AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580025295.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025295.01.T01 MTR_5g025960 97.674 559 12 1 1 559 1 558 0.0 1127
MsG0580025295.01.T01 MTR_7g065220 46.354 384 195 2 102 474 168 551 6.06e-113 350
MsG0580025295.01.T01 MTR_4g075640 47.383 363 183 3 117 471 86 448 7.06e-112 344
MsG0580025295.01.T01 MTR_3g069590 45.596 386 199 4 114 488 96 481 2.07e-110 342
MsG0580025295.01.T01 MTR_5g081410 45.812 382 196 3 120 490 84 465 8.70e-110 340
MsG0580025295.01.T01 MTR_4g019770 46.832 363 187 2 118 474 96 458 8.00e-107 331
MsG0580025295.01.T01 MTR_2g101830 46.348 356 180 5 118 471 86 432 6.83e-104 323
MsG0580025295.01.T01 MTR_8g030850 44.267 375 184 4 117 471 96 465 3.84e-101 314
MsG0580025295.01.T01 MTR_6g087700 45.730 363 185 6 122 482 100 452 3.86e-101 317
MsG0580025295.01.T01 MTR_3g069590 45.536 336 173 3 114 439 96 431 6.53e-97 302
MsG0580025295.01.T01 MTR_7g077690 39.089 417 186 5 118 471 113 524 3.86e-87 280
MsG0580025295.01.T01 MTR_4g013165 43.182 308 156 6 169 471 1 294 5.50e-80 257
MsG0580025295.01.T01 MTR_5g026140 84.314 51 8 0 156 206 9 59 1.92e-24 98.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025295.01.T01 AT1G31650 61.324 574 190 9 1 547 1 569 0.0 654
MsG0580025295.01.T01 AT1G31650 61.722 546 179 8 27 547 1 541 0.0 623
MsG0580025295.01.T01 AT4G38430 48.077 364 180 3 117 471 89 452 5.80e-113 347
MsG0580025295.01.T01 AT5G05940 45.128 390 199 3 114 488 98 487 8.48e-111 343
MsG0580025295.01.T01 AT5G02010 46.631 371 187 3 117 478 69 437 4.59e-110 339
MsG0580025295.01.T01 AT4G00460 40.795 478 230 11 18 471 18 466 7.94e-105 323
MsG0580025295.01.T01 AT4G00460 40.795 478 230 11 18 471 18 466 7.94e-105 323
MsG0580025295.01.T01 AT3G24620 43.716 366 196 3 115 479 82 438 1.15e-101 317
MsG0580025295.01.T01 AT1G79860 45.658 357 181 6 117 471 91 436 1.46e-101 317
MsG0580025295.01.T01 AT4G13240 45.429 361 187 4 115 474 71 422 5.03e-101 315
MsG0580025295.01.T01 AT1G01700 44.186 387 192 5 99 471 102 478 8.47e-100 311
MsG0580025295.01.T01 AT3G16130 42.119 387 210 5 97 480 71 446 1.30e-96 304
MsG0580025295.01.T01 AT5G05940 44.152 342 179 2 114 443 98 439 1.84e-96 302
MsG0580025295.01.T01 AT1G52240 43.923 362 190 5 114 474 100 449 4.86e-95 300
MsG0580025295.01.T01 AT1G01700 38.511 470 221 8 54 471 55 508 2.67e-93 295
MsG0580025295.01.T01 AT3G55660 42.975 363 198 4 115 468 104 466 2.59e-92 295
MsG0580025295.01.T01 AT5G19560 44.044 361 192 4 115 473 41 393 5.81e-90 286
MsG0580025295.01.T01 AT5G19560 44.044 361 192 4 115 473 41 393 5.81e-90 286
MsG0580025295.01.T01 AT5G19560 44.044 361 192 4 115 473 60 412 1.14e-89 285
MsG0580025295.01.T01 AT2G45890 41.711 374 193 5 115 471 90 455 4.04e-87 277
MsG0580025295.01.T01 AT1G01700 42.857 364 177 7 99 441 102 455 1.63e-84 270
MsG0580025295.01.T01 AT4G00460 42.814 334 166 5 155 471 8 333 1.26e-82 261
MsG0580025295.01.T01 AT3G55660 41.317 334 187 4 115 439 104 437 5.48e-81 261
MsG0580025295.01.T01 AT5G19560 42.508 327 178 4 115 439 60 378 7.45e-76 245
MsG0580025295.01.T01 AT4G00460 41.486 323 151 7 18 323 18 319 1.17e-67 223
MsG0580025295.01.T01 AT1G01700 42.361 288 137 4 54 323 55 331 1.07e-64 216
MsG0580025295.01.T01 AT1G01700 42.361 288 137 4 54 323 55 331 1.07e-64 216
MsG0580025295.01.T01 AT5G19560 40.449 267 149 4 209 473 5 263 8.73e-52 181

Find 114 sgRNAs with CRISPR-Local

Find 488 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACAGCTTCCAATTTATTAA+TGG 0.226323 5:+16607658 None:intergenic
CCTTGAGACCATTAATAAAT+TGG 0.239944 5:-16607666 MsG0580025295.01.T01:CDS
TGATAAACTTGAGTTATTAT+TGG 0.246352 5:-16607540 MsG0580025295.01.T01:CDS
TTGACAGCTGAATCAACTTC+TGG 0.292107 5:-16607734 MsG0580025295.01.T01:CDS
TCAGGAATTATGACATATAA+TGG 0.295381 5:-16609702 MsG0580025295.01.T01:intron
TTGTTATCTCTGTAGGATAT+TGG 0.303057 5:-16607203 MsG0580025295.01.T01:intron
GAAGCGTATTCCAGAGTTCT+TGG 0.321753 5:-16607167 MsG0580025295.01.T01:CDS
AAGAAAGAGGTTGGTTCATC+AGG 0.325300 5:-16608177 MsG0580025295.01.T01:CDS
AAGAAATGTTTGAGGAAGAT+TGG 0.333774 5:+16607475 None:intergenic
ATTTGGCAGCCTTGAATACT+TGG 0.340330 5:+16608141 None:intergenic
CTGCATAACAATGCAATCTA+AGG 0.341741 5:-16615708 MsG0580025295.01.T01:intron
CTCTTTCTTTCTTCAGATAG+AGG 0.341999 5:+16608789 None:intergenic
TCAGAGATATTATTTATTCC+AGG 0.347750 5:+16607059 None:intergenic
TTACTTGGTGAAGATGTTAC+TGG 0.361690 5:-16609387 MsG0580025295.01.T01:CDS
CAATGGTGAAAACAGAGTTT+TGG 0.364768 5:-16608310 MsG0580025295.01.T01:CDS
GAGCAAATGGCGAAGAGAAA+TGG 0.382512 5:-16608769 MsG0580025295.01.T01:CDS
GTGTAGCTATTATCACATCT+TGG 0.389486 5:+16606919 None:intergenic
GGATATTGGACATTCCATTC+TGG 0.394307 5:-16607189 MsG0580025295.01.T01:CDS
TCTTCAAGCAAAGATGCGTT+TGG 0.398072 5:-16609573 MsG0580025295.01.T01:CDS
CAAAGTGTTTAACAATGAAA+AGG 0.400663 5:-16609539 MsG0580025295.01.T01:CDS
GATGCTGCTAAAGTTCAATA+TGG 0.402749 5:-16607452 MsG0580025295.01.T01:CDS
TAAGCATAGAGTCCAACTTC+TGG 0.406157 5:+16608529 None:intergenic
CACACTCATGTCTTTCCCTT+CGG 0.412875 5:+16608265 None:intergenic
TGTAGCTATTATCACATCTT+GGG 0.415683 5:+16606920 None:intergenic
TGTTTAGAATGCAACTTTCA+AGG 0.431869 5:+16609679 None:intergenic
TGAATGTCTGCACGAGCTTT+AGG 0.436123 5:+16608570 None:intergenic
TAGCTTCAATATCTGAATGT+TGG 0.436489 5:+16609433 None:intergenic
AATCACCGGTTCGAACTTCA+TGG 0.438603 5:-16607592 MsG0580025295.01.T01:CDS
AGAAATGTTTGAGGAAGATT+GGG 0.439291 5:+16607476 None:intergenic
AGAACTATGGAACAAGTTAC+TGG 0.440000 5:-16607617 MsG0580025295.01.T01:CDS
ACTGTCTCCTACAAACTATA+TGG 0.440626 5:-16608739 MsG0580025295.01.T01:CDS
ATGAACAAGGACTTGAAGAA+TGG 0.447540 5:-16609512 MsG0580025295.01.T01:CDS
AGTTTATCAGCTTCTGACAT+AGG 0.450031 5:+16607554 None:intergenic
AGCTCAACCATATAGTTTGT+AGG 0.458810 5:+16608732 None:intergenic
AGATGTTACTGGAGGAACTA+AGG 0.464313 5:-16609376 MsG0580025295.01.T01:CDS
CTGAAGAAAGAAAGAGCAAA+TGG 0.467672 5:-16608782 MsG0580025295.01.T01:CDS
GGTCTCAAGGGCCATATGTT+CGG 0.469228 5:+16607679 None:intergenic
TTCAGATATTGAAGCTATGA+AGG 0.469502 5:-16609427 MsG0580025295.01.T01:CDS
AAAGTGTTTAACAATGAAAA+GGG 0.471202 5:-16609538 MsG0580025295.01.T01:CDS
TAAGGGCATCACTACAGCTT+TGG 0.471817 5:-16609358 MsG0580025295.01.T01:CDS
AACTCACTAAGTTGCTCCCC+TGG 0.474068 5:-16607077 MsG0580025295.01.T01:CDS
CAATTTGAAATCCGAACATA+TGG 0.474139 5:-16607690 MsG0580025295.01.T01:CDS
AATGCCATCACAAACTTGTC+AGG 0.477719 5:-16609327 MsG0580025295.01.T01:intron
GAGTCCAACTTCTGGAGTGC+TGG 0.477913 5:+16608537 None:intergenic
TGAACAAGGACTTGAAGAAT+GGG 0.481493 5:-16609511 MsG0580025295.01.T01:CDS
TCTTCCAGCACTCCAGAAGT+TGG 0.489929 5:-16608541 MsG0580025295.01.T01:CDS
GGCTAAATTTCCAAGAACTC+TGG 0.491194 5:+16607157 None:intergenic
GGTGGTACGCCAAGTATTCA+AGG 0.491614 5:-16608150 MsG0580025295.01.T01:CDS
CCAATTTATTAATGGTCTCA+AGG 0.492231 5:+16607666 None:intergenic
GAGATGTTTAGAATGAAGAA+AGG 0.494814 5:-16614215 MsG0580025295.01.T01:CDS
AGCAGAACAAGTAGAGGAGA+CGG 0.494848 5:-16609636 MsG0580025295.01.T01:CDS
