Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000366.01.T01 | XP_013465938.1 | 81.955 | 266 | 8 | 1 | 1 | 266 | 1 | 226 | 4.85E-151 | 431 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000366.01.T01 | I3SWK3 | 81.955 | 266 | 8 | 1 | 1 | 266 | 1 | 226 | 2.32e-151 | 431 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048773.01 | MsG0180000366.01 | 0.817137 | 3.853355e-52 | 2.783229e-49 |
| MsG0080048777.01 | MsG0180000366.01 | 0.817940 | 2.540148e-52 | 1.875492e-49 |
| MsG0080048780.01 | MsG0180000366.01 | 0.824273 | 8.825695e-54 | 7.780140e-51 |
| MsG0080048876.01 | MsG0180000366.01 | 0.820347 | 7.195649e-53 | 5.679251e-50 |
| MsG0080049039.01 | MsG0180000366.01 | 0.803733 | 3.028555e-49 | 1.533489e-46 |
| MsG0080049040.01 | MsG0180000366.01 | 0.837249 | 5.811135e-57 | 7.503982e-54 |
| MsG0080049068.01 | MsG0180000366.01 | 0.817691 | 2.891755e-52 | 2.120585e-49 |
| MsG0180000366.01 | MsG0180000489.01 | 0.805788 | 1.127315e-49 | 6.018091e-47 |
| MsG0180000366.01 | MsG0180000638.01 | 0.810591 | 1.068341e-50 | 6.466085e-48 |
| MsG0180000366.01 | MsG0180000670.01 | 0.815589 | 8.557377e-52 | 5.924417e-49 |
| MsG0180000366.01 | MsG0180000671.01 | 0.800884 | 1.169077e-48 | 5.505632e-46 |
| MsG0180000366.01 | MsG0180000678.01 | 0.818797 | 1.625120e-52 | 1.228526e-49 |
| MsG0180000366.01 | MsG0180000708.01 | 0.807580 | 4.715404e-50 | 2.635964e-47 |
| MsG0180000366.01 | MsG0180000793.01 | 0.821381 | 4.161077e-53 | 3.379795e-50 |
| MsG0180000366.01 | MsG0180001085.01 | 0.814497 | 1.494936e-51 | 1.004742e-48 |
| MsG0180000366.01 | MsG0180001175.01 | 0.848420 | 6.201526e-60 | 1.137465e-56 |
| MsG0180000366.01 | MsG0180001270.01 | 0.843227 | 1.595041e-58 | 2.478860e-55 |
| MsG0180000366.01 | MsG0180001371.01 | 0.823413 | 1.404118e-53 | 1.207997e-50 |
| MsG0180000366.01 | MsG0180001929.01 | 0.847976 | 8.222929e-60 | 1.486736e-56 |
| MsG0180000366.01 | MsG0180002671.01 | 0.814793 | 1.285581e-51 | 8.709034e-49 |
| MsG0180000366.01 | MsG0180002700.01 | 0.801329 | 9.476823e-49 | 4.513417e-46 |
| MsG0180000366.01 | MsG0180003526.01 | 0.808495 | 3.011330e-50 | 1.724394e-47 |
| MsG0180000366.01 | MsG0180004051.01 | 0.803797 | 2.936966e-49 | 1.489569e-46 |
| MsG0180000366.01 | MsG0180004103.01 | 0.813224 | 2.851478e-51 | 1.851233e-48 |
| MsG0180000366.01 | MsG0180004192.01 | 0.830258 | 3.248957e-55 | 3.405428e-52 |
| MsG0180000366.01 | MsG0180004733.01 | 0.837125 | 6.250089e-57 | 8.040903e-54 |
| MsG0180000366.01 | MsG0180004739.01 | 0.800657 | 1.300467e-48 | 6.089118e-46 |
| MsG0180000366.01 | MsG0180005087.01 | 0.806925 | 6.490593e-50 | 3.567255e-47 |
| MsG0180000366.01 | MsG0180005276.01 | 0.824265 | 8.861940e-54 | 7.810368e-51 |
| MsG0180000366.01 | MsG0180005349.01 | 0.850221 | 1.953034e-60 | 3.798823e-57 |
| MsG0180000366.01 | MsG0180005492.01 | 0.802781 | 4.767202e-49 | 2.355810e-46 |
| MsG0180000366.01 | MsG0180005750.01 | 0.830616 | 2.656152e-55 | 2.813129e-52 |
| MsG0180000366.01 | MsG0180005755.01 | 0.818675 | 1.732334e-52 | 1.305196e-49 |
| MsG0180000366.01 | MsG0180005807.01 | 0.800562 | 1.359736e-48 | 6.351186e-46 |
| MsG0180000366.01 | MsG0180005961.01 | 0.820313 | 7.325994e-53 | 5.776601e-50 |
| MsG0180000366.01 | MsG0180006030.01 | 0.818697 | 1.711773e-52 | 1.290489e-49 |
| MsG0180000366.01 | MsG0180006136.01 | 0.801964 | 7.021903e-49 | 3.398232e-46 |
| MsG0180000366.01 | MsG0180006176.01 | 0.827078 | 1.908267e-54 | 1.823034e-51 |
| MsG0180000366.01 | MsG0280006571.01 | 0.834458 | 2.962355e-56 | 3.517866e-53 |
| MsG0180000366.01 | MsG0280006718.01 | 0.823484 | 1.350987e-53 | 1.164768e-50 |
| MsG0180000366.01 | MsG0280006805.01 | 0.803782 | 2.958267e-49 | 1.499781e-46 |
| MsG0180000366.01 | MsG0280006996.01 | 0.860082 | 2.646581e-63 | 7.147358e-60 |
| MsG0180000366.01 | MsG0280007502.01 | 0.812581 | 3.945338e-51 | 2.517998e-48 |
| MsG0180000366.01 | MsG0280007852.01 | 0.803221 | 3.865913e-49 | 1.931894e-46 |
| MsG0180000366.01 | MsG0280008081.01 | 0.805068 | 1.595771e-49 | 8.362697e-47 |
| MsG0180000366.01 | MsG0280008227.01 | 0.809586 | 1.758522e-50 | 1.036607e-47 |
| MsG0180000366.01 | MsG0280008309.01 | 0.803403 | 3.544336e-49 | 1.779554e-46 |
| MsG0180000366.01 | MsG0280008388.01 | 0.812206 | 4.763817e-51 | 3.010076e-48 |
| MsG0180000366.01 | MsG0280008451.01 | 0.812365 | 4.398415e-51 | 2.791162e-48 |
| MsG0180000366.01 | MsG0280008591.01 | 0.839044 | 2.005014e-57 | 2.735434e-54 |
