MS.gene93136:intron | 35.0% | |
| ACCCTGATACTCTTCAAAAA+CGG | - | chr1.1:80388134-80388153 | MS.gene93136:intron | 35.0% | |
| ACGTTAGAAGAATGACTTTG+AGG | - | chr1.1:80387316-80387335 | MS.gene93136:intron | 35.0% | |
| AGACAACCTTTCTTGTAGAA+AGG | + | chr1.1:80389476-80389495 | None:intergenic | 35.0% | |
| AGTACTAATAAGCCTCTGTT+TGG | + | chr1.1:80387742-80387761 | None:intergenic | 35.0% | |
| AGTGACCTTACGATCATTAT+CGG | - | chr1.1:80388739-80388758 | MS.gene93136:intron | 35.0% | |
| CGTTGTAAAATAAGTGGAGT+GGG | + | chr1.1:80389061-80389080 | None:intergenic | 35.0% | |
| CTCATAGTTCTCCAATGTAT+TGG | + | chr1.1:80389385-80389404 | None:intergenic | 35.0% | |
| CTGTGCGTAGATTTAAATTG+CGG | - | chr1.1:80386674-80386693 | MS.gene93136:intron | 35.0% | |
| GCAACGAATTCAACTAAAAC+CGG | + | chr1.1:80386443-80386462 | None:intergenic | 35.0% | |
| GTTGTAAAATAAGTGGAGTG+GGG | + | chr1.1:80389060-80389079 | None:intergenic | 35.0% | |
| TAATAAGCCTCTGTTTGGTA+TGG | + | chr1.1:80387737-80387756 | None:intergenic | 35.0% | |
| TAGCTCTTTCATAAGAATGG+TGG | + | chr1.1:80389547-80389566 | None:intergenic | 35.0% | |
| TAGTTGAATTCGTTGCTACT+TGG | - | chr1.1:80386447-80386466 | MS.gene93136:intron | 35.0% | |
| TATACTCTTCAATTAGCTGC+GGG | + | chr1.1:80388097-80388116 | None:intergenic | 35.0% | |
| TCCCAAAAATGGTCACAATT+TGG | + | chr1.1:80388275-80388294 | None:intergenic | 35.0% | |
| TCCTTTAGCATTGTGATTGA+TGG | - | chr1.1:80389239-80389258 | MS.gene93136:intron | 35.0% | |
| TGCGATATGTTGAAGAAGAT+GGG | - | chr1.1:80389504-80389523 | MS.gene93136:CDS | 35.0% | |
| TGCTAAAGGAAGTGATATTG+GGG | + | chr1.1:80389229-80389248 | None:intergenic | 35.0% | |
| TTCTACAAGAAAGGTTGTCT+CGG | - | chr1.1:80389476-80389495 | MS.gene93136:CDS | 35.0% | |
| TTGTCCAAAACCCAAATTGA+TGG | - | chr1.1:80387581-80387600 | MS.gene93136:intron | 35.0% | |
| TTTGTCGCATATCATTAACG+AGG | + | chr1.1:80389305-80389324 | None:intergenic | 35.0% | |
| ! | ATGCTTTGTCACTTGAAGTT+TGG | + | chr1.1:80388914-80388933 | None:intergenic | 35.0% |
| ! | ATGTGAGGTTCTTGATAACA+TGG | - | chr1.1:80389593-80389612 | MS.gene93136:CDS | 35.0% |
| ! | GACTATAACACCTCTTTTTG+GGG | - | chr1.1:80386815-80386834 | MS.gene93136:intron | 35.0% |
| ! | GCAAATTCAACAGCATTTTG+CGG | + | chr1.1:80386716-80386735 | None:intergenic | 35.0% |
| ! | TGATGATGAAGAAAACTTGG+TGG | - | chr1.1:80389169-80389188 | MS.gene93136:intron | 35.0% |
| !! | AAAGGGCGTTGTAAAATAAG+TGG | + | chr1.1:80389067-80389086 | None:intergenic | 35.0% |
| !! | AAGTTTGGTCTTTTCTTTGC+TGG | + | chr1.1:80388899-80388918 | None:intergenic | 35.0% |