TAAATAATATCTCTGAAACT+TGG 0.499561 5:-16607052 MsG0580025295.01.T01:CDS
GTTTATCAGCTTCTGACATA+GGG 0.501172 5:+16607555 None:intergenic
TGCCAATGGTAGAATCTTTG+AGG 0.504782 5:-16608688 MsG0580025295.01.T01:intron
GAGGGAGGAAGCAGGACCGA+AGG 0.507585 5:-16608281 MsG0580025295.01.T01:CDS
ACAGGATGCACTTGATTCAA+TGG 0.509215 5:-16608327 MsG0580025295.01.T01:intron
CCTTGTGCAGTTCTTGTCCA+AGG 0.510155 5:+16607759 None:intergenic
GCAGCATCAAGAAATGTTTG+AGG 0.512844 5:+16607467 None:intergenic
CAATTTATTAATGGTCTCAA+GGG 0.515889 5:+16607667 None:intergenic
CAGAGATATTATTTATTCCA+GGG 0.516460 5:+16607060 None:intergenic
ATCATCGTCATCAAATGAAT+CGG 0.519579 5:+16609605 None:intergenic
CTCGTTGAAAGAGAGAACTA+TGG 0.524461 5:-16607630 MsG0580025295.01.T01:CDS
CACCAAGCAGGAGTAGTGTC+TGG 0.526331 5:-16606899 MsG0580025295.01.T01:CDS
AAAGTATGGACTTACTCTCT+TGG 0.527670 5:+16614144 None:intergenic
GACTAGCTTGCTGCAGCAGA+GGG 0.530037 5:-16614193 MsG0580025295.01.T01:CDS
TGATACCGCAAGAAAGAGGT+TGG 0.530544 5:-16608186 MsG0580025295.01.T01:CDS
TACCTCAAAGATTCTACCAT+TGG 0.531632 5:+16608686 None:intergenic
TTCAGCATATTGTCTAGAAT+AGG 0.545508 5:-16607134 MsG0580025295.01.T01:CDS
CACCAGACACTACTCCTGCT+TGG 0.546870 5:+16606897 None:intergenic
AAAGACCATGAAGTTCGAAC+CGG 0.547808 5:+16607587 None:intergenic
TCTGGAATACGCTTCCAGAA+TGG 0.548749 5:+16607175 None:intergenic
TAATATCTCTGAAACTTGGA+TGG 0.549387 5:-16607048 MsG0580025295.01.T01:CDS
GAATGTTGGATTGCATAAGA+AGG 0.550363 5:+16609447 None:intergenic
AAACAATCAGTCTTATGAAG+AGG 0.554003 5:-16609661 MsG0580025295.01.T01:CDS
TTCTATGTTGCAGTCTGGAA+AGG 0.559632 5:-16607786 MsG0580025295.01.T01:intron
AGAGATATTATTTATTCCAG+GGG 0.565546 5:+16607061 None:intergenic
TATTAGAGATGCACTTGCAA+AGG 0.565718 5:-16608075 MsG0580025295.01.T01:intron
AGTGCATCTCTAATAACTGT+TGG 0.565972 5:+16608083 None:intergenic
GATGTTACTGGAGGAACTAA+GGG 0.566443 5:-16609375 MsG0580025295.01.T01:CDS
AGAAAGAGGTTGGTTCATCA+GGG 0.566470 5:-16608176 MsG0580025295.01.T01:CDS
AGGGAGGAAGCAGGACCGAA+GGG 0.567526 5:-16608280 MsG0580025295.01.T01:CDS
TTATGCAGTGAAAAGTTCAA+TGG 0.568269 5:+16615723 None:intergenic
TTTCTGATACCGCAAGAAAG+AGG 0.568553 5:-16608190 MsG0580025295.01.T01:CDS
TGATAATAGCTACACCAAGC+AGG 0.570801 5:-16606911 MsG0580025295.01.T01:CDS
GTTCTTTATTGACAATGAAG+AGG 0.574025 5:-16606710 MsG0580025295.01.T01:three_prime_UTR
CAAAAGATGAACAAAGCAGA+TGG 0.584707 5:-16606996 MsG0580025295.01.T01:CDS
GGTATGGTGAGGGAGGAAGC+AGG 0.588600 5:-16608289 MsG0580025295.01.T01:CDS
CAGTCTGGAAAGGCAAACCT+TGG 0.594632 5:-16607776 MsG0580025295.01.T01:CDS
ACAAGTTACTGGCAAATCAC+CGG 0.594634 5:-16607606 MsG0580025295.01.T01:CDS
GAGGAAAGCAGAACAAGTAG+AGG 0.594944 5:-16609642 MsG0580025295.01.T01:CDS
GGACTAGCTTGCTGCAGCAG+AGG 0.599307 5:-16614194 MsG0580025295.01.T01:CDS
TGCTAAAGTTCAATATGGCA+AGG 0.601273 5:-16607447 MsG0580025295.01.T01:intron
TCTCTAATAACTGTTGGCAC+AGG 0.604103 5:+16608089 None:intergenic
AATAGGAGATATATTACAAG+AGG 0.605594 5:-16607117 MsG0580025295.01.T01:CDS
TATTCTAGACAATATGCTGA+AGG 0.609235 5:+16607136 None:intergenic
GAGGTTGGTTCATCAGGGAA+AGG 0.610824 5:-16608171 MsG0580025295.01.T01:CDS
TATCTCTGAAACTTGGATGG+TGG 0.612314 5:-16607045 MsG0580025295.01.T01:CDS
ATGAACCAACCTCTTTCTTG+CGG 0.616377 5:+16608181 None:intergenic
CCTTGGACAAGAACTGCACA+AGG 0.620947 5:-16607759 MsG0580025295.01.T01:CDS
AATGGCGAAGAGAAATGGAC+TGG 0.621786 5:-16608764 MsG0580025295.01.T01:CDS
CAAGCTTAAGCATATAGCAA+TGG 0.623474 5:+16615752 None:intergenic
TCACTTTAACAAATGTACTG+TGG 0.626144 5:+16614240 None:intergenic
GCTAAGCAAAACAATGCCAA+TGG 0.628095 5:-16608702 MsG0580025295.01.T01:CDS
AGTGAAAAGTTCAATGGTGA+TGG 0.637154 5:+16615729 None:intergenic
GTTGGTTCATCAGGGAAAGG+TGG 0.638880 5:-16608168 MsG0580025295.01.T01:CDS
CATACCTGACAAGTTTGTGA+TGG 0.644339 5:+16609323 None:intergenic
TGTCTGGTGCATTAGTAGAG+AGG 0.658828 5:-16606883 MsG0580025295.01.T01:CDS
CTTGGTGAAGATGTTACTGG+AGG 0.664082 5:-16609384 MsG0580025295.01.T01:CDS
AGAACAAGTAGAGGAGACGG+AGG 0.669728 5:-16609633 MsG0580025295.01.T01:CDS
ATGAAAAGGGAAGATGAACA+AGG 0.671938 5:-16609525 MsG0580025295.01.T01:CDS
GTGTGCGGCATAGTAAAAGA+TGG 0.678764 5:-16608247 MsG0580025295.01.T01:CDS
TGCGGCATAGTAAAAGATGG+TGG 0.684737 5:-16608244 MsG0580025295.01.T01:CDS
AAGGGAAAGACATGAGTGTG+CGG 0.684788 5:-16608262 MsG0580025295.01.T01:CDS
GCTGTAAAAGTGTTTCAGCA+CGG 0.690145 5:+16607516 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTATAATTCTTTGATAA+CGG - Chr5:16609111-16609130 MsG0580025295.01.T01:intron 10.0%
!! AAATTTGTAATATTAAAATG+TGG + Chr5:16610783-16610802 None:intergenic 10.0%
!! AAGAAAAATATATGTATAAT+TGG + Chr5:16609945-16609964 None:intergenic 10.0%
!! AAGTAATAAAATTCATAAAA+AGG + Chr5:16611396-16611415 None:intergenic 10.0%
!! AATTTGTAATATTAAAATGT+GGG + Chr5:16610782-16610801 None:intergenic 10.0%
!! ATAGATTATATACAATTATA+GGG + Chr5:16612079-16612098 None:intergenic 10.0%
!! TAAATATTAAATAAATTCCA+TGG + Chr5:16609580-16609599 None:intergenic 10.0%
!! TAATAAATATTTACCATTTA+TGG + Chr5:16612020-16612039 None:intergenic 10.0%
!! TATAGATTATATACAATTAT+AGG + Chr5:16612080-16612099 None:intergenic 10.0%
!! TATATAATCTATAATCTATA+AGG - Chr5:16612087-16612106 MsG0580025295.01.T01:intron 10.0%
!! TTTATAAATAAATTCATAGA+CGG + Chr5:16607166-16607185 None:intergenic 10.0%
!!! AATTTTTATTTATTATCGTT+TGG - Chr5:16609622-16609641 MsG0580025295.01.T01:CDS 10.0%
!!! TTTAATATTTAAGTTTACTA+TGG - Chr5:16609589-16609608 MsG0580025295.01.T01:CDS 10.0%
!!! TTTTATTTTAATTTCATGTT+TGG + Chr5:16611915-16611934 None:intergenic 10.0%
!! AACTTTAATCAAAATATGAT+TGG + Chr5:16607194-16607213 None:intergenic 15.0%
!! ATTACAAATTTCTTACTATT+TGG - Chr5:16610792-16610811 MsG0580025295.01.T01:intron 15.0%
!! ATTATCATTATCAAAAACAA+AGG + Chr5:16610641-16610660 None:intergenic 15.0%
!! TATCATTTCTCTATTAATTT+AGG - Chr5:16607699-16607718 MsG0580025295.01.T01:CDS 15.0%
!! TCAGATATAAAAAAAATCTA+TGG + Chr5:16615688-16615707 None:intergenic 15.0%
!! TTAAATTTAAGTAACCAAAA+CGG + Chr5:16609869-16609888 None:intergenic 15.0%
!! TTATAAATAAATTCATAGAC+GGG + Chr5:16607165-16607184 None:intergenic 15.0%
!! TTTCTTTCTTTCTAATTATT+AGG - Chr5:16610899-16610918 MsG0580025295.01.T01:intron 15.0%
!!! AAATATTTATGTTTTCCAAA+AGG + Chr5:16612770-16612789 None:intergenic 15.0%
!!! AATATTTATGTTTTCCAAAA+GGG + Chr5:16612769-16612788 None:intergenic 15.0%
!!! ACTTTAATGTTTTTTTTTCT+GGG + Chr5:16611692-16611711 None:intergenic 15.0%
!!! ATTCATTTCTATTTTTCTTT+CGG - Chr5:16613627-16613646 MsG0580025295.01.T01:intron 15.0%
!!! ATTTTAAAGTCAATTTGTTA+TGG + Chr5:16609710-16609729 None:intergenic 15.0%
!!! ATTTTGATCTTTTCATAAAA+AGG + Chr5:16611618-16611637 None:intergenic 15.0%
!!! GTTTTGTTATTTCATAAATT+TGG + Chr5:16610026-16610045 None:intergenic 15.0%
!!! TAATTTTATAATGAGACTTT+GGG - Chr5:16607729-16607748 MsG0580025295.01.T01:CDS 15.0%
!!! TACATATATTTTTCTTACAA+TGG - Chr5:16609949-16609968 MsG0580025295.01.T01:intron 15.0%
!!! TATTTAAAACCATATTACTT+TGG + Chr5:16612532-16612551 None:intergenic 15.0%
