AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180002227.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180002227.01.T01 MTR_1g050505 97.270 586 16 0 94 679 1 586 0.0 1172
MsG0180002227.01.T01 MTR_1g087380 70.084 595 150 4 90 678 18 590 0.0 832
MsG0180002227.01.T01 MTR_7g108785 49.264 611 274 7 97 679 5 607 0.0 590
MsG0180002227.01.T01 MTR_7g084420 78.788 33 7 0 58 90 1 33 3.14e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180002227.01.T01 AT3G56640 70.339 590 169 2 93 678 1 588 0.0 854
MsG0180002227.01.T01 AT4G02350 47.069 580 273 4 114 679 33 592 0.0 537
MsG0180002227.01.T01 AT4G02350 47.069 580 273 4 114 679 33 592 0.0 537

Find 167 sgRNAs with CRISPR-Local

Find 506 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAATTGCTGGTTTCTTTA+TGG 0.144792 1:+35103090 MsG0180002227.01.T01:CDS
CCTTGCTGTCGATGAGCTTC+GGG 0.224314 1:+35102349 MsG0180002227.01.T01:CDS
TCCTTGCTGTCGATGAGCTT+CGG 0.225349 1:+35102348 MsG0180002227.01.T01:CDS
GCTGAAGAACAATATATTTC+AGG 0.255826 1:+35102842 MsG0180002227.01.T01:CDS
AGGAGTTCTGCTAGAAATAT+TGG 0.256259 1:+35102749 MsG0180002227.01.T01:CDS
TCCGTAACACTTCTTCTCTT+TGG 0.270638 1:-35102149 None:intergenic
CACTATGGTATCCCTGTTAC+TGG 0.278573 1:+35100582 MsG0180002227.01.T01:CDS
TAACACCTCAACACACTTCT+TGG 0.279936 1:-35102522 None:intergenic
AAGGATTATGTCACTCTGTT+TGG 0.282644 1:+35103259 MsG0180002227.01.T01:CDS
GGGTCTACTCTTAGACAATA+TGG 0.287852 1:+35103280 MsG0180002227.01.T01:CDS
TGATGTTGTGAGGAAGTATT+TGG 0.301076 1:+35103621 MsG0180002227.01.T01:CDS
GCCTCTGTATCTTGCTATTA+TGG 0.310483 1:+35100511 MsG0180002227.01.T01:CDS
GCGGTTAAGGTAACGACTTC+GGG 0.321297 1:-35098067 None:intergenic
ACGATTGGATGGTTCAAATA+AGG 0.329329 1:+35102729 MsG0180002227.01.T01:CDS
ATGATGTTGGTCCTCTTGTT+AGG 0.341685 1:+35102213 MsG0180002227.01.T01:CDS
GTATTACTCAATACAATTAA+TGG 0.346233 1:+35103673 MsG0180002227.01.T01:CDS
ATCACCTTTGCACTTAAATC+TGG 0.355159 1:-35103829 None:intergenic
AGGATTATGTCACTCTGTTT+GGG 0.358797 1:+35103260 MsG0180002227.01.T01:CDS
TGATGGAATAGCCCAGTAAC+AGG 0.360101 1:-35100594 None:intergenic
TCTTTGTTTACCATTTCAAT+AGG 0.365603 1:-35103885 None:intergenic
CTGCATTCAATACGTCAATA+AGG 0.371814 1:-35103651 None:intergenic
CTGGGCTATTCCATCATCGC+TGG 0.381288 1:+35100601 MsG0180002227.01.T01:CDS
GATTACTTATCTCATGGTAT+TGG 0.387487 1:+35103580 MsG0180002227.01.T01:CDS
ATCAACGGAGCCTTTGATAA+AGG 0.394639 1:-35103560 None:intergenic
AGAGGAGCAGTTCTCCTCTA+TGG 0.398120 1:+35103210 MsG0180002227.01.T01:CDS
CAGAACTGCTGGGGTCCTCC+TGG 0.403605 1:+35103129 MsG0180002227.01.T01:CDS
CCTTAACCACAAAACTCATC+TGG 0.405198 1:-35102274 None:intergenic
GAACATCAACAGTTTGTTGC+CGG 0.408299 1:-35103378 None:intergenic
GAGGATTTGTCCCTTGCAAA+TGG 0.411506 1:+35102188 MsG0180002227.01.T01:CDS
TGCTGGTTTCTTTATGGTTG+AGG 0.414308 1:+35103096 MsG0180002227.01.T01:CDS
CTAGCATCTCGTCATCCCTT+TGG 0.415640 1:-35102805 None:intergenic
AGAAGAAGTGTTACGGAGAA+TGG 0.418078 1:+35102155 MsG0180002227.01.T01:CDS
TTCCCTCTCGAAAGCCACTA+TGG 0.423302 1:+35100567 MsG0180002227.01.T01:CDS
GAACAATATATTTCAGGAGC+AGG 0.428115 1:+35102848 MsG0180002227.01.T01:CDS
ATCTGGCGAAGAAGCCCCTC+TGG 0.428907 1:-35102257 None:intergenic
TAAAATGACATCCGTGTTAG+AGG 0.436019 1:+35103192 MsG0180002227.01.T01:CDS
AGAATCTTCGTCAAATTCTT+CGG 0.437081 1:-35102894 None:intergenic
TCAAAACAAGGTAGCCGTAC+TGG 0.437846 1:+35098133 MsG0180002227.01.T01:CDS
AATATTGGGCAAACAGCAAT+TGG 0.441343 1:+35102764 MsG0180002227.01.T01:CDS
GGTCTACTCTTAGACAATAT+GGG 0.444730 1:+35103281 MsG0180002227.01.T01:CDS
GGAGTTCTGCTAGAAATATT+GGG 0.446464 1:+35102750 MsG0180002227.01.T01:CDS
GATAGAGTCCTCAGAACTGC+TGG 0.449546 1:+35103118 MsG0180002227.01.T01:CDS
GATATCAAACCCAGCGATGA+TGG 0.449574 1:-35100611 None:intergenic
CAACAAACTGTTGATGTTCT+CGG 0.449798 1:+35103382 MsG0180002227.01.T01:CDS
GTCTGGTAAGATTCAACAAA+AGG 0.453362 1:-35103058 None:intergenic
TCTAGGGATTCATGTGATCA+TGG 0.455365 1:+35102118 MsG0180002227.01.T01:intron
GCAAGGGATGCCACATAGTT+GGG 0.456841 1:-35103785 None:intergenic
GCTCTTCAAGCTTGACAAGA+AGG 0.458450 1:-35102448 None:intergenic
CCGAAGGCAGGGCTAGTGAC+TGG 0.460738 1:+35098103 MsG0180002227.01.T01:CDS
GAGGAGAATGGTGCAACATA+TGG 0.463704 1:-35103505 None:intergenic
TTTGAAATGGGCCGGCCAGA+GGG 0.467950 1:+35102242 MsG0180002227.01.T01:CDS
GGCAAGGGATGCCACATAGT+TGG 0.468607 1:-35103786 None:intergenic
TGCGGTTAAGGTAACGACTT+CGG 0.469973 1:-35098068 None:intergenic
CTTACAGTGGCCTATTGAAA+TGG 0.475442 1:+35103875 MsG0180002227.01.T01:CDS
GGCATTCTTCCAACAGAAGC+TGG 0.481790 1:-35103357 None:intergenic
AGATACAGAGGCGGTGGATG+TGG 0.485873 1:-35100500 None:intergenic
TTCGCGATCAAGTTAACGAT+TGG 0.488745 1:+35102714 MsG0180002227.01.T01:CDS
GTTGAGGTGTTAGAGCTTTG+CGG 0.497469 1:+35102533 MsG0180002227.01.T01:CDS
TCGGACGGAGGAAGGCTTGA+CGG 0.500914 1:-35100467 None:intergenic
CCAGTCACTAGCCCTGCCTT+CGG 0.510629 1:-35098103 None:intergenic
AGGATTTGTCCCTTGCAAAT+GGG 0.511180 1:+35102189 MsG0180002227.01.T01:CDS
TTTGGCGAACTGTTGCAATA+CGG 0.511432 1:-35102787 None:intergenic
GTCGGCCACACATCTTCTCC+TGG 0.511813 1:+35103234 MsG0180002227.01.T01:CDS
GTTGTGCTGAAGATATTTCA+AGG 0.513956 1:-35103036 None:intergenic
AGAGGCGGTGGATGTGGTGG+TGG 0.514620 1:-35100494 None:intergenic
ACCAAAGAGAAGAAGTGTTA+CGG 0.515422 1:+35102148 MsG0180002227.01.T01:CDS
CCTTCAGAGTATTCCTCTGA+AGG 0.515784 1:+35102631 MsG0180002227.01.T01:CDS
GGCCTTTCAATTGATCGGCA+AGG 0.518074 1:-35103802 None:intergenic
GCCTTTCAATTGATCGGCAA+GGG 0.519139 1:-35103801 None:intergenic
GGTGCAACATATGGAAAAGC+AGG 0.523673 1:-35103496 None:intergenic
TGGGCTATTCCATCATCGCT+GGG 0.525321 1:+35100602 MsG0180002227.01.T01:CDS
TTTCAACTTGATCAGCAACC+AGG 0.526849 1:-35103147 None:intergenic
GCTGAGGCCTTTCAATTGAT+CGG 0.527520 1:-35103807 None:intergenic
TCCGTTGATTACTTATCTCA+TGG 0.528160 1:+35103574 MsG0180002227.01.T01:CDS
CGATCAAGTTAACGATTGGA+TGG 0.530097 1:+35102718 MsG0180002227.01.T01:CDS
GAAGTACCACCAGCTTCTGT+TGG 0.532948 1:+35103348 MsG0180002227.01.T01:CDS
TGCTGAAGATATTTCAAGGT+CGG 0.534645 1:-35103032 None:intergenic
AGCTTCTGTTGGAAGAATGC+CGG 0.536493 1:+35103359 MsG0180002227.01.T01:CDS
GGCGAAGAAGCCCCTCTGGC+CGG 0.537239 1:-35102253 None:intergenic
TGGATGTGGTGGTGGACGAT+CGG 0.537793 1:-35100486 None:intergenic
TTGCTGTCGATGAGCTTCGG+GGG 0.538536 1:+35102351 MsG0180002227.01.T01:CDS
CAACATCATTCCCATTTGCA+AGG 0.541742 1:-35102199 None:intergenic
AGGGAGTCTCGCTTACACTT+TGG 0.543148 1:+35102868 MsG0180002227.01.T01:CDS
GAAGCTGGTGGTACTTCTCA+TGG 0.548105 1:-35103342 None:intergenic
TGTGGTGGTGGACGATCGGA+CGG 0.548537 1:-35100482 None:intergenic
GTTACGGAGAATGGTGATGG+TGG 0.548736 1:+35102164 MsG0180002227.01.T01:CDS
CTCACAATGCGACACACATC+AGG 0.554021 1:-35103535 None:intergenic
GATGCTAGAACAGCAGAGAA+AGG 0.554326 1:+35102820 MsG0180002227.01.T01:CDS
TTTGCACTTAAATCTGGCTG+AGG 0.555275 1:-35103823 None:intergenic
TTACGGAGAATGGTGATGGT+GGG 0.555386 1:+35102165 MsG0180002227.01.T01:CDS
CGTTACCTTAACCGCAAGGA+GGG 0.557104 1:+35098075 MsG0180002227.01.T01:CDS
GTGGACGATCGGACGGAGGA+AGG 0.558076 1:-35100475 None:intergenic
