AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0401860


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0401860 MtrunA17_Chr4g0016151 100.000 82 0 0 220 301 1 82 8.83e-55 172
Msa0401860 MtrunA17_CPg0492351 100.000 82 0 0 220 301 1 82 8.83e-55 172
Msa0401860 MtrunA17_Chr4g0000631 98.780 82 1 0 220 301 1 82 3.82e-54 171
Msa0401860 MtrunA17_Chr7g0229411 98.780 82 1 0 220 301 1 82 4.21e-54 171
Msa0401860 MtrunA17_Chr5g0435911 97.561 82 2 0 220 301 1 82 1.83e-52 166
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 134 sgRNAs with CRISPR-Local

Find 476 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGTTCATGGTTCGATATTC+TGG 0.185586 3_2:+28948282 None:intergenic
TGCACGCCTCCGTTACCTTT+TGG 0.196515 3_2:-28947277 Msa0401860:CDS
CAGCTCACGTACCGCTTTAA+TGG 0.245260 3_2:-28947636 Msa0401860:CDS
CAGAGAACCCATCGCTGTTT+TGG 0.269609 3_2:-28947903 Msa0401860:CDS
TCATGCCTTTACTTCGTTCA+TGG 0.272664 3_2:+28948269 None:intergenic
GGCTGTGATACCGGAGGCTC+TGG 0.279102 3_2:-28947882 Msa0401860:CDS
TCTCAGGTAGACAGTTTCTA+TGG 0.287253 3_2:+28947242 None:intergenic
GCACGAAAGGCGTAACGATC+TGG 0.311741 3_2:+28946978 None:intergenic
TCTAACGCCCACACCGGATA+TGG 0.325084 3_2:-28947687 Msa0401860:CDS
CTTCCCGGTCCTCTCGTACT+AGG 0.332779 3_2:-28947728 Msa0401860:CDS
CACCAGAGGTGCGTCCTTCC+CGG 0.345036 3_2:-28947743 Msa0401860:intron
TCCTCGGGCCAGACGGAGAT+TGG 0.349112 3_2:+28947306 None:intergenic
TCCCGTCGATGTGAGCTCTT+GGG 0.355274 3_2:-28947542 Msa0401860:CDS
CACCAACTTCCTTAACCTTC+CGG 0.362818 3_2:-28946853 Msa0401860:CDS
TTCACCGGGGCTTCGGTCGC+CGG 0.371598 3_2:-28946893 Msa0401860:CDS
ACCTCGATGTCGGCTCTAAC+AGG 0.379392 3_2:+28947510 None:intergenic
CAAAGTCGTAAGACCATGTA+TGG 0.380055 3_2:+28946810 None:intergenic
CATTAAAGCGGTACGTGAGC+TGG 0.384796 3_2:+28947637 None:intergenic
TTCCCGTCGATGTGAGCTCT+TGG 0.386490 3_2:-28947543 Msa0401860:CDS
AGCTCACGTACCGCTTTAAT+GGG 0.395506 3_2:-28947635 Msa0401860:CDS
GCCGCCGTTCACCGGGGCTT+CGG 0.397671 3_2:-28946900 Msa0401860:CDS
AATGGGAGAGCACTCATCTT+GGG 0.403795 3_2:-28947850 Msa0401860:CDS
TGCCCAGTGCCGGAAGGTTA+AGG 0.409134 3_2:+28946844 None:intergenic
CCCTTCTGCCTTTGCACTCG+AGG 0.411231 3_2:-28947330 Msa0401860:CDS
GGCTCTGGGGAAGTCGGAAT+GGG 0.415867 3_2:-28947867 Msa0401860:CDS
CTCACATCGACGGGAAGGTT+TGG 0.420533 3_2:+28947486 None:intergenic
CTCACATCGACGGGAAGGTT+TGG 0.420533 3_2:+28947550 None:intergenic
CTTCCTTAACCTTCCGGCAC+TGG 0.422146 3_2:-28946847 Msa0401860:CDS
TTCCCGGTCCTCTCGTACTA+GGG 0.424464 3_2:-28947727 Msa0401860:CDS
TGTAGTATGTTCCAAGGGTT+GGG 0.424624 3_2:+28947605 None:intergenic
TAGTTACGGCCGCCGTTCAC+CGG 0.432611 3_2:-28946908 Msa0401860:CDS
GGCTGACGCCTGCCCAGTGC+CGG 0.435469 3_2:+28946834 None:intergenic
TTAACCTTCCGGCACTGGGC+AGG 0.436659 3_2:-28946842 Msa0401860:CDS
AGTTACGGCCGCCGTTCACC+GGG 0.437053 3_2:-28946907 Msa0401860:CDS
AGTTGAACAATCAAAATAGA+TGG 0.442588 3_2:-28948112 Msa0401860:CDS
AGGCTCTGGGGAAGTCGGAA+TGG 0.446534 3_2:-28947868 Msa0401860:CDS
CCACCAAGTTCGGGATGGAT+TGG 0.447763 3_2:-28948329 None:intergenic
CTGTAGTATGTTCCAAGGGT+TGG 0.452990 3_2:+28947604 None:intergenic
TCGCCGGCTTCCCTGTCATC+AGG 0.453580 3_2:-28946877 Msa0401860:CDS
GAGACAGTTCGGTCCATATC+CGG 0.455659 3_2:+28947674 None:intergenic
ACAGACCAAGGGACAGTCTC+AGG 0.456050 3_2:+28947226 None:intergenic
CAGAACGTCGTGAGACAGTT+CGG 0.457061 3_2:+28947663 None:intergenic
GAAGCCGGCGACCGAAGCCC+CGG 0.461073 3_2:+28946889 None:intergenic
CCTTCTGCCTTTGCACTCGA+GGG 0.461384 3_2:-28947329 Msa0401860:CDS
GACTGTCCCTTGGTCTGTAC+TGG 0.464231 3_2:-28947221 Msa0401860:CDS
CCCCAAGAGCTCACATCGAC+GGG 0.472021 3_2:+28947477 None:intergenic
CCCCAAGAGCTCACATCGAC+GGG 0.472021 3_2:+28947541 None:intergenic
TACATGGTCTTACGACTTTG+CGG 0.476001 3_2:-28946807 Msa0401860:CDS
CTCGAGGGCCAATCTCCGTC+TGG 0.480699 3_2:-28947314 Msa0401860:CDS
TCCGACTTCCCCAGAGCCTC+CGG 0.482864 3_2:+28947872 None:intergenic
TGCCGGAAGGTTAAGGAAGT+TGG 0.485164 3_2:+28946851 None:intergenic
GAATGGGAGAGCACTCATCT+TGG 0.488857 3_2:-28947851 Msa0401860:CDS
ACAAGGAATTTCGCTACCTT+AGG 0.488888 3_2:-28946938 Msa0401860:CDS
GTTCGATATTCTGGTGTCCT+AGG 0.491135 3_2:+28948291 None:intergenic
CACGAAAGGCGTAACGATCT+GGG 0.491297 3_2:+28946979 None:intergenic
GAAGTTGGTGACCTGATGAC+AGG 0.495416 3_2:+28946866 None:intergenic
AGGTAGCGAAATTCCTTGTC+GGG 0.495901 3_2:+28946942 None:intergenic
ATTGCCTGATCGAATTGATC+AGG 0.499380 3_2:-28948087 Msa0401860:CDS
TTCCTTAACCTTCCGGCACT+GGG 0.504342 3_2:-28946846 Msa0401860:CDS
GCGACCGAAGCCCCGGTGAA+CGG 0.505900 3_2:+28946896 None:intergenic
CACTGTCTCGGAGAGAGGCT+CGG 0.506062 3_2:+28947002 None:intergenic
GATGTCGGCTCTTCGCCACC+TGG 0.508239 3_2:+28947579 None:intergenic
CTCAGGTAGACAGTTTCTAT+GGG 0.510655 3_2:+28947243 None:intergenic
CCCTCGAGTGCAAAGGCAGA+AGG 0.511073 3_2:+28947329 None:intergenic
AAGGTAGCGAAATTCCTTGT+CGG 0.511527 3_2:+28946941 None:intergenic
TAACGATCTGGGCACTGTCT+CGG 0.513539 3_2:+28946990 None:intergenic
ATGACCTGATCAATTCGATC+AGG 0.514268 3_2:+28948083 None:intergenic
GATCGTTACGCCTTTCGTGC+GGG 0.516913 3_2:-28946975 Msa0401860:CDS
TGACCTGATGACAGGGAAGC+CGG 0.518242 3_2:+28946874 None:intergenic
CCTTAGGACCGTTATAGTTA+CGG 0.519214 3_2:-28946922 Msa0401860:CDS
GCTGTGATACCGGAGGCTCT+GGG 0.521140 3_2:-28947881 Msa0401860:CDS
GAGGCGTGCAAAGGTTTCCT+CGG 0.526013 3_2:+28947290 None:intergenic
TTTCCCTAGTACGAGAGGAC+CGG 0.526023 3_2:+28947724 None:intergenic
AGGCGTGCAAAGGTTTCCTC+GGG 0.527025 3_2:+28947291 None:intergenic
CCCGTCGATGTGAGCTCTTG+GGG 0.534121 3_2:-28947541 Msa0401860:CDS
CCTTGGTCTGTACTGGCACA+AGG 0.538614 3_2:-28947214 Msa0401860:intron
ATTAAAGCGGTACGTGAGCT+GGG 0.539036 3_2:+28947638 None:intergenic
CTGGGCACTGTCTCGGAGAG+AGG 0.542198 3_2:+28946997 None:intergenic
AAGGTTTGGCACCTCGATGT+CGG 0.545826 3_2:+28947500 None:intergenic
AAGGTTTGGCACCTCGATGT+CGG 0.545826 3_2:+28947564 None:intergenic
TGGGCGAACAGCCCAACCCT+TGG 0.548090 3_2:-28947616 Msa0401860:CDS
GGTGTGGTTCCTCTATGCCT+AGG 0.554587 3_2:-28948308 Msa0401860:CDS
TTCCCTAGTACGAGAGGACC+GGG 0.554934 3_2:+28947725 None:intergenic