!! AAAAAAATGTCGAAATAACT+AGG - Chr5:16608809-16608828 MsG0580025295.01.T01:CDS 20.0%
!! AAATTTCTTACTATTTGGAT+AGG - Chr5:16610797-16610816 MsG0580025295.01.T01:intron 20.0%
!! AAGTCTCATTATAAAATTAC+AGG + Chr5:16607728-16607747 None:intergenic 20.0%
!! AATAAGAAGTGAAAAAAACA+AGG + Chr5:16607575-16607594 None:intergenic 20.0%
!! AATCACATATTAAGTGTATA+CGG + Chr5:16614530-16614549 None:intergenic 20.0%
!! AGATCAAATAAAAAAGAGAA+AGG + Chr5:16606957-16606976 None:intergenic 20.0%
!! AGGATAATTAAAACAAACTA+TGG + Chr5:16608492-16608511 None:intergenic 20.0%
!! ATTATGTAACCAAAGTAATA+TGG - Chr5:16612520-16612539 MsG0580025295.01.T01:intron 20.0%
!! CAGAAAAAAAAACATTAAAG+TGG - Chr5:16611691-16611710 MsG0580025295.01.T01:intron 20.0%
!! GACATAGTTTAATAAAAGTA+TGG + Chr5:16608389-16608408 None:intergenic 20.0%
!! GTTAACTATTTGATTCTTAT+GGG - Chr5:16607245-16607264 MsG0580025295.01.T01:intron 20.0%
!! TAAATTATTTGCATTGCTAT+TGG + Chr5:16612440-16612459 None:intergenic 20.0%
!! TAATAAATTCCTATGTACTT+AGG + Chr5:16611042-16611061 None:intergenic 20.0%
!! TATACACTTAATATGTGATT+TGG - Chr5:16614530-16614549 MsG0580025295.01.T01:intron 20.0%
!! TCTAATTATTGAATGAACAA+AGG + Chr5:16611249-16611268 None:intergenic 20.0%
!! TGATAAACTTGAGTTATTAT+TGG - Chr5:16614976-16614995 MsG0580025295.01.T01:intron 20.0%
!! TGTTAACTATTTGATTCTTA+TGG - Chr5:16607244-16607263 MsG0580025295.01.T01:intron 20.0%
!! TTAAAATAGAGAAGATTTCA+GGG - Chr5:16609911-16609930 MsG0580025295.01.T01:intron 20.0%
!! TTCATAAAAAGGTAAACAAA+GGG + Chr5:16611607-16611626 None:intergenic 20.0%
!! TTGATTAAAGTTCTTAGAAT+GGG - Chr5:16607202-16607221 MsG0580025295.01.T01:intron 20.0%
!! TTTCATAAAAAGGTAAACAA+AGG + Chr5:16611608-16611627 None:intergenic 20.0%
!! TTTGATTAAAGTTCTTAGAA+TGG - Chr5:16607201-16607220 MsG0580025295.01.T01:intron 20.0%
!! TTTGTCTCATATAAAATGTA+AGG - Chr5:16610998-16611017 MsG0580025295.01.T01:intron 20.0%
!!! AAAATTCAAAACACAACTTT+TGG - Chr5:16608730-16608749 MsG0580025295.01.T01:CDS 20.0%
!!! AAAGTGTTTAACAATGAAAA+GGG - Chr5:16612978-16612997 MsG0580025295.01.T01:intron 20.0%
!!! AAATAAGAAAGTTTTGTTCT+TGG - Chr5:16613909-16613928 MsG0580025295.01.T01:intron 20.0%
!!! AAATTAACATGATTCGTTTT+AGG - Chr5:16613370-16613389 MsG0580025295.01.T01:intron 20.0%
!!! AAATTTAGCTATTCTAAGAA+AGG - Chr5:16614064-16614083 MsG0580025295.01.T01:intron 20.0%
!!! AAGTTTTTCAAAAGTAAATG+AGG + Chr5:16606988-16607007 None:intergenic 20.0%
!!! AATATATTCTTGCATTGTTT+TGG - Chr5:16612627-16612646 MsG0580025295.01.T01:intron 20.0%
!!! AATATTTTACTGTAGAGATT+TGG - Chr5:16609210-16609229 MsG0580025295.01.T01:intron 20.0%
!!! AATCATGTTAATTTTAGACT+AGG + Chr5:16613364-16613383 None:intergenic 20.0%
!!! AGTTGATACAAACTTTTATA+CGG + Chr5:16612341-16612360 None:intergenic 20.0%
!!! ATAGTTTACTTTTTCTTAAC+TGG + Chr5:16613868-16613887 None:intergenic 20.0%
!!! ATATTTATGTTTTCCAAAAG+GGG + Chr5:16612768-16612787 None:intergenic 20.0%
!!! CAATAATACCATATTTTTGA+AGG - Chr5:16610674-16610693 MsG0580025295.01.T01:intron 20.0%
!!! CACTTTAATGTTTTTTTTTC+TGG + Chr5:16611693-16611712 None:intergenic 20.0%
!!! GATCGTTAATTTATTAGTTT+AGG - Chr5:16611559-16611578 MsG0580025295.01.T01:intron 20.0%
!!! GGTTACTTAAATTTAAAGTA+AGG - Chr5:16609873-16609892 MsG0580025295.01.T01:intron 20.0%
!!! GTAATTTTATAATGAGACTT+TGG - Chr5:16607728-16607747 MsG0580025295.01.T01:CDS 20.0%
!!! GTTTTTGATAATGATAATGA+AGG - Chr5:16610643-16610662 MsG0580025295.01.T01:intron 20.0%
!!! TAAATAATATCTCTGAAACT+TGG - Chr5:16615464-16615483 MsG0580025295.01.T01:intron 20.0%
!!! TAGTTTGTTTTAATTATCCT+AGG - Chr5:16608492-16608511 MsG0580025295.01.T01:intron 20.0%
!!! TCTAGCATACATTTTTATAA+AGG - Chr5:16612117-16612136 MsG0580025295.01.T01:intron 20.0%
!!! TGACACTTTAAAAAAGATAA+AGG - Chr5:16613558-16613577 MsG0580025295.01.T01:intron 20.0%
!!! TTATTTCGACATTTTTTTGT+CGG + Chr5:16608807-16608826 None:intergenic 20.0%
!!! TTGTTTTTTTCACTTCTTAT+TGG - Chr5:16607574-16607593 MsG0580025295.01.T01:CDS 20.0%
!!! TTTAAAATAGAGAAGATTTC+AGG - Chr5:16609910-16609929 MsG0580025295.01.T01:intron 20.0%
!!! TTTTTTATACTGAAAGTTGA+TGG - Chr5:16606897-16606916 MsG0580025295.01.T01:CDS 20.0%
! AAACACATTGTAATTGCATT+TGG - Chr5:16608607-16608626 MsG0580025295.01.T01:intron 25.0%
! AAATGGTATAAGTTGTTCAT+AGG - Chr5:16609028-16609047 MsG0580025295.01.T01:intron 25.0%
! AACACATTGTAATTGCATTT+GGG - Chr5:16608608-16608627 MsG0580025295.01.T01:intron 25.0%
! AACAGCTTCCAATTTATTAA+TGG + Chr5:16614861-16614880 None:intergenic 25.0%
! AATAAATGGTTTAGAGAGAT+AGG - Chr5:16607903-16607922 MsG0580025295.01.T01:intron 25.0%
! AATAAATTCTAATGCATCGA+AGG - Chr5:16614497-16614516 MsG0580025295.01.T01:intron 25.0%
! AATAGGAGATATATTACAAG+AGG - Chr5:16615399-16615418 MsG0580025295.01.T01:intron 25.0%
! AGAGATATTATTTATTCCAG+GGG + Chr5:16615458-16615477 None:intergenic 25.0%
! AGGCATAATAAAAACACTAA+TGG + Chr5:16610326-16610345 None:intergenic 25.0%
! ATAAATGTGTCCTACAATAA+AGG + Chr5:16609386-16609405 None:intergenic 25.0%
! ATCTTTACTAGCAACATATT+AGG - Chr5:16614130-16614149 MsG0580025295.01.T01:intron 25.0%
! ATGAACGTTGAATTATACTA+TGG + Chr5:16613462-16613481 None:intergenic 25.0%
! ATTGATCGCTACAAAATTAA+GGG + Chr5:16607975-16607994 None:intergenic 25.0%
! CAATTTATTAATGGTCTCAA+GGG + Chr5:16614852-16614871 None:intergenic 25.0%
! CAGAACAGTAAAAAATATAC+TGG + Chr5:16607062-16607081 None:intergenic 25.0%
! CAGAGATATTATTTATTCCA+GGG + Chr5:16615459-16615478 None:intergenic 25.0%
! CATGTTAAAGATTCCATAAA+TGG - Chr5:16612004-16612023 MsG0580025295.01.T01:intron 25.0%
! CATTTCTCTATTAATTTAGG+TGG - Chr5:16607702-16607721 MsG0580025295.01.T01:CDS 25.0%
! GATCATATAAGTACATAGAT+TGG + Chr5:16613667-16613686 None:intergenic 25.0%
! GTAAATTAGTCCAATTGATA+AGG + Chr5:16610609-16610628 None:intergenic 25.0%
! TAAGCTCTTGACTATTTAAA+AGG - Chr5:16613276-16613295 MsG0580025295.01.T01:intron 25.0%
! TATATGTCATAATTCCTGAA+AGG + Chr5:16612813-16612832 None:intergenic 25.0%
! TATCATGTTAGATGTGATAT+GGG - Chr5:16610185-16610204 MsG0580025295.01.T01:intron 25.0%
! TCAGAGATATTATTTATTCC+AGG + Chr5:16615460-16615479 None:intergenic 25.0%
! TCAGGAATTATGACATATAA+TGG - Chr5:16612814-16612833 MsG0580025295.01.T01:intron 25.0%
! TGACTATTTGATTATAACCT+AGG - Chr5:16614620-16614639 MsG0580025295.01.T01:intron 25.0%
! TGATATACAATGAAATTCCA+TGG - Chr5:16609560-16609579 MsG0580025295.01.T01:CDS 25.0%
! TTCTTATTGGTCAAAAACAA+TGG - Chr5:16607587-16607606 MsG0580025295.01.T01:CDS 25.0%
! TTGACATTCAAAAAAGATAG+TGG - Chr5:16609491-16609510 MsG0580025295.01.T01:CDS 25.0%
! TTGATCATAGTGACTAATAT+GGG + Chr5:16608712-16608731 None:intergenic 25.0%
! TTGATTTATATGAAGCAAGT+AGG - Chr5:16610218-16610237 MsG0580025295.01.T01:intron 25.0%
! TTGGAATTTCTTGTATATGA+GGG - Chr5:16609641-16609660 MsG0580025295.01.T01:CDS 25.0%
! TTGTAATGATATCCACAAAA+AGG - Chr5:16609754-16609773 MsG0580025295.01.T01:intron 25.0%
! TTTAAAAACGTCAACATTGT+TGG - Chr5:16613242-16613261 MsG0580025295.01.T01:intron 25.0%