GGAGAATGGTGATGGTGGGG+AGG 0.558620 1:+35102169 MsG0180002227.01.T01:CDS
TCCAGTCGCACCTTCCAGTA+CGG 0.558947 1:-35098147 None:intergenic
ATAGAGTCCTCAGAACTGCT+GGG 0.560288 1:+35103119 MsG0180002227.01.T01:CDS
TCAGGTACCATGGAGGAGAA+TGG 0.560880 1:-35103517 None:intergenic
TTACCTTAACCGCAAGGAGG+GGG 0.562670 1:+35098077 MsG0180002227.01.T01:CDS
TATTGCAACAGTTCGCCAAA+GGG 0.562863 1:+35102790 MsG0180002227.01.T01:CDS
TTGAAATGGGCCGGCCAGAG+GGG 0.564740 1:+35102243 MsG0180002227.01.T01:CDS
TAAGGTAACGACTTCGGGCA+TGG 0.570077 1:-35098062 None:intergenic
TACGGAGAATGGTGATGGTG+GGG 0.570467 1:+35102166 MsG0180002227.01.T01:CDS
ATAGCAAGATACAGAGGCGG+TGG 0.571545 1:-35100506 None:intergenic
ATATGACAAGCACGATAAAG+AGG 0.572535 1:-35102938 None:intergenic
AGACAATATGGGCATGACAT+TGG 0.572728 1:+35103292 MsG0180002227.01.T01:CDS
ATAGTTGGGCTGCTTGTCGA+AGG 0.575484 1:-35103771 None:intergenic
TCCCTTGCCGATCAATTGAA+AGG 0.579012 1:+35103800 MsG0180002227.01.T01:CDS
CAGTAACAGGGATACCATAG+TGG 0.580222 1:-35100581 None:intergenic
AGTATTCACGAAACTTCTCT+CGG 0.584288 1:-35102979 None:intergenic
ATTGTGAGATCCTTTATCAA+AGG 0.584314 1:+35103550 MsG0180002227.01.T01:CDS
CACACATCTTCTCCTGGTGA+AGG 0.584480 1:+35103240 MsG0180002227.01.T01:CDS
CTTGCTGTCGATGAGCTTCG+GGG 0.585024 1:+35102350 MsG0180002227.01.T01:CDS
TGCTGTCGATGAGCTTCGGG+GGG 0.587389 1:+35102352 MsG0180002227.01.T01:CDS
AACAATATATTTCAGGAGCA+GGG 0.589178 1:+35102849 MsG0180002227.01.T01:CDS
CTTGCAAATGGGAATGATGT+TGG 0.589681 1:+35102200 MsG0180002227.01.T01:CDS
GTATTGCAACAGTTCGCCAA+AGG 0.590503 1:+35102789 MsG0180002227.01.T01:CDS
TGTTGCACCATTCTCCTCCA+TGG 0.591225 1:+35103510 MsG0180002227.01.T01:CDS
CGACAAGCAGCCCAACTATG+TGG 0.597104 1:+35103775 MsG0180002227.01.T01:CDS
CCCGAAGCTCATCGACAGCA+AGG 0.598968 1:-35102349 None:intergenic
TGTAACAGTCAAGTTTCTGA+AGG 0.602302 1:+35102560 MsG0180002227.01.T01:CDS
AACATCATTCCCATTTGCAA+GGG 0.603548 1:-35102198 None:intergenic
CCTTCAGAGGAATACTCTGA+AGG 0.607812 1:-35102631 None:intergenic
ACTATGGTATCCCTGTTACT+GGG 0.609844 1:+35100583 MsG0180002227.01.T01:CDS
ATGTGTGGCCGACTCCATAG+AGG 0.611530 1:-35103224 None:intergenic
GGAAAAGGAAGCTGAAATCG+AGG 0.612019 1:+35102295 MsG0180002227.01.T01:CDS
TCAAAAGCATGCCTAACAAG+AGG 0.612371 1:-35102224 None:intergenic
TCCTCTGAAGGCTCTCAAAG+TGG 0.618558 1:+35102643 MsG0180002227.01.T01:CDS
TACAGAGGCGGTGGATGTGG+TGG 0.619421 1:-35100497 None:intergenic
GTTACCTTAACCGCAAGGAG+GGG 0.622356 1:+35098076 MsG0180002227.01.T01:CDS
TACCATAGTGGCTTTCGAGA+GGG 0.624725 1:-35100569 None:intergenic
AACAAGGTAGCCGTACTGGA+AGG 0.625185 1:+35098137 MsG0180002227.01.T01:CDS
ACCATGAGATAAGTAATCAA+CGG 0.625244 1:-35103575 None:intergenic
GTAACTTAAAATTGTCACCA+TGG 0.629135 1:-35102409 None:intergenic
TCAGCCAGATTTAAGTGCAA+AGG 0.629183 1:+35103825 MsG0180002227.01.T01:CDS
CTGATCAAGTTGAAACAATG+TGG 0.635698 1:+35103155 MsG0180002227.01.T01:CDS
GGAGGACCCCAGCAGTTCTG+AGG 0.635860 1:-35103126 None:intergenic
TTATTCCGCATTGAAAACTG+TGG 0.636673 1:+35102589 MsG0180002227.01.T01:CDS
GCGACACACATCAGGTACCA+TGG 0.639961 1:-35103527 None:intergenic
GCAGTTCTCCTCTATGGAGT+CGG 0.640898 1:+35103216 MsG0180002227.01.T01:CDS
AGTGTTACGGAGAATGGTGA+TGG 0.644041 1:+35102161 MsG0180002227.01.T01:CDS
GGAGAACTGCTCCTCTAACA+CGG 0.645140 1:-35103203 None:intergenic
GAGTTGAAGAGTCAGCTCCA+TGG 0.646857 1:+35102392 MsG0180002227.01.T01:CDS
ATACCATAGTGGCTTTCGAG+AGG 0.648271 1:-35100570 None:intergenic
GCCACTTTGAGAGCCTTCAG+AGG 0.648980 1:-35102644 None:intergenic
TTACTCAATACAATTAATGG+TGG 0.652301 1:+35103676 MsG0180002227.01.T01:CDS
GGTGATCTTGAAAACGTCGA+GGG 0.652921 1:+35103846 MsG0180002227.01.T01:CDS
GAGTGACATAATCCTTCACC+AGG 0.654242 1:-35103252 None:intergenic
TCGAGGGACGCAGCTTACAG+TGG 0.655470 1:+35103862 MsG0180002227.01.T01:CDS
AAGTCGTTACCTTAACCGCA+AGG 0.659717 1:+35098071 MsG0180002227.01.T01:CDS
TAGAGTCCTCAGAACTGCTG+GGG 0.662834 1:+35103120 MsG0180002227.01.T01:CDS
CTTCACCAGGAGAAGATGTG+TGG 0.674846 1:-35103239 None:intergenic
TGAATGTCTTTGATGTTGTG+AGG 0.677996 1:+35103611 MsG0180002227.01.T01:CDS
GATGGAATAGCCCAGTAACA+GGG 0.678553 1:-35100593 None:intergenic
AGGTGATCTTGAAAACGTCG+AGG 0.679596 1:+35103845 MsG0180002227.01.T01:CDS
TCGTTACCTTAACCGCAAGG+AGG 0.685415 1:+35098074 MsG0180002227.01.T01:CDS
TCCATAATAGCAAGATACAG+AGG 0.686280 1:-35100512 None:intergenic
ACTGGAGTGAAGTCAAAACA+AGG 0.687185 1:+35098121 MsG0180002227.01.T01:CDS
GGTGGTGGACGATCGGACGG+AGG 0.692189 1:-35100479 None:intergenic
TGATCAAGTTGAAACAATGT+GGG 0.698008 1:+35103156 MsG0180002227.01.T01:CDS
GACGGAGGAAGGCTTGACGG+AGG 0.702834 1:-35100464 None:intergenic
CAACTTGATCAGCAACCAGG+AGG 0.705174 1:-35103144 None:intergenic
TTATTCTGTTAAGAAGAATG+TGG 0.707411 1:+35102481 MsG0180002227.01.T01:CDS
ATTCTTCCAACAGAAGCTGG+TGG 0.710384 1:-35103354 None:intergenic
AACAATGTGGGAGACAGCTG+TGG 0.714292 1:+35103168 MsG0180002227.01.T01:CDS
GATGTGCAAGACTCATTACG+AGG 0.737166 1:+35102319 MsG0180002227.01.T01:CDS
ATAATAGCAAGATACAGAGG+CGG 0.737373 1:-35100509 None:intergenic
AATGTCCAAGAAGTGTGTTG+AGG 0.745587 1:+35102517 MsG0180002227.01.T01:CDS
ACACACATCAGGTACCATGG+AGG 0.775847 1:-35103524 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTAAAAAAAAATAATTA+TGG + Chr1:35099317-35099336 MsG0180002227.01.T01:intron 0.0%
!! AAAAAAATAATTATGGATAA+TGG + Chr1:35099324-35099343 MsG0180002227.01.T01:intron 10.0%
!! TATATATATATATATGAAAG+AGG - Chr1:35098928-35098947 None:intergenic 10.0%
!! TTAAATGAAATAAATTACTA+AGG - Chr1:35101852-35101871 None:intergenic 10.0%
!!! ATTATTTGTTTTTTAATGTT+TGG + Chr1:35099592-35099611 MsG0180002227.01.T01:intron 10.0%
!!! TCTATTTGTTTTTTAAAAAA+TGG + Chr1:35099464-35099483 MsG0180002227.01.T01:intron 10.0%
!! ATTAATAGTGTTTATAAAAG+TGG - Chr1:35099004-35099023 None:intergenic 15.0%
!! TTAATAGTGTTTATAAAAGT+GGG - Chr1:35099003-35099022 None:intergenic 15.0%
!!! AAGATTATGAATTTTTAAAG+AGG - Chr1:35099264-35099283 None:intergenic 15.0%
!!! AGATTATGAATTTTTAAAGA+GGG - Chr1:35099263-35099282 None:intergenic 15.0%
!!! ATAATTTGTTAAAACAATTG+CGG + Chr1:35099390-35099409 MsG0180002227.01.T01:intron 15.0%
!!! TAACAATTTTAGATTGTTAA+TGG - Chr1:35098262-35098281 None:intergenic 15.0%
!!! TTCCTTGTTTAAAATAAAAA+TGG + Chr1:35098290-35098309 MsG0180002227.01.T01:intron 15.0%
!!! TTGTTTATTTTTGTTGAATT+TGG + Chr1:35102093-35102112 MsG0180002227.01.T01:intron 15.0%
!!! TTTTATTTAGTTATAGAACA+TGG - Chr1:35099183-35099202 None:intergenic 15.0%
!! AAACTAATGAGTCATTATTA+AGG + Chr1:35100095-35100114 MsG0180002227.01.T01:intron 20.0%
!! AATCAAAATGATCATGAATT+GGG - Chr1:35101124-35101143 None:intergenic 20.0%
!! ACATTATAATTACACAACAA+TGG + Chr1:35101898-35101917 MsG0180002227.01.T01:intron 20.0%
!! GTATTACTCAATACAATTAA+TGG + Chr1:35103673-35103692 MsG0180002227.01.T01:CDS 20.0%
!! TAATAGTGTTTATAAAAGTG+GGG - Chr1:35099002-35099021 None:intergenic 20.0%
!! TGGCTTAAAAACAAATATTA+TGG + Chr1:35099484-35099503 MsG0180002227.01.T01:intron 20.0%
!!! ACTCATTAGTTTTAAAAGAT+TGG - Chr1:35100087-35100106 None:intergenic 20.0%
!!! CACCATTTTTATTTTAAACA+AGG - Chr1:35098295-35098314 None:intergenic 20.0%
