AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1418010


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1418010 MtrunA17_Chr4g0076241 96.591 352 12 0 52 403 1 352 0.0 691
Msa1418010 MtrunA17_Chr5g0446411 56.772 347 146 2 52 398 1 343 3.48e-125 365
Msa1418010 MtrunA17_Chr7g0270761 35.836 293 184 2 106 394 131 423 2.76e-63 209
Msa1418010 MtrunA17_Chr4g0051871 36.462 277 168 4 127 398 140 413 1.16e-60 202
Msa1418010 MtrunA17_Chr5g0443241 37.097 248 148 4 123 364 102 347 6.48e-45 159
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1418010 AT5G55630.2 57.627 295 125 0 104 398 58 352 3.21e-117 346
Msa1418010 AT5G55630.1 57.627 295 125 0 104 398 58 352 3.21e-117 346
Msa1418010 AT4G18160.1 38.571 280 167 3 123 398 151 429 5.25e-59 198
Msa1418010 AT4G01840.1 35.315 286 175 2 123 398 118 403 3.77e-56 190
Msa1418010 AT5G46370.1 36.429 280 165 5 129 398 153 429 6.15e-56 191
Msa1418010 AT1G02510.1 33.216 283 167 3 104 386 17 277 4.36e-45 157
Msa1418010 AT5G46360.1 38.554 166 101 1 234 398 89 254 2.37e-30 117
Msa1418010 AT5G46360.2 38.732 142 86 1 234 374 89 230 2.90e-25 103

Find 89 sgRNAs with CRISPR-Local

Find 288 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACACCATTCACTCTCTTAT+TGG 0.149410 tig0024533:+55646 None:intergenic
CAAGACTAATCGGTCCTTAC+TGG 0.255990 tig0024533:-55491 Msa1418010:CDS
TGTTCCACGGTCACTACTTT+AGG 0.301171 tig0024533:-54184 Msa1418010:CDS
GTTATACATTGTGGAGATAA+AGG 0.305350 tig0024533:+54697 None:intergenic
ATGTGCAAGGCTGAAAATTT+TGG 0.309852 tig0024533:-54358 Msa1418010:CDS
TGTATACAAGTTGAAGGAAA+TGG 0.323817 tig0024533:-52688 Msa1418010:CDS
CGGTCACTACTTTAGGTTAT+GGG 0.344172 tig0024533:-54177 Msa1418010:CDS
TCACTGCTGAAATATCTTCT+TGG 0.344460 tig0024533:+52655 None:intergenic
TTGTCACAACACAGAAATAA+AGG 0.357592 tig0024533:+54539 None:intergenic
TTGCAAGCGGACGGTGGAAT+TGG 0.365168 tig0024533:-55518 Msa1418010:CDS
AGATTACATTGTTGAGAAAC+AGG 0.387285 tig0024533:-54401 Msa1418010:CDS
ACGGTCACTACTTTAGGTTA+TGG 0.387375 tig0024533:-54178 Msa1418010:CDS
TTATACATTGTGGAGATAAA+GGG 0.395633 tig0024533:+54698 None:intergenic
ATTGTGGAGATAAAGGGGTT+TGG 0.406546 tig0024533:+54704 None:intergenic
GTATACAAGTTGAAGGAAAT+GGG 0.421596 tig0024533:-52687 Msa1418010:CDS
CTTGAGGCAGCAGATCTTGA+TGG 0.425392 tig0024533:-53986 Msa1418010:CDS
AATTCCACCGTCCGCTTGCA+AGG 0.433333 tig0024533:+55520 None:intergenic
GTCTTCACTGGCATGGCTCT+CGG 0.434853 tig0024533:-54448 Msa1418010:CDS
ACAATGACTACTGTTGGATA+TGG 0.435922 tig0024533:-54520 Msa1418010:CDS
GTTTGTTGTATACAAGTTGA+AGG 0.439684 tig0024533:-52694 Msa1418010:CDS
GCATGCATTTATGTCTTCAC+TGG 0.440926 tig0024533:-54460 Msa1418010:CDS
CATGTGGGTCCCATTGTTAC+GGG 0.448705 tig0024533:-55709 Msa1418010:five_prime_UTR
ACATGTGGGTCCCATTGTTA+CGG 0.450043 tig0024533:-55710 None:intergenic
AGCATTAGTAAATAAGTTGA+TGG 0.453687 tig0024533:-54878 Msa1418010:CDS
TCTAACAAGTTACCAAATTG+AGG 0.463818 tig0024533:-54590 Msa1418010:CDS
TGTGGCCCCACCACTTTACG+TGG 0.473850 tig0024533:+55679 None:intergenic
AATTGGTTCCCAAGACTAAT+CGG 0.476868 tig0024533:-55501 Msa1418010:CDS
TGTCACAACACAGAAATAAA+GGG 0.481987 tig0024533:+54540 None:intergenic
AATTCATGATGTGTATAGTA+AGG 0.483946 tig0024533:+52536 None:intergenic
ATTGAGCAGCACCATTTGCT+TGG 0.490697 tig0024533:-54104 Msa1418010:CDS
GGGGCTACTCCCGTAACAAT+GGG 0.495113 tig0024533:+55700 None:intergenic
AGCTATTGCTTTCAGAGTCA+AGG 0.495133 tig0024533:-54837 Msa1418010:CDS
TCACTCTTTCTTACCCAGTA+AGG 0.495907 tig0024533:+55477 None:intergenic
GTGGAGATAAAGGGGTTTGG+AGG 0.501419 tig0024533:+54707 None:intergenic
TCATCCAATAAGAGAGTGAA+TGG 0.502689 tig0024533:-55650 Msa1418010:five_prime_UTR
AAACTAGACTGTGATCAATC+AGG 0.508619 tig0024533:-52618 Msa1418010:CDS
CATTTATGTCTTCACTGGCA+TGG 0.510032 tig0024533:-54455 Msa1418010:CDS
CAGTAAGGACCGATTAGTCT+TGG 0.513755 tig0024533:+55492 None:intergenic
AGAAGATATTTCAGCAGTGA+TGG 0.521751 tig0024533:-52652 Msa1418010:CDS
ATTCCACCGTCCGCTTGCAA+GGG 0.523607 tig0024533:+55521 None:intergenic