TCCCCAAGAGCTCACATCGA+CGG 0.555494 3_2:+28947476 None:intergenic
TCCCCAAGAGCTCACATCGA+CGG 0.555494 3_2:+28947540 None:intergenic
AAAGTCGTAAGACCATGTAT+GGG 0.556989 3_2:+28946811 None:intergenic
GCCAATCTCCGTCTGGCCCG+AGG 0.562208 3_2:-28947307 Msa0401860:CDS
TGGAGCTGTAGTATGTTCCA+AGG 0.564153 3_2:+28947599 None:intergenic
ACCGAAGCCCCGGTGAACGG+CGG 0.564471 3_2:+28946899 None:intergenic
AGATCGTTACGCCTTTCGTG+CGG 0.565799 3_2:-28946976 Msa0401860:CDS
ACCGGAGGCTCTGGGGAAGT+CGG 0.567230 3_2:-28947873 Msa0401860:CDS
TTCTGGTGTCCTAGGCATAG+AGG 0.567920 3_2:+28948299 None:intergenic
GACGCCTGCCCAGTGCCGGA+AGG 0.568365 3_2:+28946838 None:intergenic
CCGTAACTATAACGGTCCTA+AGG 0.574485 3_2:+28946922 None:intergenic
TTGGAACATACTACAGCTCC+AGG 0.579135 3_2:-28947597 Msa0401860:CDS
ATCACAGCCAAAACAGCGAT+GGG 0.580909 3_2:+28947896 None:intergenic
TAAGTTCCGACCCGCACGAA+AGG 0.581321 3_2:+28946965 None:intergenic
ATGGGAGAGCACTCATCTTG+GGG 0.585343 3_2:-28947849 Msa0401860:intron
GTCTACCTGAGACTGTCCCT+TGG 0.586612 3_2:-28947231 Msa0401860:CDS
GGTCCTCTCGTACTAGGGAA+AGG 0.589950 3_2:-28947722 Msa0401860:CDS
TATCACAGCCAAAACAGCGA+TGG 0.590214 3_2:+28947895 None:intergenic
AAGGTAACGGAGGCGTGCAA+AGG 0.595805 3_2:+28947281 None:intergenic
CCTCGAGTGCAAAGGCAGAA+GGG 0.595841 3_2:+28947330 None:intergenic
AAAGGTTTCCTCGGGCCAGA+CGG 0.597813 3_2:+28947299 None:intergenic
AACGGCGGCCGTAACTATAA+CGG 0.599287 3_2:+28946914 None:intergenic
CTGTGATACCGGAGGCTCTG+GGG 0.604212 3_2:-28947880 Msa0401860:CDS
GTTACGCCTTTCGTGCGGGT+CGG 0.605304 3_2:-28946971 Msa0401860:CDS
TGGGGCGTAGGCCTCCCAAA+AGG 0.606913 3_2:+28947262 None:intergenic
GTTCGGTCCATATCCGGTGT+GGG 0.608178 3_2:+28947680 None:intergenic
AAGAGCTCACATCGACGGGA+AGG 0.613365 3_2:+28947481 None:intergenic
AAGAGCTCACATCGACGGGA+AGG 0.613365 3_2:+28947545 None:intergenic
AGTTCGGTCCATATCCGGTG+TGG 0.618273 3_2:+28947679 None:intergenic
GGGCTGTTCGCCCATTAAAG+CGG 0.619701 3_2:+28947625 None:intergenic
AAGTCGTAAGACCATGTATG+GGG 0.621859 3_2:+28946812 None:intergenic
AGACAGTTTCTATGGGGCGT+AGG 0.622986 3_2:+28947250 None:intergenic
AAGTTGGTGACCTGATGACA+GGG 0.627282 3_2:+28946867 None:intergenic
GTAGGCCTCCCAAAAGGTAA+CGG 0.632223 3_2:+28947268 None:intergenic
AAGTTCGGGATGGATTGGTG+TGG 0.636372 3_2:-28948324 None:intergenic
GGAGCTGTAGTATGTTCCAA+GGG 0.640199 3_2:+28947600 None:intergenic
CCTTGTGCCAGTACAGACCA+AGG 0.645647 3_2:+28947214 None:intergenic
GGGTCGGAACTTACCCGACA+AGG 0.655880 3_2:-28946955 Msa0401860:CDS
GGACCTTTCCCTAGTACGAG+AGG 0.658731 3_2:+28947719 None:intergenic
CAATGCTCTAACGCCCACAC+CGG 0.666176 3_2:-28947693 Msa0401860:CDS
AGATTGGCCCTCGAGTGCAA+AGG 0.670375 3_2:+28947322 None:intergenic
GGCCTCCCAAAAGGTAACGG+AGG 0.683463 3_2:+28947271 None:intergenic
AGTCGTAAGACCATGTATGG+GGG 0.686647 3_2:+28946813 None:intergenic
CTAGTACGAGAGGACCGGGA+AGG 0.687441 3_2:+28947729 None:intergenic
CTTGTGCCAGTACAGACCAA+GGG 0.693537 3_2:+28947215 None:intergenic
GTGGGCGTTAGAGCATTGAG+AGG 0.697492 3_2:+28947698 None:intergenic
GTGGCGAAGAGCCGACATCG+AGG 0.704477 3_2:-28947575 Msa0401860:CDS
GCCTGTTAGAGCCGACATCG+AGG 0.709813 3_2:-28947511 Msa0401860:CDS
TCAGGTAGACAGTTTCTATG+GGG 0.720720 3_2:+28947244 None:intergenic
GTTACGGCCGCCGTTCACCG+GGG 0.732311 3_2:-28946906 Msa0401860:CDS
GAACATACTACAGCTCCAGG+TGG 0.771466 3_2:-28947594 Msa0401860:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AGTTGAACAATCAAAATAGA+TGG - chr3_2:28946991-28947010 Msa0401860:CDS 25.0%
! AACGGATAAAAGTTACTATA+GGG + chr3_2:28947668-28947687 None:intergenic 25.0%
! AGTTGAACAATCAAAATAGA+TGG - chr3_2:28946991-28947010 Msa0401860:CDS 25.0%
! AACGGATAAAAGTTACTATA+GGG + chr3_2:28947668-28947687 None:intergenic 25.0%
CACCTATCGTTAATGAAAAA+CGG - chr3_2:28947115-28947134 Msa0401860:intron 30.0%
!!! AGTTTTGAGAATTCAAGAGA+AGG + chr3_2:28947156-28947175 None:intergenic 30.0%
AAAGTTACTATAGGGATAAC+AGG + chr3_2:28947660-28947679 None:intergenic 30.0%
CAACGGATAAAAGTTACTAT+AGG + chr3_2:28947669-28947688 None:intergenic 30.0%
CACCTATCGTTAATGAAAAA+CGG - chr3_2:28947115-28947134 Msa0401860:intron 30.0%
!!! AGTTTTGAGAATTCAAGAGA+AGG + chr3_2:28947156-28947175 None:intergenic 30.0%
AAAGTTACTATAGGGATAAC+AGG + chr3_2:28947660-28947679 None:intergenic 30.0%
CAACGGATAAAAGTTACTAT+AGG + chr3_2:28947669-28947688 None:intergenic 30.0%
! CATATTGACTAGTCAATGTC+AGG - chr3_2:28946865-28946884 Msa0401860:CDS 35.0%
! AGAACAAGGTTCAAGTTTAC+TGG - chr3_2:28947046-28947065 Msa0401860:intron 35.0%
! TTCAAGTTTACTGGTCTGTT+AGG - chr3_2:28947055-28947074 Msa0401860:intron 35.0%
!!! AGCCGTTTTTCATTAACGAT+AGG + chr3_2:28947120-28947139 None:intergenic 35.0%
AAAGTCGTAAGACCATGTAT+GGG + chr3_2:28948295-28948314 None:intergenic 35.0%
! CATATTGACTAGTCAATGTC+AGG - chr3_2:28946865-28946884 Msa0401860:CDS 35.0%
! AGAACAAGGTTCAAGTTTAC+TGG - chr3_2:28947046-28947065 Msa0401860:intron 35.0%
! TTCAAGTTTACTGGTCTGTT+AGG - chr3_2:28947055-28947074 Msa0401860:intron 35.0%
!!! AGCCGTTTTTCATTAACGAT+AGG + chr3_2:28947120-28947139 None:intergenic 35.0%
AAAGTCGTAAGACCATGTAT+GGG + chr3_2:28948295-28948314 None:intergenic 35.0%
TCGTTCATGGTTCGATATTC+TGG + chr3_2:28946824-28946843 None:intergenic 40.0%
TCGAACCATGAACGAAGTAA+AGG - chr3_2:28946829-28946848 Msa0401860:CDS 40.0%
TCATGCCTTTACTTCGTTCA+TGG + chr3_2:28946837-28946856 None:intergenic 40.0%
TTGAATAGCTAGGGATGGAA+GGG + chr3_2:28946929-28946948 None:intergenic 40.0%
TTCCATCCCTAGCTATTCAA+GGG - chr3_2:28946929-28946948 Msa0401860:CDS 40.0%
ATTGCCTGATCGAATTGATC+AGG - chr3_2:28947016-28947035 Msa0401860:CDS 40.0%
ATGACCTGATCAATTCGATC+AGG + chr3_2:28947023-28947042 None:intergenic 40.0%
GATCAGGTCATGTAAGAACA+AGG - chr3_2:28947032-28947051 Msa0401860:CDS 40.0%
CATTAACGATAGGTGTCAAG+TGG + chr3_2:28947110-28947129 None:intergenic 40.0%
GAGAATTCAAGAGAAGGTCA+CGG + chr3_2:28947150-28947169 None:intergenic 40.0%
TGTAGTATGTTCCAAGGGTT+GGG + chr3_2:28947501-28947520 None:intergenic 40.0%
! AACTTTTATCCGTTGAGCGA+CGG - chr3_2:28947674-28947693 Msa0401860:CDS 40.0%
TCAGGTAGACAGTTTCTATG+GGG + chr3_2:28947862-28947881 None:intergenic 40.0%
