Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0213280 | XP_013464384.1 | 93.838 | 357 | 22 | 0 | 1 | 357 | 1 | 357 | 0.0 | 625 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0213280 | sp|Q8LE98|ICR1_ARATH | 46.524 | 374 | 157 | 11 | 1 | 371 | 1 | 334 | 1.38e-75 | 240 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0213280 | A0A072V8T5 | 93.838 | 357 | 22 | 0 | 1 | 357 | 1 | 357 | 0.0 | 625 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003700 | Msa0213280 | 0.802305 | 5.976085e-49 | -8.615850e-47 |
| Msa0003720 | Msa0213280 | 0.800096 | 1.691954e-48 | -8.615850e-47 |
| Msa0016670 | Msa0213280 | 0.825145 | 5.497545e-54 | -8.615850e-47 |
| Msa0017510 | Msa0213280 | 0.809958 | 1.462826e-50 | -8.615850e-47 |
| Msa0027230 | Msa0213280 | 0.826953 | 2.043996e-54 | -8.615850e-47 |
| Msa0027260 | Msa0213280 | 0.806003 | 1.015523e-49 | -8.615850e-47 |
| Msa0028420 | Msa0213280 | 0.818611 | 1.790957e-52 | -8.615850e-47 |
| Msa0032090 | Msa0213280 | 0.814332 | 1.626238e-51 | -8.615850e-47 |
| Msa0032430 | Msa0213280 | 0.819369 | 1.204194e-52 | -8.615850e-47 |
| Msa0032920 | Msa0213280 | -0.845853 | 3.133133e-59 | -8.615850e-47 |
| Msa0032960 | Msa0213280 | -0.825392 | 4.806650e-54 | -8.615850e-47 |
| Msa0034270 | Msa0213280 | 0.804038 | 2.616198e-49 | -8.615850e-47 |
| Msa0036850 | Msa0213280 | 0.814050 | 1.877013e-51 | -8.615850e-47 |
| Msa0042610 | Msa0213280 | 0.827468 | 1.538398e-54 | -8.615850e-47 |
| Msa0047070 | Msa0213280 | 0.800936 | 1.140583e-48 | -8.615850e-47 |
| Msa0075220 | Msa0213280 | 0.837546 | 4.876784e-57 | -8.615850e-47 |
| Msa0079380 | Msa0213280 | 0.813740 | 2.196992e-51 | -8.615850e-47 |
| Msa0081520 | Msa0213280 | 0.852385 | 4.780665e-61 | -8.615850e-47 |
| Msa0089630 | Msa0213280 | 0.803395 | 3.558656e-49 | -8.615850e-47 |
| Msa0092790 | Msa0213280 | 0.822876 | 1.873079e-53 | -8.615850e-47 |
| Msa0094120 | Msa0213280 | 0.801922 | 7.163833e-49 | -8.615850e-47 |
| Msa0110970 | Msa0213280 | 0.823556 | 1.299990e-53 | -8.615850e-47 |
| Msa0115160 | Msa0213280 | 0.819050 | 1.423805e-52 | -8.615850e-47 |
| Msa0118570 | Msa0213280 | 0.823043 | 1.712514e-53 | -8.615850e-47 |
| Msa0122970 | Msa0213280 | 0.831251 | 1.855492e-55 | -8.615850e-47 |
| Msa0124060 | Msa0213280 | 0.821807 | 3.317567e-53 | -8.615850e-47 |
| Msa0134180 | Msa0213280 | 0.818574 | 1.825960e-52 | -8.615850e-47 |
| Msa0134610 | Msa0213280 | 0.816733 | 4.748173e-52 | -8.615850e-47 |
| Msa0136650 | Msa0213280 | 0.837394 | 5.333330e-57 | -8.615850e-47 |
| Msa0146280 | Msa0213280 | 0.808554 | 2.925341e-50 | -8.615850e-47 |
| Msa0157290 | Msa0213280 | 0.811085 | 8.351384e-51 | -8.615850e-47 |
| Msa0167520 | Msa0213280 | 0.834908 | 2.282825e-56 | -8.615850e-47 |
| Msa0168500 | Msa0213280 | 0.826900 | 2.105107e-54 | -8.615850e-47 |
| Msa0172070 | Msa0213280 | 0.815875 | 7.389888e-52 | -8.615850e-47 |
| Msa0173890 | Msa0213280 | 0.827805 | 1.277363e-54 | -8.615850e-47 |
| Msa0174450 | Msa0213280 | 0.802095 | 6.599147e-49 | -8.615850e-47 |
| Msa0180930 | Msa0213280 | 0.802748 | 4.842732e-49 | -8.615850e-47 |
| Msa0197420 | Msa0213280 | 0.812242 | 4.677743e-51 | -8.615850e-47 |
| Msa0199520 | Msa0213280 | 0.812696 | 3.722144e-51 | -8.615850e-47 |
| Msa0206840 | Msa0213280 | 0.800510 | 1.393505e-48 | -8.615850e-47 |
| Msa0213280 | Msa0222560 | 0.818478 | 1.919481e-52 | -8.615850e-47 |
| Msa0213280 | Msa0239190 | 0.811600 | 6.454671e-51 | -8.615850e-47 |
| Msa0213280 | Msa0253700 | 0.987642 | 5.332934e-171 | -8.615850e-47 |
| Msa0213280 | Msa0255090 | 0.848814 | 4.822766e-60 | -8.615850e-47 |
| Msa0213280 | Msa0259380 | 0.849091 | 4.038387e-60 | -8.615850e-47 |
| Msa0213280 | Msa0261340 | 0.822093 | 2.848882e-53 | -8.615850e-47 |