AAGAGCTTCTCGACTGCTGC+CGG 0.529816 tig0024533:-54151 Msa1418010:CDS
CTAACAAGTTACCAAATTGA+GGG 0.530492 tig0024533:-54589 Msa1418010:CDS
AAGAAGCAGAATTCAAGTTC+AGG 0.531566 tig0024533:-54666 Msa1418010:CDS
AAAAGACTGAGCCAAGCAAA+TGG 0.534462 tig0024533:+54093 None:intergenic
AATAAGAGAGTGAATGGTGT+AGG 0.534904 tig0024533:-55644 Msa1418010:five_prime_UTR
GCGGTCTTCTTCTCTGAAGA+AGG 0.536019 tig0024533:+54785 None:intergenic
AGTAAGGACCGATTAGTCTT+GGG 0.537112 tig0024533:+55493 None:intergenic
ACTCTATTGTGTTTGTTCCA+CGG 0.539533 tig0024533:-54197 Msa1418010:CDS
TGTTTATCAGTTATACATTG+TGG 0.539721 tig0024533:+54688 None:intergenic
TAAGGCAGATGATGTTAAGA+TGG 0.546031 tig0024533:+52554 None:intergenic
GTAGCCCCACGTAAAGTGGT+GGG 0.546804 tig0024533:-55685 Msa1418010:five_prime_UTR
TTGATGGAGACAAAGTTGTC+AGG 0.546814 tig0024533:-53970 Msa1418010:intron
AAGACTAATCGGTCCTTACT+GGG 0.553234 tig0024533:-55490 Msa1418010:intron
GGGAGTAGCCCCACGTAAAG+TGG 0.565858 tig0024533:-55689 Msa1418010:five_prime_UTR
GCTATTGCTTTCAGAGTCAA+GGG 0.570375 tig0024533:-54836 Msa1418010:CDS
AAAAGATTTAACATCTTGAG+AGG 0.571129 tig0024533:+55600 None:intergenic
TTAAATGTGCCCCTTGCAAG+CGG 0.571272 tig0024533:-55531 Msa1418010:CDS
TGGGGCTACTCCCGTAACAA+TGG 0.573415 tig0024533:+55699 None:intergenic
TCTTGCTGAGTCCATGTGCA+AGG 0.575638 tig0024533:-54371 Msa1418010:CDS
TTCCACCGTCCGCTTGCAAG+GGG 0.576766 tig0024533:+55522 None:intergenic
AGTAGCCCCACGTAAAGTGG+TGG 0.578003 tig0024533:-55686 Msa1418010:five_prime_UTR
ACTTGTTAGATAGAAACATA+AGG 0.578014 tig0024533:+54603 None:intergenic
ATTATCACTAAGTGATCTTG+AGG 0.579141 tig0024533:-54002 Msa1418010:CDS
TATACATTGTGGAGATAAAG+GGG 0.579592 tig0024533:+54699 None:intergenic
GTGGCCCCACCACTTTACGT+GGG 0.579822 tig0024533:+55680 None:intergenic
TGCCCCTTGCAAGCGGACGG+TGG 0.583495 tig0024533:-55524 Msa1418010:CDS
ATAAGAGAGTGAATGGTGTA+GGG 0.588889 tig0024533:-55643 Msa1418010:five_prime_UTR
TGAAGACATAAATGCATGCA+AGG 0.589047 tig0024533:+54464 None:intergenic
TTGTGTTTAGCAGCATACCT+AGG 0.589326 tig0024533:-54634 Msa1418010:CDS
GTTGTGACAATGACTACTGT+TGG 0.595895 tig0024533:-54526 Msa1418010:CDS
GGTCACTACTTTAGGTTATG+GGG 0.598779 tig0024533:-54176 Msa1418010:CDS
TGAAGATAGACAAAGATCAC+TGG 0.601013 tig0024533:-54047 Msa1418010:CDS
GCATTAGTAAATAAGTTGAT+GGG 0.601074 tig0024533:-54877 Msa1418010:CDS
ATGTGCCCCTTGCAAGCGGA+CGG 0.605035 tig0024533:-55527 Msa1418010:CDS
AACATAAGGTACCTGTGCCT+AGG 0.617422 tig0024533:+54617 None:intergenic
AGAAGAAGACCGCGGCGTGG+CGG 0.622978 tig0024533:-54775 Msa1418010:CDS
TGGCCCCACCACTTTACGTG+GGG 0.624269 tig0024533:+55681 None:intergenic
GCTTCTCGACTGCTGCCGGT+AGG 0.626037 tig0024533:-54147 Msa1418010:CDS
TTAGCAGCATACCTAGGCAC+AGG 0.645513 tig0024533:-54628 Msa1418010:CDS
CTTATTGGATGAAATACATG+TGG 0.646379 tig0024533:+55661 None:intergenic
TTCACTGGCATGGCTCTCGG+TGG 0.647484 tig0024533:-54445 Msa1418010:CDS
TCTGAAGTTCCGCCACGCCG+CGG 0.651177 tig0024533:+54766 None:intergenic
TAGCCCCACGTAAAGTGGTG+GGG 0.658033 tig0024533:-55684 Msa1418010:five_prime_UTR
AATCTGCAGCAAGAACAGAA+TGG 0.667031 tig0024533:-54733 Msa1418010:CDS
CAGAGAAGAAGACCGCGGCG+TGG 0.691942 tig0024533:-54778 Msa1418010:CDS
TTTCAGTGTCAATTCTTACG+GGG 0.697867 tig0024533:-55580 Msa1418010:CDS
GCTGCTCAATATCCAAAACA+CGG 0.699934 tig0024533:+54117 None:intergenic
ATAACCTAAAGTAGTGACCG+TGG 0.717695 tig0024533:+54180 None:intergenic
TTCTTCAGAGAAGAAGACCG+CGG 0.758085 tig0024533:-54783 Msa1418010:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAAAAATAAAATAAAA+TGG - tig0024533:55032-55051 Msa1418010:intron 0.0%
!!! ATTTTTTAATTATTTTTTTT+TGG - tig0024533:55143-55162 Msa1418010:intron 0.0%
!!! TAAAGTAATATTTTACATTT+GGG + tig0024533:54499-54518 None:intergenic 10.0%
!!! ATAAAGTAATATTTTACATT+TGG + tig0024533:54500-54519 None:intergenic 10.0%
!! ATTAAAAAAATTATTCAATG+CGG - tig0024533:54689-54708 Msa1418010:CDS 10.0%
!! ATAAAATGGAAATTAAAATA+AGG - tig0024533:55046-55065 Msa1418010:intron 10.0%