! TTTAGATGAGAGAGAATAAA+TGG - Chr5:16607889-16607908 MsG0580025295.01.T01:intron 25.0%
! TTTAGTGTCCTTCAAAAATA+TGG + Chr5:16610685-16610704 None:intergenic 25.0%
! TTTGATCATAGTGACTAATA+TGG + Chr5:16608713-16608732 None:intergenic 25.0%
!! AAATTTTCAAAGCTCTTACT+TGG - Chr5:16613114-16613133 MsG0580025295.01.T01:intron 25.0%
!! ACTATGTTCTAGACTATATT+TGG - Chr5:16612708-16612727 MsG0580025295.01.T01:intron 25.0%
!! ACTTTCTTATTTAGTAGCAA+AGG + Chr5:16613901-16613920 None:intergenic 25.0%
!! ATAGAAACAAAGAGTGTATA+TGG - Chr5:16608998-16609017 MsG0580025295.01.T01:intron 25.0%
!! ATTTCGCTAAAAAAGCATAA+GGG + Chr5:16607466-16607485 None:intergenic 25.0%
!! CAAAGATGTTTACTGTTTTA+AGG - Chr5:16610095-16610114 MsG0580025295.01.T01:intron 25.0%
!! CAAAGTGTTTAACAATGAAA+AGG - Chr5:16612977-16612996 MsG0580025295.01.T01:intron 25.0%
!! CACATTTTCATTGATAGATT+TGG + Chr5:16614395-16614414 None:intergenic 25.0%
!! CTTTCTTATTTAGTAGCAAA+GGG + Chr5:16613900-16613919 None:intergenic 25.0%
!! TATTTGGATTATTTGTTGAC+AGG - Chr5:16614171-16614190 MsG0580025295.01.T01:CDS 25.0%
!! TGAACAAAGGTATATTGATT+TGG + Chr5:16611236-16611255 None:intergenic 25.0%
!! TTAATTATCCTAGGTGTTTT+GGG - Chr5:16608501-16608520 MsG0580025295.01.T01:intron 25.0%
!! TTCAATTTTCCTAAGTACAT+AGG - Chr5:16611030-16611049 MsG0580025295.01.T01:intron 25.0%
!! TTGGTTTCTTTAGTTTAGAA+AGG + Chr5:16615164-16615183 None:intergenic 25.0%
!! TTTAATTATCCTAGGTGTTT+TGG - Chr5:16608500-16608519 MsG0580025295.01.T01:intron 25.0%
!! TTTATATAATGGAACCTTTC+AGG - Chr5:16612796-16612815 MsG0580025295.01.T01:intron 25.0%
!! TTTGGAATTTCTTGTATATG+AGG - Chr5:16609640-16609659 MsG0580025295.01.T01:CDS 25.0%
!!! AAATTGGTTTGATTAACTGT+TGG + Chr5:16615235-16615254 None:intergenic 25.0%
!!! AACAAAGGTATATTGATTTG+GGG + Chr5:16611234-16611253 None:intergenic 25.0%
!!! AACAACTTATACCATTTTTG+TGG + Chr5:16609025-16609044 None:intergenic 25.0%
!!! ACAACTTATACCATTTTTGT+GGG + Chr5:16609024-16609043 None:intergenic 25.0%
!!! AGTGTGAAAGTTATTTTCAT+TGG + Chr5:16609826-16609845 None:intergenic 25.0%
!!! CAGTATATTTTTTACTGTTC+TGG - Chr5:16607060-16607079 MsG0580025295.01.T01:CDS 25.0%
!!! CTAGTACTTTTTTTATTGAG+AGG + Chr5:16608779-16608798 None:intergenic 25.0%
!!! CTTAGTTTTATTTGTGTCAA+AGG - Chr5:16612681-16612700 MsG0580025295.01.T01:intron 25.0%
!!! GAACAAAGGTATATTGATTT+GGG + Chr5:16611235-16611254 None:intergenic 25.0%
!!! GTTTAGTCATATGCTATTTT+TGG - Chr5:16612567-16612586 MsG0580025295.01.T01:intron 25.0%
!!! TACTATATTTTGGACATTGT+TGG - Chr5:16608224-16608243 MsG0580025295.01.T01:CDS 25.0%
!!! TACTCACAAAATTTAGTTTG+TGG - Chr5:16610390-16610409 MsG0580025295.01.T01:intron 25.0%
!!! TGTTTTAAGGATGAAAATGA+TGG - Chr5:16610108-16610127 MsG0580025295.01.T01:intron 25.0%
!!! TTAATATGTGATTTGGTTCT+TGG - Chr5:16614537-16614556 MsG0580025295.01.T01:intron 25.0%
!!! TTTGTTCATCTTTTGAAGTA+AGG + Chr5:16615515-16615534 None:intergenic 25.0%
AAAAAGGTAAACAAAGGGAA+AGG + Chr5:16611602-16611621 None:intergenic 30.0%
AAGAAATGTTTGAGGAAGAT+TGG + Chr5:16615044-16615063 None:intergenic 30.0%
AAGAATATATTCTCTGCTGT+TGG + Chr5:16612618-16612637 None:intergenic 30.0%
ACTCAAATTCATGTTGAGAT+AGG - Chr5:16610746-16610765 MsG0580025295.01.T01:intron 30.0%
AGAAATGTTTGAGGAAGATT+GGG + Chr5:16615043-16615062 None:intergenic 30.0%
AGTCAAGAGCTTAGAAAATT+CGG + Chr5:16613269-16613288 None:intergenic 30.0%
ATAGCTCATAGCATATTAGT+CGG - Chr5:16608533-16608552 MsG0580025295.01.T01:CDS 30.0%
ATCATCGTCATCAAATGAAT+CGG + Chr5:16612914-16612933 None:intergenic 30.0%
ATCTGTACTAACGTACTAAT+CGG - Chr5:16611873-16611892 MsG0580025295.01.T01:intron 30.0%
ATGATTCAATAGTAGAGATC+AGG + Chr5:16610528-16610547 None:intergenic 30.0%
ATTATGAGTCATGCTAACTA+AGG - Chr5:16611978-16611997 MsG0580025295.01.T01:intron 30.0%
ATTCATAGACGGGAAAAAAA+AGG + Chr5:16607155-16607174 None:intergenic 30.0%
ATTCTATCACATCTCTATCA+CGG + Chr5:16612383-16612402 None:intergenic 30.0%
ATTTATATGAAGCAAGTAGG+AGG - Chr5:16610221-16610240 MsG0580025295.01.T01:intron 30.0%
ATTTCTTGTATATGAGGGAA+TGG - Chr5:16609646-16609665 MsG0580025295.01.T01:CDS 30.0%
CACATGAAAAGTTGGAAAAA+TGG + Chr5:16608962-16608981 None:intergenic 30.0%
CATATTGATGTACTATTGCT+AGG + Chr5:16612271-16612290 None:intergenic 30.0%
CATTGATCGCTACAAAATTA+AGG + Chr5:16607976-16607995 None:intergenic 30.0%
CCAATTTATTAATGGTCTCA+AGG + Chr5:16614853-16614872 None:intergenic 30.0%
CCTTGAGACCATTAATAAAT+TGG - Chr5:16614850-16614869 MsG0580025295.01.T01:intron 30.0%
CTAATAACCCAAAAACTATG+AGG + Chr5:16615779-16615798 None:intergenic 30.0%
CTATCATGTTAGATGTGATA+TGG - Chr5:16610184-16610203 MsG0580025295.01.T01:intron 30.0%
CTTTAGTGTTTATAAGCTCA+TGG - Chr5:16611729-16611748 MsG0580025295.01.T01:intron 30.0%
GAATCTACCGTATATACATA+CGG + Chr5:16608940-16608959 None:intergenic 30.0%
GATCTCTACTATTGAATCAT+TGG - Chr5:16610528-16610547 MsG0580025295.01.T01:intron 30.0%
GTACGTGAAATTAAATGCTT+AGG - Chr5:16608072-16608091 MsG0580025295.01.T01:intron 30.0%
GTCGAAATTTCATAAAGTGT+GGG - Chr5:16608145-16608164 MsG0580025295.01.T01:CDS 30.0%
GTGGTCTCAACATAAAAAAA+AGG - Chr5:16609510-16609529 MsG0580025295.01.T01:CDS 30.0%
GTTCTTTATTGACAATGAAG+AGG - Chr5:16615806-16615825 MsG0580025295.01.T01:five_prime_UTR 30.0%
GTTGCATAAAACAATAGTGA+AGG + Chr5:16609454-16609473 None:intergenic 30.0%
TAAAGCAAATCACAATCACA+GGG - Chr5:16614656-16614675 MsG0580025295.01.T01:intron 30.0%
TACAAAACATTGTCCTCTAA+AGG - Chr5:16612038-16612057 MsG0580025295.01.T01:intron 30.0%
TACAAATTTGCGAGATAAAG+AGG - Chr5:16609987-16610006 MsG0580025295.01.T01:intron 30.0%
TAGCTTCAATATCTGAATGT+TGG + Chr5:16613086-16613105 None:intergenic 30.0%
TATTCTAGACAATATGCTGA+AGG + Chr5:16615383-16615402 None:intergenic 30.0%
TCAAAAGTAAATGAGGATGA+AGG + Chr5:16606981-16607000 None:intergenic 30.0%
TCAACAAAGTTGTCATCAAA+TGG + Chr5:16607549-16607568 None:intergenic 30.0%
TCACATCTAACATGATAGAA+CGG + Chr5:16610182-16610201 None:intergenic 30.0%
TCACTTTAACAAATGTACTG+TGG + Chr5:16608279-16608298 None:intergenic 30.0%
TCCAAATCAATTAATCACCA+AGG + Chr5:16607759-16607778 None:intergenic 30.0%
TCGTATATGTTACAAACGTA+TGG - Chr5:16607489-16607508 MsG0580025295.01.T01:CDS 30.0%
TCTTTGACGTAAAAATGTTG+AGG + Chr5:16613045-16613064 None:intergenic 30.0%
TGAGCTAAATCCTTATCAAT+TGG - Chr5:16610596-16610615 MsG0580025295.01.T01:intron 30.0%
TGTAGAAAACAAATGACAGA+AGG + Chr5:16614090-16614109 None:intergenic 30.0%
TGTAGCTATTATCACATCTT+GGG + Chr5:16615599-16615618 None:intergenic 30.0%
TGTCGAAATTTCATAAAGTG+TGG - Chr5:16608144-16608163 MsG0580025295.01.T01:CDS 30.0%
TGTTTCAAATCACAATCTGA+AGG - Chr5:16610266-16610285 MsG0580025295.01.T01:intron 30.0%
TTAAAGCAAATCACAATCAC+AGG - Chr5:16614655-16614674 MsG0580025295.01.T01:intron 30.0%
TTATGAGTCATGCTAACTAA+GGG - Chr5:16611979-16611998 MsG0580025295.01.T01:intron 30.0%
TTATGCAGTGAAAAGTTCAA+TGG + Chr5:16606796-16606815 None:intergenic 30.0%
TTCAGATATTGAAGCTATGA+AGG - Chr5:16613089-16613108 MsG0580025295.01.T01:intron 30.0%
TTCGACATAAATGTATACTG+AGG + Chr5:16608131-16608150 None:intergenic 30.0%