| Msa0213280 | Msa0263080 | 0.804911 | 1.720559e-49 | -8.615850e-47 |
| Msa0213280 | Msa0264870 | 0.817603 | 3.027229e-52 | -8.615850e-47 |
| Msa0213280 | Msa0267110 | 0.803461 | 3.447790e-49 | -8.615850e-47 |
| Msa0213280 | Msa0277180 | 0.810481 | 1.128392e-50 | -8.615850e-47 |
| Msa0213280 | Msa0292400 | 0.877453 | 6.209267e-69 | -8.615850e-47 |
| Msa0213280 | Msa0294160 | 0.836933 | 6.998650e-57 | -8.615850e-47 |
| Msa0213280 | Msa0300690 | 0.826827 | 2.190480e-54 | -8.615850e-47 |
| Msa0213280 | Msa0316810 | 0.809344 | 1.981687e-50 | -8.615850e-47 |
| Msa0213280 | Msa0318700 | 0.821814 | 3.304513e-53 | -8.615850e-47 |
| Msa0213280 | Msa0337700 | 0.805107 | 1.565891e-49 | -8.615850e-47 |
| Msa0213280 | Msa0338210 | 0.800062 | 1.718982e-48 | -8.615850e-47 |
| Msa0213280 | Msa0339500 | 0.833373 | 5.536218e-56 | -8.615850e-47 |
| Msa0213280 | Msa0349710 | 0.801088 | 1.061652e-48 | -8.615850e-47 |
| Msa0213280 | Msa0371030 | 0.816409 | 5.613629e-52 | -8.615850e-47 |
| Msa0213280 | Msa0378720 | 0.831334 | 1.770721e-55 | -8.615850e-47 |
| Msa0213280 | Msa0380620 | 0.822237 | 2.637650e-53 | -8.615850e-47 |
| Msa0213280 | Msa0386850 | 0.819790 | 9.651270e-53 | -8.615850e-47 |
| Msa0213280 | Msa0390970 | 0.808492 | 3.015525e-50 | -8.615850e-47 |
| Msa0213280 | Msa0422850 | 0.822031 | 2.943499e-53 | -8.615850e-47 |
| Msa0213280 | Msa0422930 | 0.825084 | 5.683001e-54 | -8.615850e-47 |
| Msa0213280 | Msa0430260 | 0.837193 | 6.006397e-57 | -8.615850e-47 |
| Msa0213280 | Msa0467490 | 0.800409 | 1.461015e-48 | -8.615850e-47 |
| Msa0213280 | Msa0474730 | 0.830246 | 3.271618e-55 | -8.615850e-47 |
| Msa0213280 | Msa0475790 | 0.831799 | 1.360216e-55 | -8.615850e-47 |
| Msa0213280 | Msa0500380 | 0.834042 | 3.768262e-56 | -8.615850e-47 |
| Msa0213280 | Msa0526420 | 0.807287 | 5.440052e-50 | -8.615850e-47 |
| Msa0213280 | Msa0527860 | 0.842315 | 2.787980e-58 | -8.615850e-47 |
| Msa0213280 | Msa0532070 | 0.841993 | 3.391865e-58 | -8.615850e-47 |
| Msa0213280 | Msa0569200 | 0.846290 | 2.382848e-59 | -8.615850e-47 |
| Msa0213280 | Msa0574890 | 0.805939 | 1.047590e-49 | -8.615850e-47 |
| Msa0213280 | Msa0580370 | 0.802404 | 5.702403e-49 | -8.615850e-47 |
| Msa0213280 | Msa0582450 | 0.837996 | 3.736651e-57 | -8.615850e-47 |
| Msa0213280 | Msa0586190 | 0.836988 | 6.776543e-57 | -8.615850e-47 |
| Msa0213280 | Msa0614000 | 0.805224 | 1.480308e-49 | -8.615850e-47 |
| Msa0213280 | Msa0620990 | 0.819598 | 1.068033e-52 | -8.615850e-47 |
| Msa0213280 | Msa0625630 | 0.812891 | 3.374608e-51 | -8.615850e-47 |
| Msa0213280 | Msa0626450 | 0.831202 | 1.908262e-55 | -8.615850e-47 |
| Msa0213280 | Msa0626490 | 0.833518 | 5.092799e-56 | -8.615850e-47 |
| Msa0213280 | Msa0637560 | 0.817845 | 2.669175e-52 | -8.615850e-47 |
| Msa0213280 | Msa0637580 | 0.811680 | 6.203652e-51 | -8.615850e-47 |
| Msa0213280 | Msa0638480 | 0.823739 | 1.177511e-53 | -8.615850e-47 |
| Msa0213280 | Msa0639430 | 0.806672 | 7.342134e-50 | -8.615850e-47 |
| Msa0213280 | Msa0643300 | 0.836881 | 7.216611e-57 | -8.615850e-47 |
| Msa0213280 | Msa0650020 | 0.814226 | 1.716373e-51 | -8.615850e-47 |
| Msa0213280 | Msa0661790 | 0.814960 | 1.180539e-51 | -8.615850e-47 |
| Msa0213280 | Msa0663300 | 0.830858 | 2.318073e-55 | -8.615850e-47 |
| Msa0213280 | Msa0664060 | 0.835394 | 1.721599e-56 | -8.615850e-47 |
| Msa0213280 | Msa0664600 | 0.830982 | 2.160481e-55 | -8.615850e-47 |
| Msa0213280 | Msa0682330 | 0.814121 | 1.810522e-51 | -8.615850e-47 |
| Msa0213280 | Msa0683570 | 0.849222 | 3.714981e-60 | -8.615850e-47 |
| Msa0213280 | Msa0691980 | 0.829670 | 4.521237e-55 | -8.615850e-47 |
| Msa0213280 | Msa0718550 | 0.817808 | 2.721124e-52 | -8.615850e-47 |
| Msa0213280 | Msa0724910 | 0.803803 | 2.928389e-49 | -8.615850e-47 |