!!! TAGTTTTTTTTTGTAATGTT+CGG + tig0024533:52910-52929 None:intergenic 15.0%
!! AACATTACAAAAAAAAACTA+AGG - tig0024533:52910-52929 Msa1418010:intron 15.0%
!! ACATTACAAAAAAAAACTAA+GGG - tig0024533:52911-52930 Msa1418010:intron 15.0%
!! ACATAAGCATTTATATAATA+AGG - tig0024533:53130-53149 Msa1418010:intron 15.0%
!! CATAAGCATTTATATAATAA+GGG - tig0024533:53131-53150 Msa1418010:intron 15.0%
!! TTAAAAAAATTATTCAATGC+GGG - tig0024533:54690-54709 Msa1418010:CDS 15.0%
!!! AAGTTTATACTTTTAATGAA+TGG - tig0024533:55665-55684 Msa1418010:five_prime_UTR 15.0%
!!! ATTTATTTGAGTTTAGTTAC+CGG - tig0024533:52702-52721 Msa1418010:CDS 20.0%
!! TTATGAGTGAATTTGTAAAT+TGG + tig0024533:54272-54291 None:intergenic 20.0%
!! TAAAAAAATTATTCAATGCG+GGG - tig0024533:54691-54710 Msa1418010:CDS 20.0%
!! TTTATTTATATCATTTGCAC+CGG - tig0024533:55253-55272 Msa1418010:intron 20.0%
!! AAAATTGTTGATCAATATTG+AGG + tig0024533:55370-55389 None:intergenic 20.0%
! AAAAGATTTAACATCTTGAG+AGG + tig0024533:52503-52522 None:intergenic 25.0%
!! ACTATTTTCATAAGTCATTG+TGG + tig0024533:53052-53071 None:intergenic 25.0%
!! AGCATTAGTAAATAAGTTGA+TGG - tig0024533:53222-53241 Msa1418010:intron 25.0%
!!! GCATTAGTAAATAAGTTGAT+GGG - tig0024533:53223-53242 Msa1418010:intron 25.0%
! TTATACATTGTGGAGATAAA+GGG + tig0024533:53405-53424 None:intergenic 25.0%
! TGTTTATCAGTTATACATTG+TGG + tig0024533:53415-53434 None:intergenic 25.0%
!! ACTTGTTAGATAGAAACATA+AGG + tig0024533:53500-53519 None:intergenic 25.0%
!! TATTGAGAATCTAGATTTTG+TGG - tig0024533:53876-53895 Msa1418010:intron 25.0%
!! ATCACTTAGTGATAATTTTC+GGG + tig0024533:54094-54113 None:intergenic 25.0%
!! GATCACTTAGTGATAATTTT+CGG + tig0024533:54095-54114 None:intergenic 25.0%
!!! TAATATTTTACATTTGGGAC+GGG + tig0024533:54494-54513 None:intergenic 25.0%
!! GTAATATTTTACATTTGGGA+CGG + tig0024533:54495-54514 None:intergenic 25.0%
! AAACTACCTTTGATACTTAA+AGG - tig0024533:54565-54584 Msa1418010:CDS 25.0%
!!! TGTATTACAATGTTGCTTTT+AGG - tig0024533:54642-54661 Msa1418010:CDS 25.0%
!!! GTATTACAATGTTGCTTTTA+GGG - tig0024533:54643-54662 Msa1418010:CDS 25.0%
! TTATTTATATCATTTGCACC+GGG - tig0024533:55254-55273 Msa1418010:intron 25.0%
! AATTCATGATGTGTATAGTA+AGG + tig0024533:55567-55586 None:intergenic 25.0%
CTTATTGGATGAAATACATG+TGG + tig0024533:52442-52461 None:intergenic 30.0%
! CTTTTCAGTGTCAATTCTTA+CGG - tig0024533:52518-52537 Msa1418010:three_prime_UTR 30.0%
! TTTTCAGTGTCAATTCTTAC+GGG - tig0024533:52519-52538 Msa1418010:three_prime_UTR 30.0%
!! TCTTTTGATGACAACAACAA+TGG + tig0024533:52823-52842 None:intergenic 30.0%
AAAAAAACTAAGGGTTTGTC+TGG - tig0024533:52920-52939 Msa1418010:intron 30.0%
CTTATTTACTTGAACACTTG+TGG - tig0024533:52958-52977 Msa1418010:intron 30.0%
! AATTAGTCTGTTTATCCAAC+AGG - tig0024533:53157-53176 Msa1418010:intron 30.0%
! ATTAGTCTGTTTATCCAACA+GGG - tig0024533:53158-53177 Msa1418010:intron 30.0%
! TCTTAGAACTTCAACTTTTC+AGG - tig0024533:53189-53208 Msa1418010:intron 30.0%
TATACATTGTGGAGATAAAG+GGG + tig0024533:53404-53423 None:intergenic 30.0%
GTTATACATTGTGGAGATAA+AGG + tig0024533:53406-53425 None:intergenic 30.0%
TCTAACAAGTTACCAAATTG+AGG - tig0024533:53510-53529 Msa1418010:intron 30.0%
CTAACAAGTTACCAAATTGA+GGG - tig0024533:53511-53530 Msa1418010:intron 30.0%
!!! TTGTTTTTATGCCCTCAATT+TGG + tig0024533:53525-53544 None:intergenic 30.0%
TGTCACAACACAGAAATAAA+GGG + tig0024533:53563-53582 None:intergenic 30.0%
TTGTCACAACACAGAAATAA+AGG + tig0024533:53564-53583 None:intergenic 30.0%
!! AGTTTTGCTATAGTGCTATT+TGG + tig0024533:53616-53635 None:intergenic 30.0%
AGATTACATTGTTGAGAAAC+AGG - tig0024533:53699-53718 Msa1418010:intron 30.0%
!! TGAAAATTTTGGTCTACAAG+AGG - tig0024533:53753-53772 Msa1418010:intron 30.0%
AATCATGAGCACAAAAAAAG+TGG + tig0024533:53833-53852 None:intergenic 30.0%
ATTATCACTAAGTGATCTTG+AGG - tig0024533:54098-54117 Msa1418010:CDS 30.0%
AATCTCTGATTATTGCGAAT+TGG + tig0024533:54220-54239 None:intergenic 30.0%
! TTTTCCCCGATTTCAAAATA+CGG - tig0024533:54416-54435 Msa1418010:CDS 30.0%