CTCAGGTAGACAGTTTCTAT+GGG + chr3_2:28947863-28947882 None:intergenic 40.0%
TCTCAGGTAGACAGTTTCTA+TGG + chr3_2:28947864-28947883 None:intergenic 40.0%
AAGGTAGCGAAATTCCTTGT+CGG + chr3_2:28948165-28948184 None:intergenic 40.0%
ACAAGGAATTTCGCTACCTT+AGG - chr3_2:28948165-28948184 Msa0401860:intron 40.0%
CCTTAGGACCGTTATAGTTA+CGG - chr3_2:28948181-28948200 Msa0401860:intron 40.0%
AAGTCGTAAGACCATGTATG+GGG + chr3_2:28948294-28948313 None:intergenic 40.0%
CAAAGTCGTAAGACCATGTA+TGG + chr3_2:28948296-28948315 None:intergenic 40.0%
! TACATGGTCTTACGACTTTG+CGG - chr3_2:28948296-28948315 Msa0401860:CDS 40.0%
TCGTTCATGGTTCGATATTC+TGG + chr3_2:28946824-28946843 None:intergenic 40.0%
TCGAACCATGAACGAAGTAA+AGG - chr3_2:28946829-28946848 Msa0401860:CDS 40.0%
TCATGCCTTTACTTCGTTCA+TGG + chr3_2:28946837-28946856 None:intergenic 40.0%
TTGAATAGCTAGGGATGGAA+GGG + chr3_2:28946929-28946948 None:intergenic 40.0%
TTCCATCCCTAGCTATTCAA+GGG - chr3_2:28946929-28946948 Msa0401860:CDS 40.0%
ATTGCCTGATCGAATTGATC+AGG - chr3_2:28947016-28947035 Msa0401860:CDS 40.0%
ATGACCTGATCAATTCGATC+AGG + chr3_2:28947023-28947042 None:intergenic 40.0%
GATCAGGTCATGTAAGAACA+AGG - chr3_2:28947032-28947051 Msa0401860:CDS 40.0%
CATTAACGATAGGTGTCAAG+TGG + chr3_2:28947110-28947129 None:intergenic 40.0%
GAGAATTCAAGAGAAGGTCA+CGG + chr3_2:28947150-28947169 None:intergenic 40.0%
TGTAGTATGTTCCAAGGGTT+GGG + chr3_2:28947501-28947520 None:intergenic 40.0%
! AACTTTTATCCGTTGAGCGA+CGG - chr3_2:28947674-28947693 Msa0401860:CDS 40.0%
TCAGGTAGACAGTTTCTATG+GGG + chr3_2:28947862-28947881 None:intergenic 40.0%
CTCAGGTAGACAGTTTCTAT+GGG + chr3_2:28947863-28947882 None:intergenic 40.0%
TCTCAGGTAGACAGTTTCTA+TGG + chr3_2:28947864-28947883 None:intergenic 40.0%
AAGGTAGCGAAATTCCTTGT+CGG + chr3_2:28948165-28948184 None:intergenic 40.0%
ACAAGGAATTTCGCTACCTT+AGG - chr3_2:28948165-28948184 Msa0401860:intron 40.0%
CCTTAGGACCGTTATAGTTA+CGG - chr3_2:28948181-28948200 Msa0401860:intron 40.0%
AAGTCGTAAGACCATGTATG+GGG + chr3_2:28948294-28948313 None:intergenic 40.0%
CAAAGTCGTAAGACCATGTA+TGG + chr3_2:28948296-28948315 None:intergenic 40.0%
! TACATGGTCTTACGACTTTG+CGG - chr3_2:28948296-28948315 Msa0401860:CDS 40.0%
GTTCGATATTCTGGTGTCCT+AGG + chr3_2:28946815-28946834 None:intergenic 45.0%
GTCAGGTCCTAATTCTTGAC+TGG - chr3_2:28946882-28946901 Msa0401860:CDS 45.0%
GTCCTAATTCTTGACTGGAG+AGG - chr3_2:28946887-28946906 Msa0401860:CDS 45.0%
GTCCTCTCCAGTCAAGAATT+AGG + chr3_2:28946892-28946911 None:intergenic 45.0%
CTTGAATAGCTAGGGATGGA+AGG + chr3_2:28946930-28946949 None:intergenic 45.0%
CTTCCATCCCTAGCTATTCA+AGG - chr3_2:28946928-28946947 Msa0401860:CDS 45.0%
ATCCCTTGAATAGCTAGGGA+TGG + chr3_2:28946934-28946953 None:intergenic 45.0%
ATCCCTAGCTATTCAAGGGA+TGG - chr3_2:28946933-28946952 Msa0401860:CDS 45.0%
TCCCTAGCTATTCAAGGGAT+GGG - chr3_2:28946934-28946953 Msa0401860:CDS 45.0%
TGCAGTAATGTATGCAGCTG+AGG + chr3_2:28947084-28947103 None:intergenic 45.0%
ATCACAGCCAAAACAGCGAT+GGG + chr3_2:28947210-28947229 None:intergenic 45.0%
TATCACAGCCAAAACAGCGA+TGG + chr3_2:28947211-28947230 None:intergenic 45.0%
!! AATGGGAGAGCACTCATCTT+GGG - chr3_2:28947253-28947272 Msa0401860:CDS 45.0%
TTTACCGTTGGCACGATAAC+TGG - chr3_2:28947335-28947354 Msa0401860:CDS 45.0%
ATTAAAGCGGTACGTGAGCT+GGG + chr3_2:28947468-28947487 None:intergenic 45.0%
AGCTCACGTACCGCTTTAAT+GGG - chr3_2:28947468-28947487 Msa0401860:intron 45.0%
CTGTAGTATGTTCCAAGGGT+TGG + chr3_2:28947502-28947521 None:intergenic 45.0%
GGAGCTGTAGTATGTTCCAA+GGG + chr3_2:28947506-28947525 None:intergenic 45.0%
TGGAGCTGTAGTATGTTCCA+AGG + chr3_2:28947507-28947526 None:intergenic 45.0%
TTGGAACATACTACAGCTCC+AGG - chr3_2:28947506-28947525 Msa0401860:CDS 45.0%
!! GAATTCTAGCTCTTCCAGAG+TGG - chr3_2:28947915-28947934 Msa0401860:intron 45.0%
TTCATAGGGTCTTTCTGTCC+AGG - chr3_2:28948040-28948059 Msa0401860:intron 45.0%
AGGTAGCGAAATTCCTTGTC+GGG + chr3_2:28948164-28948183 None:intergenic 45.0%
CCGTAACTATAACGGTCCTA+AGG + chr3_2:28948184-28948203 None:intergenic 45.0%
!! AAGTTGGTGACCTGATGACA+GGG + chr3_2:28948239-28948258 None:intergenic 45.0%
CACCAACTTCCTTAACCTTC+CGG - chr3_2:28948250-28948269 Msa0401860:intron 45.0%
AGTCGTAAGACCATGTATGG+GGG + chr3_2:28948293-28948312 None:intergenic 45.0%
! TTTGCGGAGACCTGTGTTTT+TGG - chr3_2:28948312-28948331 Msa0401860:CDS 45.0%
GTTCGATATTCTGGTGTCCT+AGG + chr3_2:28946815-28946834 None:intergenic 45.0%
GTCAGGTCCTAATTCTTGAC+TGG - chr3_2:28946882-28946901 Msa0401860:CDS 45.0%
GTCCTAATTCTTGACTGGAG+AGG - chr3_2:28946887-28946906 Msa0401860:CDS 45.0%
GTCCTCTCCAGTCAAGAATT+AGG + chr3_2:28946892-28946911 None:intergenic 45.0%
CTTGAATAGCTAGGGATGGA+AGG + chr3_2:28946930-28946949 None:intergenic 45.0%
CTTCCATCCCTAGCTATTCA+AGG - chr3_2:28946928-28946947 Msa0401860:CDS 45.0%
ATCCCTTGAATAGCTAGGGA+TGG + chr3_2:28946934-28946953 None:intergenic 45.0%
ATCCCTAGCTATTCAAGGGA+TGG - chr3_2:28946933-28946952 Msa0401860:CDS 45.0%
TCCCTAGCTATTCAAGGGAT+GGG - chr3_2:28946934-28946953 Msa0401860:CDS 45.0%
TGCAGTAATGTATGCAGCTG+AGG + chr3_2:28947084-28947103 None:intergenic 45.0%
ATCACAGCCAAAACAGCGAT+GGG + chr3_2:28947210-28947229 None:intergenic 45.0%
TATCACAGCCAAAACAGCGA+TGG + chr3_2:28947211-28947230 None:intergenic 45.0%
!! AATGGGAGAGCACTCATCTT+GGG - chr3_2:28947253-28947272 Msa0401860:CDS 45.0%
TTTACCGTTGGCACGATAAC+TGG - chr3_2:28947335-28947354 Msa0401860:CDS 45.0%
ATTAAAGCGGTACGTGAGCT+GGG + chr3_2:28947468-28947487 None:intergenic 45.0%
AGCTCACGTACCGCTTTAAT+GGG - chr3_2:28947468-28947487 Msa0401860:intron 45.0%
CTGTAGTATGTTCCAAGGGT+TGG + chr3_2:28947502-28947521 None:intergenic 45.0%
GGAGCTGTAGTATGTTCCAA+GGG + chr3_2:28947506-28947525 None:intergenic 45.0%
TGGAGCTGTAGTATGTTCCA+AGG + chr3_2:28947507-28947526 None:intergenic 45.0%
TTGGAACATACTACAGCTCC+AGG - chr3_2:28947506-28947525 Msa0401860:CDS 45.0%
!! GAATTCTAGCTCTTCCAGAG+TGG - chr3_2:28947915-28947934 Msa0401860:intron 45.0%
TTCATAGGGTCTTTCTGTCC+AGG - chr3_2:28948040-28948059 Msa0401860:intron 45.0%
AGGTAGCGAAATTCCTTGTC+GGG + chr3_2:28948164-28948183 None:intergenic 45.0%