| Msa0213280 | Msa0730430 | 0.825704 | 4.053730e-54 | -8.615850e-47 |
| Msa0213280 | Msa0738040 | 0.833177 | 6.192955e-56 | -8.615850e-47 |
| Msa0213280 | Msa0741240 | 0.814681 | 1.360990e-51 | -8.615850e-47 |
| Msa0213280 | Msa0754520 | 0.805925 | 1.055061e-49 | -8.615850e-47 |
| Msa0213280 | Msa0765240 | 0.805287 | 1.436039e-49 | -8.615850e-47 |
| Msa0213280 | Msa0768990 | 0.818519 | 1.879114e-52 | -8.615850e-47 |
| Msa0213280 | Msa0795870 | 0.805646 | 1.207216e-49 | -8.615850e-47 |
| Msa0213280 | Msa0821760 | 0.818670 | 1.736554e-52 | -8.615850e-47 |
| Msa0213280 | Msa0822890 | 0.811149 | 8.088062e-51 | -8.615850e-47 |
| Msa0213280 | Msa0833220 | 0.810175 | 1.313688e-50 | -8.615850e-47 |
| Msa0213280 | Msa0833650 | 0.802064 | 6.696937e-49 | -8.615850e-47 |
| Msa0213280 | Msa0835490 | 0.805894 | 1.070864e-49 | -8.615850e-47 |
| Msa0213280 | Msa0857950 | 0.846404 | 2.218804e-59 | -8.615850e-47 |
| Msa0213280 | Msa0861510 | 0.831290 | 1.815467e-55 | -8.615850e-47 |
| Msa0213280 | Msa0861600 | 0.837734 | 4.364571e-57 | -8.615850e-47 |
| Msa0213280 | Msa0861870 | 0.822120 | 2.806849e-53 | -8.615850e-47 |
| Msa0213280 | Msa0869780 | 0.806419 | 8.302191e-50 | -8.615850e-47 |
| Msa0213280 | Msa0880140 | 0.807777 | 4.282024e-50 | -8.615850e-47 |
| Msa0213280 | Msa0896540 | 0.813824 | 2.105160e-51 | -8.615850e-47 |
| Msa0213280 | Msa0906130 | 0.810451 | 1.145042e-50 | -8.615850e-47 |
| Msa0213280 | Msa0925180 | 0.800667 | 1.294418e-48 | -8.615850e-47 |
| Msa0213280 | Msa0930780 | 0.801026 | 1.093370e-48 | -8.615850e-47 |
| Msa0213280 | Msa0945110 | 0.829308 | 5.536724e-55 | -8.615850e-47 |
| Msa0213280 | Msa0981320 | 0.812097 | 5.033047e-51 | -8.615850e-47 |
| Msa0213280 | Msa1018690 | 0.817279 | 3.581441e-52 | -8.615850e-47 |
| Msa0213280 | Msa1019430 | 0.802297 | 5.997437e-49 | -8.615850e-47 |
| Msa0213280 | Msa1020670 | 0.814968 | 1.176010e-51 | -8.615850e-47 |
| Msa0213280 | Msa1029250 | 0.801900 | 7.239751e-49 | -8.615850e-47 |
| Msa0213280 | Msa1045140 | 0.864029 | 1.631497e-64 | -8.615850e-47 |
| Msa0213280 | Msa1048920 | 0.809095 | 2.241329e-50 | -8.615850e-47 |
| Msa0213280 | Msa1051830 | 0.804391 | 2.209362e-49 | -8.615850e-47 |
| Msa0213280 | Msa1066490 | 0.809308 | 2.017872e-50 | -8.615850e-47 |
| Msa0213280 | Msa1093840 | 0.810674 | 1.025212e-50 | -8.615850e-47 |
| Msa0213280 | Msa1097640 | 0.805082 | 1.585230e-49 | -8.615850e-47 |
| Msa0213280 | Msa1106700 | 0.805753 | 1.146226e-49 | -8.615850e-47 |
| Msa0213280 | Msa1113340 | 0.826126 | 3.219041e-54 | -8.615850e-47 |
| Msa0213280 | Msa1124110 | 0.835212 | 1.913589e-56 | -8.615850e-47 |
| Msa0213280 | Msa1132840 | 0.806133 | 9.536200e-50 | -8.615850e-47 |
| Msa0213280 | Msa1140210 | 0.820455 | 6.796738e-53 | -8.615850e-47 |
| Msa0213280 | Msa1143650 | 0.817121 | 3.885260e-52 | -8.615850e-47 |
| Msa0213280 | Msa1157870 | 0.823952 | 1.049584e-53 | -8.615850e-47 |
| Msa0213280 | Msa1168950 | 0.829058 | 6.365964e-55 | -8.615850e-47 |
| Msa0213280 | Msa1169040 | 0.817309 | 3.526400e-52 | -8.615850e-47 |
| Msa0213280 | Msa1182860 | 0.808689 | 2.738132e-50 | -8.615850e-47 |
| Msa0213280 | Msa1183120 | 0.835782 | 1.373586e-56 | -8.615850e-47 |
| Msa0213280 | Msa1196440 | 0.837914 | 3.924594e-57 | -8.615850e-47 |
| Msa0213280 | Msa1209460 | 0.840510 | 8.324185e-58 | -8.615850e-47 |
| Msa0213280 | Msa1229500 | 0.822364 | 2.465064e-53 | -8.615850e-47 |
| Msa0213280 | Msa1232710 | 0.831906 | 1.279647e-55 | -8.615850e-47 |
| Msa0213280 | Msa1252190 | 0.804630 | 1.969935e-49 | -8.615850e-47 |
| Msa0213280 | Msa1256340 | 0.803938 | 2.744873e-49 | -8.615850e-47 |
| Msa0213280 | Msa1271990 | 0.836481 | 9.124953e-57 | -8.615850e-47 |
| Msa0213280 | Msa1276660 | 0.822640 | 2.125791e-53 | -8.615850e-47 |