| MsG0180000366.01 | MsG0280008709.01 | 0.811801 | 5.838579e-51 | 3.648860e-48 |
| MsG0180000366.01 | MsG0280008922.01 | 0.823864 | 1.101103e-53 | 9.596103e-51 |
| MsG0180000366.01 | MsG0280008942.01 | 0.802084 | 6.635283e-49 | 3.221107e-46 |
| MsG0180000366.01 | MsG0280009430.01 | 0.834787 | 2.448744e-56 | 2.936186e-53 |
| MsG0180000366.01 | MsG0280009431.01 | 0.818362 | 2.038946e-52 | 1.523149e-49 |
| MsG0180000366.01 | MsG0280009756.01 | 0.805992 | 1.021138e-49 | 5.480060e-47 |
| MsG0180000366.01 | MsG0280009869.01 | 0.803758 | 2.991920e-49 | 1.515958e-46 |
| MsG0180000366.01 | MsG0280010016.01 | 0.809318 | 2.007512e-50 | 1.174901e-47 |
| MsG0180000366.01 | MsG0280010195.01 | 0.802211 | 6.247297e-49 | 3.042527e-46 |
| MsG0180000366.01 | MsG0280010353.01 | 0.817613 | 3.011408e-52 | 2.203568e-49 |
| MsG0180000366.01 | MsG0280010376.01 | 0.836685 | 8.096441e-57 | 1.027910e-53 |
| MsG0180000366.01 | MsG0280010569.01 | 0.811027 | 8.597867e-51 | 5.265038e-48 |
| MsG0180000366.01 | MsG0280010926.01 | 0.825692 | 4.081712e-54 | 3.747482e-51 |
| MsG0180000366.01 | MsG0280011411.01 | 0.847382 | 1.198457e-59 | 2.126287e-56 |
| MsG0180000366.01 | MsG0380011534.01 | 0.820265 | 7.513404e-53 | 5.916552e-50 |
| MsG0180000366.01 | MsG0380011632.01 | 0.803156 | 3.986755e-49 | 1.989025e-46 |
| MsG0180000366.01 | MsG0380012876.01 | 0.809326 | 1.999871e-50 | 1.170712e-47 |
| MsG0180000366.01 | MsG0380013472.01 | 0.805246 | 1.464154e-49 | 7.707908e-47 |
| MsG0180000366.01 | MsG0380013530.01 | 0.819576 | 1.080250e-52 | 8.345251e-50 |
| MsG0180000366.01 | MsG0380014470.01 | 0.808517 | 2.978847e-50 | 1.706767e-47 |
| MsG0180000366.01 | MsG0380014588.01 | 0.811056 | 8.471969e-51 | 5.191834e-48 |
| MsG0180000366.01 | MsG0380014909.01 | 0.806414 | 8.323948e-50 | 4.515094e-47 |
| MsG0180000366.01 | MsG0380015103.01 | 0.803481 | 3.415730e-49 | 1.718411e-46 |
| MsG0180000366.01 | MsG0380015603.01 | 0.836705 | 7.999515e-57 | 1.016226e-53 |
| MsG0180000366.01 | MsG0380015742.01 | 0.803222 | 3.864083e-49 | 1.931032e-46 |
| MsG0180000366.01 | MsG0380015902.01 | 0.824937 | 6.157892e-54 | 5.533487e-51 |
| MsG0180000366.01 | MsG0380016057.01 | 0.824790 | 6.667277e-54 | 5.966489e-51 |
| MsG0180000366.01 | MsG0380016194.01 | 0.805038 | 1.619174e-49 | 8.478558e-47 |
| MsG0180000366.01 | MsG0380016284.01 | 0.832776 | 7.795115e-56 | 8.801096e-53 |
| MsG0180000366.01 | MsG0380016452.01 | 0.821534 | 3.837241e-53 | 3.130091e-50 |
| MsG0180000366.01 | MsG0380016459.01 | 0.807652 | 4.553325e-50 | 2.550174e-47 |
| MsG0180000366.01 | MsG0380016544.01 | 0.806720 | 7.172535e-50 | 3.921266e-47 |
| MsG0180000366.01 | MsG0380016730.01 | 0.807399 | 5.152223e-50 | 2.866869e-47 |
| MsG0180000366.01 | MsG0380016764.01 | 0.817213 | 3.706264e-52 | 2.682493e-49 |
| MsG0180000366.01 | MsG0380016836.01 | 0.842298 | 2.815863e-58 | 4.250951e-55 |
| MsG0180000366.01 | MsG0380017017.01 | 0.810728 | 9.976297e-51 | 6.060533e-48 |
| MsG0180000366.01 | MsG0380017143.01 | 0.828708 | 7.736040e-55 | 7.749828e-52 |
| MsG0180000366.01 | MsG0380017703.01 | 0.834481 | 2.923773e-56 | 3.474277e-53 |
| MsG0180000366.01 | MsG0380017968.01 | 0.812823 | 3.491698e-51 | 2.242537e-48 |
| MsG0180000366.01 | MsG0380017976.01 | 0.805700 | 1.175965e-49 | 6.263965e-47 |
| MsG0180000366.01 | MsG0380018037.01 | 0.847751 | 9.487473e-60 | 1.703186e-56 |
| MsG0180000366.01 | MsG0380018061.01 | 0.801571 | 8.454987e-49 | 4.051321e-46 |
| MsG0180000366.01 | MsG0380018069.01 | 0.820942 | 5.253840e-53 | 4.215948e-50 |
| MsG0180000366.01 | MsG0480018644.01 | 0.815611 | 8.458237e-52 | 5.859880e-49 |
| MsG0180000366.01 | MsG0480019592.01 | 0.812747 | 3.628167e-51 | 2.325752e-48 |
| MsG0180000366.01 | MsG0480019641.01 | 0.819964 | 8.806646e-53 | 6.877459e-50 |
| MsG0180000366.01 | MsG0480019751.01 | 0.828290 | 9.757791e-55 | 9.656872e-52 |
| MsG0180000366.01 | MsG0480019956.01 | 0.822923 | 1.826894e-53 | 1.550344e-50 |
| MsG0180000366.01 | MsG0480019971.01 | 0.815889 | 7.335240e-52 | 5.119918e-49 |
| MsG0180000366.01 | MsG0480019974.01 | 0.812780 | 3.567904e-51 | 2.288950e-48 |
| MsG0180000366.01 | MsG0480020408.01 | 0.848992 | 4.304065e-60 | 8.042322e-57 |
| MsG0180000366.01 | MsG0480020690.01 | 0.824083 | 9.778578e-54 | 8.574318e-51 |
| MsG0180000366.01 | MsG0480020753.01 | 0.821852 | 3.239032e-53 | 2.666249e-50 |
| MsG0180000366.01 | MsG0480020889.01 | 0.801760 | 7.733077e-49 | 3.723105e-46 |
| MsG0180000366.01 | MsG0480021168.01 | 0.825051 | 5.785921e-54 | 5.216333e-51 |