| !! | TTGAGAGAGATGATGGAAAT+GGG | - | chr1.1:80389408-80389427 | MS.gene93136:CDS | 35.0% |
| !!! | AATTTGGGTTTTGGACAAGA+GGG | + | chr1.1:80387579-80387598 | None:intergenic | 35.0% |
| !!! | TTTTTGAAGAGTATCAGGGT+TGG | + | chr1.1:80388134-80388153 | None:intergenic | 35.0% |
| AACCGTCCAAATTGTTAGGT+CGG | - | chr1.1:80389014-80389033 | MS.gene93136:intron | 40.0% | |
| AAGCCTATGAAACACGGATA+CGG | + | chr1.1:80387266-80387285 | None:intergenic | 40.0% | |
| AAGTCATTCTTCTAACGTCG+CGG | + | chr1.1:80387314-80387333 | None:intergenic | 40.0% | |
| ATTGGGAGATTCTTTGTCTC+GGG | - | chr1.1:80388833-80388852 | MS.gene93136:intron | 40.0% | |
| CATATCATTAACGAGGCTCA+GGG | + | chr1.1:80389298-80389317 | None:intergenic | 40.0% | |
| CCCTGATACTCTTCAAAAAC+GGG | - | chr1.1:80388135-80388154 | MS.gene93136:intron | 40.0% | |
| CCTGATACTCTTCAAAAACG+GGG | - | chr1.1:80388136-80388155 | MS.gene93136:intron | 40.0% | |
| GAAGAGGTAATTGTACGAAC+CGG | + | chr1.1:80386236-80386255 | None:intergenic | 40.0% | |
| GAGGAAGAAGGCAATAAAGA+CGG | - | chr1.1:80388856-80388875 | MS.gene93136:intron | 40.0% | |
| GCCATCAATCACAATGCTAA+AGG | + | chr1.1:80389243-80389262 | None:intergenic | 40.0% | |
| GCGTTGTAAAATAAGTGGAG+TGG | + | chr1.1:80389062-80389081 | None:intergenic | 40.0% | |
| GGTGTGTTAGCATTCATGAT+AGG | - | chr1.1:80387614-80387633 | MS.gene93136:CDS | 40.0% | |
| GTGCGATATGTTGAAGAAGA+TGG | - | chr1.1:80389503-80389522 | MS.gene93136:CDS | 40.0% | |
| TAAGGGAAGAGATGAGGATA+CGG | + | chr1.1:80386264-80386283 | None:intergenic | 40.0% | |
| TAGCATTCATGATAGGATGC+CGG | - | chr1.1:80387621-80387640 | MS.gene93136:CDS | 40.0% | |
| TCAATACGGTTTCCTTGAAC+TGG | + | chr1.1:80386409-80386428 | None:intergenic | 40.0% | |
| TCTACAAGAAAGGTTGTCTC+GGG | - | chr1.1:80389477-80389496 | MS.gene93136:CDS | 40.0% | |
| TCTTCGATTCATGGTACATG+TGG | - | chr1.1:80386912-80386931 | MS.gene93136:CDS | 40.0% | |
| TGAAAGAGCTATTGGATCAC+TGG | - | chr1.1:80389556-80389575 | MS.gene93136:CDS | 40.0% | |
| TGATGTCCGACCTAACAATT+TGG | + | chr1.1:80389023-80389042 | None:intergenic | 40.0% | |
| TGCTGTTGAATTTGCAGTAG+TGG | - | chr1.1:80386721-80386740 | MS.gene93136:intron | 40.0% | |
| TGGATGCCTTTCTACAAGAA+AGG | - | chr1.1:80389467-80389486 | MS.gene93136:CDS | 40.0% | |
| TTAGGTCGGACATCATTGTT+GGG | - | chr1.1:80389028-80389047 | MS.gene93136:intron | 40.0% | |
| TTATGCAACACCCCAAAAAG+AGG | + | chr1.1:80386828-80386847 | None:intergenic | 40.0% | |
| ! | GAAGGAAGGTGCAATTACAA+AGG | - | chr1.1:80388178-80388197 | MS.gene93136:intron | 40.0% |
| !! | CAGACCATCAATTTGGGTTT+TGG | + | chr1.1:80387588-80387607 | None:intergenic | 40.0% |