TTGAAGAGTGATGACATTTA+TGG + Chr5:16610078-16610097 None:intergenic 30.0%
TTGATCGCTACAAAATTAAG+GGG + Chr5:16607974-16607993 None:intergenic 30.0%
TTGTTATCTCTGTAGGATAT+TGG - Chr5:16615313-16615332 MsG0580025295.01.T01:intron 30.0%
TTTAAGCAATAACAAGTCCT+AGG + Chr5:16614640-16614659 None:intergenic 30.0%
! AAACAATCAGTCTTATGAAG+AGG - Chr5:16612855-16612874 MsG0580025295.01.T01:intron 30.0%
! ATTTTCCAAAACATAACAGC+AGG - Chr5:16611183-16611202 MsG0580025295.01.T01:intron 30.0%
! CAATTTGAAATCCGAACATA+TGG - Chr5:16614826-16614845 MsG0580025295.01.T01:intron 30.0%
! CATTTAAGTATAACCCCTTT+TGG - Chr5:16612752-16612771 MsG0580025295.01.T01:intron 30.0%
! CATTTCGCTAAAAAAGCATA+AGG + Chr5:16607467-16607486 None:intergenic 30.0%
! CTTAATTTTGTAGCGATCAA+TGG - Chr5:16607974-16607993 MsG0580025295.01.T01:intron 30.0%
! GAGATGTTTAGAATGAAGAA+AGG - Chr5:16608301-16608320 MsG0580025295.01.T01:CDS 30.0%
! GATTTAGCTCATATCTAACA+AGG + Chr5:16610587-16610606 None:intergenic 30.0%
! GTTCATAGGTTGTCATATTT+TGG - Chr5:16609042-16609061 MsG0580025295.01.T01:intron 30.0%
! TCATACACAGTTACTGTTTT+TGG - Chr5:16613685-16613704 MsG0580025295.01.T01:intron 30.0%
! TCCTTGGTGATTAATTGATT+TGG - Chr5:16607755-16607774 MsG0580025295.01.T01:CDS 30.0%
! TGGGTATGATCAATTCTTTT+TGG - Chr5:16607221-16607240 MsG0580025295.01.T01:intron 30.0%
! TGTTTAGAATGCAACTTTCA+AGG + Chr5:16612840-16612859 None:intergenic 30.0%
! TTCAGCATATTGTCTAGAAT+AGG - Chr5:16615382-16615401 MsG0580025295.01.T01:intron 30.0%
! TTTTACTTTAATCGTGCTCA+TGG - Chr5:16607425-16607444 MsG0580025295.01.T01:intron 30.0%
! TTTTATTGAGAGGTTGAGAT+AGG + Chr5:16608769-16608788 None:intergenic 30.0%
!! AAACCAATTTGTTGTACATG+TGG - Chr5:16615245-16615264 MsG0580025295.01.T01:intron 30.0%
!! AAATTGGCTTGATTAACTGT+TGG + Chr5:16615183-16615202 None:intergenic 30.0%
!! TAATATCTCTGAAACTTGGA+TGG - Chr5:16615468-16615487 MsG0580025295.01.T01:intron 30.0%
!! TGGTGATTAATTGATTTGGA+CGG - Chr5:16607759-16607778 MsG0580025295.01.T01:CDS 30.0%
!! TTCTATCTTGGTGTCATTAA+TGG - Chr5:16608642-16608661 MsG0580025295.01.T01:intron 30.0%
!! TTTTGTGAGTATCTTTGAGA+AGG + Chr5:16610381-16610400 None:intergenic 30.0%
!!! AACCACTTTTTGACAACTTT+TGG + Chr5:16607672-16607691 None:intergenic 30.0%
AAAGAACAAAAGAGCCAAGA+AGG + Chr5:16610848-16610867 None:intergenic 35.0%
AAAGTATGGACTTACTCTCT+TGG + Chr5:16608375-16608394 None:intergenic 35.0%
AACACAATACTGTGACATTG+TGG - Chr5:16608095-16608114 MsG0580025295.01.T01:CDS 35.0%
AACATAGAGAGAAGTAGCTA+TGG + Chr5:16609314-16609333 None:intergenic 35.0%
AAGTAAAACGGGTAGTAGTT+AGG + Chr5:16610346-16610365 None:intergenic 35.0%
AAGTAACCAAAACGGTTGAT+AGG + Chr5:16609861-16609880 None:intergenic 35.0%
AATAACTAGGTCAAACACTG+TGG - Chr5:16608822-16608841 MsG0580025295.01.T01:CDS 35.0%
AATCACATTACCACTGAACT+AGG + Chr5:16615284-16615303 None:intergenic 35.0%
AATGTATACTGAGGAAACCA+TGG + Chr5:16608122-16608141 None:intergenic 35.0%
ACATTAACAAGACGTGTTTG+TGG - Chr5:16610296-16610315 MsG0580025295.01.T01:intron 35.0%
ACCATAGAGAAGAGAAAGTA+AGG + Chr5:16609278-16609297 None:intergenic 35.0%
ACTGTCTCCTACAAACTATA+TGG - Chr5:16613777-16613796 MsG0580025295.01.T01:intron 35.0%
AGAACTATGGAACAAGTTAC+TGG - Chr5:16614899-16614918 MsG0580025295.01.T01:intron 35.0%
AGAGAGAAAAAGAAAGAGAG+AGG - Chr5:16607610-16607629 MsG0580025295.01.T01:CDS 35.0%
AGATGAGAATTGTTTGCCAA+TGG - Chr5:16609785-16609804 MsG0580025295.01.T01:intron 35.0%
AGCATCGTATATTCCAATGT+AGG + Chr5:16609240-16609259 None:intergenic 35.0%
AGGTAATAGTGCACAACAAA+AGG + Chr5:16607135-16607154 None:intergenic 35.0%
AGTGAAAAGTTCAATGGTGA+TGG + Chr5:16606790-16606809 None:intergenic 35.0%
AGTGCATCTCTAATAACTGT+TGG + Chr5:16614436-16614455 None:intergenic 35.0%
AGTTTATCAGCTTCTGACAT+AGG + Chr5:16614965-16614984 None:intergenic 35.0%
ATAACCCAAAAACTATGAGG+AGG + Chr5:16615776-16615795 None:intergenic 35.0%
ATGAAAAGGGAAGATGAACA+AGG - Chr5:16612991-16613010 MsG0580025295.01.T01:intron 35.0%
ATGAACAAGGACTTGAAGAA+TGG - Chr5:16613004-16613023 MsG0580025295.01.T01:intron 35.0%
ATGTATACTGAGGAAACCAT+GGG + Chr5:16608121-16608140 None:intergenic 35.0%
ATTAGTACATGAACGTGACT+TGG - Chr5:16608050-16608069 MsG0580025295.01.T01:intron 35.0%
CAAAAGATGAACAAAGCAGA+TGG - Chr5:16615520-16615539 MsG0580025295.01.T01:intron 35.0%
CAAGCTTAAGCATATAGCAA+TGG + Chr5:16606767-16606786 None:intergenic 35.0%
CATCACACCGTATGTATATA+CGG - Chr5:16608930-16608949 MsG0580025295.01.T01:intron 35.0%
CATTAATGGCCCAGATTTAA+TGG - Chr5:16608656-16608675 MsG0580025295.01.T01:intron 35.0%
CTCATATCTAACAAGGACAT+GGG + Chr5:16610580-16610599 None:intergenic 35.0%
CTCTTTCTTTCTTCAGATAG+AGG + Chr5:16613730-16613749 None:intergenic 35.0%
CTGAAGAAAGAAAGAGCAAA+TGG - Chr5:16613734-16613753 MsG0580025295.01.T01:intron 35.0%
CTGCATAACAATGCAATCTA+AGG - Chr5:16606808-16606827 MsG0580025295.01.T01:three_prime_UTR 35.0%
GAAAGGCTCGAATAACAAAT+TGG + Chr5:16615199-16615218 None:intergenic 35.0%
GAACAGAGAATGAAGTTGAA+CGG - Chr5:16613505-16613524 MsG0580025295.01.T01:intron 35.0%
GAATGTTGGATTGCATAAGA+AGG + Chr5:16613072-16613091 None:intergenic 35.0%
GAGATATGCTTGACATTGTT+TGG - Chr5:16612312-16612331 MsG0580025295.01.T01:intron 35.0%
GATGCTGCTAAAGTTCAATA+TGG - Chr5:16615064-16615083 MsG0580025295.01.T01:intron 35.0%
GCAATATTCAACATCGAACT+TGG + Chr5:16613585-16613604 None:intergenic 35.0%
GCAATTACAATGTGTTTGTG+TGG + Chr5:16608604-16608623 None:intergenic 35.0%
GCTAAGTGCAACATCTTATT+TGG - Chr5:16614155-16614174 MsG0580025295.01.T01:intron 35.0%
GCTATTGGCAAATACTCAAA+TGG + Chr5:16612425-16612444 None:intergenic 35.0%
GGCAAACAATTCTCATCTTA+AGG + Chr5:16609783-16609802 None:intergenic 35.0%
GTCCAAAAGTTGTCAAAAAG+TGG - Chr5:16607667-16607686 MsG0580025295.01.T01:CDS 35.0%
GTGTAGCTATTATCACATCT+TGG + Chr5:16615600-16615619 None:intergenic 35.0%
GTGTATGTTGTTATCTCTGT+AGG - Chr5:16615306-16615325 MsG0580025295.01.T01:intron 35.0%
GTTCTATCTTATCATAGCCT+CGG - Chr5:16610952-16610971 MsG0580025295.01.T01:intron 35.0%
GTTGGACAAATAACATATGC+AGG + Chr5:16612600-16612619 None:intergenic 35.0%
GTTTAGAGAGATAGGAACAA+AGG - Chr5:16607911-16607930 MsG0580025295.01.T01:intron 35.0%
GTTTATCAGCTTCTGACATA+GGG + Chr5:16614964-16614983 None:intergenic 35.0%
TACCTCAAAGATTCTACCAT+TGG + Chr5:16613833-16613852 None:intergenic 35.0%
TAGCATATGACTAAACAGCA+TGG + Chr5:16612563-16612582 None:intergenic 35.0%
TAGCTCATAGCATATTAGTC+GGG - Chr5:16608534-16608553 MsG0580025295.01.T01:CDS 35.0%
TAGTCACGTGCAAGTATTAT+TGG + Chr5:16611945-16611964 None:intergenic 35.0%
TATTAGAGATGCACTTGCAA+AGG - Chr5:16614441-16614460 MsG0580025295.01.T01:intron 35.0%
TCCTTACTTTCTCTTCTCTA+TGG - Chr5:16609274-16609293 MsG0580025295.01.T01:intron 35.0%
TGAACAAGGACTTGAAGAAT+GGG - Chr5:16613005-16613024 MsG0580025295.01.T01:intron 35.0%
TGACATTTATGGCGAATAGA+TGG + Chr5:16610067-16610086 None:intergenic 35.0%
TGATCGCTACAAAATTAAGG+GGG + Chr5:16607973-16607992 None:intergenic 35.0%
TGCTAAAGTTCAATATGGCA+AGG - Chr5:16615069-16615088 MsG0580025295.01.T01:intron 35.0%