| Msa0213280 | Msa1292830 | 0.812060 | 5.127419e-51 | -8.615850e-47 |
| Msa0213280 | Msa1307570 | 0.811067 | 8.427998e-51 | -8.615850e-47 |
| Msa0213280 | Msa1309790 | 0.807077 | 6.028797e-50 | -8.615850e-47 |
| Msa0213280 | Msa1313300 | 0.831922 | 1.268363e-55 | -8.615850e-47 |
| Msa0213280 | Msa1356830 | 0.827079 | 1.907520e-54 | -8.615850e-47 |
| Msa0213280 | Msa1369150 | 0.835586 | 1.539577e-56 | -8.615850e-47 |
| Msa0213280 | Msa1370010 | 0.825168 | 5.430566e-54 | -8.615850e-47 |
| Msa0213280 | Msa1374060 | 0.808628 | 2.821125e-50 | -8.615850e-47 |
| Msa0213280 | Msa1374120 | 0.806217 | 9.158597e-50 | -8.615850e-47 |
| Msa0213280 | Msa1382560 | 0.802643 | 5.090562e-49 | -8.615850e-47 |
| Msa0213280 | Msa1382620 | 0.816053 | 6.741610e-52 | -8.615850e-47 |
| Msa0213280 | Msa1418090 | 0.821484 | 3.940726e-53 | -8.615850e-47 |
| Msa0213280 | Msa1432950 | 0.813673 | 2.272169e-51 | -8.615850e-47 |
| Msa0213280 | Msa1437940 | 0.849122 | 3.960861e-60 | -8.615850e-47 |
| Msa0213280 | Msa1440960 | 0.820518 | 6.576126e-53 | -8.615850e-47 |
| Msa0213280 | Msa1446810 | 0.837213 | 5.934294e-57 | -8.615850e-47 |
| Msa0213280 | Msa1451160 | 0.804580 | 2.017458e-49 | -8.615850e-47 |
| Msa0213280 | Msa1454140 | 0.806052 | 9.919436e-50 | -8.615850e-47 |
| Msa0213280 | Msa1459380 | 0.829591 | 4.726385e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0213280 | MtrunA17_Chr2g0313061 | 93.838 | 357 | 22 | 0 | 1 | 357 | 1 | 357 | 0.0 | 625 |
| Msa0213280 | MtrunA17_Chr8g0336501 | 99.187 | 123 | 1 | 0 | 245 | 367 | 1 | 123 | 1.50e-84 | 253 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0213280 | AT1G17140.1 | 46.524 | 374 | 157 | 11 | 1 | 371 | 1 | 334 | 1.41e-76 | 240 |
| Msa0213280 | AT1G17140.2 | 46.524 | 374 | 157 | 11 | 1 | 371 | 1 | 334 | 1.41e-76 | 240 |
| Msa0213280 | AT1G78430.1 | 46.133 | 375 | 134 | 11 | 2 | 368 | 4 | 318 | 3.64e-72 | 228 |
| Msa0213280 | AT3G53350.3 | 26.273 | 373 | 196 | 12 | 2 | 305 | 4 | 366 | 1.62e-12 | 68.6 |
| Msa0213280 | AT3G53350.2 | 26.273 | 373 | 196 | 12 | 2 | 305 | 4 | 366 | 1.62e-12 | 68.6 |
| Msa0213280 | AT3G53350.8 | 25.886 | 367 | 195 | 11 | 6 | 305 | 21 | 377 | 6.51e-12 | 67.0 |
| Msa0213280 | AT3G53350.7 | 26.005 | 373 | 199 | 13 | 2 | 305 | 4 | 368 | 2.01e-11 | 65.5 |
| Msa0213280 | AT3G53350.1 | 26.005 | 373 | 199 | 13 | 2 | 305 | 4 | 368 | 2.01e-11 | 65.5 |
| Msa0213280 | AT3G53350.5 | 26.005 | 373 | 199 | 13 | 2 | 305 | 4 | 368 | 2.01e-11 | 65.5 |
| Msa0213280 | AT5G60210.5 | 28.462 | 260 | 152 | 8 | 66 | 308 | 301 | 543 | 2.15e-11 | 65.9 |
| Msa0213280 | AT5G60210.3 | 28.462 | 260 | 152 | 8 | 66 | 308 | 301 | 543 | 2.15e-11 | 65.9 |
| Msa0213280 | AT5G60210.2 | 28.462 | 260 | 152 | 8 | 66 | 308 | 277 | 519 | 4.72e-11 | 64.7 |
| Msa0213280 | AT5G60210.4 | 28.462 | 260 | 152 | 8 | 66 | 308 | 277 | 519 | 4.72e-11 | 64.7 |
| Msa0213280 | AT5G60210.1 | 28.462 | 260 | 152 | 8 | 66 | 308 | 277 | 519 | 4.72e-11 | 64.7 |
| Msa0213280 | AT5G60210.6 | 28.462 | 260 | 152 | 8 | 66 | 308 | 277 | 519 | 4.72e-11 | 64.7 |
| Msa0213280 | AT2G37080.3 | 39.496 | 119 | 60 | 4 | 2 | 113 | 6 | 119 | 5.85e-11 | 64.3 |
| Msa0213280 | AT3G53350.4 | 25.886 | 367 | 197 | 11 | 6 | 305 | 21 | 379 | 6.78e-11 | 63.9 |
| Msa0213280 | AT3G53350.6 | 25.886 | 367 | 197 | 11 | 6 | 305 | 21 | 379 | 6.78e-11 | 63.9 |
Find 79 sgRNAs with CRISPR-Local
Find 336 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTGCAGCTGCGGTGCTTGC+AGG | 0.187779 | 2_1:+56061740 | Msa0213280:CDS |
| TCCATTGAACCACACCTTTC+AGG | 0.188017 | 2_1:-56061794 | None:intergenic |
| CGGAACACGCATTGCAGATT+TGG | 0.243840 | 2_1:+56061034 | Msa0213280:CDS |
| TTCTCTGGCTTTGATGTTGC+TGG | 0.259937 | 2_1:-56061380 | None:intergenic |
| CTTCATTCAGTTGATTCTTC+AGG | 0.293407 | 2_1:-56061511 | None:intergenic |