| !! | CTTGAGAGAGATGATGGAAA+TGG | - | chr1.1:80389407-80389426 | MS.gene93136:CDS | 40.0% |
| !! | GAATGACACAGTTTTGTAGC+AGG | - | chr1.1:80388552-80388571 | MS.gene93136:intron | 40.0% |
| !! | GCAAATGATGTCGGCTTTAA+GGG | + | chr1.1:80387887-80387906 | None:intergenic | 40.0% |
| !! | GCTTTAAGGGTAGAATCTCA+GGG | + | chr1.1:80387874-80387893 | None:intergenic | 40.0% |
| !! | TGCAAATGATGTCGGCTTTA+AGG | + | chr1.1:80387888-80387907 | None:intergenic | 40.0% |
| !!! | CAATTTGGGTTTTGGACAAG+AGG | + | chr1.1:80387580-80387599 | None:intergenic | 40.0% |
| !!! | CCCGTTTTTGAAGAGTATCA+GGG | + | chr1.1:80388138-80388157 | None:intergenic | 40.0% |
| AAAAACGGGGAGGAATTTCC+AGG | - | chr1.1:80388149-80388168 | MS.gene93136:intron | 45.0% | |
| AAGAGCTATTGGATCACTGG+AGG | - | chr1.1:80389559-80389578 | MS.gene93136:CDS | 45.0% | |
| ACAATTTGGACGGTTGAGCT+AGG | + | chr1.1:80389009-80389028 | None:intergenic | 45.0% | |
| ACATGTGGATTTCACTCGAC+AGG | - | chr1.1:80386927-80386946 | MS.gene93136:CDS | 45.0% | |
| AGAGCTATTGGATCACTGGA+GGG | - | chr1.1:80389560-80389579 | MS.gene93136:CDS | 45.0% | |
| AGCATTCATGATAGGATGCC+GGG | - | chr1.1:80387622-80387641 | MS.gene93136:CDS | 45.0% | |
| AGCTATGGAATCCATAGCTC+AGG | - | chr1.1:80386496-80386515 | MS.gene93136:intron | 45.0% | |
| AGTCGCCGATAATGATCGTA+AGG | + | chr1.1:80388747-80388766 | None:intergenic | 45.0% | |
| ATCCGTGTTTCATAGGCTTC+TGG | - | chr1.1:80387267-80387286 | MS.gene93136:intron | 45.0% | |
| ATGAAACACGGATACGGACA+TGG | + | chr1.1:80387260-80387279 | None:intergenic | 45.0% | |
| ATTAGCGTTTGCTTGCGAGT+TGG | - | chr1.1:80387383-80387402 | MS.gene93136:intron | 45.0% | |
| CAAATCAACACACAGTGACC+CGG | + | chr1.1:80387643-80387662 | None:intergenic | 45.0% | |
| CACCAGAAGCCTATGAAACA+CGG | + | chr1.1:80387272-80387291 | None:intergenic | 45.0% | |
| CCATAGCTGGAGTGATCAAA+CGG | + | chr1.1:80386484-80386503 | None:intergenic | 45.0% | |
| CCTAAGTTTGCAGTGAGTTG+CGG | - | chr1.1:80386362-80386381 | MS.gene93136:CDS | 45.0% | |
| CGGACGCTCAGATTTCAATA+CGG | + | chr1.1:80386423-80386442 | None:intergenic | 45.0% | |
| CGTATTGAAATCTGAGCGTC+CGG | - | chr1.1:80386421-80386440 | MS.gene93136:CDS | 45.0% | |
| CTTCAAGGTCCTCAAGAGAT+TGG | - | chr1.1:80389199-80389218 | MS.gene93136:intron | 45.0% | |
| GATACTCTTCAAAAACGGGG+AGG | - | chr1.1:80388139-80388158 | MS.gene93136:intron | 45.0% | |
| GATCGTAAGGTCACTGTTCA+AGG | + | chr1.1:80388734-80388753 | None:intergenic | 45.0% | |
| GCATATCATTAACGAGGCTC+AGG | + | chr1.1:80389299-80389318 | None:intergenic | 45.0% | |
| GCTCAACCGTCCAAATTGTT+AGG | - | chr1.1:80389010-80389029 | MS.gene93136:intron | 45.0% | |