!!! GAAAGTACAAAATCTTATAT+AGG + Chr1:35100024-35100043 MsG0180002227.01.T01:intron 20.0%
!!! TAAATTTGTGACTGTTTTTT+TGG + Chr1:35100637-35100656 MsG0180002227.01.T01:intron 20.0%
!!! TAATTTTAGTCTCTTATATG+TGG + Chr1:35099847-35099866 MsG0180002227.01.T01:intron 20.0%
!!! TTCTATTTTCTATTTTCTGA+TGG + Chr1:35102013-35102032 MsG0180002227.01.T01:intron 20.0%
!!! TTGTTTTTTAATGTTTGGAT+GGG + Chr1:35099597-35099616 MsG0180002227.01.T01:intron 20.0%
!!! TTTGGTTTGTTATTGTTTTA+AGG + Chr1:35101012-35101031 MsG0180002227.01.T01:intron 20.0%
!!! TTTGTTTTTTAATGTTTGGA+TGG + Chr1:35099596-35099615 MsG0180002227.01.T01:intron 20.0%
!!! TTTTAAACAAAAAATGCCAA+TGG - Chr1:35099883-35099902 None:intergenic 20.0%
! AAATACAAATCGTAACAACT+AGG - Chr1:35100994-35101013 None:intergenic 25.0%
! AAATATTATGGAACTATCCA+CGG + Chr1:35099496-35099515 MsG0180002227.01.T01:intron 25.0%
! AAATTGCATATTGGTAAAAC+AGG + Chr1:35101390-35101409 MsG0180002227.01.T01:intron 25.0%
! AAGGTAAACAAGCAATTAAT+GGG + Chr1:35101921-35101940 MsG0180002227.01.T01:intron 25.0%
! AAGTACTATATGTACTCTTA+GGG + Chr1:35101043-35101062 MsG0180002227.01.T01:intron 25.0%
! AATAGTGTTTATAAAAGTGG+GGG - Chr1:35099001-35099020 None:intergenic 25.0%
! AATTGCATATTGGTAAAACA+GGG + Chr1:35101391-35101410 MsG0180002227.01.T01:intron 25.0%
! AATTGTAGGATGAATAGAAT+GGG + Chr1:35099675-35099694 MsG0180002227.01.T01:intron 25.0%
! ACTCATAAGATTATTATCCT+AGG + Chr1:35098334-35098353 MsG0180002227.01.T01:intron 25.0%
! ATAAGATTATTATCCTAGGT+CGG + Chr1:35098338-35098357 MsG0180002227.01.T01:intron 25.0%
! ATAGAGAAGTTAATCGTAAA+TGG - Chr1:35101782-35101801 None:intergenic 25.0%
! ATATATCCCTTATCAGTATA+TGG + Chr1:35098802-35098821 MsG0180002227.01.T01:intron 25.0%
! ATCATACTACATTTATGAAG+TGG - Chr1:35101226-35101245 None:intergenic 25.0%
! ATTCATAATCTTGTGCATAA+TGG + Chr1:35099272-35099291 MsG0180002227.01.T01:intron 25.0%
! CAATCAAAATGATCATGAAT+TGG - Chr1:35101125-35101144 None:intergenic 25.0%
! CCTCAATAGAAAAAGAAAAA+CGG + Chr1:35098858-35098877 MsG0180002227.01.T01:intron 25.0%
! TAATATAGTACCTGTGAAAT+TGG - Chr1:35100754-35100773 None:intergenic 25.0%
! TACAAACTTGAACTCAAATA+AGG - Chr1:35100699-35100718 None:intergenic 25.0%
! TATAATTACACAACAATGGA+AGG + Chr1:35101902-35101921 MsG0180002227.01.T01:intron 25.0%
! TATTACAAGTAAGAGACTTA+TGG + Chr1:35100769-35100788 MsG0180002227.01.T01:intron 25.0%
! TTACTCAATACAATTAATGG+TGG + Chr1:35103676-35103695 MsG0180002227.01.T01:CDS 25.0%
! TTATTCTGTTAAGAAGAATG+TGG + Chr1:35102481-35102500 MsG0180002227.01.T01:CDS 25.0%
!! AAAGTACTATATGTACTCTT+AGG + Chr1:35101042-35101061 MsG0180002227.01.T01:intron 25.0%
!! AAATACTCACTCTGATTTTA+AGG + Chr1:35099743-35099762 MsG0180002227.01.T01:intron 25.0%
!! ACAACTCTAACAAATTTTCA+CGG + Chr1:35099425-35099444 MsG0180002227.01.T01:intron 25.0%
!! ACAACTGTAACAAATTTTCA+CGG + Chr1:35099352-35099371 MsG0180002227.01.T01:intron 25.0%
!! AGTTGTTACGATTTGTATTT+TGG + Chr1:35100994-35101013 MsG0180002227.01.T01:intron 25.0%
!! GTTTTACCAATATGCAATTT+TGG - Chr1:35101390-35101409 None:intergenic 25.0%
!! TGTCATATTCATGATTTTCT+AGG + Chr1:35102953-35102972 MsG0180002227.01.T01:CDS 25.0%
!! TTTGTTGAATTTGGTTTCTA+GGG + Chr1:35102102-35102121 MsG0180002227.01.T01:intron 25.0%
!! TTTTCTATTTTCTGATGGAA+AGG + Chr1:35102018-35102037 MsG0180002227.01.T01:intron 25.0%
!!! GCACACGTATTTATTTTTTT+GGG + Chr1:35099532-35099551 MsG0180002227.01.T01:intron 25.0%
!!! TGCACACGTATTTATTTTTT+TGG + Chr1:35099531-35099550 MsG0180002227.01.T01:intron 25.0%
!!! TTATTTTAACCTACATGTGT+TGG - Chr1:35099133-35099152 None:intergenic 25.0%
!!! TTTTGTTGAATTTGGTTTCT+AGG + Chr1:35102101-35102120 MsG0180002227.01.T01:intron 25.0%
AACAACTAGGCTAAAATCTT+CGG - Chr1:35100981-35101000 None:intergenic 30.0%
AACAATATATTTCAGGAGCA+GGG + Chr1:35102849-35102868 MsG0180002227.01.T01:CDS 30.0%
AATGCTAAAATTATTGTGCC+AGG + Chr1:35099923-35099942 MsG0180002227.01.T01:intron 30.0%
ACCATGAGATAAGTAATCAA+CGG - Chr1:35103578-35103597 None:intergenic 30.0%
AGAATCTTCGTCAAATTCTT+CGG - Chr1:35102897-35102916 None:intergenic 30.0%
AGATTGAGTTCAATGAGTTA+CGG - Chr1:35101261-35101280 None:intergenic 30.0%
AGTACTATATGTACTCTTAG+GGG + Chr1:35101044-35101063 MsG0180002227.01.T01:intron 30.0%
ATAGAAAGTTGGATCTACAT+TGG - Chr1:35098720-35098739 None:intergenic 30.0%
ATGCTAAAATTATTGTGCCA+GGG + Chr1:35099924-35099943 MsG0180002227.01.T01:intron 30.0%
ATGTGGTTCAAAATATCCAT+TGG + Chr1:35099864-35099883 MsG0180002227.01.T01:intron 30.0%
ATTGTGAGATCCTTTATCAA+AGG + Chr1:35103550-35103569 MsG0180002227.01.T01:CDS 30.0%
ATTTGGGGATTACAACAATT+TGG - Chr1:35100277-35100296 None:intergenic 30.0%
CAATTTGAGCAAAAAATGTC+TGG - Chr1:35103078-35103097 None:intergenic 30.0%
GAAGGTAAACAAGCAATTAA+TGG + Chr1:35101920-35101939 MsG0180002227.01.T01:intron 30.0%
GAATTGTAGGATGAATAGAA+TGG + Chr1:35099674-35099693 MsG0180002227.01.T01:intron 30.0%
GACCCATTTCTTAATACATA+CGG - Chr1:35099810-35099829 None:intergenic 30.0%
GACCGTATGTATTAAGAAAT+GGG + Chr1:35099805-35099824 MsG0180002227.01.T01:intron 30.0%
GATTACTTATCTCATGGTAT+TGG + Chr1:35103580-35103599 MsG0180002227.01.T01:CDS 30.0%
GATTGTTAGGATAATGAGTT+CGG - Chr1:35100804-35100823 None:intergenic 30.0%
GCTGAAGAACAATATATTTC+AGG + Chr1:35102842-35102861 MsG0180002227.01.T01:CDS 30.0%
GTAACTTAAAATTGTCACCA+TGG - Chr1:35102412-35102431 None:intergenic 30.0%
GTACCATTCATTCATTCATT+CGG + Chr1:35101590-35101609 MsG0180002227.01.T01:intron 30.0%
GTGAGTATTTCCTTATCATT+TGG - Chr1:35099733-35099752 None:intergenic 30.0%
GTTATCTTGATATCTTGTAC+TGG + Chr1:35101074-35101093 MsG0180002227.01.T01:intron 30.0%
TAGTTAAACAAAAAACACGC+CGG + Chr1:35101472-35101491 MsG0180002227.01.T01:intron 30.0%
TCGCTTCTTTATGTTTATTG+AGG - Chr1:35098235-35098254 None:intergenic 30.0%
TGAAATAATCACAGAAGAGA+GGG - Chr1:35101647-35101666 None:intergenic 30.0%
TGATTTCATAGGGATGATTT+GGG - Chr1:35100293-35100312 None:intergenic 30.0%
TTTAATGTTTGGATGGGTAA+GGG + Chr1:35099603-35099622 MsG0180002227.01.T01:intron 30.0%
TTTATGTTTATTGAGGTGTG+AGG - Chr1:35098228-35098247 None:intergenic 30.0%
TTTGGGGATTACAACAATTT+GGG - Chr1:35100276-35100295 None:intergenic 30.0%
! AATTTTGTCACATGATGAGA+AGG - Chr1:35100836-35100855 None:intergenic 30.0%
! CATCATATACACATTTTTCG+TGG - Chr1:35099993-35100012 None:intergenic 30.0%
! TACTAATCTTTTTCCGAAGT+TGG + Chr1:35100900-35100919 MsG0180002227.01.T01:intron 30.0%
! TCAATGTGCGATTTTATTAC+AGG - Chr1:35102686-35102705 None:intergenic 30.0%
! TCTTTGATTTCATCCAACTT+CGG - Chr1:35100916-35100935 None:intergenic 30.0%
! TGTTGGTTAATCTCTTGAAA+TGG + Chr1:35102068-35102087 MsG0180002227.01.T01:intron 30.0%
! TTTTAATGTTTGGATGGGTA+AGG + Chr1:35099602-35099621 MsG0180002227.01.T01:intron 30.0%
! TTTTCAATGCGGAATAAAAC+TGG - Chr1:35102586-35102605 None:intergenic 30.0%
!! ACGACTTTAGTTCTATCAAT+GGG + Chr1:35099064-35099083 MsG0180002227.01.T01:intron 30.0%
!! CCGTTTTTCTTTTTCTATTG+AGG - Chr1:35098861-35098880 None:intergenic 30.0%
!! TCAAATTGCTGGTTTCTTTA+TGG + Chr1:35103090-35103109 MsG0180002227.01.T01:CDS 30.0%
!! TGATCAAGTTGAAACAATGT+GGG + Chr1:35103156-35103175 MsG0180002227.01.T01:CDS 30.0%