| GAAGAAATTGAGTAAAGAAT+TGG | 0.311524 | 2_1:+56061589 | Msa0213280:CDS |
| GATGATCTGGATGATGGTTT+TGG | 0.318666 | 2_1:+56061893 | Msa0213280:CDS |
| GATCGTCGGTCTCCTAGTTT+TGG | 0.320194 | 2_1:-56060966 | None:intergenic |
| TCCTGGTATGGTTGATGATC+TGG | 0.327726 | 2_1:+56061880 | Msa0213280:CDS |
| AGTTTGTTCAAGTGTTGTTT+TGG | 0.328022 | 2_1:-56059249 | None:intergenic |
| TTTAGTAGTATTTGCTTTCA+GGG | 0.345398 | 2_1:+56056750 | Msa0213280:five_prime_UTR |
| AGCGTCGTTGAAATCAAGTT+TGG | 0.357678 | 2_1:+56061442 | Msa0213280:CDS |
| GTGATAGAACAACAATTCTA+AGG | 0.370822 | 2_1:-56060517 | None:intergenic |
| TTTGGACTTCGGTCAGTAAC+CGG | 0.385141 | 2_1:-56060948 | None:intergenic |
| TCCTCCACAAAAGGCTTCTC+TGG | 0.388495 | 2_1:-56061395 | None:intergenic |
| TAACATACATACCTTGATCT+TGG | 0.405582 | 2_1:-56060565 | None:intergenic |
| ACCTGTTGATGTATTTGAAA+AGG | 0.409716 | 2_1:+56061343 | Msa0213280:CDS |
| AAGAATTGGAAGCTAGTAAA+GGG | 0.424711 | 2_1:+56061603 | Msa0213280:CDS |
| GAAATCTGTGGAAGAAGAAA+AGG | 0.430192 | 2_1:+56061652 | Msa0213280:CDS |
| TGAAGTTCCTATCGAAAAGT+TGG | 0.430569 | 2_1:+56061304 | Msa0213280:CDS |
| TCCTGAAAGGTGTGGTTCAA+TGG | 0.435919 | 2_1:+56061793 | Msa0213280:CDS |
| ACAGAAAATGAAGAGAGAAA+TGG | 0.437783 | 2_1:-56056641 | None:intergenic |
| TTGATATGAGTGCTGCTGCT+AGG | 0.438889 | 2_1:+56061768 | Msa0213280:CDS |
| GTGAATCCTCCAGGTTGGAT+TGG | 0.443758 | 2_1:+56062469 | Msa0213280:intron |
| TGGATTGGATTTGAGTTGTA+AGG | 0.447541 | 2_1:+56062484 | Msa0213280:CDS |
| CAGAAAATGAAGAGAGAAAT+GGG | 0.451733 | 2_1:-56056640 | None:intergenic |
| AGCAGCTGATGCTGCAGCTG+CGG | 0.457933 | 2_1:+56061730 | Msa0213280:CDS |
| AAAGAATTGGAAGCTAGTAA+AGG | 0.459045 | 2_1:+56061602 | Msa0213280:CDS |
| CATGGATATGTAGGTTCTCC+TGG | 0.462446 | 2_1:+56061863 | Msa0213280:CDS |
| GCAGCTGCGGTGCTTGCAGG+AGG | 0.462525 | 2_1:+56061743 | Msa0213280:CDS |
| AGTGTCAGCTCCTCCACAAA+AGG | 0.466933 | 2_1:-56061404 | None:intergenic |
| TATGCAAAATATTCTCATCA+AGG | 0.483262 | 2_1:+56056820 | Msa0213280:five_prime_UTR |
| TCAGATTGAGTAGTACCTCT+TGG | 0.487556 | 2_1:-56060990 | None:intergenic |
| AATCAGAAATGAAGAAGCTA+AGG | 0.488261 | 2_1:+56061684 | Msa0213280:CDS |
| TGATATGAGTGCTGCTGCTA+GGG | 0.490148 | 2_1:+56061769 | Msa0213280:CDS |
| GGAAGTTCAAGAAACTAGAA+AGG | 0.493026 | 2_1:-56056666 | None:intergenic |
| ACACCTGGTGGAAGGTATCA+TGG | 0.495632 | 2_1:+56061845 | Msa0213280:CDS |
| CATATCAAATGCCAAGATCA+AGG | 0.498306 | 2_1:+56060554 | Msa0213280:exon |
| ATGGATAAGCACTTTGGCGG+TGG | 0.498541 | 2_1:+56061812 | Msa0213280:CDS |
| ATGGTTGATGATCTGGATGA+TGG | 0.513817 | 2_1:+56061887 | Msa0213280:CDS |
| GGAAGGTATCATGGATATGT+AGG | 0.515502 | 2_1:+56061854 | Msa0213280:CDS |
| CATAAATGAGCACTAGCTAC+TGG | 0.518520 | 2_1:+56056563 | Msa0213280:five_prime_UTR |
| GTCGTTGAAATCAAGTTTGG+AGG | 0.523652 | 2_1:+56061445 | Msa0213280:CDS |
| ATATGTAGGTTCTCCTGGTA+TGG | 0.532614 | 2_1:+56061868 | Msa0213280:CDS |
| GCTGCTGAAACAAAAGAAGA+AGG | 0.541331 | 2_1:+56061551 | Msa0213280:CDS |
| GCAGATTTGGAATCACAGCT+TGG | 0.551467 | 2_1:+56061047 | Msa0213280:CDS |
| CAAGAGGTACTCATCAGCTT+CGG | 0.558421 | 2_1:+56060886 | Msa0213280:CDS |
| GAAGTTCAAGAAACTAGAAA+GGG | 0.558444 | 2_1:-56056665 | None:intergenic |
| TCAGGTATAATAACATCTTG+AGG | 0.560208 | 2_1:-56061254 | None:intergenic |
| TCAATGGATAAGCACTTTGG+CGG | 0.562568 | 2_1:+56061809 | Msa0213280:CDS |
| AAAAGAAGAAGGAATGACAA+TGG | 0.571449 | 2_1:+56061562 | Msa0213280:CDS |
| TCCATCACATCATCATCGAC+CGG | 0.578161 | 2_1:+56060929 | Msa0213280:CDS |
| ACAGTAAATCAGAAGAAGCT+CGG | 0.580748 | 2_1:+56061014 | Msa0213280:CDS |
| GGTTCAATGGATAAGCACTT+TGG | 0.584940 | 2_1:+56061806 | Msa0213280:CDS |
| CGAAGCTGATGAGTACCTCT+TGG | 0.586620 | 2_1:-56060885 | None:intergenic |