| GGTAATTGTACGAACCGGAA+CGG | + | chr1.1:80386231-80386250 | None:intergenic | 45.0% | |
| GTCCGACCTAACAATTTGGA+CGG | + | chr1.1:80389019-80389038 | None:intergenic | 45.0% | |
| GTTAGGTCGGACATCATTGT+TGG | - | chr1.1:80389027-80389046 | MS.gene93136:intron | 45.0% | |
| TCAAGTGACAAAGCATGCTG+AGG | - | chr1.1:80388918-80388937 | MS.gene93136:intron | 45.0% | |
| TGAGCTATGGATTCCATAGC+TGG | + | chr1.1:80386497-80386516 | None:intergenic | 45.0% | |
| TGAGCTCTTGAGAGAGATGA+TGG | - | chr1.1:80389401-80389420 | MS.gene93136:CDS | 45.0% | |
| TGAGGATACGGAGATTGAAG+AGG | + | chr1.1:80386252-80386271 | None:intergenic | 45.0% | |
| TGGGGAAAACCAATCTCTTG+AGG | + | chr1.1:80389211-80389230 | None:intergenic | 45.0% | |
| TGTCCGTATCCGTGTTTCAT+AGG | - | chr1.1:80387260-80387279 | MS.gene93136:intron | 45.0% | |
| TGTTGAAGAAGATGGGTGCA+TGG | - | chr1.1:80389511-80389530 | MS.gene93136:CDS | 45.0% | |
| TTAGCGTTTGCTTGCGAGTT+GGG | - | chr1.1:80387384-80387403 | MS.gene93136:intron | 45.0% | |
| TTGGGAGATTCTTTGTCTCG+GGG | - | chr1.1:80388834-80388853 | MS.gene93136:intron | 45.0% | |
| TTTGAAGGGAGGACTTTGGA+GGG | - | chr1.1:80387408-80387427 | MS.gene93136:intron | 45.0% | |
| ! | AAGCTTCTGGCTATGAAGCA+CGG | - | chr1.1:80387092-80387111 | MS.gene93136:intron | 45.0% |
| ! | CTTGGTGGATGCTTTCTTCA+AGG | - | chr1.1:80389184-80389203 | MS.gene93136:intron | 45.0% |
| ! | GAATTCGTTGCTACTTGGTG+CGG | - | chr1.1:80386452-80386471 | MS.gene93136:intron | 45.0% |
| !! | AGAAAGAGGTACCTGAGCTA+TGG | + | chr1.1:80386510-80386529 | None:intergenic | 45.0% |
| !! | CTTTCAGGTGCTGCTTTGAT+TGG | - | chr1.1:80387006-80387025 | MS.gene93136:intron | 45.0% |
| !! | GGCTTTAAGGGTAGAATCTC+AGG | + | chr1.1:80387875-80387894 | None:intergenic | 45.0% |
| !! | GGGGTGTTGCATAAGACAAT+AGG | - | chr1.1:80386834-80386853 | MS.gene93136:intron | 45.0% |
| !! | TTTTGAAGGGAGGACTTTGG+AGG | - | chr1.1:80387407-80387426 | MS.gene93136:intron | 45.0% |
| !!! | CCCCGTTTTTGAAGAGTATC+AGG | + | chr1.1:80388139-80388158 | None:intergenic | 45.0% |
| !!! | CTTGCGAGTTGGGTTTTGAA+GGG | - | chr1.1:80387394-80387413 | MS.gene93136:intron | 45.0% |
| !!! | ATTTGATATTTTTTAAAAAT+TGG | - | chr1.1:80387452-80387471 | MS.gene93136:intron | 5.0% |
| ACAAGAAAGGTTGTCTCGGG+AGG | - | chr1.1:80389480-80389499 | MS.gene93136:CDS | 50.0% | |
| ACGGACACTCCTCGTATTAG+GGG | - | chr1.1:80387111-80387130 | MS.gene93136:intron | 50.0% | |
| ACGTGGTAAGGGAAGAGATG+AGG | + | chr1.1:80386270-80386289 | None:intergenic | 50.0% | |
| AGTGAGCGAAGCTGAAGTTG+AGG | + | chr1.1:80386195-80386214 | None:intergenic | 50.0% | |