| MsG0180000366.01 | MsG0480021248.01 | 0.814118 | 1.812964e-51 | 1.205949e-48 |
| MsG0180000366.01 | MsG0480021294.01 | 0.823455 | 1.372759e-53 | 1.182516e-50 |
| MsG0180000366.01 | MsG0480021406.01 | 0.818357 | 2.044775e-52 | 1.527261e-49 |
| MsG0180000366.01 | MsG0480021682.01 | 0.839457 | 1.566611e-57 | 2.164738e-54 |
| MsG0180000366.01 | MsG0480021783.01 | 0.842647 | 2.275874e-58 | 3.472994e-55 |
| MsG0180000366.01 | MsG0480021795.01 | 0.802245 | 6.148055e-49 | 2.996891e-46 |
| MsG0180000366.01 | MsG0480021803.01 | 0.802367 | 5.801495e-49 | 2.836874e-46 |
| MsG0180000366.01 | MsG0480022130.01 | 0.840727 | 7.307036e-58 | 1.050225e-54 |
| MsG0180000366.01 | MsG0480022149.01 | 0.806142 | 9.496363e-50 | 5.115666e-47 |
| MsG0180000366.01 | MsG0480022646.01 | 0.827318 | 1.671155e-54 | 1.607891e-51 |
| MsG0180000366.01 | MsG0480022647.01 | 0.836461 | 9.233129e-57 | 1.164396e-53 |
| MsG0180000366.01 | MsG0480023098.01 | 0.873898 | 1.028526e-67 | 4.537679e-64 |
| MsG0180000366.01 | MsG0480023166.01 | 0.800645 | 1.307552e-48 | 6.120451e-46 |
| MsG0180000366.01 | MsG0480023216.01 | 0.814897 | 1.219357e-51 | 8.283224e-49 |
| MsG0180000366.01 | MsG0480023314.01 | 0.861909 | 7.362693e-64 | 2.116360e-60 |
| MsG0180000366.01 | MsG0480023351.01 | 0.829650 | 4.572438e-55 | 4.709010e-52 |
| MsG0180000366.01 | MsG0480023367.01 | 0.809055 | 2.285930e-50 | 1.328474e-47 |
| MsG0180000366.01 | MsG0480023389.01 | 0.879476 | 1.207759e-69 | 6.557632e-66 |
| MsG0180000366.01 | MsG0480023422.01 | 0.822420 | 2.391977e-53 | 2.001154e-50 |
| MsG0180000366.01 | MsG0480023444.01 | 0.805781 | 1.130836e-49 | 6.035930e-47 |
| MsG0180000366.01 | MsG0480023452.01 | 0.833976 | 3.913594e-56 | 4.580893e-53 |
| MsG0180000366.01 | MsG0480023553.01 | 0.808364 | 3.212209e-50 | 1.833207e-47 |
| MsG0180000366.01 | MsG0480023845.01 | 0.837047 | 6.546063e-57 | 8.401886e-54 |
| MsG0180000366.01 | MsG0480023990.01 | 0.810255 | 1.262261e-50 | 7.572133e-48 |
| MsG0180000366.01 | MsG0480023991.01 | 0.809989 | 1.440524e-50 | 8.582160e-48 |
| MsG0180000366.01 | MsG0480023992.01 | 0.801339 | 9.435990e-49 | 4.495031e-46 |
| MsG0180000366.01 | MsG0580024679.01 | 0.843164 | 1.658171e-58 | 2.571779e-55 |
| MsG0180000366.01 | MsG0580024873.01 | 0.804265 | 2.347464e-49 | 1.204948e-46 |
| MsG0180000366.01 | MsG0580025295.01 | 0.828658 | 7.952725e-55 | 7.955621e-52 |
| MsG0180000366.01 | MsG0580025845.01 | 0.846314 | 2.347203e-59 | 4.023543e-56 |
| MsG0180000366.01 | MsG0580025859.01 | 0.811963 | 5.381891e-51 | 3.378120e-48 |
| MsG0180000366.01 | MsG0580026271.01 | 0.834202 | 3.434302e-56 | 4.046528e-53 |
| MsG0180000366.01 | MsG0580027394.01 | 0.817997 | 2.466011e-52 | 1.823645e-49 |
| MsG0180000366.01 | MsG0580027979.01 | 0.801694 | 7.977405e-49 | 3.834288e-46 |
| MsG0180000366.01 | MsG0580028024.01 | 0.802219 | 6.222529e-49 | 3.031105e-46 |
| MsG0180000366.01 | MsG0580028306.01 | 0.839651 | 1.395055e-57 | 1.939105e-54 |
| MsG0180000366.01 | MsG0580028461.01 | 0.804326 | 2.279713e-49 | 1.172027e-46 |
| MsG0180000366.01 | MsG0580029529.01 | 0.801615 | 8.280841e-49 | 3.972216e-46 |
| MsG0180000366.01 | MsG0580029732.01 | 0.809985 | 1.443088e-50 | 8.596610e-48 |
| MsG0180000366.01 | MsG0580029862.01 | 0.829433 | 5.162598e-55 | 5.282983e-52 |
| MsG0180000366.01 | MsG0580029967.01 | 0.818313 | 2.092532e-52 | 1.560936e-49 |
| MsG0180000366.01 | MsG0680030516.01 | 0.826650 | 2.415218e-54 | 2.278670e-51 |
| MsG0180000366.01 | MsG0680030627.01 | 0.810794 | 9.653643e-51 | 5.874786e-48 |
| MsG0180000366.01 | MsG0680030858.01 | 0.815302 | 9.911046e-52 | 6.807593e-49 |
| MsG0180000366.01 | MsG0680030957.01 | 0.859708 | 3.431267e-63 | 9.145788e-60 |
| MsG0180000366.01 | MsG0680031115.01 | 0.808581 | 2.886253e-50 | 1.656427e-47 |
| MsG0180000366.01 | MsG0680032238.01 | 0.817532 | 3.141143e-52 | 2.293395e-49 |
| MsG0180000366.01 | MsG0680032515.01 | 0.830586 | 2.701619e-55 | 2.858585e-52 |
| MsG0180000366.01 | MsG0680033377.01 | 0.821675 | 3.558549e-53 | 2.914467e-50 |
| MsG0180000366.01 | MsG0680033901.01 | 0.801608 | 8.308536e-49 | 3.984823e-46 |
| MsG0180000366.01 | MsG0680035731.01 | 0.809561 | 1.780278e-50 | 1.048702e-47 |
| MsG0180000366.01 | MsG0680035791.01 | 0.837185 | 6.033906e-57 | 7.776892e-54 |
| MsG0180000366.01 | MsG0780037184.01 | 0.843591 | 1.275664e-58 | 2.005646e-55 |
| MsG0180000366.01 | MsG0780037363.01 | 0.805690 | 1.181962e-49 | 6.294150e-47 |