GTAGATCCTTTAAGTATCAA+AGG + tig0024533:54574-54593 None:intergenic 30.0%
GCTTAGTGTAGCTAAATTAT+TGG + tig0024533:55339-55358 None:intergenic 30.0%
!! GTTTGTTGTATACAAGTTGA+AGG - tig0024533:55406-55425 Msa1418010:intron 30.0%
! TGTATACAAGTTGAAGGAAA+TGG - tig0024533:55412-55431 Msa1418010:intron 30.0%
! GTATACAAGTTGAAGGAAAT+GGG - tig0024533:55413-55432 Msa1418010:intron 30.0%
TCATCCAATAAGAGAGTGAA+TGG - tig0024533:52450-52469 Msa1418010:three_prime_UTR 35.0%
TACACCATTCACTCTCTTAT+TGG + tig0024533:52457-52476 None:intergenic 35.0%
AATAAGAGAGTGAATGGTGT+AGG - tig0024533:52456-52475 Msa1418010:three_prime_UTR 35.0%
ATAAGAGAGTGAATGGTGTA+GGG - tig0024533:52457-52476 Msa1418010:three_prime_UTR 35.0%
TTTCAGTGTCAATTCTTACG+GGG - tig0024533:52520-52539 Msa1418010:three_prime_UTR 35.0%
! AATTGGTTCCCAAGACTAAT+CGG - tig0024533:52599-52618 Msa1418010:CDS 35.0%
AAACTACTTATGACATGCCT+GGG - tig0024533:52762-52781 Msa1418010:intron 35.0%
ATCAACTAAAAACAACTCCC+AGG + tig0024533:52782-52801 None:intergenic 35.0%
!! GTTGAAGTTCTAAGATGCTT+AGG + tig0024533:53184-53203 None:intergenic 35.0%
! AAGAAGCAGAATTCAAGTTC+AGG - tig0024533:53434-53453 Msa1418010:intron 35.0%
ACAATGACTACTGTTGGATA+TGG - tig0024533:53580-53599 Msa1418010:intron 35.0%
TGAAGACATAAATGCATGCA+AGG + tig0024533:53639-53658 None:intergenic 35.0%
! AAAATTTTCAGCCTTGCACA+TGG + tig0024533:53743-53762 None:intergenic 35.0%
! ATGTGCAAGGCTGAAAATTT+TGG - tig0024533:53742-53761 Msa1418010:intron 35.0%
!!! TTTTTTGTGCTCATGATTGC+AGG - tig0024533:53835-53854 Msa1418010:intron 35.0%
ACTCTATTGTGTTTGTTCCA+CGG - tig0024533:53903-53922 Msa1418010:intron 35.0%
TGAAGATAGACAAAGATCAC+TGG - tig0024533:54053-54072 Msa1418010:CDS 35.0%
ACAAAGATCACTGGCAAAAA+TGG - tig0024533:54062-54081 Msa1418010:CDS 35.0%
CACTCATAAGTTATGAAGCA+CGG - tig0024533:54283-54302 Msa1418010:CDS 35.0%
TTTCCCCGATTTCAAAATAC+GGG - tig0024533:54417-54436 Msa1418010:CDS 35.0%
!!! ATACCCGTATTTTGAAATCG+GGG + tig0024533:54423-54442 None:intergenic 35.0%
!!! CATACCCGTATTTTGAAATC+GGG + tig0024533:54424-54443 None:intergenic 35.0%
!!! CCATACCCGTATTTTGAAAT+CGG + tig0024533:54425-54444 None:intergenic 35.0%
CGATTTCAAAATACGGGTAT+GGG - tig0024533:54423-54442 Msa1418010:CDS 35.0%
TGTTAAAGTGAGCGTATTGT+TGG - tig0024533:54615-54634 Msa1418010:CDS 35.0%
AAAATTATTCAATGCGGGGA+CGG - tig0024533:54695-54714 Msa1418010:CDS 35.0%
TCGGGTAAGTATATGAGAAT+CGG - tig0024533:54798-54817 Msa1418010:CDS 35.0%
TATCAGATACACGTATCGTT+AGG + tig0024533:54875-54894 None:intergenic 35.0%
CGTGTATCTGATATGAGAAT+CGG - tig0024533:54882-54901 Msa1418010:CDS 35.0%
GTGTATCTGATATGAGAATC+GGG - tig0024533:54883-54902 Msa1418010:CDS 35.0%
TCGGGTAAGTATATGAGAAT+CGG - tig0024533:54798-54817 Msa1418010:CDS 35.0%
TATCAGATACACGTATCGTT+AGG + tig0024533:54875-54894 None:intergenic 35.0%
TAAACAATCACACGTATCTG+AGG - tig0024533:55076-55095 Msa1418010:intron 35.0%
ACTCCTTTGATATGTATCGA+CGG - tig0024533:55168-55187 Msa1418010:intron 35.0%
TCACTGCTGAAATATCTTCT+TGG + tig0024533:55448-55467 None:intergenic 35.0%
AGAAGATATTTCAGCAGTGA+TGG - tig0024533:55448-55467 Msa1418010:intron 35.0%
AAACTAGACTGTGATCAATC+AGG - tig0024533:55482-55501 Msa1418010:intron 35.0%
TAAGGCAGATGATGTTAAGA+TGG + tig0024533:55549-55568 None:intergenic 35.0%
!! AGTAAGGACCGATTAGTCTT+GGG + tig0024533:52610-52629 None:intergenic 40.0%
AAGACTAATCGGTCCTTACT+GGG - tig0024533:52610-52629 Msa1418010:CDS 40.0%
TCACTCTTTCTTACCCAGTA+AGG + tig0024533:52626-52645 None:intergenic 40.0%
AGGCTGTTTGAGAGAGTTTA+TGG - tig0024533:52739-52758 Msa1418010:intron 40.0%
GAAACTACTTATGACATGCC+TGG - tig0024533:52761-52780 Msa1418010:intron 40.0%
AACTAAGGGTTTGTCTGGAT+TGG - tig0024533:52925-52944 Msa1418010:intron 40.0%
TACTTGAACACTTGTGGTCA+TGG - tig0024533:52964-52983 Msa1418010:intron 40.0%
ACTTGAACACTTGTGGTCAT+GGG - tig0024533:52965-52984 Msa1418010:intron 40.0%
AGCTATTGCTTTCAGAGTCA+AGG - tig0024533:53263-53282 Msa1418010:intron 40.0%