TTCAAATCACAATCTGAAGG+TGG - Chr5:16610269-16610288 MsG0580025295.01.T01:intron 35.0%
TTCCAAGACACATGAAAAGT+TGG + Chr5:16608970-16608989 None:intergenic 35.0%
TTGAGCAAGTCCTTTATTGT+AGG - Chr5:16609373-16609392 MsG0580025295.01.T01:CDS 35.0%
! AACTTCATGGTCTTTTGTGA+AGG - Chr5:16614937-16614956 MsG0580025295.01.T01:intron 35.0%
! ACTTCATGGTCTTTTGTGAA+GGG - Chr5:16614938-16614957 MsG0580025295.01.T01:intron 35.0%
! AGCTCAACCATATAGTTTGT+AGG + Chr5:16613787-16613806 None:intergenic 35.0%
! AGTTCAGTGGTAATGTGATT+TGG - Chr5:16615284-16615303 MsG0580025295.01.T01:intron 35.0%
! ATCTTAAGGAGTCCTTTTTG+TGG + Chr5:16609769-16609788 None:intergenic 35.0%
! ATGCTAACTTGTACCTTTAG+AGG + Chr5:16612054-16612073 None:intergenic 35.0%
! CAATGGTGAAAACAGAGTTT+TGG - Chr5:16614206-16614225 MsG0580025295.01.T01:CDS 35.0%
! CTTTACCTGCTGTTATGTTT+TGG + Chr5:16611191-16611210 None:intergenic 35.0%
! GACGGAGATACCTTAATTTT+GGG - Chr5:16607777-16607796 MsG0580025295.01.T01:intron 35.0%
! GTATCAGAAAGACCAGTTTT+TGG + Chr5:16614316-16614335 None:intergenic 35.0%
! TCATTTCCTATCAACCGTTT+TGG - Chr5:16609852-16609871 MsG0580025295.01.T01:intron 35.0%
! TTACTTGGTGAAGATGTTAC+TGG - Chr5:16613129-16613148 MsG0580025295.01.T01:intron 35.0%
! TTCCAACTTTTCATGTGTCT+TGG - Chr5:16608965-16608984 MsG0580025295.01.T01:intron 35.0%
! TTTGCCTCCTCATAGTTTTT+GGG - Chr5:16615769-16615788 MsG0580025295.01.T01:five_prime_UTR 35.0%
! TTTTCATGTGTCTTGGAATG+CGG - Chr5:16608972-16608991 MsG0580025295.01.T01:intron 35.0%
! TTTTGGTGAGCTATGGAAAT+TGG - Chr5:16613702-16613721 MsG0580025295.01.T01:intron 35.0%
!! ATCAGATCAATCACCGATTT+GGG + Chr5:16610446-16610465 None:intergenic 35.0%
!! ATTTTGGACATTGTTGGTGA+AGG - Chr5:16608230-16608249 MsG0580025295.01.T01:CDS 35.0%
!! CAACGACTAAGTTGATAAGA+AGG + Chr5:16613219-16613238 None:intergenic 35.0%
!! GGAATGGATAATTGAGTTGA+AGG - Chr5:16609662-16609681 MsG0580025295.01.T01:CDS 35.0%
!! GGATAATTGAGTTGAAGGAT+TGG - Chr5:16609667-16609686 MsG0580025295.01.T01:CDS 35.0%
!! GTGAAAACAGAGTTTTGGTA+TGG - Chr5:16614211-16614230 MsG0580025295.01.T01:CDS 35.0%
!! TCTCTCTCCTTTAAAATGCA+AGG + Chr5:16607841-16607860 None:intergenic 35.0%
!! TTAGTTTGTGGCTTCATTGT+GGG - Chr5:16610402-16610421 MsG0580025295.01.T01:intron 35.0%
!! TTTAGTTTGTGGCTTCATTG+TGG - Chr5:16610401-16610420 MsG0580025295.01.T01:intron 35.0%
!!! CGATTTGGGTTTTAAAACAC+CGG + Chr5:16610432-16610451 None:intergenic 35.0%
!!! CGGTGTTTTAAAACCCAAAT+CGG - Chr5:16610430-16610449 MsG0580025295.01.T01:intron 35.0%
!!! TTACTGTTTTTGGTGAGCTA+TGG - Chr5:16613695-16613714 MsG0580025295.01.T01:intron 35.0%
!!! TTGTTTTGGTATTGACAGCA+AGG - Chr5:16612641-16612660 MsG0580025295.01.T01:intron 35.0%
AAAGACCATGAAGTTCGAAC+CGG + Chr5:16614932-16614951 None:intergenic 40.0%
AATGCCATCACAAACTTGTC+AGG - Chr5:16613189-16613208 MsG0580025295.01.T01:intron 40.0%
ACAAGTTACTGGCAAATCAC+CGG - Chr5:16614910-16614929 MsG0580025295.01.T01:intron 40.0%
ACAGGATGCACTTGATTCAA+TGG - Chr5:16614189-16614208 MsG0580025295.01.T01:CDS 40.0%
ACATGATAGAACGGAGCTAA+CGG + Chr5:16610173-16610192 None:intergenic 40.0%
ACCATGGAGTGGAAGTAAAA+CGG + Chr5:16610358-16610377 None:intergenic 40.0%
AGATGTTACTGGAGGAACTA+AGG - Chr5:16613140-16613159 MsG0580025295.01.T01:intron 40.0%
AGGATTGGATCTTGATGAGT+AGG - Chr5:16609682-16609701 MsG0580025295.01.T01:CDS 40.0%
ATACGGTGTGATGACAACTT+TGG + Chr5:16608923-16608942 None:intergenic 40.0%
ATATTAGTCGGGTAGCACTT+TGG - Chr5:16608545-16608564 MsG0580025295.01.T01:CDS 40.0%
ATGAACCAACCTCTTTCTTG+CGG + Chr5:16614338-16614357 None:intergenic 40.0%
ATGCCTATTTATGACTCGTG+AGG + Chr5:16609427-16609446 None:intergenic 40.0%
ATTTGGCAGCCTTGAATACT+TGG + Chr5:16614378-16614397 None:intergenic 40.0%
CATACCTGACAAGTTTGTGA+TGG + Chr5:16613196-16613215 None:intergenic 40.0%
CTACCTCACGAGTCATAAAT+AGG - Chr5:16609421-16609440 MsG0580025295.01.T01:CDS 40.0%
CTATTTATGACTCGTGAGGT+AGG + Chr5:16609423-16609442 None:intergenic 40.0%
CTCGTTGAAAGAGAGAACTA+TGG - Chr5:16614886-16614905 MsG0580025295.01.T01:intron 40.0%
GAATGTCAAGTTCATGTGCT+TGG + Chr5:16609480-16609499 None:intergenic 40.0%
GAATGTTCTATGTTGCAGTC+TGG - Chr5:16614725-16614744 MsG0580025295.01.T01:intron 40.0%
GACTAATATGGGTAGCACTT+CGG + Chr5:16608701-16608720 None:intergenic 40.0%
GATGTTACTGGAGGAACTAA+GGG - Chr5:16613141-16613160 MsG0580025295.01.T01:intron 40.0%
GATTCCACCCTTTGTCTTTA+GGG + Chr5:16610138-16610157 None:intergenic 40.0%
GATTGATCTGATCAAGACAC+TGG - Chr5:16610454-16610473 MsG0580025295.01.T01:intron 40.0%
GCAGCATCAAGAAATGTTTG+AGG + Chr5:16615052-16615071 None:intergenic 40.0%
GCTAAGCAAAACAATGCCAA+TGG - Chr5:16613814-16613833 MsG0580025295.01.T01:intron 40.0%
GCTCATATCTAACAAGGACA+TGG + Chr5:16610581-16610600 None:intergenic 40.0%
GGATATTGGACATTCCATTC+TGG - Chr5:16615327-16615346 MsG0580025295.01.T01:intron 40.0%
GGATTGGATCTTGATGAGTA+GGG - Chr5:16609683-16609702 MsG0580025295.01.T01:CDS 40.0%
GGCTAAATTTCCAAGAACTC+TGG + Chr5:16615362-16615381 None:intergenic 40.0%
GTGTATATGGCCCACAAAAA+TGG - Chr5:16609011-16609030 MsG0580025295.01.T01:intron 40.0%
TAAGCATAGAGTCCAACTTC+TGG + Chr5:16613990-16614009 None:intergenic 40.0%
TAGAAAGGCTCGAATGTAGA+TGG + Chr5:16615149-16615168 None:intergenic 40.0%
TCACCTCAAGTACCAAAAAC+TGG - Chr5:16614301-16614320 MsG0580025295.01.T01:intron 40.0%
TCTCTAATAACTGTTGGCAC+AGG + Chr5:16614430-16614449 None:intergenic 40.0%
TCTTCAAGCAAAGATGCGTT+TGG - Chr5:16612943-16612962 MsG0580025295.01.T01:intron 40.0%
TGATAATAGCTACACCAAGC+AGG - Chr5:16615605-16615624 MsG0580025295.01.T01:intron 40.0%
TGATCAAGACACTGGATTAC+TGG - Chr5:16610462-16610481 MsG0580025295.01.T01:intron 40.0%
TGCCAATGGTAGAATCTTTG+AGG - Chr5:16613828-16613847 MsG0580025295.01.T01:intron 40.0%
TGGCCACATGTACAACAAAT+TGG + Chr5:16615251-16615270 None:intergenic 40.0%
TGTAACATCCCAAAACACCT+AGG + Chr5:16608512-16608531 None:intergenic 40.0%
TGTACATGTGGCCAAAAAGT+TGG - Chr5:16615257-16615276 MsG0580025295.01.T01:intron 40.0%
TGTTAGATGTGATATGGGTG+TGG - Chr5:16610190-16610209 MsG0580025295.01.T01:intron 40.0%
TTAACAAGACGTGTTTGTGG+TGG - Chr5:16610299-16610318 MsG0580025295.01.T01:intron 40.0%
TTCTATGTTGCAGTCTGGAA+AGG - Chr5:16614730-16614749 MsG0580025295.01.T01:intron 40.0%
TTGACAGCTGAATCAACTTC+TGG - Chr5:16614782-16614801 MsG0580025295.01.T01:intron 40.0%
TTGACTACGAGTGTCTAATG+TGG - Chr5:16613415-16613434 MsG0580025295.01.T01:intron 40.0%
TTTCATGTGTCTTGGAATGC+GGG - Chr5:16608973-16608992 MsG0580025295.01.T01:intron 40.0%
TTTCTGATACCGCAAGAAAG+AGG - Chr5:16614326-16614345 MsG0580025295.01.T01:intron 40.0%
TTTGTGTGGCCCAGATTTAA+TGG + Chr5:16608590-16608609 None:intergenic 40.0%
! AAAAGTTGGTCCTAGTTCAG+TGG - Chr5:16615271-16615290 MsG0580025295.01.T01:intron 40.0%
! AAGAAAGAGGTTGGTTCATC+AGG - Chr5:16614339-16614358 MsG0580025295.01.T01:intron 40.0%
! AGAAAGAGGTTGGTTCATCA+GGG - Chr5:16614340-16614359 MsG0580025295.01.T01:intron 40.0%
! AGTATCTTTGAGAAGGACCA+TGG + Chr5:16610374-16610393 None:intergenic 40.0%