CCGTAACTATAACGGTCCTA+AGG + chr3_2:28948184-28948203 None:intergenic 45.0%
!! AAGTTGGTGACCTGATGACA+GGG + chr3_2:28948239-28948258 None:intergenic 45.0%
CACCAACTTCCTTAACCTTC+CGG - chr3_2:28948250-28948269 Msa0401860:intron 45.0%
AGTCGTAAGACCATGTATGG+GGG + chr3_2:28948293-28948312 None:intergenic 45.0%
! TTTGCGGAGACCTGTGTTTT+TGG - chr3_2:28948312-28948331 Msa0401860:CDS 45.0%
TTCTGGTGTCCTAGGCATAG+AGG + chr3_2:28946807-28946826 None:intergenic 50.0%
TTGACTGGAGAGGACACCAA+AGG - chr3_2:28946897-28946916 Msa0401860:CDS 50.0%
CCCCATCCCTTGAATAGCTA+GGG + chr3_2:28946938-28946957 None:intergenic 50.0%
CCCTAGCTATTCAAGGGATG+GGG - chr3_2:28946935-28946954 Msa0401860:CDS 50.0%
CCTAGCTATTCAAGGGATGG+GGG - chr3_2:28946936-28946955 Msa0401860:CDS 50.0%
! CAGAGAACCCATCGCTGTTT+TGG - chr3_2:28947200-28947219 Msa0401860:intron 50.0%
!!! CGCTGTTTTGGCTGTGATAC+CGG - chr3_2:28947212-28947231 Msa0401860:intron 50.0%
!!! TGTTTTGGCTGTGATACCGG+AGG - chr3_2:28947215-28947234 Msa0401860:CDS 50.0%
!! GAATGGGAGAGCACTCATCT+TGG - chr3_2:28947252-28947271 Msa0401860:CDS 50.0%
!! ATGGGAGAGCACTCATCTTG+GGG - chr3_2:28947254-28947273 Msa0401860:CDS 50.0%
TGTGCCAGTTATCGTGCCAA+CGG + chr3_2:28947342-28947361 None:intergenic 50.0%
TTTCCCTAGTACGAGAGGAC+CGG + chr3_2:28947382-28947401 None:intergenic 50.0%
GAGACAGTTCGGTCCATATC+CGG + chr3_2:28947432-28947451 None:intergenic 50.0%
CAGAACGTCGTGAGACAGTT+CGG + chr3_2:28947443-28947462 None:intergenic 50.0%
CATTAAAGCGGTACGTGAGC+TGG + chr3_2:28947469-28947488 None:intergenic 50.0%
CAGCTCACGTACCGCTTTAA+TGG - chr3_2:28947467-28947486 Msa0401860:intron 50.0%
GAACATACTACAGCTCCAGG+TGG - chr3_2:28947509-28947528 Msa0401860:CDS 50.0%
AAGGTTTGGCACCTCGATGT+CGG + chr3_2:28947542-28947561 None:intergenic 50.0%
AAGGTTTGGCACCTCGATGT+CGG + chr3_2:28947542-28947561 None:intergenic 50.0%
GTAGGCCTCCCAAAAGGTAA+CGG + chr3_2:28947838-28947857 None:intergenic 50.0%
AGACAGTTTCTATGGGGCGT+AGG + chr3_2:28947856-28947875 None:intergenic 50.0%
CTTGTGCCAGTACAGACCAA+GGG + chr3_2:28947891-28947910 None:intergenic 50.0%
CCATCAGTGAGATACCACTC+TGG + chr3_2:28947932-28947951 None:intergenic 50.0%
CCAGAGTGGTATCTCACTGA+TGG - chr3_2:28947929-28947948 Msa0401860:intron 50.0%
GCTTAGGTGGAAGGCAAAGA+AGG + chr3_2:28947977-28947996 None:intergenic 50.0%
! CTTTTCCTGTGCAGCTTAGG+TGG + chr3_2:28947990-28948009 None:intergenic 50.0%
AAAAGCCCAAAGCCAATCCC+AGG - chr3_2:28948005-28948024 Msa0401860:intron 50.0%
AAAGCCCAAAGCCAATCCCA+GGG - chr3_2:28948006-28948025 Msa0401860:intron 50.0%
!! TGTTCCCTGGGATTGGCTTT+GGG + chr3_2:28948013-28948032 None:intergenic 50.0%
! ATGAAGCGTCACTGTTCCCT+GGG + chr3_2:28948025-28948044 None:intergenic 50.0%
! TATGAAGCGTCACTGTTCCC+TGG + chr3_2:28948026-28948045 None:intergenic 50.0%
AGGGAACAGTGACGCTTCAT+AGG - chr3_2:28948025-28948044 Msa0401860:intron 50.0%
GGGAACAGTGACGCTTCATA+GGG - chr3_2:28948026-28948045 Msa0401860:intron 50.0%
! TAACGATCTGGGCACTGTCT+CGG + chr3_2:28948116-28948135 None:intergenic 50.0%
! CACGAAAGGCGTAACGATCT+GGG + chr3_2:28948127-28948146 None:intergenic 50.0%
AGATCGTTACGCCTTTCGTG+CGG - chr3_2:28948127-28948146 Msa0401860:CDS 50.0%
AACGGCGGCCGTAACTATAA+CGG + chr3_2:28948192-28948211 None:intergenic 50.0%
!! GAAGTTGGTGACCTGATGAC+AGG + chr3_2:28948240-28948259 None:intergenic 50.0%
TGCCGGAAGGTTAAGGAAGT+TGG + chr3_2:28948255-28948274 None:intergenic 50.0%
TTCCTTAACCTTCCGGCACT+GGG - chr3_2:28948257-28948276 Msa0401860:intron 50.0%
TTCTGGTGTCCTAGGCATAG+AGG + chr3_2:28946807-28946826 None:intergenic 50.0%
TTGACTGGAGAGGACACCAA+AGG - chr3_2:28946897-28946916 Msa0401860:CDS 50.0%
CCCCATCCCTTGAATAGCTA+GGG + chr3_2:28946938-28946957 None:intergenic 50.0%
CCCTAGCTATTCAAGGGATG+GGG - chr3_2:28946935-28946954 Msa0401860:CDS 50.0%
CCTAGCTATTCAAGGGATGG+GGG - chr3_2:28946936-28946955 Msa0401860:CDS 50.0%
! CAGAGAACCCATCGCTGTTT+TGG - chr3_2:28947200-28947219 Msa0401860:intron 50.0%
!!! CGCTGTTTTGGCTGTGATAC+CGG - chr3_2:28947212-28947231 Msa0401860:intron 50.0%
!!! TGTTTTGGCTGTGATACCGG+AGG - chr3_2:28947215-28947234 Msa0401860:CDS 50.0%
!! GAATGGGAGAGCACTCATCT+TGG - chr3_2:28947252-28947271 Msa0401860:CDS 50.0%
!! ATGGGAGAGCACTCATCTTG+GGG - chr3_2:28947254-28947273 Msa0401860:CDS 50.0%
TGTGCCAGTTATCGTGCCAA+CGG + chr3_2:28947342-28947361 None:intergenic 50.0%
TTTCCCTAGTACGAGAGGAC+CGG + chr3_2:28947382-28947401 None:intergenic 50.0%
GAGACAGTTCGGTCCATATC+CGG + chr3_2:28947432-28947451 None:intergenic 50.0%
CAGAACGTCGTGAGACAGTT+CGG + chr3_2:28947443-28947462 None:intergenic 50.0%
CATTAAAGCGGTACGTGAGC+TGG + chr3_2:28947469-28947488 None:intergenic 50.0%
CAGCTCACGTACCGCTTTAA+TGG - chr3_2:28947467-28947486 Msa0401860:intron 50.0%
GAACATACTACAGCTCCAGG+TGG - chr3_2:28947509-28947528 Msa0401860:CDS 50.0%
AAGGTTTGGCACCTCGATGT+CGG + chr3_2:28947542-28947561 None:intergenic 50.0%
AAGGTTTGGCACCTCGATGT+CGG + chr3_2:28947542-28947561 None:intergenic 50.0%
GTAGGCCTCCCAAAAGGTAA+CGG + chr3_2:28947838-28947857 None:intergenic 50.0%
AGACAGTTTCTATGGGGCGT+AGG + chr3_2:28947856-28947875 None:intergenic 50.0%
CTTGTGCCAGTACAGACCAA+GGG + chr3_2:28947891-28947910 None:intergenic 50.0%
CCATCAGTGAGATACCACTC+TGG + chr3_2:28947932-28947951 None:intergenic 50.0%
CCAGAGTGGTATCTCACTGA+TGG - chr3_2:28947929-28947948 Msa0401860:intron 50.0%
GCTTAGGTGGAAGGCAAAGA+AGG + chr3_2:28947977-28947996 None:intergenic 50.0%
! CTTTTCCTGTGCAGCTTAGG+TGG + chr3_2:28947990-28948009 None:intergenic 50.0%
AAAAGCCCAAAGCCAATCCC+AGG - chr3_2:28948005-28948024 Msa0401860:intron 50.0%
AAAGCCCAAAGCCAATCCCA+GGG - chr3_2:28948006-28948025 Msa0401860:intron 50.0%
!! TGTTCCCTGGGATTGGCTTT+GGG + chr3_2:28948013-28948032 None:intergenic 50.0%
! ATGAAGCGTCACTGTTCCCT+GGG + chr3_2:28948025-28948044 None:intergenic 50.0%
! TATGAAGCGTCACTGTTCCC+TGG + chr3_2:28948026-28948045 None:intergenic 50.0%
AGGGAACAGTGACGCTTCAT+AGG - chr3_2:28948025-28948044 Msa0401860:intron 50.0%
GGGAACAGTGACGCTTCATA+GGG - chr3_2:28948026-28948045 Msa0401860:intron 50.0%