!!! AATTTTAAGTTACAGCAGGT+TGG + Chr1:35102419-35102438 MsG0180002227.01.T01:CDS 30.0%
!!! ACATTTTTTGCTCAAATTGC+TGG + Chr1:35103079-35103098 MsG0180002227.01.T01:CDS 30.0%
!!! ATTCCTTTTTTATCGACACT+TGG - Chr1:35103423-35103442 None:intergenic 30.0%
!!! GGTTTTATTGTTTTGCTGTT+TGG + Chr1:35100658-35100677 MsG0180002227.01.T01:intron 30.0%
!!! TGACAATTTTAAGTTACAGC+AGG + Chr1:35102415-35102434 MsG0180002227.01.T01:CDS 30.0%
AAAAATCACAGGCTCTTTCA+AGG - Chr1:35103750-35103769 None:intergenic 35.0%
AAAAATGGTGAAGTGACAAG+TGG + Chr1:35098305-35098324 MsG0180002227.01.T01:intron 35.0%
AACATCATTCCCATTTGCAA+GGG - Chr1:35102201-35102220 None:intergenic 35.0%
AAGGATTATGTCACTCTGTT+TGG + Chr1:35103259-35103278 MsG0180002227.01.T01:CDS 35.0%
AAGGTAATTGCGTGATTGTT+AGG - Chr1:35100817-35100836 None:intergenic 35.0%
AATATTGGGCAAACAGCAAT+TGG + Chr1:35102764-35102783 MsG0180002227.01.T01:CDS 35.0%
ACGATTGGATGGTTCAAATA+AGG + Chr1:35102729-35102748 MsG0180002227.01.T01:CDS 35.0%
AGAACTAAAGTCGTGTGAAT+TGG - Chr1:35099058-35099077 None:intergenic 35.0%
AGATAGTTCAATGTGCTCAT+CGG + Chr1:35098573-35098592 MsG0180002227.01.T01:intron 35.0%
AGCACATTGAACTATCTATG+TGG - Chr1:35098570-35098589 None:intergenic 35.0%
AGCCAACAATATTTGTATGG+AGG + Chr1:35099782-35099801 MsG0180002227.01.T01:intron 35.0%
AGCTGTCCATATACTGATAA+GGG - Chr1:35098811-35098830 None:intergenic 35.0%
AGGAGTTCTGCTAGAAATAT+TGG + Chr1:35102749-35102768 MsG0180002227.01.T01:CDS 35.0%
AGGATTATGTCACTCTGTTT+GGG + Chr1:35103260-35103279 MsG0180002227.01.T01:CDS 35.0%
AGTATTCACGAAACTTCTCT+CGG - Chr1:35102982-35103001 None:intergenic 35.0%
ATAATAGCAAGATACAGAGG+CGG - Chr1:35100512-35100531 None:intergenic 35.0%
ATATGACAAGCACGATAAAG+AGG - Chr1:35102941-35102960 None:intergenic 35.0%
ATCACCTTTGCACTTAAATC+TGG - Chr1:35103832-35103851 None:intergenic 35.0%
ATTCACATAAGTGGGTAGTT+TGG + Chr1:35098968-35098987 MsG0180002227.01.T01:intron 35.0%
CAACAAACTGTTGATGTTCT+CGG + Chr1:35103382-35103401 MsG0180002227.01.T01:CDS 35.0%
CCACAACCAAAATTGCATAT+TGG + Chr1:35101381-35101400 MsG0180002227.01.T01:intron 35.0%
CTGCATTCAATACGTCAATA+AGG - Chr1:35103654-35103673 None:intergenic 35.0%
CTTCGGAAAAAGATTAGTAC+AGG - Chr1:35100899-35100918 None:intergenic 35.0%
GAACAATATATTTCAGGAGC+AGG + Chr1:35102848-35102867 MsG0180002227.01.T01:CDS 35.0%
GAATAGAATGGGTATGTCAT+AGG + Chr1:35099686-35099705 MsG0180002227.01.T01:intron 35.0%
GATCGGATAACATGAATTGT+AGG + Chr1:35099661-35099680 MsG0180002227.01.T01:intron 35.0%
GATTTCATAGGGATGATTTG+GGG - Chr1:35100292-35100311 None:intergenic 35.0%
GCCAACAATATTTGTATGGA+GGG + Chr1:35099783-35099802 MsG0180002227.01.T01:intron 35.0%
GGACCGTATGTATTAAGAAA+TGG + Chr1:35099804-35099823 MsG0180002227.01.T01:intron 35.0%
GGAGTTCTGCTAGAAATATT+GGG + Chr1:35102750-35102769 MsG0180002227.01.T01:CDS 35.0%
GGTCTACTCTTAGACAATAT+GGG + Chr1:35103281-35103300 MsG0180002227.01.T01:CDS 35.0%
GTACTATATGTACTCTTAGG+GGG + Chr1:35101045-35101064 MsG0180002227.01.T01:intron 35.0%
GTATTAAGAAATGGGTCAAG+TGG + Chr1:35099813-35099832 MsG0180002227.01.T01:intron 35.0%
GTCTGGTAAGATTCAACAAA+AGG - Chr1:35103061-35103080 None:intergenic 35.0%
GTGAAATAATCACAGAAGAG+AGG - Chr1:35101648-35101667 None:intergenic 35.0%
GTGATTTCATAGGGATGATT+TGG - Chr1:35100294-35100313 None:intergenic 35.0%
GTGTATAATTCGAGCAGAAT+AGG - Chr1:35101806-35101825 None:intergenic 35.0%
GTTGTGCTGAAGATATTTCA+AGG - Chr1:35103039-35103058 None:intergenic 35.0%
GTTGTTATGAGCAAGGATAT+TGG - Chr1:35101304-35101323 None:intergenic 35.0%
TAAAATGACATCCGTGTTAG+AGG + Chr1:35103192-35103211 MsG0180002227.01.T01:CDS 35.0%
TACAAGTAAGAGACTTATGG+CGG + Chr1:35100772-35100791 MsG0180002227.01.T01:intron 35.0%
TACTATATGTACTCTTAGGG+GGG + Chr1:35101046-35101065 MsG0180002227.01.T01:intron 35.0%
TAGCTGTCCATATACTGATA+AGG - Chr1:35098812-35098831 None:intergenic 35.0%
TCCATAATAGCAAGATACAG+AGG - Chr1:35100515-35100534 None:intergenic 35.0%
TCCCTCCATACAAATATTGT+TGG - Chr1:35099787-35099806 None:intergenic 35.0%
TCCTCTTCATCTGTTTCAAT+CGG + Chr1:35100183-35100202 MsG0180002227.01.T01:intron 35.0%
TGAATGTCTTTGATGTTGTG+AGG + Chr1:35103611-35103630 MsG0180002227.01.T01:CDS 35.0%
TGCTGAAGATATTTCAAGGT+CGG - Chr1:35103035-35103054 None:intergenic 35.0%
TGGGGTTGAAATCAGATTAA+GGG - Chr1:35100257-35100276 None:intergenic 35.0%
TGTAACAGTCAAGTTTCTGA+AGG + Chr1:35102560-35102579 MsG0180002227.01.T01:CDS 35.0%
TTATTCCGCATTGAAAACTG+TGG + Chr1:35102589-35102608 MsG0180002227.01.T01:CDS 35.0%
TTCATTCATTCATTCGGCAA+CGG + Chr1:35101596-35101615 MsG0180002227.01.T01:intron 35.0%
TTGCCGAATGAATGAATGAA+TGG - Chr1:35101596-35101615 None:intergenic 35.0%
TTGGATGAAATCAAAGACTG+TGG + Chr1:35100919-35100938 MsG0180002227.01.T01:intron 35.0%
TTGGGGATTACAACAATTTG+GGG - Chr1:35100275-35100294 None:intergenic 35.0%
TTGGGGTTGAAATCAGATTA+AGG - Chr1:35100258-35100277 None:intergenic 35.0%
TTGTCGAAGGAAAAAATCAC+AGG - Chr1:35103761-35103780 None:intergenic 35.0%
! ACCAACACTGAAATCGATTT+GGG - Chr1:35100374-35100393 None:intergenic 35.0%
! AGGGAGAACTAATACTTTTC+TGG + Chr1:35098183-35098202 MsG0180002227.01.T01:intron 35.0%
! AGTATTAGTTCTCCCTGAAA+AGG - Chr1:35098179-35098198 None:intergenic 35.0%
! CAAATCCACAGTTTTCAATG+CGG - Chr1:35102597-35102616 None:intergenic 35.0%
! CTATTTTCTGATGGAAAGGA+GGG + Chr1:35102022-35102041 MsG0180002227.01.T01:intron 35.0%
! GGGAGAACTAATACTTTTCT+GGG + Chr1:35098184-35098203 MsG0180002227.01.T01:intron 35.0%
! TCCGTTGATTACTTATCTCA+TGG + Chr1:35103574-35103593 MsG0180002227.01.T01:CDS 35.0%
! TCTATTTTCTGATGGAAAGG+AGG + Chr1:35102021-35102040 MsG0180002227.01.T01:intron 35.0%
!! ACCAAAGAGAAGAAGTGTTA+CGG + Chr1:35102148-35102167 MsG0180002227.01.T01:CDS 35.0%
!! CACGACTTTAGTTCTATCAA+TGG + Chr1:35099063-35099082 MsG0180002227.01.T01:intron 35.0%
!! CTGATCAAGTTGAAACAATG+TGG + Chr1:35103155-35103174 MsG0180002227.01.T01:CDS 35.0%
!! GAGTTTTGTGGTTAAGGAAA+AGG + Chr1:35102280-35102299 MsG0180002227.01.T01:CDS 35.0%
!! GTGCAAATTTGTTATATCCG+TGG - Chr1:35099516-35099535 None:intergenic 35.0%
!! TCTATCGCTTTTGACATAGT+GGG + Chr1:35098449-35098468 MsG0180002227.01.T01:intron 35.0%
!! TGACCAAGTGTCGATAAAAA+AGG + Chr1:35103417-35103436 MsG0180002227.01.T01:CDS 35.0%
!! TGATGTTGTGAGGAAGTATT+TGG + Chr1:35103621-35103640 MsG0180002227.01.T01:CDS 35.0%
!! TGTTAGGCATGCTTTTGAAA+TGG + Chr1:35102229-35102248 MsG0180002227.01.T01:CDS 35.0%
!! TTCTATCGCTTTTGACATAG+TGG + Chr1:35098448-35098467 MsG0180002227.01.T01:intron 35.0%
!!! CCAATATGCAATTTTGGTTG+TGG - Chr1:35101384-35101403 None:intergenic 35.0%
!!! GTTAGGCATGCTTTTGAAAT+GGG + Chr1:35102230-35102249 MsG0180002227.01.T01:CDS 35.0%
!!! TATTGTTTTGCTGTTTGGCT+TGG + Chr1:35100663-35100682 MsG0180002227.01.T01:intron 35.0%
AAAAAGGGGAAAGAGAGAGA+TGG + Chr1:35098422-35098441 MsG0180002227.01.T01:intron 40.0%
AAAAGGGGAAAGAGAGAGAT+GGG + Chr1:35098423-35098442 MsG0180002227.01.T01:intron 40.0%
AAGAACTGCCATAACACAGA+GGG - Chr1:35100439-35100458 None:intergenic 40.0%
ACCGATTGAAACAGATGAAG+AGG - Chr1:35100187-35100206 None:intergenic 40.0%
ACTATGGTATCCCTGTTACT+GGG + Chr1:35100583-35100602 MsG0180002227.01.T01:CDS 40.0%