| ATCATTAACGAGGCTCAGGG+AGG | + | chr1.1:80389295-80389314 | None:intergenic | 50.0% | |
| ATTGTACGAACCGGAACGGT+TGG | + | chr1.1:80386227-80386246 | None:intergenic | 50.0% | |
| CAAGAAAGGTTGTCTCGGGA+GGG | - | chr1.1:80389481-80389500 | MS.gene93136:CDS | 50.0% | |
| CACGGACACTCCTCGTATTA+GGG | - | chr1.1:80387110-80387129 | MS.gene93136:intron | 50.0% | |
| CCGCAACTCACTGCAAACTT+AGG | + | chr1.1:80386365-80386384 | None:intergenic | 50.0% | |
| CCGTTTGATCACTCCAGCTA+TGG | - | chr1.1:80386481-80386500 | MS.gene93136:intron | 50.0% | |
| GCTACTGCCATACCAAACAG+AGG | - | chr1.1:80387727-80387746 | MS.gene93136:CDS | 50.0% | |
| GGAATTTCCAGGAAGCAGGA+AGG | - | chr1.1:80388160-80388179 | MS.gene93136:intron | 50.0% | |
| TCATTAACGAGGCTCAGGGA+GGG | + | chr1.1:80389294-80389313 | None:intergenic | 50.0% | |
| TCTAACTCTCCCAACCGTTC+CGG | - | chr1.1:80386214-80386233 | MS.gene93136:CDS | 50.0% | |
| TGCAGTGAGTTGCGGTATCA+CGG | - | chr1.1:80386370-80386389 | MS.gene93136:CDS | 50.0% | |
| TTCCCTTACCACGTTCTCAC+CGG | - | chr1.1:80386276-80386295 | MS.gene93136:CDS | 50.0% | |
| TTGTACGAACCGGAACGGTT+GGG | + | chr1.1:80386226-80386245 | None:intergenic | 50.0% | |
| TTTCCAGGAAGCAGGAAGGA+AGG | - | chr1.1:80388164-80388183 | MS.gene93136:intron | 50.0% | |
| ! | AGAGTCTTTGCCGAGTTGAC+CGG | + | chr1.1:80386298-80386317 | None:intergenic | 50.0% |
| ! | CAGCATTTTGCGGTTTGCAG+CGG | + | chr1.1:80386706-80386725 | None:intergenic | 50.0% |
| ! | GAGGGTGATAGAAGCATGTG+AGG | - | chr1.1:80389578-80389597 | MS.gene93136:CDS | 50.0% |
| !! | GCTTGCGAGTTGGGTTTTGA+AGG | - | chr1.1:80387393-80387412 | MS.gene93136:intron | 50.0% |
| !! | TACAAGTGTCGGTGTCGTGT+CGG | + | chr1.1:80387163-80387182 | None:intergenic | 50.0% |
| !!! | GGGTTTTGAAGGGAGGACTT+TGG | - | chr1.1:80387404-80387423 | MS.gene93136:intron | 50.0% |
| !!! | TGGGTTTTGGACAAGAGGGA+GGG | + | chr1.1:80387575-80387594 | None:intergenic | 50.0% |
| !!! | TTGGGTTTTGGACAAGAGGG+AGG | + | chr1.1:80387576-80387595 | None:intergenic | 50.0% |
| CACGTTCTCACCGGTCAACT+CGG | - | chr1.1:80386285-80386304 | MS.gene93136:CDS | 55.0% | |
| CTTTGTCTCGGGGAGGAAGA+AGG | - | chr1.1:80388844-80388863 | MS.gene93136:intron | 55.0% | |
| GACCGGTGAGAACGTGGTAA+GGG | + | chr1.1:80386281-80386300 | None:intergenic | 55.0% | |
| GACGGTTGAGCTAGGAGTTG+TGG | + | chr1.1:80389001-80389020 | None:intergenic | 55.0% | |
| GCACGGACACTCCTCGTATT+AGG | - | chr1.1:80387109-80387128 | MS.gene93136:intron | 55.0% | |
| GCTGGAGTGATCAAACGGCA+AGG | + | chr1.1:80386479-80386498 | None:intergenic | 55.0% | |
| GGAGATTCTTTGTCTCGGGG+AGG | - | chr1.1:80388837-80388856 | MS.gene93136:intron | 55.0% | |