| MsG0180000366.01 | MsG0780037436.01 | 0.812146 | 4.909923e-51 | 3.097397e-48 |
| MsG0180000366.01 | MsG0780038616.01 | 0.811166 | 8.020784e-51 | 4.929262e-48 |
| MsG0180000366.01 | MsG0780038653.01 | 0.810493 | 1.121396e-50 | 6.769453e-48 |
| MsG0180000366.01 | MsG0780038784.01 | 0.837146 | 6.174651e-57 | 7.948936e-54 |
| MsG0180000366.01 | MsG0780038986.01 | 0.819038 | 1.432200e-52 | 1.090039e-49 |
| MsG0180000366.01 | MsG0780039675.01 | 0.810677 | 1.023403e-50 | 6.208555e-48 |
| MsG0180000366.01 | MsG0780039746.01 | 0.842850 | 2.009977e-58 | 3.086878e-55 |
| MsG0180000366.01 | MsG0780039853.01 | 0.814933 | 1.197002e-51 | 8.139346e-49 |
| MsG0180000366.01 | MsG0780039975.01 | 0.802034 | 6.792368e-49 | 3.293176e-46 |
| MsG0180000366.01 | MsG0780039988.01 | 0.830618 | 2.653272e-55 | 2.810211e-52 |
| MsG0180000366.01 | MsG0780040284.01 | 0.839812 | 1.266455e-57 | 1.769186e-54 |
| MsG0180000366.01 | MsG0780040331.01 | 0.822398 | 2.420442e-53 | 2.023721e-50 |
| MsG0180000366.01 | MsG0780040343.01 | 0.815391 | 9.467690e-52 | 6.519183e-49 |
| MsG0180000366.01 | MsG0780041138.01 | 0.816681 | 4.878533e-52 | 3.479784e-49 |
| MsG0180000366.01 | MsG0780041174.01 | 0.843211 | 1.610431e-58 | 2.501504e-55 |
| MsG0180000366.01 | MsG0780041272.01 | 0.800036 | 1.739886e-48 | 8.018999e-46 |
| MsG0180000366.01 | MsG0780041706.01 | 0.814688 | 1.356647e-51 | 9.164537e-49 |
| MsG0180000366.01 | MsG0780041778.01 | 0.809047 | 2.294431e-50 | 1.333137e-47 |
| MsG0180000366.01 | MsG0780041828.01 | 0.828122 | 1.071472e-54 | 1.055268e-51 |
| MsG0180000366.01 | MsG0880041931.01 | 0.804964 | 1.677346e-49 | 8.767016e-47 |
| MsG0180000366.01 | MsG0880042044.01 | 0.841347 | 5.019796e-58 | 7.354700e-55 |
| MsG0180000366.01 | MsG0880043032.01 | 0.802842 | 4.630305e-49 | 2.291740e-46 |
| MsG0180000366.01 | MsG0880043075.01 | 0.814132 | 1.800244e-51 | 1.197957e-48 |
| MsG0180000366.01 | MsG0880043249.01 | 0.803081 | 4.133492e-49 | 2.058091e-46 |
| MsG0180000366.01 | MsG0880043250.01 | 0.802439 | 5.607258e-49 | 2.746812e-46 |
| MsG0180000366.01 | MsG0880043277.01 | 0.827449 | 1.554661e-54 | 1.501451e-51 |
| MsG0180000366.01 | MsG0880043278.01 | 0.816321 | 5.874209e-52 | 4.149249e-49 |
| MsG0180000366.01 | MsG0880044392.01 | 0.831341 | 1.763849e-55 | 1.908516e-52 |
| MsG0180000366.01 | MsG0880044414.01 | 0.842059 | 3.258009e-58 | 4.880997e-55 |
| MsG0180000366.01 | MsG0880044487.01 | 0.836770 | 7.700425e-57 | 9.802122e-54 |
| MsG0180000366.01 | MsG0880044985.01 | 0.810901 | 9.153833e-51 | 5.586727e-48 |
| MsG0180000366.01 | MsG0880045101.01 | 0.822646 | 2.119291e-53 | 1.784510e-50 |
| MsG0180000366.01 | MsG0880045361.01 | 0.806080 | 9.785025e-50 | 5.262775e-47 |
| MsG0180000366.01 | MsG0880046054.01 | 0.859905 | 2.991805e-63 | 8.029940e-60 |
| MsG0180000366.01 | MsG0880046267.01 | 0.847395 | 1.188004e-59 | 2.108709e-56 |
| MsG0180000366.01 | MsG0880046382.01 | 0.821647 | 3.612645e-53 | 2.956336e-50 |
| MsG0180000366.01 | MsG0880046764.01 | 0.837528 | 4.928931e-57 | 6.420702e-54 |
| MsG0180000366.01 | MsG0880046765.01 | 0.875008 | 4.322499e-68 | 1.987094e-64 |
| MsG0180000366.01 | MsG0880046791.01 | 0.835584 | 1.541345e-56 | 1.892999e-53 |
| MsG0180000366.01 | MsG0880047234.01 | 0.820602 | 6.290535e-53 | 4.999543e-50 |
| MsG0180000366.01 | MsG0880047451.01 | 0.804346 | 2.257754e-49 | 1.161360e-46 |
| MsG0180000366.01 | MsG0880047587.01 | 0.851497 | 8.537878e-61 | 1.731439e-57 |
| MsG0180000366.01 | MsG0880047656.01 | 0.822462 | 2.339157e-53 | 1.959209e-50 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000366.01.T01 | MTR_1g017160 | 81.955 | 266 | 8 | 1 | 1 | 266 | 1 | 226 | 5.87e-155 | 431 |
| MsG0180000366.01.T01 | MTR_1g034050 | 23.457 | 162 | 121 | 1 | 86 | 244 | 49 | 210 | 2.30e-14 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000366.01.T01 | AT1G49510 | 28.125 | 128 | 92 | 0 | 116 | 243 | 88 | 215 | 3.21e-12 | 65.1 |
| MsG0180000366.01.T01 | AT1G49510 | 28.125 | 128 | 92 | 0 | 116 | 243 | 88 | 215 | 3.21e-12 | 65.1 |
| MsG0180000366.01.T01 | AT1G49510 | 28.125 | 128 | 92 | 0 | 116 | 243 | 30 | 157 | 3.24e-12 | 63.9 |
Find 67 sgRNAs with CRISPR-Local
Find 124 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTTCAACTTCCAAGTTTC+GGG | 0.178366 | 1:-4972109 | MsG0180000366.01.T01:intron |
| TTCCTTCAACTTCCAAGTTT+CGG | 0.256394 | 1:-4972110 | MsG0180000366.01.T01:CDS |
| TAACTTCATTAGGCTCATTA+TGG | 0.304347 | 1:+4970688 | None:intergenic |