GCTATTGCTTTCAGAGTCAA+GGG - tig0024533:53264-53283 Msa1418010:intron 40.0%
AATCTGCAGCAAGAACAGAA+TGG - tig0024533:53367-53386 Msa1418010:intron 40.0%
ATTGTGGAGATAAAGGGGTT+TGG + tig0024533:53399-53418 None:intergenic 40.0%
TTGTGTTTAGCAGCATACCT+AGG - tig0024533:53466-53485 Msa1418010:intron 40.0%
GTTGTGACAATGACTACTGT+TGG - tig0024533:53574-53593 Msa1418010:intron 40.0%
GCATGCATTTATGTCTTCAC+TGG - tig0024533:53640-53659 Msa1418010:intron 40.0%
CATTTATGTCTTCACTGGCA+TGG - tig0024533:53645-53664 Msa1418010:intron 40.0%
ATAACCTAAAGTAGTGACCG+TGG + tig0024533:53923-53942 None:intergenic 40.0%
! ACGGTCACTACTTTAGGTTA+TGG - tig0024533:53922-53941 Msa1418010:intron 40.0%
! CGGTCACTACTTTAGGTTAT+GGG - tig0024533:53923-53942 Msa1418010:intron 40.0%
! GGTCACTACTTTAGGTTATG+GGG - tig0024533:53924-53943 Msa1418010:intron 40.0%
AAACACGGCAAAAATCCTAC+CGG + tig0024533:53971-53990 None:intergenic 40.0%
! GTAGGATTTTTGCCGTGTTT+TGG - tig0024533:53971-53990 Msa1418010:CDS 40.0%
GCTGCTCAATATCCAAAACA+CGG + tig0024533:53986-54005 None:intergenic 40.0%
AAAAGACTGAGCCAAGCAAA+TGG + tig0024533:54010-54029 None:intergenic 40.0%
TTGATGGAGACAAAGTTGTC+AGG - tig0024533:54130-54149 Msa1418010:CDS 40.0%
AAAACCCGTCAAATTGGGTT+TGG + tig0024533:54362-54381 None:intergenic 40.0%
ATACCCAAACCCAGTCAAAA+CGG + tig0024533:54387-54406 None:intergenic 40.0%
!! TTTTGACTGGGTTTGGGTAT+GGG - tig0024533:54387-54406 Msa1418010:CDS 40.0%
CCGATTTCAAAATACGGGTA+TGG - tig0024533:54422-54441 Msa1418010:CDS 40.0%
TTCAAAATACGGGTATGGGA+CGG - tig0024533:54427-54446 Msa1418010:CDS 40.0%
! TTTACATTTGGGACGGGTTT+GGG + tig0024533:54488-54507 None:intergenic 40.0%
!! TTTTACATTTGGGACGGGTT+TGG + tig0024533:54489-54508 None:intergenic 40.0%
AAATTATTCAATGCGGGGAC+GGG - tig0024533:54696-54715 Msa1418010:CDS 40.0%
ATTCAATTTCTCATCCCCGT+TGG - tig0024533:54761-54780 Msa1418010:CDS 40.0%
TTCAATTTCTCATCCCCGTT+GGG - tig0024533:54762-54781 Msa1418010:CDS 40.0%
CGGGTAAGTATATGAGAATC+GGG - tig0024533:54799-54818 Msa1418010:CDS 40.0%
GTATATGAGAATCGGGTATG+TGG - tig0024533:54806-54825 Msa1418010:CDS 40.0%
ATCTGATATGAGAATCGGGT+AGG - tig0024533:54887-54906 Msa1418010:CDS 40.0%
TCTGATATGAGAATCGGGTA+GGG - tig0024533:54888-54907 Msa1418010:CDS 40.0%
CGGGTAAGTATATGAGAATC+GGG - tig0024533:54799-54818 Msa1418010:CDS 40.0%
GTATATGAGAATCGGGTATG+TGG - tig0024533:54806-54825 Msa1418010:CDS 40.0%
TATGATCTTACTGCATCTCC+CGG + tig0024533:55275-55294 None:intergenic 40.0%
TCAACGCAATACTAGTGATG+AGG + tig0024533:55307-55326 None:intergenic 40.0%
TTAAATGTGCCCCTTGCAAG+CGG - tig0024533:52569-52588 Msa1418010:exon 45.0%
!! CAGTAAGGACCGATTAGTCT+TGG + tig0024533:52611-52630 None:intergenic 45.0%
CAAGACTAATCGGTCCTTAC+TGG - tig0024533:52609-52628 Msa1418010:CDS 45.0%
ACTGGGTAAGAAAGAGTGAG+TGG - tig0024533:52627-52646 Msa1418010:CDS 45.0%
TACCGGTAAAACCACTTGTG+AGG - tig0024533:52719-52738 Msa1418010:intron 45.0%
!! AGCCTCACAAGTGGTTTTAC+CGG + tig0024533:52724-52743 None:intergenic 45.0%
TTCTTCAGAGAAGAAGACCG+CGG - tig0024533:53317-53336 Msa1418010:intron 45.0%
! AACATAAGGTACCTGTGCCT+AGG + tig0024533:53486-53505 None:intergenic 45.0%
TGTTCCACGGTCACTACTTT+AGG - tig0024533:53916-53935 Msa1418010:intron 45.0%
ATTGAGCAGCACCATTTGCT+TGG - tig0024533:53996-54015 Msa1418010:CDS 45.0%
AGCAGACACTTCACAATTGC+AGG - tig0024533:54184-54203 Msa1418010:CDS 45.0%
GCAGACACTTCACAATTGCA+GGG - tig0024533:54185-54204 Msa1418010:CDS 45.0%
!! AAATTGGGTTTGGTTCGGGT+GGG + tig0024533:54352-54371 None:intergenic 45.0%
! CGTCAAATTGGGTTTGGTTC+GGG + tig0024533:54356-54375 None:intergenic 45.0%
! CCGTCAAATTGGGTTTGGTT+CGG + tig0024533:54357-54376 None:intergenic 45.0%
CCGAACCAAACCCAATTTGA+CGG - tig0024533:54354-54373 Msa1418010:CDS 45.0%
CGAACCAAACCCAATTTGAC+GGG - tig0024533:54355-54374 Msa1418010:CDS 45.0%
TACCCAAACCCAGTCAAAAC+GGG + tig0024533:54386-54405 None:intergenic 45.0%
!!! GTTTTGACTGGGTTTGGGTA+TGG - tig0024533:54386-54405 Msa1418010:CDS 45.0%
TCAAAATACGGGTATGGGAC+GGG - tig0024533:54428-54447 Msa1418010:CDS 45.0%