ACTGGAGTGAAGTCAAAACA+AGG + Chr1:35098121-35098140 MsG0180002227.01.T01:CDS 40.0%
AGACAATATGGGCATGACAT+TGG + Chr1:35103292-35103311 MsG0180002227.01.T01:CDS 40.0%
AGGATTTGTCCCTTGCAAAT+GGG + Chr1:35102189-35102208 MsG0180002227.01.T01:CDS 40.0%
AGGCTAAAATCTTCGGCATA+TGG - Chr1:35100974-35100993 None:intergenic 40.0%
AGTGAGAGTGAAGAGAAGAA+AGG - Chr1:35101706-35101725 None:intergenic 40.0%
ATATGAATTCTCGAGAGGAG+AGG - Chr1:35098786-35098805 None:intergenic 40.0%
ATCAACGGAGCCTTTGATAA+AGG - Chr1:35103563-35103582 None:intergenic 40.0%
ATGAGTTACGGAGGTTCAAA+AGG - Chr1:35101249-35101268 None:intergenic 40.0%
ATGATGTTGGTCCTCTTGTT+AGG + Chr1:35102213-35102232 MsG0180002227.01.T01:CDS 40.0%
CAACATCATTCCCATTTGCA+AGG - Chr1:35102202-35102221 None:intergenic 40.0%
CACAACGACACAATTATCAG+GGG - Chr1:35098525-35098544 None:intergenic 40.0%
CCAACTTTCTATTCACTCGT+GGG + Chr1:35098728-35098747 MsG0180002227.01.T01:intron 40.0%
CCTTAACCACAAAACTCATC+TGG - Chr1:35102277-35102296 None:intergenic 40.0%
CGATCAAGTTAACGATTGGA+TGG + Chr1:35102718-35102737 MsG0180002227.01.T01:CDS 40.0%
CGGAGCCAACAATATTTGTA+TGG + Chr1:35099779-35099798 MsG0180002227.01.T01:intron 40.0%
CTGGTCTCAAACTATGGATT+AGG + Chr1:35101093-35101112 MsG0180002227.01.T01:intron 40.0%
CTTACAGTGGCCTATTGAAA+TGG + Chr1:35103875-35103894 MsG0180002227.01.T01:CDS 40.0%
CTTGCAAATGGGAATGATGT+TGG + Chr1:35102200-35102219 MsG0180002227.01.T01:CDS 40.0%
GACCAACACTGAAATCGATT+TGG - Chr1:35100375-35100394 None:intergenic 40.0%
GCACAACGACACAATTATCA+GGG - Chr1:35098526-35098545 None:intergenic 40.0%
GCTCACTCATTCACATAAGT+GGG + Chr1:35098960-35098979 MsG0180002227.01.T01:intron 40.0%
GGCGACATGAAACAAAAAAG+GGG + Chr1:35098408-35098427 MsG0180002227.01.T01:intron 40.0%
GGGAAGAAGGTGATTTCATA+GGG - Chr1:35100303-35100322 None:intergenic 40.0%
GGGATATATGAATTCTCGAG+AGG - Chr1:35098791-35098810 None:intergenic 40.0%
GGGCGACATGAAACAAAAAA+GGG + Chr1:35098407-35098426 MsG0180002227.01.T01:intron 40.0%
GGGTCTACTCTTAGACAATA+TGG + Chr1:35103280-35103299 MsG0180002227.01.T01:CDS 40.0%
GGTAAAACAGTGGAGATGAT+CGG + Chr1:35099644-35099663 MsG0180002227.01.T01:intron 40.0%
GGTTGAAATCAGATTAAGGG+TGG - Chr1:35100254-35100273 None:intergenic 40.0%
GTCTGTGAAGATACGTTGTT+AGG - Chr1:35098888-35098907 None:intergenic 40.0%
TAACACCTCAACACACTTCT+TGG - Chr1:35102525-35102544 None:intergenic 40.0%
TAGAATGGGTATGTCATAGG+AGG + Chr1:35099689-35099708 MsG0180002227.01.T01:intron 40.0%
TATTGCAACAGTTCGCCAAA+GGG + Chr1:35102790-35102809 MsG0180002227.01.T01:CDS 40.0%
TCAGCCAGATTTAAGTGCAA+AGG + Chr1:35103825-35103844 MsG0180002227.01.T01:CDS 40.0%
TCCAACTTTCTATTCACTCG+TGG + Chr1:35098727-35098746 MsG0180002227.01.T01:intron 40.0%
TCCAGAAGAACCAATTTCAC+AGG + Chr1:35100741-35100760 MsG0180002227.01.T01:intron 40.0%
TCCGTAACACTTCTTCTCTT+TGG - Chr1:35102152-35102171 None:intergenic 40.0%
TCTAGGGATTCATGTGATCA+TGG + Chr1:35102118-35102137 MsG0180002227.01.T01:intron 40.0%
TGCATATTGGTAAAACAGGG+TGG + Chr1:35101394-35101413 MsG0180002227.01.T01:intron 40.0%
TGTACTTCTCCTGTTTGAAC+CGG + Chr1:35098640-35098659 MsG0180002227.01.T01:intron 40.0%
TTCGCGATCAAGTTAACGAT+TGG + Chr1:35102714-35102733 MsG0180002227.01.T01:CDS 40.0%
TTGAAACCAAACTTCTCCTC+AGG + Chr1:35098666-35098685 MsG0180002227.01.T01:intron 40.0%
TTGAGTTCAATGAGTTACGG+AGG - Chr1:35101258-35101277 None:intergenic 40.0%
TTTCAACTTGATCAGCAACC+AGG - Chr1:35103150-35103169 None:intergenic 40.0%
TTTGCACTTAAATCTGGCTG+AGG - Chr1:35103826-35103845 None:intergenic 40.0%
TTTGGCGAACTGTTGCAATA+CGG - Chr1:35102790-35102809 None:intergenic 40.0%
! AATGTCCAAGAAGTGTGTTG+AGG + Chr1:35102517-35102536 MsG0180002227.01.T01:CDS 40.0%
! ACCTGTGAAATTGGTTCTTC+TGG - Chr1:35100745-35100764 None:intergenic 40.0%
! AGAAGTTTGGTTTCAAACCC+CGG - Chr1:35098662-35098681 None:intergenic 40.0%
! AGAGAGCACGTTAATGACTT+TGG - Chr1:35099965-35099984 None:intergenic 40.0%
! ATTAGTTCTCCCTGAAAAGG+AGG - Chr1:35098176-35098195 None:intergenic 40.0%
! ATTTGGGGTTGAACGAGATT+TGG - Chr1:35100325-35100344 None:intergenic 40.0%
! CTTGTACTGGTCTCAAACTA+TGG + Chr1:35101087-35101106 MsG0180002227.01.T01:intron 40.0%
! GACATGTGTTGTTATGAGCA+AGG - Chr1:35101311-35101330 None:intergenic 40.0%
! GTCGAAAAAGGGGTTTGTTT+GGG - Chr1:35101677-35101696 None:intergenic 40.0%
! TCAAAAGCATGCCTAACAAG+AGG - Chr1:35102227-35102246 None:intergenic 40.0%
! TTTGGGGTTGAACGAGATTT+GGG - Chr1:35100324-35100343 None:intergenic 40.0%
!! AAAGGTACCTGGTCGAAAAA+GGG - Chr1:35101688-35101707 None:intergenic 40.0%
!! AGAAGAAGTGTTACGGAGAA+TGG + Chr1:35102155-35102174 MsG0180002227.01.T01:CDS 40.0%
!! CAACACTGAAATCGATTTGG+GGG - Chr1:35100372-35100391 None:intergenic 40.0%
!! CCAACACTGAAATCGATTTG+GGG - Chr1:35100373-35100392 None:intergenic 40.0%
!! CCAGATGAGTTTTGTGGTTA+AGG + Chr1:35102274-35102293 MsG0180002227.01.T01:CDS 40.0%
!! GAACATCAACAGTTTGTTGC+CGG - Chr1:35103381-35103400 None:intergenic 40.0%
!! GATGAGAGCACCAAATGATA+AGG + Chr1:35099720-35099739 MsG0180002227.01.T01:intron 40.0%
!! GCCTCTGTATCTTGCTATTA+TGG + Chr1:35100511-35100530 MsG0180002227.01.T01:CDS 40.0%
!! TATGTCATAGGAGGTGTTCA+AGG + Chr1:35099698-35099717 MsG0180002227.01.T01:intron 40.0%
!! TGCTGGTTTCTTTATGGTTG+AGG + Chr1:35103096-35103115 MsG0180002227.01.T01:CDS 40.0%
!! TTGCACACATCGACTTTGAA+TGG - Chr1:35100873-35100892 None:intergenic 40.0%
!!! CACTCTGATTTTAAGGCTAG+AGG + Chr1:35099750-35099769 MsG0180002227.01.T01:intron 40.0%
!!! GATTTTAAGGCTAGAGGCAA+TGG + Chr1:35099756-35099775 MsG0180002227.01.T01:intron 40.0%
AAACCAAACTTCTCCTCAGG+AGG + Chr1:35098669-35098688 MsG0180002227.01.T01:intron 45.0%
AAAGGGGAAAGAGAGAGATG+GGG + Chr1:35098424-35098443 MsG0180002227.01.T01:intron 45.0%
AAGTCGTTACCTTAACCGCA+AGG + Chr1:35098071-35098090 MsG0180002227.01.T01:CDS 45.0%
ACATGGTGAAGGTGATTGAG+AGG - Chr1:35100218-35100237 None:intergenic 45.0%
ACCACTGTTCCAACACATGT+AGG + Chr1:35099121-35099140 MsG0180002227.01.T01:intron 45.0%
ACCTACATGTGTTGGAACAG+TGG - Chr1:35099125-35099144 None:intergenic 45.0%
AGAACTGCCATAACACAGAG+GGG - Chr1:35100438-35100457 None:intergenic 45.0%
AGAGGTGATCTCGTAGTTCT+TGG - Chr1:35098910-35098929 None:intergenic 45.0%
AGCTTCTGTTGGAAGAATGC+CGG + Chr1:35103359-35103378 MsG0180002227.01.T01:CDS 45.0%
AGGTGATCTTGAAAACGTCG+AGG + Chr1:35103845-35103864 MsG0180002227.01.T01:CDS 45.0%
AGTGTTACGGAGAATGGTGA+TGG + Chr1:35102161-35102180 MsG0180002227.01.T01:CDS 45.0%
ATACCATAGTGGCTTTCGAG+AGG - Chr1:35100573-35100592 None:intergenic 45.0%
ATAGAGTCCTCAGAACTGCT+GGG + Chr1:35103119-35103138 MsG0180002227.01.T01:CDS 45.0%
ATGTTTGGATGGGTAAGGGT+TGG + Chr1:35099607-35099626 MsG0180002227.01.T01:intron 45.0%
ATTCTTCCAACAGAAGCTGG+TGG - Chr1:35103357-35103376 None:intergenic 45.0%
CAATGGATACGACATGGTGA+AGG - Chr1:35100229-35100248 None:intergenic 45.0%
CACAGACAGCAGTACTGTTT+GGG - Chr1:35101537-35101556 None:intergenic 45.0%
CACTATGGTATCCCTGTTAC+TGG + Chr1:35100582-35100601 MsG0180002227.01.T01:CDS 45.0%
CAGTAACAGGGATACCATAG+TGG - Chr1:35100584-35100603 None:intergenic 45.0%
CCCACGAGTGAATAGAAAGT+TGG - Chr1:35098731-35098750 None:intergenic 45.0%