! TAACGATCTGGGCACTGTCT+CGG + chr3_2:28948116-28948135 None:intergenic 50.0%
! CACGAAAGGCGTAACGATCT+GGG + chr3_2:28948127-28948146 None:intergenic 50.0%
AGATCGTTACGCCTTTCGTG+CGG - chr3_2:28948127-28948146 Msa0401860:CDS 50.0%
AACGGCGGCCGTAACTATAA+CGG + chr3_2:28948192-28948211 None:intergenic 50.0%
!! GAAGTTGGTGACCTGATGAC+AGG + chr3_2:28948240-28948259 None:intergenic 50.0%
TGCCGGAAGGTTAAGGAAGT+TGG + chr3_2:28948255-28948274 None:intergenic 50.0%
TTCCTTAACCTTCCGGCACT+GGG - chr3_2:28948257-28948276 Msa0401860:intron 50.0%
GGTGTGGTTCCTCTATGCCT+AGG - chr3_2:28946795-28946814 Msa0401860:CDS 55.0%
CCCCCATCCCTTGAATAGCT+AGG + chr3_2:28946939-28946958 None:intergenic 55.0%
ATTCAAGGGATGGGGGACAG+AGG - chr3_2:28946943-28946962 Msa0401860:CDS 55.0%
! TTCTTTTGCTCCATCCCCGC+AGG - chr3_2:28947175-28947194 Msa0401860:intron 55.0%
! TCTTTTGCTCCATCCCCGCA+GGG - chr3_2:28947176-28947195 Msa0401860:intron 55.0%
!! GAGAGCACTCATCTTGGGGT+GGG - chr3_2:28947258-28947277 Msa0401860:CDS 55.0%
AAACGCTGGGTAGCCAAGTG+CGG + chr3_2:28947318-28947337 None:intergenic 55.0%
TCGTGCCAACGGTAAACGCT+GGG + chr3_2:28947331-28947350 None:intergenic 55.0%
ATCGTGCCAACGGTAAACGC+TGG + chr3_2:28947332-28947351 None:intergenic 55.0%
CACGATAACTGGCACACCAG+AGG - chr3_2:28947346-28947365 Msa0401860:intron 55.0%
TTCCCGGTCCTCTCGTACTA+GGG - chr3_2:28947376-28947395 Msa0401860:intron 55.0%
TTCCCTAGTACGAGAGGACC+GGG + chr3_2:28947381-28947400 None:intergenic 55.0%
GGTCCTCTCGTACTAGGGAA+AGG - chr3_2:28947381-28947400 Msa0401860:intron 55.0%
GGACCTTTCCCTAGTACGAG+AGG + chr3_2:28947387-28947406 None:intergenic 55.0%
!! GTGGGCGTTAGAGCATTGAG+AGG + chr3_2:28947408-28947427 None:intergenic 55.0%
CAATGCTCTAACGCCCACAC+CGG - chr3_2:28947410-28947429 Msa0401860:intron 55.0%
TCTAACGCCCACACCGGATA+TGG - chr3_2:28947416-28947435 Msa0401860:intron 55.0%
GTTCGGTCCATATCCGGTGT+GGG + chr3_2:28947426-28947445 None:intergenic 55.0%
AGTTCGGTCCATATCCGGTG+TGG + chr3_2:28947427-28947446 None:intergenic 55.0%
GGGCTGTTCGCCCATTAAAG+CGG + chr3_2:28947481-28947500 None:intergenic 55.0%
CTCACATCGACGGGAAGGTT+TGG + chr3_2:28947556-28947575 None:intergenic 55.0%
AAGAGCTCACATCGACGGGA+AGG + chr3_2:28947561-28947580 None:intergenic 55.0%
TTCCCGTCGATGTGAGCTCT+TGG - chr3_2:28947560-28947579 Msa0401860:CDS 55.0%
TCCCGTCGATGTGAGCTCTT+GGG - chr3_2:28947561-28947580 Msa0401860:CDS 55.0%
TCCCCAAGAGCTCACATCGA+CGG + chr3_2:28947566-28947585 None:intergenic 55.0%
!! ACCTCGATGTCGGCTCTAAC+AGG + chr3_2:28947596-28947615 None:intergenic 55.0%
CTCACATCGACGGGAAGGTT+TGG + chr3_2:28947556-28947575 None:intergenic 55.0%
AAGAGCTCACATCGACGGGA+AGG + chr3_2:28947561-28947580 None:intergenic 55.0%
TTCCCGTCGATGTGAGCTCT+TGG - chr3_2:28947560-28947579 Msa0401860:CDS 55.0%
TCCCGTCGATGTGAGCTCTT+GGG - chr3_2:28947561-28947580 Msa0401860:CDS 55.0%
TCCCCAAGAGCTCACATCGA+CGG + chr3_2:28947566-28947585 None:intergenic 55.0%
AGTCGGCCTTAGTGATCCGA+CGG + chr3_2:28947715-28947734 None:intergenic 55.0%
CCTCGAGTGCAAAGGCAGAA+GGG + chr3_2:28947776-28947795 None:intergenic 55.0%
CCTTCTGCCTTTGCACTCGA+GGG - chr3_2:28947774-28947793 Msa0401860:intron 55.0%
! AGATTGGCCCTCGAGTGCAA+AGG + chr3_2:28947784-28947803 None:intergenic 55.0%
AAAGGTTTCCTCGGGCCAGA+CGG + chr3_2:28947807-28947826 None:intergenic 55.0%
AGGCGTGCAAAGGTTTCCTC+GGG + chr3_2:28947815-28947834 None:intergenic 55.0%
GAGGCGTGCAAAGGTTTCCT+CGG + chr3_2:28947816-28947835 None:intergenic 55.0%
!! AAGGTAACGGAGGCGTGCAA+AGG + chr3_2:28947825-28947844 None:intergenic 55.0%
! TGCACGCCTCCGTTACCTTT+TGG - chr3_2:28947826-28947845 Msa0401860:intron 55.0%
! GCACGCCTCCGTTACCTTTT+GGG - chr3_2:28947827-28947846 Msa0401860:intron 55.0%
GTCTACCTGAGACTGTCCCT+TGG - chr3_2:28947872-28947891 Msa0401860:CDS 55.0%
ACAGACCAAGGGACAGTCTC+AGG + chr3_2:28947880-28947899 None:intergenic 55.0%
GACTGTCCCTTGGTCTGTAC+TGG - chr3_2:28947882-28947901 Msa0401860:CDS 55.0%
CCTTGTGCCAGTACAGACCA+AGG + chr3_2:28947892-28947911 None:intergenic 55.0%
! CCTTGGTCTGTACTGGCACA+AGG - chr3_2:28947889-28947908 Msa0401860:CDS 55.0%
AGGCAAAGAAGGCCTCCTTC+CGG + chr3_2:28947966-28947985 None:intergenic 55.0%
TCCTGTGCAGCTTAGGTGGA+AGG + chr3_2:28947986-28948005 None:intergenic 55.0%
! GGGCTTTTCCTGTGCAGCTT+AGG + chr3_2:28947993-28948012 None:intergenic 55.0%
!! CTGTTCCCTGGGATTGGCTT+TGG + chr3_2:28948014-28948033 None:intergenic 55.0%
AGATGCGAACTACCTGCACC+TGG + chr3_2:28948061-28948080 None:intergenic 55.0%
! GCACGAAAGGCGTAACGATC+TGG + chr3_2:28948128-28948147 None:intergenic 55.0%
GATCGTTACGCCTTTCGTGC+GGG - chr3_2:28948128-28948147 Msa0401860:CDS 55.0%
TAAGTTCCGACCCGCACGAA+AGG + chr3_2:28948141-28948160 None:intergenic 55.0%
TGACCTGATGACAGGGAAGC+CGG + chr3_2:28948232-28948251 None:intergenic 55.0%
CTTCCTTAACCTTCCGGCAC+TGG - chr3_2:28948256-28948275 Msa0401860:intron 55.0%
GGTGTGGTTCCTCTATGCCT+AGG - chr3_2:28946795-28946814 Msa0401860:CDS 55.0%
CCCCCATCCCTTGAATAGCT+AGG + chr3_2:28946939-28946958 None:intergenic 55.0%
ATTCAAGGGATGGGGGACAG+AGG - chr3_2:28946943-28946962 Msa0401860:CDS 55.0%
! TTCTTTTGCTCCATCCCCGC+AGG - chr3_2:28947175-28947194 Msa0401860:intron 55.0%
! TCTTTTGCTCCATCCCCGCA+GGG - chr3_2:28947176-28947195 Msa0401860:intron 55.0%
!! GAGAGCACTCATCTTGGGGT+GGG - chr3_2:28947258-28947277 Msa0401860:CDS 55.0%
AAACGCTGGGTAGCCAAGTG+CGG + chr3_2:28947318-28947337 None:intergenic 55.0%
TCGTGCCAACGGTAAACGCT+GGG + chr3_2:28947331-28947350 None:intergenic 55.0%
ATCGTGCCAACGGTAAACGC+TGG + chr3_2:28947332-28947351 None:intergenic 55.0%
CACGATAACTGGCACACCAG+AGG - chr3_2:28947346-28947365 Msa0401860:intron 55.0%
TTCCCGGTCCTCTCGTACTA+GGG - chr3_2:28947376-28947395 Msa0401860:intron 55.0%
TTCCCTAGTACGAGAGGACC+GGG + chr3_2:28947381-28947400 None:intergenic 55.0%
GGTCCTCTCGTACTAGGGAA+AGG - chr3_2:28947381-28947400 Msa0401860:intron 55.0%
GGACCTTTCCCTAGTACGAG+AGG + chr3_2:28947387-28947406 None:intergenic 55.0%
!! GTGGGCGTTAGAGCATTGAG+AGG + chr3_2:28947408-28947427 None:intergenic 55.0%
CAATGCTCTAACGCCCACAC+CGG - chr3_2:28947410-28947429 Msa0401860:intron 55.0%