| CCTCTTGGTGACTGCCTCTG+AGG | 0.586987 | 2_1:-56060870 | None:intergenic |
| TCCAGATCATCAACCATACC+AGG | 0.598846 | 2_1:-56061881 | None:intergenic |
| CTGCTGCTAGGGTTCCTGAA+AGG | 0.600125 | 2_1:+56061780 | Msa0213280:CDS |
| TAGTACCTCTTGGAGATCGT+CGG | 0.608078 | 2_1:-56060980 | None:intergenic |
| CTGTGGAAGAAGAAAAGGCA+GGG | 0.608960 | 2_1:+56061657 | Msa0213280:CDS |
| ACCGGTCGATGATGATGTGA+TGG | 0.611787 | 2_1:-56060930 | None:intergenic |
| ATTAAAGCTGTTATGAACTG+TGG | 0.611804 | 2_1:-56056597 | None:intergenic |
| TTAAAGCTGTTATGAACTGT+GGG | 0.615265 | 2_1:-56056596 | None:intergenic |
| ATCAGAAATGAAGAAGCTAA+GGG | 0.620572 | 2_1:+56061685 | Msa0213280:CDS |
| CATTTGAGACACCTGGTGGA+AGG | 0.626032 | 2_1:+56061837 | Msa0213280:CDS |
| AGCTCAATCAGTAGTTCCTG+TGG | 0.631311 | 2_1:+56061160 | Msa0213280:CDS |
| TCTGTGGAAGAAGAAAAGGC+AGG | 0.632238 | 2_1:+56061656 | Msa0213280:CDS |
| GGGGAACTGATTTGCCTCAG+AGG | 0.632430 | 2_1:+56060856 | Msa0213280:intron |
| ACTGACCGAAGTCCAAAACT+AGG | 0.638929 | 2_1:+56060954 | Msa0213280:CDS |
| GCTAGGGTTCCTGAAAGGTG+TGG | 0.647120 | 2_1:+56061785 | Msa0213280:CDS |
| AAGCTGTTATGAACTGTGGG+AGG | 0.661755 | 2_1:-56056593 | None:intergenic |
| ATGATGTGATGGATCTGAGT+CGG | 0.663820 | 2_1:-56060919 | None:intergenic |
| GGTGGAACATTTGAGACACC+TGG | 0.665184 | 2_1:+56061830 | Msa0213280:CDS |
| TATCCATGATACCTTCCACC+AGG | 0.668548 | 2_1:-56061848 | None:intergenic |
| GAATGAGAAGTTGAAATCTG+TGG | 0.677488 | 2_1:+56061640 | Msa0213280:CDS |
| CCTCAGAGGCAGTCACCAAG+AGG | 0.691940 | 2_1:+56060870 | Msa0213280:CDS |
| TAAGGGTGCAGACAGAACAA+TGG | 0.700140 | 2_1:+56061702 | Msa0213280:CDS |
| GGAACATTTGAGACACCTGG+TGG | 0.711032 | 2_1:+56061833 | Msa0213280:CDS |
| GGAGACCGACGATCTCCAAG+AGG | 0.717137 | 2_1:+56060975 | Msa0213280:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTTTTATTTTTTAAA+TGG | + | chr2_1:56057162-56057181 | Msa0213280:intron | 0.0% |
| !!! | AACCTTTAAAATAAATAAAT+AGG | + | chr2_1:56057741-56057760 | Msa0213280:intron | 10.0% |
| !!! | AACCTATTTATTTATTTTAA+AGG | - | chr2_1:56057746-56057765 | None:intergenic | 10.0% |
| !!! | AAATAAATAAATAGGTTTTT+CGG | + | chr2_1:56057749-56057768 | Msa0213280:intron | 10.0% |
| !!! | AGTTTTATTTAATTTCATTT+TGG | + | chr2_1:56057848-56057867 | Msa0213280:intron | 10.0% |
| !!! | GTTTTATTTAATTTCATTTT+GGG | + | chr2_1:56057849-56057868 | Msa0213280:intron | 10.0% |
| !!! | TTTTATTTAATTTCATTTTG+GGG | + | chr2_1:56057850-56057869 | Msa0213280:intron | 10.0% |
| !! | AGATTTAATTAAATTAACAT+CGG | + | chr2_1:56058169-56058188 | Msa0213280:intron | 10.0% |
| !!! | ATAACTTATTTTTTTTTTGA+GGG | - | chr2_1:56058408-56058427 | None:intergenic | 10.0% |
| !!! | TATAACTTATTTTTTTTTTG+AGG | - | chr2_1:56058409-56058428 | None:intergenic | 10.0% |
| !! | AAAAAAAAATAAGTTATAGT+TGG | + | chr2_1:56058411-56058430 | Msa0213280:intron | 10.0% |
| !!! | CATTTAGTTTTATAATTTAT+AGG | + | chr2_1:56058814-56058833 | Msa0213280:intron | 10.0% |
| !!! | TTATTTTTTATTTTCAGTTT+CGG | - | chr2_1:56058856-56058875 | None:intergenic | 10.0% |
| !!! | AATAATTACATTTTAAAAGA+AGG | - | chr2_1:56060621-56060640 | None:intergenic | 10.0% |
| !! | ATATTGTTAGAATATTTAGA+AGG | + | chr2_1:56057377-56057396 | Msa0213280:intron | 15.0% |
| !! | TATTGTTAGAATATTTAGAA+GGG | + | chr2_1:56057378-56057397 | Msa0213280:intron | 15.0% |
| !! | AAAACAAAAAACAATCATTT+CGG | + | chr2_1:56057883-56057902 | Msa0213280:intron | 15.0% |
| !! | GATTTAATTAAATTAACATC+GGG | + | chr2_1:56058170-56058189 | Msa0213280:intron | 15.0% |
| !! | ACATTATTATATAAAGCAAA+GGG | - | chr2_1:56058549-56058568 | None:intergenic | 15.0% |
| !! | TTTGCTTTATATAATAATGT+GGG | + | chr2_1:56058549-56058568 | Msa0213280:intron | 15.0% |