CCTTCAGAGGAATACTCTGA+AGG - Chr1:35102634-35102653 None:intergenic 45.0%
CGCTCACTCATTCACATAAG+TGG + Chr1:35098959-35098978 MsG0180002227.01.T01:intron 45.0%
CTTGGATGATCCACATCTCA+GGG - Chr1:35098606-35098625 None:intergenic 45.0%
GAACAGTGGTCTAAATCGAG+TGG - Chr1:35099111-35099130 None:intergenic 45.0%
GAAGAACTGCCATAACACAG+AGG - Chr1:35100440-35100459 None:intergenic 45.0%
GAGGAGAATGGTGCAACATA+TGG - Chr1:35103508-35103527 None:intergenic 45.0%
GAGGATTTGTCCCTTGCAAA+TGG + Chr1:35102188-35102207 MsG0180002227.01.T01:CDS 45.0%
GAGTGACATAATCCTTCACC+AGG - Chr1:35103255-35103274 None:intergenic 45.0%
GATATCAAACCCAGCGATGA+TGG - Chr1:35100614-35100633 None:intergenic 45.0%
GATGCTAGAACAGCAGAGAA+AGG + Chr1:35102820-35102839 MsG0180002227.01.T01:CDS 45.0%
GATGGAATAGCCCAGTAACA+GGG - Chr1:35100596-35100615 None:intergenic 45.0%
GATGTGCAAGACTCATTACG+AGG + Chr1:35102319-35102338 MsG0180002227.01.T01:CDS 45.0%
GCCTTTCAATTGATCGGCAA+GGG - Chr1:35103804-35103823 None:intergenic 45.0%
GCTCTTCAAGCTTGACAAGA+AGG - Chr1:35102451-35102470 None:intergenic 45.0%
GCTGAGGCCTTTCAATTGAT+CGG - Chr1:35103810-35103829 None:intergenic 45.0%
GGAAAAGGAAGCTGAAATCG+AGG + Chr1:35102295-35102314 MsG0180002227.01.T01:CDS 45.0%
GGCACAACGACACAATTATC+AGG - Chr1:35098527-35098546 None:intergenic 45.0%
GGGGAAGAAGGTGATTTCAT+AGG - Chr1:35100304-35100323 None:intergenic 45.0%
GGGGCGACATGAAACAAAAA+AGG + Chr1:35098406-35098425 MsG0180002227.01.T01:intron 45.0%
GGTCTAAATCGAGTGGAAGT+TGG - Chr1:35099104-35099123 None:intergenic 45.0%
GGTGATCTTGAAAACGTCGA+GGG + Chr1:35103846-35103865 MsG0180002227.01.T01:CDS 45.0%
GGTGCAACATATGGAAAAGC+AGG - Chr1:35103499-35103518 None:intergenic 45.0%
GTACTTCTCCTGTTTGAACC+GGG + Chr1:35098641-35098660 MsG0180002227.01.T01:intron 45.0%
GTATTGCAACAGTTCGCCAA+AGG + Chr1:35102789-35102808 MsG0180002227.01.T01:CDS 45.0%
TACACCATGCTAATGTGCCT+TGG - Chr1:35098624-35098643 None:intergenic 45.0%
TACCATAGTGGCTTTCGAGA+GGG - Chr1:35100572-35100591 None:intergenic 45.0%
TACTTCTCCTGTTTGAACCG+GGG + Chr1:35098642-35098661 MsG0180002227.01.T01:intron 45.0%
TATCCTCCTGAGGAGAAGTT+TGG - Chr1:35098675-35098694 None:intergenic 45.0%
TATCTCTCGAGCACAGGTTT+AGG + Chr1:35098830-35098849 MsG0180002227.01.T01:intron 45.0%
TCAAAACAAGGTAGCCGTAC+TGG + Chr1:35098133-35098152 MsG0180002227.01.T01:CDS 45.0%
TCACAGACAGCAGTACTGTT+TGG - Chr1:35101538-35101557 None:intergenic 45.0%
TCAGATTAAGGGTGGAGCAA+TGG - Chr1:35100246-35100265 None:intergenic 45.0%
TCATCCAAGGCACATTAGCA+TGG + Chr1:35098617-35098636 MsG0180002227.01.T01:intron 45.0%
TCCCTTGCCGATCAATTGAA+AGG + Chr1:35103800-35103819 MsG0180002227.01.T01:CDS 45.0%
TGAACGAGATTTGGGGAAGA+AGG - Chr1:35100316-35100335 None:intergenic 45.0%
TGATGGAATAGCCCAGTAAC+AGG - Chr1:35100597-35100616 None:intergenic 45.0%
TGCGGTTAAGGTAACGACTT+CGG - Chr1:35098071-35098090 None:intergenic 45.0%
TGTTTGGATGGGTAAGGGTT+GGG + Chr1:35099608-35099627 MsG0180002227.01.T01:intron 45.0%
TTCTATTCACTCGTGGGATC+CGG + Chr1:35098734-35098753 MsG0180002227.01.T01:intron 45.0%
TTCTCCTCAGGAGGATAGAT+GGG + Chr1:35098678-35098697 MsG0180002227.01.T01:intron 45.0%
TTGGGGTTGAACGAGATTTG+GGG - Chr1:35100323-35100342 None:intergenic 45.0%
TTTAACTACCTTGTGACCGC+CGG + Chr1:35100403-35100422 MsG0180002227.01.T01:intron 45.0%
TTTCAAACCCCGGTTCAAAC+AGG - Chr1:35098652-35098671 None:intergenic 45.0%
! AAGGTACCTGGTCGAAAAAG+GGG - Chr1:35101687-35101706 None:intergenic 45.0%
! ACTGGATCACCTCCTTTTCA+GGG + Chr1:35098164-35098183 MsG0180002227.01.T01:intron 45.0%
! CCCCAAATCGATTTCAGTGT+TGG + Chr1:35100370-35100389 MsG0180002227.01.T01:intron 45.0%
! CCTTCAGAGTATTCCTCTGA+AGG + Chr1:35102631-35102650 MsG0180002227.01.T01:CDS 45.0%
! CTATCAACTTGTTCCGACCT+AGG - Chr1:35098354-35098373 None:intergenic 45.0%
! GAAAAAGGGGTTTGTTTGGG+TGG - Chr1:35101674-35101693 None:intergenic 45.0%
! GGTCGAAAAAGGGGTTTGTT+TGG - Chr1:35101678-35101697 None:intergenic 45.0%
! GTTGAGGTGTTAGAGCTTTG+CGG + Chr1:35102533-35102552 MsG0180002227.01.T01:CDS 45.0%
! TCTTCGCCAGATGAGTTTTG+TGG + Chr1:35102268-35102287 MsG0180002227.01.T01:CDS 45.0%
! TGGTGGTGAAGGTAAAACAG+TGG + Chr1:35099634-35099653 MsG0180002227.01.T01:intron 45.0%
! TTTAAGGCTAGAGGCAATGG+CGG + Chr1:35099759-35099778 MsG0180002227.01.T01:intron 45.0%
!! CTAGGTCGGAACAAGTTGAT+AGG + Chr1:35098352-35098371 MsG0180002227.01.T01:intron 45.0%
!! GAAAGGTACCTGGTCGAAAA+AGG - Chr1:35101689-35101708 None:intergenic 45.0%
!! GTGAAGAGAAGAAAGGTACC+TGG - Chr1:35101699-35101718 None:intergenic 45.0%
!! TGAAATCGATTTGGGGGTGA+GGG - Chr1:35100366-35100385 None:intergenic 45.0%
!! TTACGGAGAATGGTGATGGT+GGG + Chr1:35102165-35102184 MsG0180002227.01.T01:CDS 45.0%
!! TTTGACATAGTGGGCCCTTA+CGG + Chr1:35098458-35098477 MsG0180002227.01.T01:intron 45.0%
!!! AACAAACCCCTTTTTCGACC+AGG + Chr1:35101678-35101697 MsG0180002227.01.T01:intron 45.0%
!!! TTAAATTAAATTTTGTAAAA+TGG - Chr1:35099298-35099317 None:intergenic 5.0%
AACAAGGTAGCCGTACTGGA+AGG + Chr1:35098137-35098156 MsG0180002227.01.T01:CDS 50.0%
AACAATGTGGGAGACAGCTG+TGG + Chr1:35103168-35103187 MsG0180002227.01.T01:CDS 50.0%
ACACACATCAGGTACCATGG+AGG - Chr1:35103527-35103546 None:intergenic 50.0%
ACACACATTCGCAAATGCGC+CGG - Chr1:35101494-35101513 None:intergenic 50.0%
AGAGCTAATAGCCCGTTGTG+TGG - Chr1:35098489-35098508 None:intergenic 50.0%
AGAGGAGCAGTTCTCCTCTA+TGG + Chr1:35103210-35103229 MsG0180002227.01.T01:CDS 50.0%
AGCTCCCTAAACCCTAGCAA+AGG - Chr1:35100150-35100169 None:intergenic 50.0%
AGGGAGTCTCGCTTACACTT+TGG + Chr1:35102868-35102887 MsG0180002227.01.T01:CDS 50.0%
ATAGCAAGATACAGAGGCGG+TGG - Chr1:35100509-35100528 None:intergenic 50.0%
ATAGTTGGGCTGCTTGTCGA+AGG - Chr1:35103774-35103793 None:intergenic 50.0%
ATGATCCACATCTCAGGGTC+AGG - Chr1:35098601-35098620 None:intergenic 50.0%
CAACTTGATCAGCAACCAGG+AGG - Chr1:35103147-35103166 None:intergenic 50.0%
CACACATCTTCTCCTGGTGA+AGG + Chr1:35103240-35103259 MsG0180002227.01.T01:CDS 50.0%
CCACCCTTTGCTAGGGTTTA+GGG + Chr1:35100143-35100162 MsG0180002227.01.T01:intron 50.0%
CCTGAGATGTGGATCATCCA+AGG + Chr1:35098604-35098623 MsG0180002227.01.T01:intron 50.0%
CCTTGGATGATCCACATCTC+AGG - Chr1:35098607-35098626 None:intergenic 50.0%
CGCATTTGCGAATGTGTGTC+GGG + Chr1:35101495-35101514 MsG0180002227.01.T01:intron 50.0%
CGTTACCTTAACCGCAAGGA+GGG + Chr1:35098075-35098094 MsG0180002227.01.T01:CDS 50.0%
CTAGCATCTCGTCATCCCTT+TGG - Chr1:35102808-35102827 None:intergenic 50.0%
CTCACAATGCGACACACATC+AGG - Chr1:35103538-35103557 None:intergenic 50.0%
CTTCACCAGGAGAAGATGTG+TGG - Chr1:35103242-35103261 None:intergenic 50.0%
CTTCTCCTCAGGAGGATAGA+TGG + Chr1:35098677-35098696 MsG0180002227.01.T01:intron 50.0%
GAAGCTGGTGGTACTTCTCA+TGG - Chr1:35103345-35103364 None:intergenic 50.0%
GAGCTAATAGCCCGTTGTGT+GGG - Chr1:35098488-35098507 None:intergenic 50.0%
GAGTTGAAGAGTCAGCTCCA+TGG + Chr1:35102392-35102411 MsG0180002227.01.T01:CDS 50.0%
GATAGAGTCCTCAGAACTGC+TGG + Chr1:35103118-35103137 MsG0180002227.01.T01:CDS 50.0%
GCAAGGGATGCCACATAGTT+GGG - Chr1:35103788-35103807 None:intergenic 50.0%