TCTAACGCCCACACCGGATA+TGG - chr3_2:28947416-28947435 Msa0401860:intron 55.0%
GTTCGGTCCATATCCGGTGT+GGG + chr3_2:28947426-28947445 None:intergenic 55.0%
AGTTCGGTCCATATCCGGTG+TGG + chr3_2:28947427-28947446 None:intergenic 55.0%
GGGCTGTTCGCCCATTAAAG+CGG + chr3_2:28947481-28947500 None:intergenic 55.0%
CTCACATCGACGGGAAGGTT+TGG + chr3_2:28947556-28947575 None:intergenic 55.0%
AAGAGCTCACATCGACGGGA+AGG + chr3_2:28947561-28947580 None:intergenic 55.0%
TTCCCGTCGATGTGAGCTCT+TGG - chr3_2:28947560-28947579 Msa0401860:CDS 55.0%
TCCCGTCGATGTGAGCTCTT+GGG - chr3_2:28947561-28947580 Msa0401860:CDS 55.0%
TCCCCAAGAGCTCACATCGA+CGG + chr3_2:28947566-28947585 None:intergenic 55.0%
!! ACCTCGATGTCGGCTCTAAC+AGG + chr3_2:28947596-28947615 None:intergenic 55.0%
CTCACATCGACGGGAAGGTT+TGG + chr3_2:28947556-28947575 None:intergenic 55.0%
AAGAGCTCACATCGACGGGA+AGG + chr3_2:28947561-28947580 None:intergenic 55.0%
TTCCCGTCGATGTGAGCTCT+TGG - chr3_2:28947560-28947579 Msa0401860:CDS 55.0%
TCCCGTCGATGTGAGCTCTT+GGG - chr3_2:28947561-28947580 Msa0401860:CDS 55.0%
TCCCCAAGAGCTCACATCGA+CGG + chr3_2:28947566-28947585 None:intergenic 55.0%
AGTCGGCCTTAGTGATCCGA+CGG + chr3_2:28947715-28947734 None:intergenic 55.0%
CCTCGAGTGCAAAGGCAGAA+GGG + chr3_2:28947776-28947795 None:intergenic 55.0%
CCTTCTGCCTTTGCACTCGA+GGG - chr3_2:28947774-28947793 Msa0401860:intron 55.0%
! AGATTGGCCCTCGAGTGCAA+AGG + chr3_2:28947784-28947803 None:intergenic 55.0%
AAAGGTTTCCTCGGGCCAGA+CGG + chr3_2:28947807-28947826 None:intergenic 55.0%
AGGCGTGCAAAGGTTTCCTC+GGG + chr3_2:28947815-28947834 None:intergenic 55.0%
GAGGCGTGCAAAGGTTTCCT+CGG + chr3_2:28947816-28947835 None:intergenic 55.0%
!! AAGGTAACGGAGGCGTGCAA+AGG + chr3_2:28947825-28947844 None:intergenic 55.0%
! TGCACGCCTCCGTTACCTTT+TGG - chr3_2:28947826-28947845 Msa0401860:intron 55.0%
! GCACGCCTCCGTTACCTTTT+GGG - chr3_2:28947827-28947846 Msa0401860:intron 55.0%
GTCTACCTGAGACTGTCCCT+TGG - chr3_2:28947872-28947891 Msa0401860:CDS 55.0%
ACAGACCAAGGGACAGTCTC+AGG + chr3_2:28947880-28947899 None:intergenic 55.0%
GACTGTCCCTTGGTCTGTAC+TGG - chr3_2:28947882-28947901 Msa0401860:CDS 55.0%
CCTTGTGCCAGTACAGACCA+AGG + chr3_2:28947892-28947911 None:intergenic 55.0%
! CCTTGGTCTGTACTGGCACA+AGG - chr3_2:28947889-28947908 Msa0401860:CDS 55.0%
AGGCAAAGAAGGCCTCCTTC+CGG + chr3_2:28947966-28947985 None:intergenic 55.0%
TCCTGTGCAGCTTAGGTGGA+AGG + chr3_2:28947986-28948005 None:intergenic 55.0%
! GGGCTTTTCCTGTGCAGCTT+AGG + chr3_2:28947993-28948012 None:intergenic 55.0%
!! CTGTTCCCTGGGATTGGCTT+TGG + chr3_2:28948014-28948033 None:intergenic 55.0%
AGATGCGAACTACCTGCACC+TGG + chr3_2:28948061-28948080 None:intergenic 55.0%
! GCACGAAAGGCGTAACGATC+TGG + chr3_2:28948128-28948147 None:intergenic 55.0%
GATCGTTACGCCTTTCGTGC+GGG - chr3_2:28948128-28948147 Msa0401860:CDS 55.0%
TAAGTTCCGACCCGCACGAA+AGG + chr3_2:28948141-28948160 None:intergenic 55.0%
TGACCTGATGACAGGGAAGC+CGG + chr3_2:28948232-28948251 None:intergenic 55.0%
CTTCCTTAACCTTCCGGCAC+TGG - chr3_2:28948256-28948275 Msa0401860:intron 55.0%
GATGGAAGGGCAGAGGCCTT+TGG + chr3_2:28946916-28946935 None:intergenic 60.0%
AGCTAGGGATGGAAGGGCAG+AGG + chr3_2:28946923-28946942 None:intergenic 60.0%
! GGGATGGGGGACAGAGGTTT+TGG - chr3_2:28946949-28946968 Msa0401860:CDS 60.0%
! CTTTTGCTCCATCCCCGCAG+GGG - chr3_2:28947177-28947196 Msa0401860:intron 60.0%
GCTGTGATACCGGAGGCTCT+GGG - chr3_2:28947222-28947241 Msa0401860:CDS 60.0%
CTGTGATACCGGAGGCTCTG+GGG - chr3_2:28947223-28947242 Msa0401860:CDS 60.0%
!! AGGCTCTGGGGAAGTCGGAA+TGG - chr3_2:28947235-28947254 Msa0401860:CDS 60.0%
!! GGCTCTGGGGAAGTCGGAAT+GGG - chr3_2:28947236-28947255 Msa0401860:CDS 60.0%
!! GGAGAGCACTCATCTTGGGG+TGG - chr3_2:28947257-28947276 Msa0401860:CDS 60.0%
GCAGTTATCCGCTCCGCACT+TGG - chr3_2:28947302-28947321 Msa0401860:CDS 60.0%
GGCTACCCAGCGTTTACCGT+TGG - chr3_2:28947323-28947342 Msa0401860:CDS 60.0%
CTAGTACGAGAGGACCGGGA+AGG + chr3_2:28947377-28947396 None:intergenic 60.0%
CTTCCCGGTCCTCTCGTACT+AGG - chr3_2:28947375-28947394 Msa0401860:intron 60.0%
CCCCAAGAGCTCACATCGAC+GGG + chr3_2:28947565-28947584 None:intergenic 60.0%
CCCGTCGATGTGAGCTCTTG+GGG - chr3_2:28947562-28947581 Msa0401860:CDS 60.0%
GCCTGTTAGAGCCGACATCG+AGG - chr3_2:28947592-28947611 Msa0401860:CDS 60.0%
CCCCAAGAGCTCACATCGAC+GGG + chr3_2:28947565-28947584 None:intergenic 60.0%
CCCGTCGATGTGAGCTCTTG+GGG - chr3_2:28947562-28947581 Msa0401860:CDS 60.0%
ATGGAAGGGCCGTCGCTCAA+CGG + chr3_2:28947686-28947705 None:intergenic 60.0%
TGAGCGACGGCCCTTCCATT+CGG - chr3_2:28947687-28947706 Msa0401860:CDS 60.0%
! TCCGACGGTGCCGAATGGAA+GGG + chr3_2:28947700-28947719 None:intergenic 60.0%
! ATCCGACGGTGCCGAATGGA+AGG + chr3_2:28947701-28947720 None:intergenic 60.0%
! AGTGATCCGACGGTGCCGAA+TGG + chr3_2:28947705-28947724 None:intergenic 60.0%
TCGGCACCGTCGGATCACTA+AGG - chr3_2:28947706-28947725 Msa0401860:CDS 60.0%
CGTCGAGCAGGGACGAAAGT+CGG + chr3_2:28947732-28947751 None:intergenic 60.0%
CGACTTTCGTCCCTGCTCGA+CGG - chr3_2:28947730-28947749 Msa0401860:CDS 60.0%
GACTTTCGTCCCTGCTCGAC+GGG - chr3_2:28947731-28947750 Msa0401860:CDS 60.0%
CCCTTCTGCCTTTGCACTCG+AGG - chr3_2:28947773-28947792 Msa0401860:intron 60.0%
CCCTCGAGTGCAAAGGCAGA+AGG + chr3_2:28947777-28947796 None:intergenic 60.0%
! CGCCTCCGTTACCTTTTGGG+AGG - chr3_2:28947830-28947849 Msa0401860:intron 60.0%
! GGCCTCCCAAAAGGTAACGG+AGG + chr3_2:28947835-28947854 None:intergenic 60.0%
AAAGAAGGCCTCCTTCCGGG+GGG + chr3_2:28947962-28947981 None:intergenic 60.0%
CAAAGAAGGCCTCCTTCCGG+GGG + chr3_2:28947963-28947982 None:intergenic 60.0%
GCAAAGAAGGCCTCCTTCCG+GGG + chr3_2:28947964-28947983 None:intergenic 60.0%
GGCAAAGAAGGCCTCCTTCC+GGG + chr3_2:28947965-28947984 None:intergenic 60.0%
GCCTTCCACCTAAGCTGCAC+AGG - chr3_2:28947982-28948001 Msa0401860:intron 60.0%
GCGTCACTGTTCCCTGGGAT+TGG + chr3_2:28948020-28948039 None:intergenic 60.0%
GGGTCTTTCTGTCCAGGTGC+AGG - chr3_2:28948046-28948065 Msa0401860:intron 60.0%
CACTGTCTCGGAGAGAGGCT+CGG + chr3_2:28948104-28948123 None:intergenic 60.0%
GTTACGCCTTTCGTGCGGGT+CGG - chr3_2:28948132-28948151 Msa0401860:CDS 60.0%