| GATAAATTTCTGAGCATTTA+CGG | 0.315758 | 1:+4970766 | None:intergenic |
| CTCCAAGGAAATTCTTGAAC+CGG | 0.317771 | 1:+4970615 | None:intergenic |
| AAGATAGCGTCGACATCTTT+AGG | 0.320026 | 1:+4972142 | None:intergenic |
| CCTTGTGGCTGATTTCTTGA+AGG | 0.337664 | 1:-4970430 | MsG0180000366.01.T01:CDS |
| TGATTTGAAATGGCGTCGTT+TGG | 0.340202 | 1:-4970273 | MsG0180000366.01.T01:CDS |
| CATAAGCCGCCGCTAATCTA+TGG | 0.355654 | 1:+4969862 | None:intergenic |
| TGATGCAGTTACTTTGGTAT+TGG | 0.370619 | 1:-4970157 | MsG0180000366.01.T01:CDS |
| ATTCCCGTTGGCCTCTTTGT+TGG | 0.381717 | 1:-4970456 | MsG0180000366.01.T01:CDS |
| AATGAAGTTAAAATACAAAT+CGG | 0.400177 | 1:-4970675 | MsG0180000366.01.T01:CDS |
| ATTATGTTATAACTTTAGAT+AGG | 0.403342 | 1:-4970902 | MsG0180000366.01.T01:CDS |
| AATGAACACTCCTTCCGGTT+TGG | 0.403905 | 1:-4970099 | MsG0180000366.01.T01:CDS |
| TCCCGGTTCAAGAATTTCCT+TGG | 0.409789 | 1:-4970617 | MsG0180000366.01.T01:CDS |
| CAGAAAATGAACACTCCTTC+CGG | 0.415455 | 1:-4970104 | MsG0180000366.01.T01:CDS |
| TGTTATAACTTTAGATAGGA+TGG | 0.417003 | 1:-4970898 | MsG0180000366.01.T01:CDS |
| TAACATAATTCATAAATTGT+AGG | 0.418773 | 1:+4970916 | None:intergenic |
| GATTTGAAATGGCGTCGTTT+GGG | 0.422850 | 1:-4970272 | MsG0180000366.01.T01:CDS |
| GACAGGAGAATGATTTGAAA+TGG | 0.426454 | 1:-4970283 | MsG0180000366.01.T01:intron |
| TATTTATTCCCTTGTTCAAG+TGG | 0.438460 | 1:-4969930 | MsG0180000366.01.T01:three_prime_UTR |
| ATTGTTTGACTTATGCAATC+TGG | 0.440905 | 1:-4970874 | MsG0180000366.01.T01:CDS |
| GGAAATTCTTGAACCGGGAT+TGG | 0.446196 | 1:+4970621 | None:intergenic |
| ACACCAACAAAGAGGCCAAC+GGG | 0.464195 | 1:+4970453 | None:intergenic |
| ATCCATCGATGCCTCCAAAC+CGG | 0.479566 | 1:+4970085 | None:intergenic |
| GAACACTCCTTCCGGTTTGG+AGG | 0.482482 | 1:-4970096 | MsG0180000366.01.T01:CDS |
| TTCCGGTTTGGAGGCATCGA+TGG | 0.488671 | 1:-4970087 | MsG0180000366.01.T01:CDS |
| TGCTATAAATAAACGAACAT+TGG | 0.493793 | 1:+4970844 | None:intergenic |
| ATGAAGTTAAAATACAAATC+GGG | 0.508574 | 1:-4970674 | MsG0180000366.01.T01:CDS |
| ACATGGTTCACAACACAACC+AGG | 0.508763 | 1:-4970212 | MsG0180000366.01.T01:CDS |
| AGTGGATGAAACAAACTCAA+TGG | 0.513698 | 1:-4969912 | MsG0180000366.01.T01:three_prime_UTR |
| CCTCTTTGTTGGTGTCCTTG+TGG | 0.514383 | 1:-4970445 | MsG0180000366.01.T01:CDS |
| CACCGATGCTTTAATTGAAG+TGG | 0.515271 | 1:+4970716 | None:intergenic |
| TGACGGAGTTGGCATCGAAA+CGG | 0.517136 | 1:+4970792 | None:intergenic |
| TCCAAGGAAATTCTTGAACC+GGG | 0.519277 | 1:+4970616 | None:intergenic |
| ACCCGAAACTTGGAAGTTGA+AGG | 0.533653 | 1:+4972108 | None:intergenic |
| CTGCAGTATGATCTTAATGA+AGG | 0.536773 | 1:+4969995 | None:intergenic |
| GTGGACTGATGCAGTTACTT+TGG | 0.537937 | 1:-4970163 | MsG0180000366.01.T01:CDS |
| CTGAGCATTTACGGAAATGA+CGG | 0.538092 | 1:+4970775 | None:intergenic |
| ACTACATCTTCTTGCGCAAG+AGG | 0.547287 | 1:-4970565 | MsG0180000366.01.T01:CDS |
| CCACAAGGACACCAACAAAG+AGG | 0.551906 | 1:+4970445 | None:intergenic |
| ATGAACAAGATGATTGAAAG+TGG | 0.558348 | 1:+4969965 | None:intergenic |
| TTGTTTCATCCACTTGAACA+AGG | 0.558419 | 1:+4969921 | None:intergenic |
| ATTTACGGAAATGACGGAGT+TGG | 0.560264 | 1:+4970781 | None:intergenic |
| CAAAGAAGCATTACCAATCC+CGG | 0.561948 | 1:-4970634 | MsG0180000366.01.T01:CDS |
| TGTTTCATCCACTTGAACAA+GGG | 0.563976 | 1:+4969922 | None:intergenic |
| TACCACTTCAATTAAAGCAT+CGG | 0.577368 | 1:-4970718 | MsG0180000366.01.T01:CDS |
| CGAGTATAAAATGTTTGACT+CGG | 0.577558 | 1:+4970741 | None:intergenic |
| AGATGAAGTTCATGTCAGCT+TGG | 0.582465 | 1:+4970038 | None:intergenic |
| TTCATGTAACCATAGATTAG+CGG | 0.583962 | 1:-4969871 | MsG0180000366.01.T01:three_prime_UTR |
| TAAATAAACGAACATTGGAA+TGG | 0.584832 | 1:+4970849 | None:intergenic |
| GACACCAACAAAGAGGCCAA+CGG | 0.588142 | 1:+4970452 | None:intergenic |
| TGGCGTCGTTTGGGCTTGTG+TGG | 0.592958 | 1:-4970263 | MsG0180000366.01.T01:CDS |
| AATACAAATCGGGATCATGA+AGG | 0.594143 | 1:-4970664 | MsG0180000366.01.T01:CDS |
| CACTTCAATTAAAGCATCGG+TGG | 0.597546 | 1:-4970715 | MsG0180000366.01.T01:CDS |
| TGGTCAAGTTTATGTCGACA+TGG | 0.610369 | 1:-4970229 | MsG0180000366.01.T01:CDS |
| TTGCGCAAGAGGCATTGAAG+TGG | 0.619285 | 1:-4970554 | MsG0180000366.01.T01:CDS |
| ATCGATGCCTCCAAACCGGA+AGG | 0.619747 | 1:+4970089 | None:intergenic |
| GTATGTTGAGCATTTCTCCA+AGG | 0.620282 | 1:+4970600 | None:intergenic |
| CGAGAATTAATCATTCCCGT+TGG | 0.622166 | 1:-4970468 | MsG0180000366.01.T01:CDS |