! ATGGTTAGCCCTAAAGACAA+AGG - Chr5:16610127-16610146 MsG0580025295.01.T01:intron 40.0%
! ATTTGGATAGGACCCTTTTG+TGG - Chr5:16610809-16610828 MsG0580025295.01.T01:intron 40.0%
! CTGAACTAGGACCAACTTTT+TGG + Chr5:16615271-16615290 None:intergenic 40.0%
! GATCAGATCAATCACCGATT+TGG + Chr5:16610447-16610466 None:intergenic 40.0%
! GGACGGAGATACCTTAATTT+TGG - Chr5:16607776-16607795 MsG0580025295.01.T01:CDS 40.0%
! GGAGATACCTTAATTTTGGG+TGG - Chr5:16607780-16607799 MsG0580025295.01.T01:intron 40.0%
! GTTTGCCTCCTCATAGTTTT+TGG - Chr5:16615768-16615787 MsG0580025295.01.T01:five_prime_UTR 40.0%
! TAGTTTGTGGCTTCATTGTG+GGG - Chr5:16610403-16610422 MsG0580025295.01.T01:intron 40.0%
! TGGTTAGCCCTAAAGACAAA+GGG - Chr5:16610128-16610147 MsG0580025295.01.T01:intron 40.0%
! TTTGGATAGGACCCTTTTGT+GGG - Chr5:16610810-16610829 MsG0580025295.01.T01:intron 40.0%
!! AAAATTAAGGGGGAGCACTT+CGG + Chr5:16607963-16607982 None:intergenic 40.0%
!! AACAGAGTTTTGGTATGGTG+AGG - Chr5:16614216-16614235 MsG0580025295.01.T01:exon 40.0%
!! AAGTAGGAGGTTGATGTGTA+AGG - Chr5:16610234-16610253 MsG0580025295.01.T01:intron 40.0%
!! ACAGAGTTTTGGTATGGTGA+GGG - Chr5:16614217-16614236 MsG0580025295.01.T01:exon 40.0%
!! ACCAAGATAGAAGTGTTGTG+TGG + Chr5:16608634-16608653 None:intergenic 40.0%
!! CTTAATTTTGGGTGGCACTT+GGG - Chr5:16607788-16607807 MsG0580025295.01.T01:intron 40.0%
!! GAGACAAAGTTTTGACGACA+CGG + Chr5:16610986-16611005 None:intergenic 40.0%
!! GCTGTAAAAGTGTTTCAGCA+CGG + Chr5:16615003-16615022 None:intergenic 40.0%
!! GTTCTGGTTTCAGACTCTTT+CGG - Chr5:16607076-16607095 MsG0580025295.01.T01:CDS 40.0%
!! TAGCACTTTGGTGCCATTAA+TGG - Chr5:16608557-16608576 MsG0580025295.01.T01:CDS 40.0%
!! TATCTCTGAAACTTGGATGG+TGG - Chr5:16615471-16615490 MsG0580025295.01.T01:intron 40.0%
!! TGGTTGGATTGGTGAATCAT+TGG - Chr5:16610482-16610501 MsG0580025295.01.T01:intron 40.0%
!! TTGGCATTGTTTTGCTTAGC+AGG + Chr5:16613814-16613833 None:intergenic 40.0%
!!! AGACCAGTTTTTGGTACTTG+AGG + Chr5:16614307-16614326 None:intergenic 40.0%
!!! GTTTTTGGTACTTGAGGTGA+TGG + Chr5:16614301-16614320 None:intergenic 40.0%
!!! TTCGGTGCCTTGCATTTTAA+AGG - Chr5:16607831-16607850 MsG0580025295.01.T01:intron 40.0%
AAGGGAAAGACATGAGTGTG+CGG - Chr5:16614254-16614273 MsG0580025295.01.T01:five_prime_UTR 45.0%
AATGGCGAAGAGAAATGGAC+TGG - Chr5:16613752-16613771 MsG0580025295.01.T01:intron 45.0%
AGCAGAACAAGTAGAGGAGA+CGG - Chr5:16612880-16612899 MsG0580025295.01.T01:intron 45.0%
ATGAGACTTTGGGCTATCCT+TGG - Chr5:16607739-16607758 MsG0580025295.01.T01:CDS 45.0%
ATGGCCCAGATTTAATGGCA+CGG - Chr5:16608661-16608680 MsG0580025295.01.T01:intron 45.0%
CAAGACACTGGATTACTGGT+TGG - Chr5:16610466-16610485 MsG0580025295.01.T01:intron 45.0%
CACACTCATGTCTTTCCCTT+CGG + Chr5:16614254-16614273 None:intergenic 45.0%
CCAAGTGCCACCCAAAATTA+AGG + Chr5:16607790-16607809 None:intergenic 45.0%
CCATGGAGTGGAAGTAAAAC+GGG + Chr5:16610357-16610376 None:intergenic 45.0%
CTTGGTGAAGATGTTACTGG+AGG - Chr5:16613132-16613151 MsG0580025295.01.T01:intron 45.0%
GAAGCGTAAGATAGTTGACC+TGG - Chr5:16610553-16610572 MsG0580025295.01.T01:intron 45.0%
GAAGCGTATTCCAGAGTTCT+TGG - Chr5:16615349-16615368 MsG0580025295.01.T01:intron 45.0%
GACCACTAGCTACAATCCAT+TGG + Chr5:16609804-16609823 None:intergenic 45.0%
GAGATTTGGCATGCCTACAT+TGG - Chr5:16609224-16609243 MsG0580025295.01.T01:intron 45.0%
GAGCAAATGGCGAAGAGAAA+TGG - Chr5:16613747-16613766 MsG0580025295.01.T01:intron 45.0%
GAGGAAAGCAGAACAAGTAG+AGG - Chr5:16612874-16612893 MsG0580025295.01.T01:intron 45.0%
GCCACACAACACTTCTATCT+TGG - Chr5:16608630-16608649 MsG0580025295.01.T01:intron 45.0%
GGATTCCACCCTTTGTCTTT+AGG + Chr5:16610139-16610158 None:intergenic 45.0%
GTGTGCGGCATAGTAAAAGA+TGG - Chr5:16614269-16614288 MsG0580025295.01.T01:intron 45.0%
TACTTGCACGTGACTATACG+TGG - Chr5:16611949-16611968 MsG0580025295.01.T01:intron 45.0%
TGAATGTCTGCACGAGCTTT+AGG + Chr5:16613949-16613968 None:intergenic 45.0%
TGATACCGCAAGAAAGAGGT+TGG - Chr5:16614330-16614349 MsG0580025295.01.T01:intron 45.0%
TGCGGCATAGTAAAAGATGG+TGG - Chr5:16614272-16614291 MsG0580025295.01.T01:intron 45.0%
TGTCTGGTGCATTAGTAGAG+AGG - Chr5:16615633-16615652 MsG0580025295.01.T01:intron 45.0%
TTAGCCCTAAAGACAAAGGG+TGG - Chr5:16610131-16610150 MsG0580025295.01.T01:intron 45.0%
! CACTGGATTACTGGTTGGAT+TGG - Chr5:16610471-16610490 MsG0580025295.01.T01:intron 45.0%
! GATAGGAACAAAGGCACGAA+AGG - Chr5:16607920-16607939 MsG0580025295.01.T01:intron 45.0%
! TCTGGAATACGCTTCCAGAA+TGG + Chr5:16615344-16615363 None:intergenic 45.0%
! TTGGATAGGACCCTTTTGTG+GGG - Chr5:16610811-16610830 MsG0580025295.01.T01:intron 45.0%
!! AATCACCGGTTCGAACTTCA+TGG - Chr5:16614924-16614943 MsG0580025295.01.T01:intron 45.0%
!! CCTTAATTTTGGGTGGCACT+TGG - Chr5:16607787-16607806 MsG0580025295.01.T01:intron 45.0%
!! CCTTTGCTTTTGGTGGCTTT+CGG - Chr5:16607813-16607832 MsG0580025295.01.T01:intron 45.0%
!! GAGCTAACGGTTCAAGTTGT+GGG + Chr5:16610160-16610179 None:intergenic 45.0%
!! TAAGGGCATCACTACAGCTT+TGG - Chr5:16613158-16613177 MsG0580025295.01.T01:intron 45.0%
!! TAATGGCACGGTGCCATTAA+TGG - Chr5:16608673-16608692 MsG0580025295.01.T01:intron 45.0%
!! TAATGGCACGGTGCCATTAA+TGG + Chr5:16608692-16608673 None:intergenic 45.0%
!! TAGCACTTCGGTGCCATTAA+TGG + Chr5:16608689-16608708 None:intergenic 45.0%
!! TGCCAATGGATTGTAGCTAG+TGG - Chr5:16609799-16609818 MsG0580025295.01.T01:intron 45.0%
!! TTAAATAATATCAATTAATT+GGG - Chr5:16612473-16612492 MsG0580025295.01.T01:intron 5.0%
!! TTTAAATAATATCAATTAAT+TGG - Chr5:16612472-16612491 MsG0580025295.01.T01:intron 5.0%
!!! AAGATTAATTTAATTTAAAA+TGG - Chr5:16607388-16607407 MsG0580025295.01.T01:intron 5.0%
!!! AGATTAATTTAATTTAAAAT+GGG - Chr5:16607389-16607408 MsG0580025295.01.T01:intron 5.0%
!!! ATTTTTTCTTTTAAATTTTT+TGG - Chr5:16608008-16608027 MsG0580025295.01.T01:intron 5.0%
!!! TATTTTATGATTTTATATAA+TGG - Chr5:16612785-16612804 MsG0580025295.01.T01:intron 5.0%
!!! TTTAAAATAATACTATATTT+TGG - Chr5:16608214-16608233 MsG0580025295.01.T01:CDS 5.0%
AACTCACTAAGTTGCTCCCC+TGG - Chr5:16615439-16615458 MsG0580025295.01.T01:intron 50.0%
AGAACAAGTAGAGGAGACGG+AGG - Chr5:16612883-16612902 MsG0580025295.01.T01:intron 50.0%
AGAGAAGAGAGCCCCACAAA+AGG + Chr5:16610825-16610844 None:intergenic 50.0%
CAGTCTGGAAAGGCAAACCT+TGG - Chr5:16614740-16614759 MsG0580025295.01.T01:intron 50.0%
CCGAAAGCCACCAAAAGCAA+AGG + Chr5:16607816-16607835 None:intergenic 50.0%
CCTTGGACAAGAACTGCACA+AGG - Chr5:16614757-16614776 MsG0580025295.01.T01:intron 50.0%
CCTTGTGCAGTTCTTGTCCA+AGG + Chr5:16614760-16614779 None:intergenic 50.0%
GAGAAGAGAGCCCCACAAAA+GGG + Chr5:16610824-16610843 None:intergenic 50.0%
GGTCTCAAGGGCCATATGTT+CGG + Chr5:16614840-16614859 None:intergenic 50.0%
GGTGGTACGCCAAGTATTCA+AGG - Chr5:16614366-16614385 MsG0580025295.01.T01:intron 50.0%
GTGGCCCAGATTTAATGGCA+CGG + Chr5:16608585-16608604 None:intergenic 50.0%
TACTGTGACATTGTGGCCCA+TGG - Chr5:16608102-16608121 MsG0580025295.01.T01:CDS 50.0%