AATTATTCAATGCGGGGACG+GGG - tig0024533:54697-54716 Msa1418010:CDS 45.0%
ATGAGAATCGGGTATGTGGA+TGG - tig0024533:54810-54829 Msa1418010:CDS 45.0%
TGAGAATCGGGTATGTGGAT+GGG - tig0024533:54811-54830 Msa1418010:CDS 45.0%
TATCGTTAGGCATGGCAATG+GGG + tig0024533:54862-54881 None:intergenic 45.0%
GTATCGTTAGGCATGGCAAT+GGG + tig0024533:54863-54882 None:intergenic 45.0%
GATACACGTATCGTTAGGCA+TGG + tig0024533:54870-54889 None:intergenic 45.0%
ATGAGAATCGGGTAGGGTAT+CGG - tig0024533:54894-54913 Msa1418010:intron 45.0%
ATGAGAATCGGGTATGTGGA+TGG - tig0024533:54810-54829 Msa1418010:CDS 45.0%
TGAGAATCGGGTATGTGGAT+GGG - tig0024533:54811-54830 Msa1418010:CDS 45.0%
TATCGTTAGGCATGGCAATG+GGG + tig0024533:54862-54881 None:intergenic 45.0%
GTATCGTTAGGCATGGCAAT+GGG + tig0024533:54863-54882 None:intergenic 45.0%
GATACACGTATCGTTAGGCA+TGG + tig0024533:54870-54889 None:intergenic 45.0%
ACGCCGTCGATACATATCAA+AGG + tig0024533:55174-55193 None:intergenic 45.0%
ACAACAAACTCTGCAGCACT+GGG + tig0024533:55395-55414 None:intergenic 45.0%
TACAACAAACTCTGCAGCAC+TGG + tig0024533:55396-55415 None:intergenic 45.0%
CTCTCAAACAGCCTCACAAG+TGG + tig0024533:52733-52752 None:intergenic 50.0%
CTAAGATGCTTAGGCCCTGT+TGG + tig0024533:53175-53194 None:intergenic 50.0%
! GCGGTCTTCTTCTCTGAAGA+AGG + tig0024533:53318-53337 None:intergenic 50.0%
GTGGAGATAAAGGGGTTTGG+AGG + tig0024533:53396-53415 None:intergenic 50.0%
TTAGCAGCATACCTAGGCAC+AGG - tig0024533:53472-53491 Msa1418010:intron 50.0%
TCTTGCTGAGTCCATGTGCA+AGG - tig0024533:53729-53748 Msa1418010:intron 50.0%
CTTGAGGCAGCAGATCTTGA+TGG - tig0024533:54114-54133 Msa1418010:CDS 50.0%
GGCAACAAAACCCATACCCA+CGG - tig0024533:54323-54342 Msa1418010:CDS 50.0%
!! CAAATTGGGTTTGGTTCGGG+TGG + tig0024533:54353-54372 None:intergenic 50.0%
CGGGGAAAACCCGTCAAATT+GGG + tig0024533:54367-54386 None:intergenic 50.0%
ACGGGGAAAACCCGTCAAAT+TGG + tig0024533:54368-54387 None:intergenic 50.0%
!!! GGGTTTTCCCCGTTTTGACT+GGG - tig0024533:54375-54394 Msa1418010:CDS 50.0%
!!! TTCCCCGTTTTGACTGGGTT+TGG - tig0024533:54380-54399 Msa1418010:CDS 50.0%
!!! TCCCCGTTTTGACTGGGTTT+GGG - tig0024533:54381-54400 Msa1418010:CDS 50.0%
ACCCAAACCCAGTCAAAACG+GGG + tig0024533:54385-54404 None:intergenic 50.0%
ACTGGGTTTGGGTATGGGTA+TGG - tig0024533:54392-54411 Msa1418010:CDS 50.0%
CTGGGTTTGGGTATGGGTAT+GGG - tig0024533:54393-54412 Msa1418010:CDS 50.0%
! TTTGGGACGGGTTTGGGTAT+GGG + tig0024533:54482-54501 None:intergenic 50.0%
! ATTTGGGACGGGTTTGGGTA+TGG + tig0024533:54483-54502 None:intergenic 50.0%
TTTCTCATCCCCGTTGGGTA+TGG - tig0024533:54767-54786 Msa1418010:CDS 50.0%
TTCTCATCCCCGTTGGGTAT+GGG - tig0024533:54768-54787 Msa1418010:CDS 50.0%
ATACCCTACCCATACCCAAC+GGG + tig0024533:54779-54798 None:intergenic 50.0%
GATACCCTACCCATACCCAA+CGG + tig0024533:54780-54799 None:intergenic 50.0%
GTTGGGTATGGGTAGGGTAT+CGG - tig0024533:54779-54798 Msa1418010:CDS 50.0%
! TTGGGTATGGGTAGGGTATC+GGG - tig0024533:54780-54799 Msa1418010:CDS 50.0%
GAGAATCGGGTATGTGGATG+GGG - tig0024533:54812-54831 Msa1418010:CDS 50.0%
CGTATCGTTAGGCATGGCAA+TGG + tig0024533:54864-54883 None:intergenic 50.0%
! TGAGAATCGGGTAGGGTATC+GGG - tig0024533:54895-54914 Msa1418010:intron 50.0%
GAGAATCGGGTATGTGGATG+GGG - tig0024533:54812-54831 Msa1418010:CDS 50.0%
CGTATCGTTAGGCATGGCAA+TGG + tig0024533:54864-54883 None:intergenic 50.0%
GGGGCTACTCCCGTAACAAT+GGG + tig0024533:52403-52422 None:intergenic 55.0%
TGGGGCTACTCCCGTAACAA+TGG + tig0024533:52404-52423 None:intergenic 55.0%
AGTAGCCCCACGTAAAGTGG+TGG - tig0024533:52414-52433 Msa1418010:three_prime_UTR 55.0%
GTAGCCCCACGTAAAGTGGT+GGG - tig0024533:52415-52434 Msa1418010:three_prime_UTR 55.0%
TAGCCCCACGTAAAGTGGTG+GGG - tig0024533:52416-52435 Msa1418010:three_prime_UTR 55.0%
ATTCCACCGTCCGCTTGCAA+GGG + tig0024533:52582-52601 None:intergenic 55.0%
AATTCCACCGTCCGCTTGCA+AGG + tig0024533:52583-52602 None:intergenic 55.0%
TTGCAAGCGGACGGTGGAAT+TGG - tig0024533:52582-52601 Msa1418010:CDS 55.0%