| ATGTAACCATAGATTAGCGG+CGG | 0.646438 | 1:-4969868 | MsG0180000366.01.T01:three_prime_UTR |
| ACATGCAAAAGAAACACCCC+TGG | 0.646921 | 1:+4970194 | None:intergenic |
| AGAATTGTTTCATCAATCCG+AGG | 0.652715 | 1:-4970397 | MsG0180000366.01.T01:intron |
| CTTGCGCAAGAAGATGTAGT+CGG | 0.655925 | 1:+4970568 | None:intergenic |
| CCTTCAAGAAATCAGCCACA+AGG | 0.660555 | 1:+4970430 | None:intergenic |
| CATGGTTCACAACACAACCA+GGG | 0.664438 | 1:-4970211 | MsG0180000366.01.T01:CDS |
| ATGGTTCACAACACAACCAG+GGG | 0.684119 | 1:-4970210 | MsG0180000366.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATTAATAATGTAATAAAAA+AGG | + | Chr1:4971621-4971640 | None:intergenic | 10.0% |
| !!! | ATATATTTTGTCTTTAAAAA+AGG | - | Chr1:4970912-4970931 | MsG0180000366.01.T01:CDS | 10.0% |
| !! | AATGAAGTTAAAATACAAAT+CGG | - | Chr1:4971282-4971301 | MsG0180000366.01.T01:intron | 15.0% |
| !! | ATTATGTTATAACTTTAGAT+AGG | - | Chr1:4971055-4971074 | MsG0180000366.01.T01:intron | 15.0% |
| !! | TAACATAATTCATAAATTGT+AGG | + | Chr1:4971044-4971063 | None:intergenic | 15.0% |
| !!! | AAAACATTTTATAGCTTATA+CGG | - | Chr1:4970297-4970316 | MsG0180000366.01.T01:intron | 15.0% |
| !!! | AAAGTAAATAGTTTTATTGT+TGG | - | Chr1:4970598-4970617 | MsG0180000366.01.T01:CDS | 15.0% |
| !!! | AAATAATTTTTGACATGTTT+AGG | - | Chr1:4970236-4970255 | MsG0180000366.01.T01:CDS | 15.0% |
| !!! | ATTTGTATTTTAACTTCATT+AGG | + | Chr1:4971282-4971301 | None:intergenic | 15.0% |
| !! | ATGAAGTTAAAATACAAATC+GGG | - | Chr1:4971283-4971302 | MsG0180000366.01.T01:intron | 20.0% |
| !! | ATGTAATAAAAAAGGAATTG+TGG | + | Chr1:4971613-4971632 | None:intergenic | 20.0% |
| !! | TCTCTTAATTGCATTAATTA+AGG | - | Chr1:4969946-4969965 | MsG0180000366.01.T01:three_prime_UTR | 20.0% |
| !!! | AAAGCTATTTCTATAACAAA+AGG | + | Chr1:4970344-4970363 | None:intergenic | 20.0% |
| !!! | ATTTCAATGCAATGTTTTAA+AGG | + | Chr1:4969904-4969923 | None:intergenic | 20.0% |
| !!! | TATTTCTAATCATTCATTTC+TGG | + | Chr1:4970486-4970505 | None:intergenic | 20.0% |
| ! | GATAAATTTCTGAGCATTTA+CGG | + | Chr1:4971194-4971213 | None:intergenic | 25.0% |
| ! | TAAATAAACGAACATTGGAA+TGG | + | Chr1:4971111-4971130 | None:intergenic | 25.0% |
| ! | TAATAATGCAACATATACCT+CGG | + | Chr1:4971580-4971599 | None:intergenic | 25.0% |
| ! | TGCTATAAATAAACGAACAT+TGG | + | Chr1:4971116-4971135 | None:intergenic | 25.0% |
| ! | TGTTATAACTTTAGATAGGA+TGG | - | Chr1:4971059-4971078 | MsG0180000366.01.T01:intron | 25.0% |
| !! | ACTTTTGATAAACCATACAT+AGG | + | Chr1:4970790-4970809 | None:intergenic | 25.0% |
| !! | ATTAAGTTGTTAATCCAAAC+AGG | - | Chr1:4970392-4970411 | MsG0180000366.01.T01:intron | 25.0% |
| !! | TTAAGTTGTTAATCCAAACA+GGG | - | Chr1:4970393-4970412 | MsG0180000366.01.T01:intron | 25.0% |
| !!! | GTAAATAGTTTTATTGTTGG+TGG | - | Chr1:4970601-4970620 | MsG0180000366.01.T01:CDS | 25.0% |
| !!! | TTGGTATTGGAGAAATTTTA+TGG | - | Chr1:4971813-4971832 | MsG0180000366.01.T01:intron | 25.0% |
| AATCACTTGCACATACAATA+AGG | + | Chr1:4971009-4971028 | None:intergenic | 30.0% | |
| ATATTTATTGTATCTGCTCG+TGG | - | Chr1:4971641-4971660 | MsG0180000366.01.T01:intron | 30.0% | |
| ATGAACAAGATGATTGAAAG+TGG | + | Chr1:4971995-4972014 | None:intergenic | 30.0% | |
| ATTTAGCATGATTATCTTCG+TGG | - | Chr1:4970762-4970781 | MsG0180000366.01.T01:CDS | 30.0% | |
| CATAGTCTGTACTATAATCA+AGG | + | Chr1:4970843-4970862 | None:intergenic | 30.0% | |
| CGAGTATAAAATGTTTGACT+CGG | + | Chr1:4971219-4971238 | None:intergenic | 30.0% | |
| TAACTTCATTAGGCTCATTA+TGG | + | Chr1:4971272-4971291 | None:intergenic | 30.0% | |
| TACCACTTCAATTAAAGCAT+CGG | - | Chr1:4971239-4971258 | MsG0180000366.01.T01:intron | 30.0% | |
| TATAGTGTAAGAAGTTGCAA+AGG | - | Chr1:4970572-4970591 | MsG0180000366.01.T01:CDS | 30.0% | |
| TATTTATTCCCTTGTTCAAG+TGG | - | Chr1:4972027-4972046 | MsG0180000366.01.T01:intron | 30.0% | |
| TATTTATTGTATCTGCTCGT+GGG | - | Chr1:4971642-4971661 | MsG0180000366.01.T01:intron | 30.0% | |
| TCAGTTGTTAACATCATCAA+TGG | - | Chr1:4970626-4970645 | MsG0180000366.01.T01:CDS | 30.0% | |
| TTCATGTAACCATAGATTAG+CGG | - | Chr1:4972086-4972105 | MsG0180000366.01.T01:intron | 30.0% | |
| ! | ATCAATGGAGATGTCTTTTA+CGG | - | Chr1:4970641-4970660 | MsG0180000366.01.T01:CDS | 30.0% |
| ! | ATTGTTTGACTTATGCAATC+TGG | - | Chr1:4971083-4971102 | MsG0180000366.01.T01:intron | 30.0% |
| ! | CTTATTTCTTTAAGCTCTCA+AGG | - | Chr1:4970107-4970126 | MsG0180000366.01.T01:CDS | 30.0% |