TAGGTCAAACACTGTGGTCG+TGG - Chr5:16608828-16608847 MsG0580025295.01.T01:intron 50.0%
TCTAACAAGGACATGGGACC+AGG + Chr5:16610574-16610593 None:intergenic 50.0%
TCTTCCAGCACTCCAGAAGT+TGG - Chr5:16613975-16613994 MsG0580025295.01.T01:intron 50.0%
! CACTTGGGTGCCTTTGCTTT+TGG - Chr5:16607803-16607822 MsG0580025295.01.T01:intron 50.0%
! CCCGTTTTACTTCCACTCCA+TGG - Chr5:16610354-16610373 MsG0580025295.01.T01:intron 50.0%
! CTTTGAGAAGGACCATGGAG+TGG + Chr5:16610369-16610388 None:intergenic 50.0%
! GAGGTTGGTTCATCAGGGAA+AGG - Chr5:16614345-16614364 MsG0580025295.01.T01:intron 50.0%
! GGCACCGTGCCATTAAATCT+GGG - Chr5:16608578-16608597 MsG0580025295.01.T01:CDS 50.0%
! GGCACCGTGCCATTAAATCT+GGG + Chr5:16608597-16608578 None:intergenic 50.0%
! GTTGGTTCATCAGGGAAAGG+TGG - Chr5:16614348-16614367 MsG0580025295.01.T01:intron 50.0%
! TGGCACCGTGCCATTAAATC+TGG - Chr5:16608577-16608596 MsG0580025295.01.T01:CDS 50.0%
! TGGCACCGTGCCATTAAATC+TGG + Chr5:16608596-16608577 None:intergenic 50.0%
!! GAGTTTTGGTATGGTGAGGG+AGG - Chr5:16614220-16614239 MsG0580025295.01.T01:exon 50.0%
!! GGAGCTAACGGTTCAAGTTG+TGG + Chr5:16610161-16610180 None:intergenic 50.0%
!! TTGGGTGCCTTTGCTTTTGG+TGG - Chr5:16607806-16607825 MsG0580025295.01.T01:intron 50.0%
ACGACACGGAGAAACTTCCG+AGG + Chr5:16610972-16610991 None:intergenic 55.0%
CACCAAGCAGGAGTAGTGTC+TGG - Chr5:16615617-16615636 MsG0580025295.01.T01:intron 55.0%
CACCAGACACTACTCCTGCT+TGG + Chr5:16615622-16615641 None:intergenic 55.0%
GACTCGTGAGGTAGGACTGT+AGG + Chr5:16609415-16609434 None:intergenic 55.0%
GGGCTCTCTTCTCTCCTTCT+TGG - Chr5:16610831-16610850 MsG0580025295.01.T01:intron 55.0%
GTGAGGTAGGACTGTAGGAC+AGG + Chr5:16609410-16609429 None:intergenic 55.0%
TGGCTTCATTGTGGGGTAGC+CGG - Chr5:16610410-16610429 MsG0580025295.01.T01:intron 55.0%
!! ACGAAAGGCACCGAAGCCAA+AGG - Chr5:16607935-16607954 MsG0580025295.01.T01:intron 55.0%
!! CACTTCGGTGCCTTTGGCTT+CGG + Chr5:16607948-16607967 None:intergenic 55.0%
!! GACTAGCTTGCTGCAGCAGA+GGG - Chr5:16608323-16608342 MsG0580025295.01.T01:CDS 55.0%
!! GAGTCCAACTTCTGGAGTGC+TGG + Chr5:16613982-16614001 None:intergenic 55.0%
AGGGAGGAAGCAGGACCGAA+GGG - Chr5:16614236-16614255 MsG0580025295.01.T01:five_prime_UTR 60.0%
GGTATGGTGAGGGAGGAAGC+AGG - Chr5:16614227-16614246 MsG0580025295.01.T01:exon 60.0%
!! GGACTAGCTTGCTGCAGCAG+AGG - Chr5:16608322-16608341 MsG0580025295.01.T01:CDS 60.0%
GAGGGAGGAAGCAGGACCGA+AGG - Chr5:16614235-16614254 MsG0580025295.01.T01:five_prime_UTR 65.0%
!! GGGGAGCACTTCGGTGCCTT+TGG + Chr5:16607954-16607973 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 16606689 16615849 16606689 ID=MsG0580025295.01;Name=MsG0580025295.01
Chr5 mRNA 16606689 16615849 16606689 ID=MsG0580025295.01.T01;Parent=MsG0580025295.01;Name=MsG0580025295.01.T01;_AED=0.39;_eAED=0.39;_QI=193|1|1|1|0.71|0.62|8|159|559
Chr5 exon 16606689 16607210 16606689 ID=MsG0580025295.01.T01:exon:1835;Parent=MsG0580025295.01.T01
Chr5 exon 16607448 16607795 16607448 ID=MsG0580025295.01.T01:exon:1834;Parent=MsG0580025295.01.T01
Chr5 exon 16608076 16608345 16608076 ID=MsG0580025295.01.T01:exon:1833;Parent=MsG0580025295.01.T01
Chr5 exon 16608527 16608601 16608527 ID=MsG0580025295.01.T01:exon:1832;Parent=MsG0580025295.01.T01
Chr5 exon 16608689 16608843 16608689 ID=MsG0580025295.01.T01:exon:1831;Parent=MsG0580025295.01.T01
Chr5 exon 16609328 16609720 16609328 ID=MsG0580025295.01.T01:exon:1830;Parent=MsG0580025295.01.T01
Chr5 exon 16614159 16614286 16614159 ID=MsG0580025295.01.T01:exon:1829;Parent=MsG0580025295.01.T01
Chr5 exon 16615709 16615849 16615709 ID=MsG0580025295.01.T01:exon:1828;Parent=MsG0580025295.01.T01
Chr5 five_prime_UTR 16615709 16615849 16615709 ID=MsG0580025295.01.T01:five_prime_utr;Parent=MsG0580025295.01.T01
Chr5 five_prime_UTR 16614235 16614286 16614235 ID=MsG0580025295.01.T01:five_prime_utr;Parent=MsG0580025295.01.T01
Chr5 CDS 16614159 16614234 16614159 ID=MsG0580025295.01.T01:cds;Parent=MsG0580025295.01.T01
Chr5 CDS 16609328 16609720 16609328 ID=MsG0580025295.01.T01:cds;Parent=MsG0580025295.01.T01
Chr5 CDS 16608689 16608843 16608689 ID=MsG0580025295.01.T01:cds;Parent=MsG0580025295.01.T01
Chr5 CDS 16608527 16608601 16608527 ID=MsG0580025295.01.T01:cds;Parent=MsG0580025295.01.T01
Chr5 CDS 16608076 16608345 16608076 ID=MsG0580025295.01.T01:cds;Parent=MsG0580025295.01.T01
Chr5 CDS 16607448 16607795 16607448 ID=MsG0580025295.01.T01:cds;Parent=MsG0580025295.01.T01
Chr5 CDS 16606848 16607210 16606848 ID=MsG0580025295.01.T01:cds;Parent=MsG0580025295.01.T01
Chr5 three_prime_UTR 16606689 16606847 16606689 ID=MsG0580025295.01.T01:three_prime_utr;Parent=MsG0580025295.01.T01
Gene Sequence

>MsG0580025295.01.T01

ATGTTTAGAATGAAGAAAGGACTAGCTTGCTGCAGCAGAGGGAAGAAAATCAGCATTGATTTTCATGACCAAGAGAGAATTATGACATATAATGGCCTTGAAAGTTGCATTCTAAACAATCAGTCTTATGAAGAGGAAAGCAGAACAAGTAGAGGAGACGGAGGCATAACCGATTCATTTGATGACGATGATTCAAGCTGTTCTTCAAGCAAAGATGCGTTTGGATCATTCTCTTCAAAGTGTTTAACAATGAAAAGGGAAGATGAACAAGGACTTGAAGAATGGGAACTCTCAGAAAGTCCTCAACATTTTTACGTCAAAGAGAAACCTTCTTATGCAATCCAACATTCAGATATTGAAGCTATGAAGGAAAAATTTTCAAAGCTCTTACTTGGTGAAGATGTTACTGGAGGAACTAAGGGCATCACTACAGCTTTGGCACTGTCTAATGCCATCACAAACTTGTCAGTTACTGTTTTTGGTGAGCTATGGAAATTGGAACCTCTATCTGAAGAAAGAAAGAGCAAATGGCGAAGAGAAATGGACTGGTTACTGTCTCCTACAAACTATATGGTTGAGCTAGTTCCTGCTAAGCAAAACAATGCCAATGGTAGAATCTTTGAGATAATGACGCCTAAAGCTCGTGCAGACATTCACATGAATCTTCCAGCACTCCAGAAGTTGGACTCTATGCTTATCGATGCACTTGATTCAATGGTGAAAACAGAGTTTTGGTATGGTGAGGGAGGAAGCAGGACCGAAGGGAAAGACATGAGTGTGCGGCATAGTAAAAGATGGTGGCTTCCATCACCTCAAGTACCAAAAACTGGTCTTTCTGATACCGCAAGAAAGAGGTTGGTTCATCAGGGAAAGGTGGTACGCCAAGTATTCAAGGCTGCCAAATCTATCAATGAAAATGTGTTGCTTGAAATGCCTGTGCCAACAGTTATTAGAGATGCACTTGCAAAGTCTGGAAAGGCAAACCTTGGACAAGAACTGCACAAGGTTTTGACAGCTGAATCAACTTCTGGAGAAGACATGATTAAATCTCTCAATTTGAAATCCGAACATATGGCCCTTGAGACCATTAATAAATTGGAAGCTGTTATATTCTCGTTGAAAGAGAGAACTATGGAACAAGTTACTGGCAAATCACCGGTTCGAACTTCATGGTCTTTTGTGAAGGGCCCTATGTCAGAAGCTGATAAACTTGAGTTATTATTGGACCGTGCTGAAACACTTTTACAGCTTCTTAAAATCAGATATCCCAATCTTCCTCAAACATTTCTTGATGCTGCTAAAGTTCAATATGGCAAGGATATTGGACATTCCATTCTGGAAGCGTATTCCAGAGTTCTTGGAAATTTAGCCTTCAGCATATTGTCTAGAATAGGAGATATATTACAAGAGGATTGTCTAAGCAGTTCTAACTCACTAAGTTGCTCCCCTGGAATAAATAATATCTCTGAAACTTGGATGGTGGATTCACATATTAAGCAATCCTTACTTCAAAAGATGAACAAAGCAGATGGACAATGTTGTGACAGTACTTCAGATTTAGAGCTCAAATCATTTGATGCTAAATCCCAAGATGTGATAATAGCTACACCAAGCAGGAGTAGTGTCTGGTGCATTAGTAGAGAGGCTTGTACGAGTGTGTCTACTCAAAATTCGCCATAG

Protein sequence

>MsG0580025295.01.T01

MFRMKKGLACCSRGKKISIDFHDQERIMTYNGLESCILNNQSYEEESRTSRGDGGITDSFDDDDSSCSSSKDAFGSFSSKCLTMKREDEQGLEEWELSESPQHFYVKEKPSYAIQHSDIEAMKEKFSKLLLGEDVTGGTKGITTALALSNAITNLSVTVFGELWKLEPLSEERKSKWRREMDWLLSPTNYMVELVPAKQNNANGRIFEIMTPKARADIHMNLPALQKLDSMLIDALDSMVKTEFWYGEGGSRTEGKDMSVRHSKRWWLPSPQVPKTGLSDTARKRLVHQGKVVRQVFKAAKSINENVLLEMPVPTVIRDALAKSGKANLGQELHKVLTAESTSGEDMIKSLNLKSEHMALETINKLEAVIFSLKERTMEQVTGKSPVRTSWSFVKGPMSEADKLELLLDRAETLLQLLKIRYPNLPQTFLDAAKVQYGKDIGHSILEAYSRVLGNLAFSILSRIGDILQEDCLSSSNSLSCSPGINNISETWMVDSHIKQSLLQKMNKADGQCCDSTSDLELKSFDAKSQDVIIATPSRSSVWCISREACTSVSTQNSP*