| GGGAGGAATTTCCAGGAAGC+AGG | - | chr1.1:80388156-80388175 | MS.gene93136:intron | 55.0% | |
| TCGGCGACTGTGTCAACATC+AGG | - | chr1.1:80388758-80388777 | MS.gene93136:intron | 55.0% | |
| TGACCGGTGAGAACGTGGTA+AGG | + | chr1.1:80386282-80386301 | None:intergenic | 55.0% | |
| !! | TATTAGGGGTGTCCCGGTGT+CGG | - | chr1.1:80387125-80387144 | MS.gene93136:intron | 55.0% |
| !! | TCCTCGTATTAGGGGTGTCC+CGG | - | chr1.1:80387119-80387138 | MS.gene93136:intron | 55.0% |
| !!! | GCGAGTTGGGTTTTGAAGGG+AGG | - | chr1.1:80387397-80387416 | MS.gene93136:intron | 55.0% |
| ACCGGGACACCCCTAATACG+AGG | + | chr1.1:80387123-80387142 | None:intergenic | 60.0% | |
| ACGGATACGGACATGGACGC+GGG | + | chr1.1:80387253-80387272 | None:intergenic | 60.0% | |
| CACGACAAGTGTCCGACACC+GGG | + | chr1.1:80387140-80387159 | None:intergenic | 60.0% | |
| CACGGATACGGACATGGACG+CGG | + | chr1.1:80387254-80387273 | None:intergenic | 60.0% | |
| GCACCTTCCTTCCTGCTTCC+TGG | + | chr1.1:80388170-80388189 | None:intergenic | 60.0% | |
| GCACGACAAGTGTCCGACAC+CGG | + | chr1.1:80387141-80387160 | None:intergenic | 60.0% | |
| ! | CGAGTTGACCGGTGAGAACG+TGG | + | chr1.1:80386287-80386306 | None:intergenic | 60.0% |
| AACGAGGCTCAGGGAGGGCA+AGG | + | chr1.1:80389289-80389308 | None:intergenic | 65.0% | |
| CATGGACGCGGGACACGACA+CGG | + | chr1.1:80387242-80387261 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 80386179 | 80389620 | 80386179 | ID=MS.gene93136 |
| chr1.1 | mRNA | 80386179 | 80389620 | 80386179 | ID=MS.gene93136.t1;Parent=MS.gene93136 |
| chr1.1 | exon | 80389282 | 80389620 | 80389282 | ID=MS.gene93136.t1.exon1;Parent=MS.gene93136.t1 |
| chr1.1 | CDS | 80389282 | 80389620 | 80389282 | ID=cds.MS.gene93136.t1;Parent=MS.gene93136.t1 |
| chr1.1 | exon | 80387600 | 80387752 | 80387600 | ID=MS.gene93136.t1.exon2;Parent=MS.gene93136.t1 |
| chr1.1 | CDS | 80387600 | 80387752 | 80387600 | ID=cds.MS.gene93136.t1;Parent=MS.gene93136.t1 |
| chr1.1 | exon | 80386838 | 80386958 | 80386838 | ID=MS.gene93136.t1.exon3;Parent=MS.gene93136.t1 |
| chr1.1 | CDS | 80386838 | 80386958 | 80386838 | ID=cds.MS.gene93136.t1;Parent=MS.gene93136.t1 |
| chr1.1 | exon | 80386594 | 80386676 | 80386594 | ID=MS.gene93136.t1.exon4;Parent=MS.gene93136.t1 |
| chr1.1 | CDS | 80386594 | 80386676 | 80386594 | ID=cds.MS.gene93136.t1;Parent=MS.gene93136.t1 |
| chr1.1 | exon | 80386179 | 80386445 | 80386179 | ID=MS.gene93136.t1.exon5;Parent=MS.gene93136.t1 |
| chr1.1 | CDS | 80386179 | 80386445 | 80386179 | ID=cds.MS.gene93136.t1;Parent=MS.gene93136.t1 |
| Gene Sequence |
| Protein sequence |