GCAGTTCTCCTCTATGGAGT+CGG + Chr1:35103216-35103235 MsG0180002227.01.T01:CDS 50.0%
GCGCATTTGCGAATGTGTGT+CGG + Chr1:35101494-35101513 MsG0180002227.01.T01:intron 50.0%
GCGGTTAAGGTAACGACTTC+GGG - Chr1:35098070-35098089 None:intergenic 50.0%
GCTCCCTAAACCCTAGCAAA+GGG - Chr1:35100149-35100168 None:intergenic 50.0%
GGAGAACTGCTCCTCTAACA+CGG - Chr1:35103206-35103225 None:intergenic 50.0%
GGCATTCTTCCAACAGAAGC+TGG - Chr1:35103360-35103379 None:intergenic 50.0%
GGCCTTTCAATTGATCGGCA+AGG - Chr1:35103805-35103824 None:intergenic 50.0%
GGCGAGGTGGGACAAAAAAA+GGG - Chr1:35098382-35098401 None:intergenic 50.0%
GGCGGTCACAAGGTAGTTAA+AGG - Chr1:35100404-35100423 None:intergenic 50.0%
GGTGTCTTGAGTTTGATCCC+TGG - Chr1:35099944-35099963 None:intergenic 50.0%
GGTGTTTCCCCTCTGTGTTA+TGG + Chr1:35100428-35100447 MsG0180002227.01.T01:intron 50.0%
GTGGAGCAATGGATACGACA+TGG - Chr1:35100235-35100254 None:intergenic 50.0%
GTTACCTTAACCGCAAGGAG+GGG + Chr1:35098076-35098095 MsG0180002227.01.T01:CDS 50.0%
TAGAGTCCTCAGAACTGCTG+GGG + Chr1:35103120-35103139 MsG0180002227.01.T01:CDS 50.0%
TCAGGTACCATGGAGGAGAA+TGG - Chr1:35103520-35103539 None:intergenic 50.0%
TCCACCCTTTGCTAGGGTTT+AGG + Chr1:35100142-35100161 MsG0180002227.01.T01:intron 50.0%
TCGTTACCTTAACCGCAAGG+AGG + Chr1:35098074-35098093 MsG0180002227.01.T01:CDS 50.0%
TCGTTGTGCCTAGACTGTGA+GGG + Chr1:35098537-35098556 MsG0180002227.01.T01:intron 50.0%
TCTATTCACTCGTGGGATCC+GGG + Chr1:35098735-35098754 MsG0180002227.01.T01:intron 50.0%
TCTCCTCAGGAGGATAGATG+GGG + Chr1:35098679-35098698 MsG0180002227.01.T01:intron 50.0%
TGCTAGGGTTTAGGGAGCTA+TGG + Chr1:35100151-35100170 MsG0180002227.01.T01:intron 50.0%
TGGGCTATTCCATCATCGCT+GGG + Chr1:35100602-35100621 MsG0180002227.01.T01:CDS 50.0%
TGTTGCACCATTCTCCTCCA+TGG + Chr1:35103510-35103529 MsG0180002227.01.T01:CDS 50.0%
TTACCTTAACCGCAAGGAGG+GGG + Chr1:35098077-35098096 MsG0180002227.01.T01:CDS 50.0%
TTCCCTCTCGAAAGCCACTA+TGG + Chr1:35100567-35100586 MsG0180002227.01.T01:CDS 50.0%
TTGCGAATGTGTGTCGGGTT+GGG + Chr1:35101500-35101519 MsG0180002227.01.T01:intron 50.0%
TTGTTTCATGTCGCCCCACT+GGG - Chr1:35098403-35098422 None:intergenic 50.0%
TTTGCGAATGTGTGTCGGGT+TGG + Chr1:35101499-35101518 MsG0180002227.01.T01:intron 50.0%
TTTGTTTCATGTCGCCCCAC+TGG - Chr1:35098404-35098423 None:intergenic 50.0%
! CTCGAGCACAGGTTTAGGTT+TGG + Chr1:35098835-35098854 MsG0180002227.01.T01:intron 50.0%
! GAAGTACCACCAGCTTCTGT+TGG + Chr1:35103348-35103367 MsG0180002227.01.T01:CDS 50.0%
! GACTGGATCACCTCCTTTTC+AGG + Chr1:35098163-35098182 MsG0180002227.01.T01:intron 50.0%
! TCCTCTGAAGGCTCTCAAAG+TGG + Chr1:35102643-35102662 MsG0180002227.01.T01:CDS 50.0%
! TCCTTGCTGTCGATGAGCTT+CGG + Chr1:35102348-35102367 MsG0180002227.01.T01:CDS 50.0%
!! ACAACGGGCTATTAGCTCTG+TGG + Chr1:35098490-35098509 MsG0180002227.01.T01:intron 50.0%
!! CTGAAATCGATTTGGGGGTG+AGG - Chr1:35100367-35100386 None:intergenic 50.0%
!! GTTACGGAGAATGGTGATGG+TGG + Chr1:35102164-35102183 MsG0180002227.01.T01:CDS 50.0%
!! TACGGAGAATGGTGATGGTG+GGG + Chr1:35102166-35102185 MsG0180002227.01.T01:CDS 50.0%
!! TTGACATAGTGGGCCCTTAC+GGG + Chr1:35098459-35098478 MsG0180002227.01.T01:intron 50.0%
!!! GGCATGCTTTTGAAATGGGC+CGG + Chr1:35102234-35102253 MsG0180002227.01.T01:CDS 50.0%
ACCCTAGCAAAGGGTGGAAG+CGG - Chr1:35100140-35100159 None:intergenic 55.0%
ACCGCTTCCACCCTTTGCTA+GGG + Chr1:35100136-35100155 MsG0180002227.01.T01:intron 55.0%
AGATACAGAGGCGGTGGATG+TGG - Chr1:35100503-35100522 None:intergenic 55.0%
ATGGAGGCGGCGAGCTATTT+GGG - Chr1:35100341-35100360 None:intergenic 55.0%
CACAGAGGGGAAACACCAAC+CGG - Chr1:35100425-35100444 None:intergenic 55.0%
CCCTAAACCCTAGCAAAGGG+TGG - Chr1:35100146-35100165 None:intergenic 55.0%
CGACAAGCAGCCCAACTATG+TGG + Chr1:35103775-35103794 MsG0180002227.01.T01:CDS 55.0%
CTGGGCTATTCCATCATCGC+TGG + Chr1:35100601-35100620 MsG0180002227.01.T01:CDS 55.0%
GACAGCTATCTCTCGAGCAC+AGG + Chr1:35098824-35098843 MsG0180002227.01.T01:intron 55.0%
GAGGATAGATGGGGCGATTC+AGG + Chr1:35098688-35098707 MsG0180002227.01.T01:intron 55.0%
GATGGGTAAGGGTTGGGAGA+TGG + Chr1:35099614-35099633 MsG0180002227.01.T01:intron 55.0%
GCGACACACATCAGGTACCA+TGG - Chr1:35103530-35103549 None:intergenic 55.0%
GGCAAGGGATGCCACATAGT+TGG - Chr1:35103789-35103808 None:intergenic 55.0%
GGGCGAGGTGGGACAAAAAA+AGG - Chr1:35098383-35098402 None:intergenic 55.0%
GGTGAAGGTGATTGAGAGGC+AGG - Chr1:35100214-35100233 None:intergenic 55.0%
GTCGTTGTGCCTAGACTGTG+AGG + Chr1:35098536-35098555 MsG0180002227.01.T01:intron 55.0%
TCCAGTCGCACCTTCCAGTA+CGG - Chr1:35098150-35098169 None:intergenic 55.0%
TGGAAGCGGTGCAAGGACTT+GGG - Chr1:35100126-35100145 None:intergenic 55.0%
TTGCTGTCGATGAGCTTCGG+GGG + Chr1:35102351-35102370 MsG0180002227.01.T01:CDS 55.0%
! ATGTGTGGCCGACTCCATAG+AGG - Chr1:35103227-35103246 None:intergenic 55.0%
! CCTTGCTGTCGATGAGCTTC+GGG + Chr1:35102349-35102368 MsG0180002227.01.T01:CDS 55.0%
! CTTGCTGTCGATGAGCTTCG+GGG + Chr1:35102350-35102369 MsG0180002227.01.T01:CDS 55.0%
! GCCACTTTGAGAGCCTTCAG+AGG - Chr1:35102647-35102666 None:intergenic 55.0%
! GCTGTCTGTGAGTGCTGCTA+GGG + Chr1:35101547-35101566 MsG0180002227.01.T01:intron 55.0%
! TGCTGTCTGTGAGTGCTGCT+AGG + Chr1:35101546-35101565 MsG0180002227.01.T01:intron 55.0%
! TTTGAAATGGGCCGGCCAGA+GGG + Chr1:35102242-35102261 MsG0180002227.01.T01:CDS 55.0%
!! TGGATGTGGTGGTGGACGAT+CGG - Chr1:35100489-35100508 None:intergenic 55.0%
!!! TTTTGAAATGGGCCGGCCAG+AGG + Chr1:35102241-35102260 MsG0180002227.01.T01:CDS 55.0%
AACACCAACCGGCGGTCACA+AGG - Chr1:35100414-35100433 None:intergenic 60.0%
ACTACCTTGTGACCGCCGGT+TGG + Chr1:35100407-35100426 MsG0180002227.01.T01:intron 60.0%
AGAGGGGAAACACCAACCGG+CGG - Chr1:35100422-35100441 None:intergenic 60.0%
ATCTGGCGAAGAAGCCCCTC+TGG - Chr1:35102260-35102279 None:intergenic 60.0%
ATTCACTCGTGGGATCCGGG+CGG + Chr1:35098738-35098757 MsG0180002227.01.T01:intron 60.0%
CAAAGGGTGGAAGCGGTGCA+AGG - Chr1:35100133-35100152 None:intergenic 60.0%
CACCGCTTCCACCCTTTGCT+AGG + Chr1:35100135-35100154 MsG0180002227.01.T01:intron 60.0%
CATCCCCCTCCTTGCGGTTA+AGG - Chr1:35098083-35098102 None:intergenic 60.0%
CCAGTCACTAGCCCTGCCTT+CGG - Chr1:35098106-35098125 None:intergenic 60.0%
CCCGAAGCTCATCGACAGCA+AGG - Chr1:35102352-35102371 None:intergenic 60.0%
CGAGAGGAGAGGAGCCATGA+TGG - Chr1:35098775-35098794 None:intergenic 60.0%
CTTACGGGAGGCCCACACAA+CGG + Chr1:35098474-35098493 MsG0180002227.01.T01:intron 60.0%
GATGGAGGCGGCGAGCTATT+TGG - Chr1:35100342-35100361 None:intergenic 60.0%
GCTGAGAGCCCTCACAGTCT+AGG - Chr1:35098548-35098567 None:intergenic 60.0%
GGAAGCGGTGCAAGGACTTG+GGG - Chr1:35100125-35100144 None:intergenic 60.0%
GGGTAAGGGTTGGGAGATGG+TGG + Chr1:35099617-35099636 MsG0180002227.01.T01:intron 60.0%
GTCGGCCACACATCTTCTCC+TGG + Chr1:35103234-35103253 MsG0180002227.01.T01:CDS 60.0%
GTGGAAGCGGTGCAAGGACT+TGG - Chr1:35100127-35100146 None:intergenic 60.0%
GTTGTGTGGGCCTCCCGTAA+GGG - Chr1:35098475-35098494 None:intergenic 60.0%
TACAGAGGCGGTGGATGTGG+TGG - Chr1:35100500-35100519 None:intergenic 60.0%
TCGAGGGACGCAGCTTACAG+TGG + Chr1:35103862-35103881 MsG0180002227.01.T01:CDS 60.0%