| !! | AAATTATAAATGAAGAAGAT+AGG | + | chr2_1:56058692-56058711 | Msa0213280:intron | 15.0% |
| !! | AATTATAAATGAAGAAGATA+GGG | + | chr2_1:56058693-56058712 | Msa0213280:intron | 15.0% |
| !! | ATGCATATTTGTAAATTATA+GGG | - | chr2_1:56058761-56058780 | None:intergenic | 15.0% |
| !! | AAAATTTGAAAAAGTAATGT+TGG | - | chr2_1:56058947-56058966 | None:intergenic | 15.0% |
| !!! | AATAAAAGTATTGGTAAAAT+AGG | - | chr2_1:56059082-56059101 | None:intergenic | 15.0% |
| !! | TAATTTATTAATAAGTTGCA+TGG | + | chr2_1:56059101-56059120 | Msa0213280:intron | 15.0% |
| !!! | TAACATTTGATGATTTTATT+AGG | + | chr2_1:56059211-56059230 | Msa0213280:intron | 15.0% |
| !!! | CTATTTTTCTTTAAAGAAAA+TGG | - | chr2_1:56060348-56060367 | None:intergenic | 15.0% |
| !!! | TGTTTTTTATATCAAAATCA+GGG | - | chr2_1:56060727-56060746 | None:intergenic | 15.0% |
| !!! | TTGTTTTTTATATCAAAATC+AGG | - | chr2_1:56060728-56060747 | None:intergenic | 15.0% |
| !! | TGATATAAAAAACAAAATCA+TGG | + | chr2_1:56060733-56060752 | Msa0213280:intron | 15.0% |
| !!! | ATTAATTGTTGTTTTCAAAT+AGG | + | chr2_1:56060835-56060854 | Msa0213280:intron | 15.0% |
| !!! | TTAATTGTTGTTTTCAAATA+GGG | + | chr2_1:56060836-56060855 | Msa0213280:intron | 15.0% |
| !! | ATAGTTAAAAAACTACTAAT+TGG | - | chr2_1:56062118-56062137 | None:intergenic | 15.0% |
| !!! | AATTAGTAGTTTTTTAACTA+TGG | + | chr2_1:56062117-56062136 | Msa0213280:intron | 15.0% |
| !! | AATACTACTAAAAAAATGGA+GGG | - | chr2_1:56056742-56056761 | None:intergenic | 20.0% |
| !! | AAATACTACTAAAAAAATGG+AGG | - | chr2_1:56056743-56056762 | None:intergenic | 20.0% |
| !! | AGCAAATACTACTAAAAAAA+TGG | - | chr2_1:56056746-56056765 | None:intergenic | 20.0% |
| !!! | TTTTTTTTAGTGTCTTGAAT+TGG | + | chr2_1:56056958-56056977 | Msa0213280:intron | 20.0% |
| !!! | GAAGAAAGTTTTAATTTTCA+TGG | + | chr2_1:56057210-56057229 | Msa0213280:intron | 20.0% |
| !!! | ATTTTACTTTTGATTGTCAT+TGG | + | chr2_1:56057404-56057423 | Msa0213280:intron | 20.0% |
| !! | ATTTAAATGAGAATGAATGA+AGG | + | chr2_1:56057519-56057538 | Msa0213280:intron | 20.0% |
| !! | TCTAACTATACATATAAGAA+AGG | - | chr2_1:56057638-56057657 | None:intergenic | 20.0% |
| !! | AAAAAATAGAATTTGGGAAA+AGG | - | chr2_1:56057672-56057691 | None:intergenic | 20.0% |
| !! | CTATATATTAATGTACTACT+GGG | + | chr2_1:56057789-56057808 | Msa0213280:intron | 20.0% |
| !! | ATTGTATGATATCAATCAAA+CGG | - | chr2_1:56058135-56058154 | None:intergenic | 20.0% |
| !! | AATAAAAAGTTAACTCAGTT+AGG | - | chr2_1:56058268-56058287 | None:intergenic | 20.0% |
| !!! | ATATTACAATTTTTACTGCA+TGG | + | chr2_1:56058354-56058373 | Msa0213280:intron | 20.0% |
| !!! | TATTACAATTTTTACTGCAT+GGG | + | chr2_1:56058355-56058374 | Msa0213280:intron | 20.0% |
| !!! | GGTTTTAAATAAGTTATAGT+TGG | + | chr2_1:56058376-56058395 | Msa0213280:intron | 20.0% |
| !! | CACATTATTATATAAAGCAA+AGG | - | chr2_1:56058550-56058569 | None:intergenic | 20.0% |
| !! | CTTTGCTTTATATAATAATG+TGG | + | chr2_1:56058548-56058567 | Msa0213280:intron | 20.0% |
| !! | TTGCTTTATATAATAATGTG+GGG | + | chr2_1:56058550-56058569 | Msa0213280:intron | 20.0% |
| !! | CATGCATATTTGTAAATTAT+AGG | - | chr2_1:56058762-56058781 | None:intergenic | 20.0% |
| !!! | TTGTGTAATTTTAAGATTTG+TGG | - | chr2_1:56058991-56059010 | None:intergenic | 20.0% |
| !! | ATTTATATAGCTACTATTGT+AGG | + | chr2_1:56059308-56059327 | Msa0213280:intron | 20.0% |
| !! | TTTATATAGCTACTATTGTA+GGG | + | chr2_1:56059309-56059328 | Msa0213280:intron | 20.0% |
| !!! | TAAATTCCTTTTTCTTTTCT+TGG | + | chr2_1:56059665-56059684 | Msa0213280:intron | 20.0% |
| !!! | AAATTCCTTTTTCTTTTCTT+GGG | + | chr2_1:56059666-56059685 | Msa0213280:intron | 20.0% |
| !! | TTGAAATCATGTAAAATTGT+TGG | + | chr2_1:56059723-56059742 | Msa0213280:intron | 20.0% |