GTCTTCACTGGCATGGCTCT+CGG - tig0024533:53652-53671 Msa1418010:intron 55.0%
AAGAGCTTCTCGACTGCTGC+CGG - tig0024533:53949-53968 Msa1418010:intron 55.0%
GAAGCACGGACACGATACGT+AGG - tig0024533:54297-54316 Msa1418010:CDS 55.0%
ACGGACACGATACGTAGGCA+TGG - tig0024533:54302-54321 Msa1418010:CDS 55.0%
!! CGGGTTTTCCCCGTTTTGAC+TGG - tig0024533:54374-54393 Msa1418010:CDS 55.0%
TACGGGTATGGGACGGGTAA+CGG - tig0024533:54434-54453 Msa1418010:CDS 55.0%
!! GGGACGGGTAACGGGTATAT+AGG - tig0024533:54443-54462 Msa1418010:CDS 55.0%
TTTGGGTATGGGTTCGGGGT+GGG + tig0024533:54471-54490 None:intergenic 55.0%
ACGGGTTTGGGTATGGGTTC+GGG + tig0024533:54476-54495 None:intergenic 55.0%
! GACGGGTTTGGGTATGGGTT+CGG + tig0024533:54477-54496 None:intergenic 55.0%
ATCCCCGTTGGGTATGGGTA+GGG - tig0024533:54773-54792 Msa1418010:CDS 55.0%
TACCCTACCCATACCCAACG+GGG + tig0024533:54778-54797 None:intergenic 55.0%
ATCGGGTATGTGGATGGGGA+AGG - tig0024533:54816-54835 Msa1418010:CDS 55.0%
ATCGGGTATGTGGATGGGGA+AGG - tig0024533:54816-54835 Msa1418010:CDS 55.0%
GGGAGTAGCCCCACGTAAAG+TGG - tig0024533:52411-52430 Msa1418010:three_prime_UTR 60.0%
TGGCCCCACCACTTTACGTG+GGG + tig0024533:52422-52441 None:intergenic 60.0%
GTGGCCCCACCACTTTACGT+GGG + tig0024533:52423-52442 None:intergenic 60.0%
TGTGGCCCCACCACTTTACG+TGG + tig0024533:52424-52443 None:intergenic 60.0%
ATGTGCCCCTTGCAAGCGGA+CGG - tig0024533:52573-52592 Msa1418010:exon 60.0%
TTCCACCGTCCGCTTGCAAG+GGG + tig0024533:52581-52600 None:intergenic 60.0%
TTCACTGGCATGGCTCTCGG+TGG - tig0024533:53655-53674 Msa1418010:intron 60.0%
GGGTGGGTAACCGTGGGTAT+GGG + tig0024533:54336-54355 None:intergenic 60.0%
! TGGTTCGGGTGGGTAACCGT+GGG + tig0024533:54342-54361 None:intergenic 60.0%
!! TTGGTTCGGGTGGGTAACCG+TGG + tig0024533:54343-54362 None:intergenic 60.0%
ACGGGTATGGGACGGGTAAC+GGG - tig0024533:54435-54454 Msa1418010:CDS 60.0%
GTTTGGGTATGGGTTCGGGG+TGG + tig0024533:54472-54491 None:intergenic 60.0%
CGGGTTTGGGTATGGGTTCG+GGG + tig0024533:54475-54494 None:intergenic 60.0%
ATTCAATGCGGGGACGGGGA+TGG - tig0024533:54701-54720 Msa1418010:CDS 60.0%
TTCAATGCGGGGACGGGGAT+GGG - tig0024533:54702-54721 Msa1418010:CDS 60.0%
ATACCCAAACCCGTCGGGGA+CGG - tig0024533:54731-54750 Msa1418010:CDS 60.0%
CATCCCCGTTGGGTATGGGT+AGG - tig0024533:54772-54791 Msa1418010:CDS 60.0%
TTAGGCATGGCAATGGGGCG+GGG + tig0024533:54857-54876 None:intergenic 60.0%
GTTAGGCATGGCAATGGGGC+GGG + tig0024533:54858-54877 None:intergenic 60.0%
CGTTAGGCATGGCAATGGGG+CGG + tig0024533:54859-54878 None:intergenic 60.0%
TTAGGCATGGCAATGGGGCG+GGG + tig0024533:54857-54876 None:intergenic 60.0%
GTTAGGCATGGCAATGGGGC+GGG + tig0024533:54858-54877 None:intergenic 60.0%
CGTTAGGCATGGCAATGGGG+CGG + tig0024533:54859-54878 None:intergenic 60.0%
! CACACGTATCTGAGGCGTGC+TGG - tig0024533:55084-55103 Msa1418010:intron 60.0%
! GAGACGTGTCGACGGCGTAT+CGG - tig0024533:55106-55125 Msa1418010:intron 60.0%
CAGAGAAGAAGACCGCGGCG+TGG - tig0024533:53322-53341 Msa1418010:intron 65.0%
AGAAGAAGACCGCGGCGTGG+CGG - tig0024533:53325-53344 Msa1418010:intron 65.0%
! TCTGAAGTTCCGCCACGCCG+CGG + tig0024533:53337-53356 None:intergenic 65.0%
GCTTCTCGACTGCTGCCGGT+AGG - tig0024533:53953-53972 Msa1418010:intron 65.0%
CGGGTGGGTAACCGTGGGTA+TGG + tig0024533:54337-54356 None:intergenic 65.0%
TCAATGCGGGGACGGGGATG+GGG - tig0024533:54703-54722 Msa1418010:CDS 65.0%
GCGGGGATACCCAAACCCGT+CGG - tig0024533:54725-54744 Msa1418010:CDS 65.0%
CGGGGATACCCAAACCCGTC+GGG - tig0024533:54726-54745 Msa1418010:CDS 65.0%
GGGGATACCCAAACCCGTCG+GGG - tig0024533:54727-54746 Msa1418010:CDS 65.0%
TACCCAAACCCGTCGGGGAC+GGG - tig0024533:54732-54751 Msa1418010:CDS 65.0%
AATCCCATCCCCGTCCCCGA+CGG + tig0024533:54744-54763 None:intergenic 65.0%
GCGTGCTGGAGACGTGTCGA+CGG - tig0024533:55098-55117 Msa1418010:intron 65.0%
TGCCCCTTGCAAGCGGACGG+TGG - tig0024533:52576-52595 Msa1418010:exon 70.0%
ACCCAAACCCGTCGGGGACG+GGG - tig0024533:54733-54752 Msa1418010:CDS 70.0%
! TCCCCGTCCCCGACGGGTTT+GGG + tig0024533:54737-54756 None:intergenic 70.0%