GGGTCGGAACTTACCCGACA+AGG - chr3_2:28948148-28948167 Msa0401860:intron 60.0%
TAGTTACGGCCGCCGTTCAC+CGG - chr3_2:28948195-28948214 Msa0401860:intron 60.0%
! TGCCCAGTGCCGGAAGGTTA+AGG + chr3_2:28948262-28948281 None:intergenic 60.0%
! TTAACCTTCCGGCACTGGGC+AGG - chr3_2:28948261-28948280 Msa0401860:intron 60.0%
GATGGAAGGGCAGAGGCCTT+TGG + chr3_2:28946916-28946935 None:intergenic 60.0%
AGCTAGGGATGGAAGGGCAG+AGG + chr3_2:28946923-28946942 None:intergenic 60.0%
! GGGATGGGGGACAGAGGTTT+TGG - chr3_2:28946949-28946968 Msa0401860:CDS 60.0%
! CTTTTGCTCCATCCCCGCAG+GGG - chr3_2:28947177-28947196 Msa0401860:intron 60.0%
GCTGTGATACCGGAGGCTCT+GGG - chr3_2:28947222-28947241 Msa0401860:CDS 60.0%
CTGTGATACCGGAGGCTCTG+GGG - chr3_2:28947223-28947242 Msa0401860:CDS 60.0%
!! AGGCTCTGGGGAAGTCGGAA+TGG - chr3_2:28947235-28947254 Msa0401860:CDS 60.0%
!! GGCTCTGGGGAAGTCGGAAT+GGG - chr3_2:28947236-28947255 Msa0401860:CDS 60.0%
!! GGAGAGCACTCATCTTGGGG+TGG - chr3_2:28947257-28947276 Msa0401860:CDS 60.0%
GCAGTTATCCGCTCCGCACT+TGG - chr3_2:28947302-28947321 Msa0401860:CDS 60.0%
GGCTACCCAGCGTTTACCGT+TGG - chr3_2:28947323-28947342 Msa0401860:CDS 60.0%
CTAGTACGAGAGGACCGGGA+AGG + chr3_2:28947377-28947396 None:intergenic 60.0%
CTTCCCGGTCCTCTCGTACT+AGG - chr3_2:28947375-28947394 Msa0401860:intron 60.0%
CCCCAAGAGCTCACATCGAC+GGG + chr3_2:28947565-28947584 None:intergenic 60.0%
CCCGTCGATGTGAGCTCTTG+GGG - chr3_2:28947562-28947581 Msa0401860:CDS 60.0%
GCCTGTTAGAGCCGACATCG+AGG - chr3_2:28947592-28947611 Msa0401860:CDS 60.0%
CCCCAAGAGCTCACATCGAC+GGG + chr3_2:28947565-28947584 None:intergenic 60.0%
CCCGTCGATGTGAGCTCTTG+GGG - chr3_2:28947562-28947581 Msa0401860:CDS 60.0%
ATGGAAGGGCCGTCGCTCAA+CGG + chr3_2:28947686-28947705 None:intergenic 60.0%
TGAGCGACGGCCCTTCCATT+CGG - chr3_2:28947687-28947706 Msa0401860:CDS 60.0%
! TCCGACGGTGCCGAATGGAA+GGG + chr3_2:28947700-28947719 None:intergenic 60.0%
! ATCCGACGGTGCCGAATGGA+AGG + chr3_2:28947701-28947720 None:intergenic 60.0%
! AGTGATCCGACGGTGCCGAA+TGG + chr3_2:28947705-28947724 None:intergenic 60.0%
TCGGCACCGTCGGATCACTA+AGG - chr3_2:28947706-28947725 Msa0401860:CDS 60.0%
CGTCGAGCAGGGACGAAAGT+CGG + chr3_2:28947732-28947751 None:intergenic 60.0%
CGACTTTCGTCCCTGCTCGA+CGG - chr3_2:28947730-28947749 Msa0401860:CDS 60.0%
GACTTTCGTCCCTGCTCGAC+GGG - chr3_2:28947731-28947750 Msa0401860:CDS 60.0%
CCCTTCTGCCTTTGCACTCG+AGG - chr3_2:28947773-28947792 Msa0401860:intron 60.0%
CCCTCGAGTGCAAAGGCAGA+AGG + chr3_2:28947777-28947796 None:intergenic 60.0%
! CGCCTCCGTTACCTTTTGGG+AGG - chr3_2:28947830-28947849 Msa0401860:intron 60.0%
! GGCCTCCCAAAAGGTAACGG+AGG + chr3_2:28947835-28947854 None:intergenic 60.0%
AAAGAAGGCCTCCTTCCGGG+GGG + chr3_2:28947962-28947981 None:intergenic 60.0%
CAAAGAAGGCCTCCTTCCGG+GGG + chr3_2:28947963-28947982 None:intergenic 60.0%
GCAAAGAAGGCCTCCTTCCG+GGG + chr3_2:28947964-28947983 None:intergenic 60.0%
GGCAAAGAAGGCCTCCTTCC+GGG + chr3_2:28947965-28947984 None:intergenic 60.0%
GCCTTCCACCTAAGCTGCAC+AGG - chr3_2:28947982-28948001 Msa0401860:intron 60.0%
GCGTCACTGTTCCCTGGGAT+TGG + chr3_2:28948020-28948039 None:intergenic 60.0%
GGGTCTTTCTGTCCAGGTGC+AGG - chr3_2:28948046-28948065 Msa0401860:intron 60.0%
CACTGTCTCGGAGAGAGGCT+CGG + chr3_2:28948104-28948123 None:intergenic 60.0%
GTTACGCCTTTCGTGCGGGT+CGG - chr3_2:28948132-28948151 Msa0401860:CDS 60.0%
GGGTCGGAACTTACCCGACA+AGG - chr3_2:28948148-28948167 Msa0401860:intron 60.0%
TAGTTACGGCCGCCGTTCAC+CGG - chr3_2:28948195-28948214 Msa0401860:intron 60.0%
! TGCCCAGTGCCGGAAGGTTA+AGG + chr3_2:28948262-28948281 None:intergenic 60.0%
! TTAACCTTCCGGCACTGGGC+AGG - chr3_2:28948261-28948280 Msa0401860:intron 60.0%
ATGGGTTCTCTGCCCCTGCG+GGG + chr3_2:28947192-28947211 None:intergenic 65.0%
! GATGGGTTCTCTGCCCCTGC+GGG + chr3_2:28947193-28947212 None:intergenic 65.0%
! CGATGGGTTCTCTGCCCCTG+CGG + chr3_2:28947194-28947213 None:intergenic 65.0%
GGCTGTGATACCGGAGGCTC+TGG - chr3_2:28947221-28947240 Msa0401860:CDS 65.0%
!! ACCGGAGGCTCTGGGGAAGT+CGG - chr3_2:28947230-28947249 Msa0401860:CDS 65.0%
TCCGACTTCCCCAGAGCCTC+CGG + chr3_2:28947234-28947253 None:intergenic 65.0%
CTGGGTAGCCAAGTGCGGAG+CGG + chr3_2:28947313-28947332 None:intergenic 65.0%
! CACCAGAGGTGCGTCCTTCC+CGG - chr3_2:28947360-28947379 Msa0401860:intron 65.0%
TGGGCGAACAGCCCAACCCT+TGG - chr3_2:28947487-28947506 Msa0401860:intron 65.0%
!! GATGTCGGCTCTTCGCCACC+TGG + chr3_2:28947527-28947546 None:intergenic 65.0%
GTGGCGAAGAGCCGACATCG+AGG - chr3_2:28947528-28947547 Msa0401860:CDS 65.0%
GCCCTTCCATTCGGCACCGT+CGG - chr3_2:28947696-28947715 Msa0401860:CDS 65.0%
TTTCGTCCCTGCTCGACGGG+TGG - chr3_2:28947734-28947753 Msa0401860:CDS 65.0%
TTCGTCCCTGCTCGACGGGT+GGG - chr3_2:28947735-28947754 Msa0401860:CDS 65.0%
CAAGACCCACCCGTCGAGCA+GGG + chr3_2:28947743-28947762 None:intergenic 65.0%
CTCGAGGGCCAATCTCCGTC+TGG - chr3_2:28947789-28947808 Msa0401860:intron 65.0%
TCCTCGGGCCAGACGGAGAT+TGG + chr3_2:28947800-28947819 None:intergenic 65.0%
TGGGGCGTAGGCCTCCCAAA+AGG + chr3_2:28947844-28947863 None:intergenic 65.0%
AAGAAGGCCTCCTTCCGGGG+GGG + chr3_2:28947961-28947980 None:intergenic 65.0%
! CTGGGCACTGTCTCGGAGAG+AGG + chr3_2:28948109-28948128 None:intergenic 65.0%
AGTTACGGCCGCCGTTCACC+GGG - chr3_2:28948196-28948215 Msa0401860:intron 65.0%
!! TCGCCGGCTTCCCTGTCATC+AGG - chr3_2:28948226-28948245 Msa0401860:intron 65.0%
CAGGCGTCAGCCCCCATACA+TGG - chr3_2:28948280-28948299 Msa0401860:intron 65.0%
ATGGGTTCTCTGCCCCTGCG+GGG + chr3_2:28947192-28947211 None:intergenic 65.0%
! GATGGGTTCTCTGCCCCTGC+GGG + chr3_2:28947193-28947212 None:intergenic 65.0%
! CGATGGGTTCTCTGCCCCTG+CGG + chr3_2:28947194-28947213 None:intergenic 65.0%
GGCTGTGATACCGGAGGCTC+TGG - chr3_2:28947221-28947240 Msa0401860:CDS 65.0%
!! ACCGGAGGCTCTGGGGAAGT+CGG - chr3_2:28947230-28947249 Msa0401860:CDS 65.0%
TCCGACTTCCCCAGAGCCTC+CGG + chr3_2:28947234-28947253 None:intergenic 65.0%
CTGGGTAGCCAAGTGCGGAG+CGG + chr3_2:28947313-28947332 None:intergenic 65.0%
! CACCAGAGGTGCGTCCTTCC+CGG - chr3_2:28947360-28947379 Msa0401860:intron 65.0%