| ! | TATCTTTCATTCTTTTGTGC+AGG | - | Chr1:4971137-4971156 | MsG0180000366.01.T01:intron | 30.0% |
| ! | TTTCTTTTGCATGTTGCAAA+TGG | - | Chr1:4971772-4971791 | MsG0180000366.01.T01:intron | 30.0% |
| !!! | TGTGTTTTTATTTTGCTCTG+AGG | - | Chr1:4970811-4970830 | MsG0180000366.01.T01:CDS | 30.0% |
| AATACAAATCGGGATCATGA+AGG | - | Chr1:4971293-4971312 | MsG0180000366.01.T01:intron | 35.0% | |
| ACAAAAACATACCCGAAACT+TGG | + | Chr1:4969862-4969881 | None:intergenic | 35.0% | |
| AGAATTGTTTCATCAATCCG+AGG | - | Chr1:4971560-4971579 | MsG0180000366.01.T01:intron | 35.0% | |
| AGTGGATGAAACAAACTCAA+TGG | - | Chr1:4972045-4972064 | MsG0180000366.01.T01:intron | 35.0% | |
| AGTTGTAAATCCCTTGCATT+AGG | - | Chr1:4969974-4969993 | MsG0180000366.01.T01:three_prime_UTR | 35.0% | |
| CTATCCTACATGTTATACTC+TGG | + | Chr1:4970457-4970476 | None:intergenic | 35.0% | |
| CTGCAGTATGATCTTAATGA+AGG | + | Chr1:4971965-4971984 | None:intergenic | 35.0% | |
| GACAGGAGAATGATTTGAAA+TGG | - | Chr1:4971674-4971693 | MsG0180000366.01.T01:intron | 35.0% | |
| TAAATTGTAGGACCTGAAAG+TGG | + | Chr1:4971032-4971051 | None:intergenic | 35.0% | |
| TAAGCCAGAGTATAACATGT+AGG | - | Chr1:4970450-4970469 | MsG0180000366.01.T01:CDS | 35.0% | |
| TGTGTCATCTTGAAAACACA+TGG | - | Chr1:4970979-4970998 | MsG0180000366.01.T01:intron | 35.0% | |
| TGTTTCATCCACTTGAACAA+GGG | + | Chr1:4972038-4972057 | None:intergenic | 35.0% | |
| TTCCTTCAACTTCCAAGTTT+CGG | - | Chr1:4969847-4969866 | MsG0180000366.01.T01:three_prime_UTR | 35.0% | |
| TTGTTTCATCCACTTGAACA+AGG | + | Chr1:4972039-4972058 | None:intergenic | 35.0% | |
| ! | TGATGCAGTTACTTTGGTAT+TGG | - | Chr1:4971800-4971819 | MsG0180000366.01.T01:intron | 35.0% |
| !! | ACGTGTTTTAAACCCTTTGT+CGG | - | Chr1:4970703-4970722 | MsG0180000366.01.T01:CDS | 35.0% |
| AAACAGGGTTTATGTGTCCT+GGG | - | Chr1:4970408-4970427 | MsG0180000366.01.T01:CDS | 40.0% | |
| AGATGAAGTTCATGTCAGCT+TGG | + | Chr1:4971922-4971941 | None:intergenic | 40.0% | |
| ATGTAACCATAGATTAGCGG+CGG | - | Chr1:4972089-4972108 | MsG0180000366.01.T01:intron | 40.0% | |
| CAAATCATTCTCCTGTCAAG+TGG | + | Chr1:4971671-4971690 | None:intergenic | 40.0% | |
| CAATCAGACACCTAATGCAA+GGG | + | Chr1:4969987-4970006 | None:intergenic | 40.0% | |
| CACCACTCCATAGAAACATT+CGG | + | Chr1:4970551-4970570 | None:intergenic | 40.0% | |
| CACCGATGCTTTAATTGAAG+TGG | + | Chr1:4971244-4971263 | None:intergenic | 40.0% | |
| CAGAAAATGAACACTCCTTC+CGG | - | Chr1:4971853-4971872 | MsG0180000366.01.T01:intron | 40.0% | |
| CGAGAATTAATCATTCCCGT+TGG | - | Chr1:4971489-4971508 | MsG0180000366.01.T01:intron | 40.0% | |
| CTCCAAGGAAATTCTTGAAC+CGG | + | Chr1:4971345-4971364 | None:intergenic | 40.0% | |
| CTGAGCATTTACGGAAATGA+CGG | + | Chr1:4971185-4971204 | None:intergenic | 40.0% | |
| GTATGTTGAGCATTTCTCCA+AGG | + | Chr1:4971360-4971379 | None:intergenic | 40.0% | |
| TCCAAGGAAATTCTTGAACC+GGG | + | Chr1:4971344-4971363 | None:intergenic | 40.0% | |
| TCCTTCAACTTCCAAGTTTC+GGG | - | Chr1:4969848-4969867 | MsG0180000366.01.T01:three_prime_UTR | 40.0% | |
| TGGTCAAGTTTATGTCGACA+TGG | - | Chr1:4971728-4971747 | MsG0180000366.01.T01:intron | 40.0% | |
| TTACGGTGACATGCTAGAAT+TGG | - | Chr1:4970658-4970677 | MsG0180000366.01.T01:CDS | 40.0% | |
| ! | AACCGAATGTTTCTATGGAG+TGG | - | Chr1:4970546-4970565 | MsG0180000366.01.T01:CDS | 40.0% |
| ! | ATTTACGGAAATGACGGAGT+TGG | + | Chr1:4971179-4971198 | None:intergenic | 40.0% |
| ! | CACTGAACCGAATGTTTCTA+TGG | - | Chr1:4970541-4970560 | MsG0180000366.01.T01:CDS | 40.0% |
| ! | CTTGTGTGGTATTTTCGTGT+TGG | - | Chr1:4971708-4971727 | MsG0180000366.01.T01:intron | 40.0% |
| ! | CTTTTGCATGTTGCAAATGG+TGG | - | Chr1:4971775-4971794 | MsG0180000366.01.T01:intron | 40.0% |
| ! | GATTTGAAATGGCGTCGTTT+GGG | - | Chr1:4971685-4971704 | MsG0180000366.01.T01:intron | 40.0% |
| ! | TGATTTGAAATGGCGTCGTT+TGG | - | Chr1:4971684-4971703 | MsG0180000366.01.T01:intron | 40.0% |
| !! | AAGATAGCGTCGACATCTTT+AGG | + | Chr1:4969818-4969837 | None:intergenic | 40.0% |
| !! | CAAAGAAGCATTACCAATCC+CGG | - | Chr1:4971323-4971342 | MsG0180000366.01.T01:intron | 40.0% |
| !! | CACTTCAATTAAAGCATCGG+TGG | - | Chr1:4971242-4971261 | MsG0180000366.01.T01:intron | 40.0% |
| AATGAACACTCCTTCCGGTT+TGG | - | Chr1:4971858-4971877 | MsG0180000366.01.T01:intron | 45.0% | |
| ACATGCAAAAGAAACACCCC+TGG | + | Chr1:4971766-4971785 | None:intergenic | 45.0% | |
| ACATGGTTCACAACACAACC+AGG | - | Chr1:4971745-4971764 | MsG0180000366.01.T01:intron | 45.0% | |