! ATCCCCGTCCCCGACGGGTT+TGG + tig0024533:54738-54757 None:intergenic 70.0%
AAACCCGTCGGGGACGGGGA+TGG - tig0024533:54737-54756 Msa1418010:CDS 70.0%
AACCCGTCGGGGACGGGGAT+GGG - tig0024533:54738-54757 Msa1418010:CDS 70.0%
ATCCCATCCCCGTCCCCGAC+GGG + tig0024533:54743-54762 None:intergenic 70.0%
CAATGGGGCGGGGTGGGGAT+GGG + tig0024533:54847-54866 None:intergenic 70.0%
CATGGCAATGGGGCGGGGTG+GGG + tig0024533:54852-54871 None:intergenic 70.0%
GCATGGCAATGGGGCGGGGT+GGG + tig0024533:54853-54872 None:intergenic 70.0%
CAATGGGGCGGGGTGGGGAT+GGG + tig0024533:54847-54866 None:intergenic 70.0%
CATGGCAATGGGGCGGGGTG+GGG + tig0024533:54852-54871 None:intergenic 70.0%
GCATGGCAATGGGGCGGGGT+GGG + tig0024533:54853-54872 None:intergenic 70.0%
ATGCGGGGACGGGGATGGGG+CGG - tig0024533:54706-54725 Msa1418010:CDS 75.0%
GCAATGGGGCGGGGTGGGGA+TGG + tig0024533:54848-54867 None:intergenic 75.0%
GGCATGGCAATGGGGCGGGG+TGG + tig0024533:54854-54873 None:intergenic 75.0%
GCAATGGGGCGGGGTGGGGA+TGG + tig0024533:54848-54867 None:intergenic 75.0%
GGCATGGCAATGGGGCGGGG+TGG + tig0024533:54854-54873 None:intergenic 75.0%
! TGCGGGGACGGGGATGGGGC+GGG - tig0024533:54707-54726 Msa1418010:CDS 80.0%
! GCGGGGACGGGGATGGGGCG+GGG - tig0024533:54708-54727 Msa1418010:CDS 85.0%
Chromosome Type Strat End Strand Name
tig0024533 gene 52394 55728 52394 ID=Msa1418010;Name=Msa1418010
tig0024533 mRNA 52394 55728 52394 ID=Msa1418010-mRNA-1;Parent=Msa1418010;Name=Msa1418010-mRNA-1;_AED=0.07;_eAED=0.07;_QI=115|1|1|1|1|1|3|184|403
tig0024533 exon 52394 52725 52394 ID=Msa1418010-mRNA-1:exon:156;Parent=Msa1418010-mRNA-1
tig0024533 exon 53971 54911 53971 ID=Msa1418010-mRNA-1:exon:155;Parent=Msa1418010-mRNA-1
tig0024533 exon 55491 55728 55491 ID=Msa1418010-mRNA-1:exon:154;Parent=Msa1418010-mRNA-1
tig0024533 five_prime_UTR 55614 55728 55614 ID=Msa1418010-mRNA-1:five_prime_utr;Parent=Msa1418010-mRNA-1
tig0024533 CDS 55491 55613 55491 ID=Msa1418010-mRNA-1:cds;Parent=Msa1418010-mRNA-1
tig0024533 CDS 53971 54911 53971 ID=Msa1418010-mRNA-1:cds;Parent=Msa1418010-mRNA-1
tig0024533 CDS 52578 52725 52578 ID=Msa1418010-mRNA-1:cds;Parent=Msa1418010-mRNA-1
tig0024533 three_prime_UTR 52394 52577 52394 ID=Msa1418010-mRNA-1:three_prime_utr;Parent=Msa1418010-mRNA-1
Gene Sequence

>Msa1418010

ATGTTAAATCTTTTCAGTGTCAATTCTTACGGGGTAGCTATAAAGATTTTTGCTCTTGCTTTAAATGTGCCCCTTGCAAGCGGACGGTGGAATTGGTTCCCAAGACTAATCGGTCCTTACTGGGTAACGAATGAAGCATTAGTAAATAAGTTGATGGGCAGTGATGAAGCTCAACAGCTATTGCTTTCAGAGTCAAGGGAACATTCTCATCTCAATGAGAAGAGTGACCTTCTTCAGAGAAGAAGACCGCGGCGTGGCGGAACTTCAGAGACAGATATCAATCTGCAGCAAGAACAGAATGGTGTCCTCCAAACCCCTTTATCTCCACAATGTATAACTGATAAACAAGAAGCAGAATTCAAGTTCAGGCTAGTGTTCTTGTGTTTAGCAGCATACCTAGGCACAGGTACCTTATGTTTCTATCTAACAAGTTACCAAATTGAGGGCATAAAAACAAATAATTTTCTTGATGCCCTTTATTTCTGTGTTGTGACAATGACTACTGTTGGATATGGAGATCTTGTTCCAAATAGCACTATAGCAAAACTCCTTGCATGCATTTATGTCTTCACTGGCATGGCTCTCGGTGGCTTAATTCTTAGCAAAGCAGCAGATTACATTGTTGAGAAACAGGAAATATTTCTTGCTGAGTCCATGTGCAAGGCTGAAAATTTTGGTCTACAAGAGGTTGCTAAAGAGCTTGAAACTAAGAAAAGCAAATACAAGTTTGTGCTTGCAGTAGCCACTTTTTTTGTGCTCATGATTGCAGGAACTGTTTTTCTGTATTTTATTGAGAATCTAGATTTTGTGGATGCACTCTATTGTGTTTGTTCCACGGTCACTACTTTAGGTTATGGGGATAAGAGCTTCTCGACTGCTGCCGGTAGGATTTTTGCCGTGTTTTGGATATTGAGCAGCACCATTTGCTTGGCTCAGTCTTTTGCTTATCTTGCTGAACTCTATACTGAAGATAGACAAAGATCACTGGCAAAAATGGTTCTCACCCGAAAATTATCACTAAGTGATCTTGAGGCAGCAGATCTTGATGGAGACAAAGTTGTCAGTGCTGCAGAGTTTGTTGTATACAAGTTGAAGGAAATGGGAAAGATCAACCAAGAAGATATTTCAGCAGTGATGGAGAGTTTTAGAAAACTAGACTGTGATCAATCAGGAACTCTGACTGAAGCTGATATCAGAAATTTTGAATTCTGA

Protein sequence

>Msa1418010

MLNLFSVNSYGVAIKIFALALNVPLASGRWNWFPRLIGPYWVTNEALVNKLMGSDEAQQLLLSESREHSHLNEKSDLLQRRRPRRGGTSETDINLQQEQNGVLQTPLSPQCITDKQEAEFKFRLVFLCLAAYLGTGTLCFYLTSYQIEGIKTNNFLDALYFCVVTMTTVGYGDLVPNSTIAKLLACIYVFTGMALGGLILSKAADYIVEKQEIFLAESMCKAENFGLQEVAKELETKKSKYKFVLAVATFFVLMIAGTVFLYFIENLDFVDALYCVCSTVTTLGYGDKSFSTAAGRIFAVFWILSSTICLAQSFAYLAELYTEDRQRSLAKMVLTRKLSLSDLEAADLDGDKVVSAAEFVVYKLKEMGKINQEDISAVMESFRKLDCDQSGTLTEADIRNFEF*