TGGGCGAACAGCCCAACCCT+TGG - chr3_2:28947487-28947506 Msa0401860:intron 65.0%
!! GATGTCGGCTCTTCGCCACC+TGG + chr3_2:28947527-28947546 None:intergenic 65.0%
GTGGCGAAGAGCCGACATCG+AGG - chr3_2:28947528-28947547 Msa0401860:CDS 65.0%
GCCCTTCCATTCGGCACCGT+CGG - chr3_2:28947696-28947715 Msa0401860:CDS 65.0%
TTTCGTCCCTGCTCGACGGG+TGG - chr3_2:28947734-28947753 Msa0401860:CDS 65.0%
TTCGTCCCTGCTCGACGGGT+GGG - chr3_2:28947735-28947754 Msa0401860:CDS 65.0%
CAAGACCCACCCGTCGAGCA+GGG + chr3_2:28947743-28947762 None:intergenic 65.0%
CTCGAGGGCCAATCTCCGTC+TGG - chr3_2:28947789-28947808 Msa0401860:intron 65.0%
TCCTCGGGCCAGACGGAGAT+TGG + chr3_2:28947800-28947819 None:intergenic 65.0%
TGGGGCGTAGGCCTCCCAAA+AGG + chr3_2:28947844-28947863 None:intergenic 65.0%
AAGAAGGCCTCCTTCCGGGG+GGG + chr3_2:28947961-28947980 None:intergenic 65.0%
! CTGGGCACTGTCTCGGAGAG+AGG + chr3_2:28948109-28948128 None:intergenic 65.0%
AGTTACGGCCGCCGTTCACC+GGG - chr3_2:28948196-28948215 Msa0401860:intron 65.0%
!! TCGCCGGCTTCCCTGTCATC+AGG - chr3_2:28948226-28948245 Msa0401860:intron 65.0%
CAGGCGTCAGCCCCCATACA+TGG - chr3_2:28948280-28948299 Msa0401860:intron 65.0%
GTTCTCTGCCCCTGCGGGGA+TGG + chr3_2:28947188-28947207 None:intergenic 70.0%
GACCGGGAAGGACGCACCTC+TGG + chr3_2:28947365-28947384 None:intergenic 70.0%
GCAAGACCCACCCGTCGAGC+AGG + chr3_2:28947744-28947763 None:intergenic 70.0%
GCCAATCTCCGTCTGGCCCG+AGG - chr3_2:28947796-28947815 Msa0401860:intron 70.0%
ACTGATGGCTCGAGCCCCCC+CGG - chr3_2:28947944-28947963 Msa0401860:intron 70.0%
GTTACGGCCGCCGTTCACCG+GGG - chr3_2:28948197-28948216 Msa0401860:intron 70.0%
ACCGAAGCCCCGGTGAACGG+CGG + chr3_2:28948207-28948226 None:intergenic 70.0%
GCGACCGAAGCCCCGGTGAA+CGG + chr3_2:28948210-28948229 None:intergenic 70.0%
TTCACCGGGGCTTCGGTCGC+CGG - chr3_2:28948210-28948229 Msa0401860:intron 70.0%
GTTCTCTGCCCCTGCGGGGA+TGG + chr3_2:28947188-28947207 None:intergenic 70.0%
GACCGGGAAGGACGCACCTC+TGG + chr3_2:28947365-28947384 None:intergenic 70.0%
GCAAGACCCACCCGTCGAGC+AGG + chr3_2:28947744-28947763 None:intergenic 70.0%
GCCAATCTCCGTCTGGCCCG+AGG - chr3_2:28947796-28947815 Msa0401860:intron 70.0%
ACTGATGGCTCGAGCCCCCC+CGG - chr3_2:28947944-28947963 Msa0401860:intron 70.0%
GTTACGGCCGCCGTTCACCG+GGG - chr3_2:28948197-28948216 Msa0401860:intron 70.0%
ACCGAAGCCCCGGTGAACGG+CGG + chr3_2:28948207-28948226 None:intergenic 70.0%
GCGACCGAAGCCCCGGTGAA+CGG + chr3_2:28948210-28948229 None:intergenic 70.0%
TTCACCGGGGCTTCGGTCGC+CGG - chr3_2:28948210-28948229 Msa0401860:intron 70.0%
ATGGCTCGAGCCCCCCCGGA+AGG - chr3_2:28947948-28947967 Msa0401860:intron 75.0%
GCCGCCGTTCACCGGGGCTT+CGG - chr3_2:28948203-28948222 Msa0401860:intron 75.0%
GAAGCCGGCGACCGAAGCCC+CGG + chr3_2:28948217-28948236 None:intergenic 75.0%
! GACGCCTGCCCAGTGCCGGA+AGG + chr3_2:28948268-28948287 None:intergenic 75.0%
GGCTGACGCCTGCCCAGTGC+CGG + chr3_2:28948272-28948291 None:intergenic 75.0%
ATGGCTCGAGCCCCCCCGGA+AGG - chr3_2:28947948-28947967 Msa0401860:intron 75.0%
GCCGCCGTTCACCGGGGCTT+CGG - chr3_2:28948203-28948222 Msa0401860:intron 75.0%
GAAGCCGGCGACCGAAGCCC+CGG + chr3_2:28948217-28948236 None:intergenic 75.0%
! GACGCCTGCCCAGTGCCGGA+AGG + chr3_2:28948268-28948287 None:intergenic 75.0%
GGCTGACGCCTGCCCAGTGC+CGG + chr3_2:28948272-28948291 None:intergenic 75.0%
! GCTCGAGCCCCCCCGGAAGG+AGG - chr3_2:28947951-28947970 Msa0401860:intron 80.0%
! GCTCGAGCCCCCCCGGAAGG+AGG - chr3_2:28947951-28947970 Msa0401860:intron 80.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 28946788 28948337 28946788 ID=Msa0401860;Name=Msa0401860
chr3_2 mRNA 28946788 28948337 28946788 ID=Msa0401860-mRNA-1;Parent=Msa0401860;Name=Msa0401860-mRNA-1;_AED=0.31;_eAED=0.32;_QI=0|0|0|0.5|1|1|6|0|301
chr3_2 exon 28948281 28948337 28948281 ID=Msa0401860-mRNA-1:exon:5856;Parent=Msa0401860-mRNA-1
chr3_2 exon 28948083 28948162 28948083 ID=Msa0401860-mRNA-1:exon:5855;Parent=Msa0401860-mRNA-1
chr3_2 exon 28947850 28947928 28947850 ID=Msa0401860-mRNA-1:exon:5854;Parent=Msa0401860-mRNA-1
chr3_2 exon 28947491 28947759 28947491 ID=Msa0401860-mRNA-1:exon:5853;Parent=Msa0401860-mRNA-1
chr3_2 exon 28947215 28947359 28947215 ID=Msa0401860-mRNA-1:exon:5852;Parent=Msa0401860-mRNA-1
chr3_2 exon 28946788 28947063 28946788 ID=Msa0401860-mRNA-1:exon:5851;Parent=Msa0401860-mRNA-1
chr3_2 CDS 28948281 28948337 28948281 ID=Msa0401860-mRNA-1:cds;Parent=Msa0401860-mRNA-1
chr3_2 CDS 28948083 28948162 28948083 ID=Msa0401860-mRNA-1:cds;Parent=Msa0401860-mRNA-1
chr3_2 CDS 28947850 28947928 28947850 ID=Msa0401860-mRNA-1:cds;Parent=Msa0401860-mRNA-1
chr3_2 CDS 28947491 28947759 28947491 ID=Msa0401860-mRNA-1:cds;Parent=Msa0401860-mRNA-1
chr3_2 CDS 28947215 28947359 28947215 ID=Msa0401860-mRNA-1:cds;Parent=Msa0401860-mRNA-1
chr3_2 CDS 28946788 28947063 28946788 ID=Msa0401860-mRNA-1:cds;Parent=Msa0401860-mRNA-1
Gene Sequence

>Msa0401860

ATGGATTGGTGTGGTTCCTCTATGCCTAGGACACCAGAATATCGAACCATGAACGAAAGGTTTTGGTTTTTTCATGTTGTCAAAGAGTTGAACAATCAAAATAGATGGCGATTGCCTGATCGAATTGATCAGGTCATGGGCAGAGAACCCATCGCTGTTTTGGCTGTGATACCGGAGGCTCTGGGGAAGTCGGAATGGGAGAGCACTCATCTTGGGAGGTGCGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACGACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACATACTACAGCTCCAGGTGGCGAAGAGCCGACATCGAGGTGCCAAACCTTCCCGTCGATGTGAGCTCTTGGGGAAGATCAGCCTGTTAGAGCCGACATCGAGGTGCCAAACCTTCCCGTCGATTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCCGTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTACGCCCCATAGAAACTGTCTACCTGAGACTGTCCCTTGGTCTGTACTGGCACAAGGTGCAGGTAGTTCGCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTTCCCTGTCATCAGGTCACCAACTTCCTTAACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTTGCGGAGACCTGTGTTTTTGGTAA

Protein sequence

>Msa0401860

MDWCGSSMPRTPEYRTMNERFWFFHVVKELNNQNRWRLPDRIDQVMGREPIAVLAVIPEALGKSEWESTHLGRCVLPGPLVLGKGPLNALTPTPDMDRTVSRRSEPSSRTALMGEQPNPWNILQLQVAKSRHRGAKPSRRCELLGKISLLEPTSRCQTFPSIQAPFCLCTRGPISVWPEETFARLRYLLGGLRPIETVYLRLSLGLYWHKVQVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCHQVTNFLNLPALGRRQPPYMVLRLCGDLCFW*