| ACCCGAAACTTGGAAGTTGA+AGG | + | Chr1:4969852-4969871 | None:intergenic | 45.0% | |
| ACTACATCTTCTTGCGCAAG+AGG | - | Chr1:4971392-4971411 | MsG0180000366.01.T01:intron | 45.0% | |
| ATCTTCGTGGTGCCTATGTA+TGG | - | Chr1:4970775-4970794 | MsG0180000366.01.T01:CDS | 45.0% | |
| ATGGTTCACAACACAACCAG+GGG | - | Chr1:4971747-4971766 | MsG0180000366.01.T01:intron | 45.0% | |
| CAAACAGGGTTTATGTGTCC+TGG | - | Chr1:4970407-4970426 | MsG0180000366.01.T01:CDS | 45.0% | |
| CAGGACACATAAACCCTGTT+TGG | + | Chr1:4970409-4970428 | None:intergenic | 45.0% | |
| CATGATATAGAAGCAAGCCC+AGG | + | Chr1:4970428-4970447 | None:intergenic | 45.0% | |
| CATGGTTCACAACACAACCA+GGG | - | Chr1:4971746-4971765 | MsG0180000366.01.T01:intron | 45.0% | |
| CCAATCAGACACCTAATGCA+AGG | + | Chr1:4969988-4970007 | None:intergenic | 45.0% | |
| CCTTCAAGAAATCAGCCACA+AGG | + | Chr1:4971530-4971549 | None:intergenic | 45.0% | |
| CCTTGCATTAGGTGTCTGAT+TGG | - | Chr1:4969985-4970004 | MsG0180000366.01.T01:three_prime_UTR | 45.0% | |
| CTTGCGCAAGAAGATGTAGT+CGG | + | Chr1:4971392-4971411 | None:intergenic | 45.0% | |
| GGAAATTCTTGAACCGGGAT+TGG | + | Chr1:4971339-4971358 | None:intergenic | 45.0% | |
| GGCAAGTCATGTGTTTGCAA+TGG | - | Chr1:4970724-4970743 | MsG0180000366.01.T01:CDS | 45.0% | |
| GTGCAAGTGATTCCACTTTC+AGG | - | Chr1:4971017-4971036 | MsG0180000366.01.T01:intron | 45.0% | |
| TCCCGGTTCAAGAATTTCCT+TGG | - | Chr1:4971340-4971359 | MsG0180000366.01.T01:intron | 45.0% | |
| ! | AACACATGACTTGCCGACAA+AGG | + | Chr1:4970719-4970738 | None:intergenic | 45.0% |
| ! | ACACATGACTTGCCGACAAA+GGG | + | Chr1:4970718-4970737 | None:intergenic | 45.0% |
| ! | CCTTGTGGCTGATTTCTTGA+AGG | - | Chr1:4971527-4971546 | MsG0180000366.01.T01:intron | 45.0% |
| ! | CGAATGTTTCTATGGAGTGG+TGG | - | Chr1:4970549-4970568 | MsG0180000366.01.T01:CDS | 45.0% |
| ! | GTGGACTGATGCAGTTACTT+TGG | - | Chr1:4971794-4971813 | MsG0180000366.01.T01:intron | 45.0% |
| ACACCAACAAAGAGGCCAAC+GGG | + | Chr1:4971507-4971526 | None:intergenic | 50.0% | |
| ATCCATCGATGCCTCCAAAC+CGG | + | Chr1:4971875-4971894 | None:intergenic | 50.0% | |
| CATAAGCCGCCGCTAATCTA+TGG | + | Chr1:4972098-4972117 | None:intergenic | 50.0% | |
| CCACAAGGACACCAACAAAG+AGG | + | Chr1:4971515-4971534 | None:intergenic | 50.0% | |
| GACACCAACAAAGAGGCCAA+CGG | + | Chr1:4971508-4971527 | None:intergenic | 50.0% | |
| ! | ATTCCCGTTGGCCTCTTTGT+TGG | - | Chr1:4971501-4971520 | MsG0180000366.01.T01:intron | 50.0% |
| ! | CCTCTTTGTTGGTGTCCTTG+TGG | - | Chr1:4971512-4971531 | MsG0180000366.01.T01:intron | 50.0% |
| ! | TGACGGAGTTGGCATCGAAA+CGG | + | Chr1:4971168-4971187 | None:intergenic | 50.0% |
| !! | TTGCGCAAGAGGCATTGAAG+TGG | - | Chr1:4971403-4971422 | MsG0180000366.01.T01:intron | 50.0% |
| ATCGATGCCTCCAAACCGGA+AGG | + | Chr1:4971871-4971890 | None:intergenic | 55.0% | |
| !! | GAACACTCCTTCCGGTTTGG+AGG | - | Chr1:4971861-4971880 | MsG0180000366.01.T01:intron | 55.0% |
| !! | TTCCGGTTTGGAGGCATCGA+TGG | - | Chr1:4971870-4971889 | MsG0180000366.01.T01:intron | 55.0% |
| TGGCGTCGTTTGGGCTTGTG+TGG | - | Chr1:4971694-4971713 | MsG0180000366.01.T01:intron | 60.0% | |
| ! | CTCGTGGGCTGCCACTTGAC+AGG | - | Chr1:4971657-4971676 | MsG0180000366.01.T01:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 4969774 | 4972205 | 4969774 | ID=MsG0180000366.01;Name=MsG0180000366.01 |
| Chr1 | mRNA | 4969774 | 4972205 | 4969774 | ID=MsG0180000366.01.T01;Parent=MsG0180000366.01;Name=MsG0180000366.01.T01;_AED=0.27;_eAED=0.34;_QI=48|0.5|0.66|1|0.5|0.33|3|305|270 |
| Chr1 | exon | 4972110 | 4972205 | 4972110 | ID=MsG0180000366.01.T01:exon:9212;Parent=MsG0180000366.01.T01 |
| Chr1 | exon | 4970398 | 4970940 | 4970398 | ID=MsG0180000366.01.T01:exon:9213;Parent=MsG0180000366.01.T01 |
| Chr1 | exon | 4969774 | 4970300 | 4969774 | ID=MsG0180000366.01.T01:exon:9214;Parent=MsG0180000366.01.T01 |
| Chr1 | five_prime_UTR | 4972158 | 4972205 | 4972158 | ID=MsG0180000366.01.T01:five_prime_utr;Parent=MsG0180000366.01.T01 |
| Chr1 | CDS | 4972110 | 4972157 | 4972110 | ID=MsG0180000366.01.T01:cds;Parent=MsG0180000366.01.T01 |
| Chr1 | CDS | 4970398 | 4970940 | 4970398 | ID=MsG0180000366.01.T01:cds;Parent=MsG0180000366.01.T01 |
| Chr1 | CDS | 4970079 | 4970300 | 4970079 | ID=MsG0180000366.01.T01:cds;Parent=MsG0180000366.01.T01 |
| Chr1 | three_prime_UTR | 4969774 | 4970078 | 4969774 | ID=MsG0180000366.01.T01:three_prime_utr;Parent=MsG0180000366.01.T01 |
| Gene Sequence |
| Protein sequence |