TCGCCCCATCTATCCTCCTG+AGG - Chr1:35098685-35098704 None:intergenic 60.0%
TCGGACGGAGGAAGGCTTGA+CGG - Chr1:35100470-35100489 None:intergenic 60.0%
TGCTGTCGATGAGCTTCGGG+GGG + Chr1:35102352-35102371 MsG0180002227.01.T01:CDS 60.0%
TGGAGGCGGCGAGCTATTTG+GGG - Chr1:35100340-35100359 None:intergenic 60.0%
TTACGGGAGGCCCACACAAC+GGG + Chr1:35098475-35098494 MsG0180002227.01.T01:intron 60.0%
TTGAAATGGGCCGGCCAGAG+GGG + Chr1:35102243-35102262 MsG0180002227.01.T01:CDS 60.0%
TTTGTCCCACCTCGCCCAGT+GGG + Chr1:35098386-35098405 MsG0180002227.01.T01:intron 60.0%
! GGGTTGGGAGATGGTGGTGA+AGG + Chr1:35099623-35099642 MsG0180002227.01.T01:intron 60.0%
! TTTTGTCCCACCTCGCCCAG+TGG + Chr1:35098385-35098404 MsG0180002227.01.T01:intron 60.0%
!! ACATAGTGGGCCCTTACGGG+AGG + Chr1:35098462-35098481 MsG0180002227.01.T01:intron 60.0%
!! GGAGAATGGTGATGGTGGGG+AGG + Chr1:35102169-35102188 MsG0180002227.01.T01:CDS 60.0%
!! TGTGGTGGTGGACGATCGGA+CGG - Chr1:35100485-35100504 None:intergenic 60.0%
AGAGGCGGTGGATGTGGTGG+TGG - Chr1:35100497-35100516 None:intergenic 65.0%
CAGAACTGCTGGGGTCCTCC+TGG + Chr1:35103129-35103148 MsG0180002227.01.T01:CDS 65.0%
CGTTGTGTGGGCCTCCCGTA+AGG - Chr1:35098476-35098495 None:intergenic 65.0%
CTTCGGCATCCCCCTCCTTG+CGG - Chr1:35098089-35098108 None:intergenic 65.0%
GACGGAGGAAGGCTTGACGG+AGG - Chr1:35100467-35100486 None:intergenic 65.0%
GGAGGACCCCAGCAGTTCTG+AGG - Chr1:35103129-35103148 None:intergenic 65.0%
GTGGACGATCGGACGGAGGA+AGG - Chr1:35100478-35100497 None:intergenic 65.0%
TTGTCCCACCTCGCCCAGTG+GGG + Chr1:35098387-35098406 MsG0180002227.01.T01:intron 65.0%
TTTGGGGGTGAGGGCGATGG+AGG - Chr1:35100357-35100376 None:intergenic 65.0%
! CCGAAGGCAGGGCTAGTGAC+TGG + Chr1:35098103-35098122 MsG0180002227.01.T01:CDS 65.0%
! CGATTTGGGGGTGAGGGCGA+TGG - Chr1:35100360-35100379 None:intergenic 65.0%
! GCCGTACTGGAAGGTGCGAC+TGG + Chr1:35098146-35098165 MsG0180002227.01.T01:intron 65.0%
AGGAGGGGGATGCCGAAGGC+AGG + Chr1:35098091-35098110 MsG0180002227.01.T01:CDS 70.0%
CGCAAGGAGGGGGATGCCGA+AGG + Chr1:35098087-35098106 MsG0180002227.01.T01:CDS 70.0%
CGGCGCCTGACCCTGAGATG+TGG + Chr1:35098593-35098612 MsG0180002227.01.T01:intron 70.0%
CGGTCCAGGGGGGACCATCA+TGG + Chr1:35098758-35098777 MsG0180002227.01.T01:intron 70.0%
GGAGCCATGATGGTCCCCCC+TGG - Chr1:35098765-35098784 None:intergenic 70.0%
GGAGGGGGATGCCGAAGGCA+GGG + Chr1:35098092-35098111 MsG0180002227.01.T01:CDS 70.0%
GGCGAAGAAGCCCCTCTGGC+CGG - Chr1:35102256-35102275 None:intergenic 70.0%
TCATGTCGCCCCACTGGGCG+AGG - Chr1:35098398-35098417 None:intergenic 70.0%
!! GGTGGTGGACGATCGGACGG+AGG - Chr1:35100482-35100501 None:intergenic 70.0%
ATGGTCCCCCCTGGACCGCC+CGG - Chr1:35098756-35098775 None:intergenic 75.0%
CGTGGGATCCGGGCGGTCCA+GGG + Chr1:35098745-35098764 MsG0180002227.01.T01:intron 75.0%
GGGGGTGAGGGCGATGGAGG+CGG - Chr1:35100354-35100373 None:intergenic 75.0%
GTCGCCCCACTGGGCGAGGT+GGG - Chr1:35098394-35098413 None:intergenic 75.0%
GTGGGATCCGGGCGGTCCAG+GGG + Chr1:35098746-35098765 MsG0180002227.01.T01:intron 75.0%
TCGTGGGATCCGGGCGGTCC+AGG + Chr1:35098744-35098763 MsG0180002227.01.T01:intron 75.0%
TGGGATCCGGGCGGTCCAGG+GGG + Chr1:35098747-35098766 MsG0180002227.01.T01:intron 75.0%
TGTCGCCCCACTGGGCGAGG+TGG - Chr1:35098395-35098414 None:intergenic 75.0%
! GGGATCCGGGCGGTCCAGGG+GGG + Chr1:35098748-35098767 MsG0180002227.01.T01:intron 80.0%
Chromosome Type Strat End Strand Name
Chr1 gene 35098064 35103900 35098064 ID=MsG0180002227.01;Name=MsG0180002227.01
Chr1 mRNA 35098064 35103900 35098064 ID=MsG0180002227.01.T01;Parent=MsG0180002227.01;Name=MsG0180002227.01.T01;_AED=0.31;_eAED=0.33;_QI=0|0|0.33|0.66|1|1|3|0|680
Chr1 exon 35098064 35098158 35098064 ID=MsG0180002227.01.T01:exon:46074;Parent=MsG0180002227.01.T01
Chr1 exon 35100454 35100623 35100454 ID=MsG0180002227.01.T01:exon:46075;Parent=MsG0180002227.01.T01
Chr1 exon 35102123 35103900 35102123 ID=MsG0180002227.01.T01:exon:46076;Parent=MsG0180002227.01.T01
Chr1 CDS 35098064 35098158 35098064 ID=MsG0180002227.01.T01:cds;Parent=MsG0180002227.01.T01
Chr1 CDS 35100454 35100623 35100454 ID=MsG0180002227.01.T01:cds;Parent=MsG0180002227.01.T01
Chr1 CDS 35102123 35103900 35102123 ID=MsG0180002227.01.T01:cds;Parent=MsG0180002227.01.T01
Gene Sequence

>MsG0180002227.01.T01

ATGCCCGAAGTCGTTACCTTAACCGCAAGGAGGGGGATGCCGAAGGCAGGGCTAGTGACTGGAGTGAAGTCAAAACAAGGTAGCCGTACTGGAAGTTCTTCTGCACCTCCGTCAAGCCTTCCTCCGTCCGATCGTCCACCACCACATCCACCGCCTCTGTATCTTGCTATTATGGATGTAATCTCAATCATTGAAACATCAATTGAGCTTCCCTCTCGAAAGCCACTATGGTATCCCTGTTACTGGGCTATTCCATCATCGCTGGGGATTCATGTGATCATGGATTTAAAACCAAAGAGAAGAAGTGTTACGGAGAATGGTGATGGTGGGGAGGATTTGTCCCTTGCAAATGGGAATGATGTTGGTCCTCTTGTTAGGCATGCTTTTGAAATGGGCCGGCCAGAGGGGCTTCTTCGCCAGATGAGTTTTGTGGTTAAGGAAAAGGAAGCTGAAATCGAGGAGATGTGCAAGACTCATTACGAGGAGTTCATCCTTGCTGTCGATGAGCTTCGGGGGGTGTTGTTTGATGCTGAAGAGTTGAAGAGTCAGCTCCATGGTGACAATTTTAAGTTACAGCAGGTTGGCAGTGACCTTCTTGTCAAGCTTGAAGAGCTTCTTGAGTGTTATTCTGTTAAGAAGAATGTGGCTGAAGCTGTAAAAATGTCCAAGAAGTGTGTTGAGGTGTTAGAGCTTTGCGGAAAGTGTAACAGTCAAGTTTCTGAAGGCCAGTTTTATTCCGCATTGAAAACTGTGGATTTGCTTGAGAAAAGTTACCTTCAGAGTATTCCTCTGAAGGCTCTCAAAGTGGCTGTAGAGAGAAGAATTCCTGTAATAAAATCGCACATTGAGAAGAATGTTCGCGATCAAGTTAACGATTGGATGGTTCAAATAAGGAGTTCTGCTAGAAATATTGGGCAAACAGCAATTGGCCGTATTGCAACAGTTCGCCAAAGGGATGACGAGATGCTAGAACAGCAGAGAAAGGCTGAAGAACAATATATTTCAGGAGCAGGGAGTCTCGCTTACACTTTGGATGCCGAAGAATTTGACGAAGATTCTGTTATCAAGTTTGATCTTACACCTCTTTATCGTGCTTGTCATATTCATGATTTTCTAGGAATCCGAGAGAAGTTTCGTGAATACTACTATACTAACAGATTGTTACAACTGAATTCCGACCTTGAAATATCTTCAGCACAACCTTTTGTTGAATCTTACCAGACATTTTTTGCTCAAATTGCTGGTTTCTTTATGGTTGAGGATAGAGTCCTCAGAACTGCTGGGGTCCTCCTGGTTGCTGATCAAGTTGAAACAATGTGGGAGACAGCTGTGGCTAAAATGACATCCGTGTTAGAGGAGCAGTTCTCCTCTATGGAGTCGGCCACACATCTTCTCCTGGTGAAGGATTATGTCACTCTGTTTGGGTCTACTCTTAGACAATATGGGCATGACATTGGCACACTTCTTGATGTGCTTGATAGCAGCCATGAGAAGTACCACCAGCTTCTGTTGGAAGAATGCCGGCAACAAACTGTTGATGTTCTCGGCAATGACTCATATGACCAAGTGTCGATAAAAAAGGAATCTGACTATGAGAATGTTGTTCTTTCATTTCATCTTCAAACATCAGATATTATGCCTGCTTTTCCATATGTTGCACCATTCTCCTCCATGGTACCTGATGTGTGTCGCATTGTGAGATCCTTTATCAAAGGCTCCGTTGATTACTTATCTCATGGTATTGGTATGCATATGAATGTCTTTGATGTTGTGAGGAAGTATTTGGACAAGTTCCTTATTGACGTATTGAATGCAGTATTACTCAATACAATTAATGGTGGCAACATCGCTGTAACTCAAGTTATGCAGATTGCTACAAACATAGCTGTCCTTGAAAGAGCCTGTGATTTTTTCCTTCGACAAGCAGCCCAACTATGTGGCATCCCTTGCCGATCAATTGAAAGGCCTCAGCCAGATTTAAGTGCAAAGGTGATCTTGAAAACGTCGAGGGACGCAGCTTACAGTGGCCTATTGAAATGGTAA

Protein sequence

>MsG0180002227.01.T01

MPEVVTLTARRGMPKAGLVTGVKSKQGSRTGSSSAPPSSLPPSDRPPPHPPPLYLAIMDVISIIETSIELPSRKPLWYPCYWAIPSSLGIHVIMDLKPKRRSVTENGDGGEDLSLANGNDVGPLVRHAFEMGRPEGLLRQMSFVVKEKEAEIEEMCKTHYEEFILAVDELRGVLFDAEELKSQLHGDNFKLQQVGSDLLVKLEELLECYSVKKNVAEAVKMSKKCVEVLELCGKCNSQVSEGQFYSALKTVDLLEKSYLQSIPLKALKVAVERRIPVIKSHIEKNVRDQVNDWMVQIRSSARNIGQTAIGRIATVRQRDDEMLEQQRKAEEQYISGAGSLAYTLDAEEFDEDSVIKFDLTPLYRACHIHDFLGIREKFREYYYTNRLLQLNSDLEISSAQPFVESYQTFFAQIAGFFMVEDRVLRTAGVLLVADQVETMWETAVAKMTSVLEEQFSSMESATHLLLVKDYVTLFGSTLRQYGHDIGTLLDVLDSSHEKYHQLLLEECRQQTVDVLGNDSYDQVSIKKESDYENVVLSFHLQTSDIMPAFPYVAPFSSMVPDVCRIVRSFIKGSVDYLSHGIGMHMNVFDVVRKYLDKFLIDVLNAVLLNTINGGNIAVTQVMQIATNIAVLERACDFFLRQAAQLCGIPCRSIERPQPDLSAKVILKTSRDAAYSGLLKW*