| !! | TGAAATCATGTAAAATTGTT+GGG | + | chr2_1:56059724-56059743 | Msa0213280:intron | 20.0% |
| !! | TGAATATCTATGTGTATTTA+TGG | - | chr2_1:56060256-56060275 | None:intergenic | 20.0% |
| !!! | TAATTGACATTAACTTGAAA+AGG | + | chr2_1:56060320-56060339 | Msa0213280:intron | 20.0% |
| !!! | AATTGACATTAACTTGAAAA+GGG | + | chr2_1:56060321-56060340 | Msa0213280:intron | 20.0% |
| !!! | TAATTGTTGTTTTCAAATAG+GGG | + | chr2_1:56060837-56060856 | Msa0213280:intron | 20.0% |
| !!! | TTGTTTCTGTTGTATTATAA+TGG | + | chr2_1:56062218-56062237 | Msa0213280:intron | 20.0% |
| !! | TTCAATATGTGTAATATTGT+GGG | + | chr2_1:56062447-56062466 | Msa0213280:intron | 20.0% |
| !!! | TTCCTTGTTTTTTGGTTTTT+GGG | + | chr2_1:56056685-56056704 | Msa0213280:five_prime_UTR | 25.0% |
| !! | AAAAAAATGGAGGGTTTTTA+AGG | - | chr2_1:56056733-56056752 | None:intergenic | 25.0% |
| !! | TTTTAGTAGTATTTGCTTTC+AGG | + | chr2_1:56056749-56056768 | Msa0213280:five_prime_UTR | 25.0% |
| ! | TTTAGTAGTATTTGCTTTCA+GGG | + | chr2_1:56056750-56056769 | Msa0213280:five_prime_UTR | 25.0% |
| ! | TATGCAAAATATTCTCATCA+AGG | + | chr2_1:56056820-56056839 | Msa0213280:five_prime_UTR | 25.0% |
| ! | AAATGCAAAGGAACAATTTA+AGG | - | chr2_1:56057084-56057103 | None:intergenic | 25.0% |
| !!! | TCTTTAGTGTATTTTAGACA+AGG | + | chr2_1:56057436-56057455 | Msa0213280:intron | 25.0% |
| ! | GCTAACTATACATATAAGAA+AGG | - | chr2_1:56057601-56057620 | None:intergenic | 25.0% |
| ! | GCTATATATTAATGTACTAC+TGG | + | chr2_1:56057788-56057807 | Msa0213280:intron | 25.0% |
| !!! | TATTTAATTTCATTTTGGGG+TGG | + | chr2_1:56057853-56057872 | Msa0213280:intron | 25.0% |
| ! | TATGCTCTTCTTAAAATTCT+CGG | - | chr2_1:56058212-56058231 | None:intergenic | 25.0% |
| ! | AAATAAGTTATAGTTGGTCA+CGG | + | chr2_1:56058382-56058401 | Msa0213280:intron | 25.0% |
| ! | TTATTATATAAAGCAAAGGG+TGG | - | chr2_1:56058546-56058565 | None:intergenic | 25.0% |
| !!! | AATGTTTTAAGTTCCTAAAG+TGG | - | chr2_1:56058798-56058817 | None:intergenic | 25.0% |
| ! | GTAGGTCAAATAATTATTGT+AGG | - | chr2_1:56059031-56059050 | None:intergenic | 25.0% |
| !! | AATTCCTTTTTCTTTTCTTG+GGG | + | chr2_1:56059667-56059686 | Msa0213280:intron | 25.0% |
| ! | ACATTATACTACCAACAATT+GGG | - | chr2_1:56059861-56059880 | None:intergenic | 25.0% |
| ! | AACATTATACTACCAACAAT+TGG | - | chr2_1:56059862-56059881 | None:intergenic | 25.0% |
| !! | TTTTATTGCATGTCATTGTT+TGG | + | chr2_1:56060016-56060035 | Msa0213280:intron | 25.0% |
| !! | TCTTTCTTGATTTTTCCAAA+AGG | + | chr2_1:56060096-56060115 | Msa0213280:intron | 25.0% |
| !! | CTTTCTTGATTTTTCCAAAA+GGG | + | chr2_1:56060097-56060116 | Msa0213280:intron | 25.0% |
| !!! | AATACCTTTCTAGTTTCTAA+TGG | + | chr2_1:56060125-56060144 | Msa0213280:intron | 25.0% |
| ! | ATGTGACTAATAAACTAGAA+AGG | - | chr2_1:56060188-56060207 | None:intergenic | 25.0% |
| ! | GTCAATTAAGCTCTTAAATT+AGG | - | chr2_1:56060308-56060327 | None:intergenic | 25.0% |
| !!! | ATTTTTTTGTTACCTTTAGC+AGG | + | chr2_1:56060464-56060483 | Msa0213280:intron | 25.0% |
| ! | TTTAAAAAAAATCACGGTCT+CGG | - | chr2_1:56060788-56060807 | None:intergenic | 25.0% |
| ! | ACGGTGTTTAAAAAAAATCA+CGG | - | chr2_1:56060794-56060813 | None:intergenic | 25.0% |
| ! | ATTAATACAGCTTAAACGTT+TGG | - | chr2_1:56060821-56060840 | None:intergenic | 25.0% |
| ! | AAGTTTGGAGGAAAAAAATA+AGG | + | chr2_1:56061457-56061476 | Msa0213280:CDS | 25.0% |
| ! | GAAGAAATTGAGTAAAGAAT+TGG | + | chr2_1:56061589-56061608 | Msa0213280:CDS | 25.0% |
| !! | TTAGAATGTTTGGTGATTTA+TGG | + | chr2_1:56061945-56061964 | Msa0213280:intron | 25.0% |
| ! | ACATAATAGTACACTCTTAA+TGG | - | chr2_1:56062244-56062263 | None:intergenic | 25.0% |
| !! | ATTTTCTATCTTCATTCCTT+TGG | + | chr2_1:56062365-56062384 | Msa0213280:intron | 25.0% |
| ! | ATAGATAGATATTACTCCAA+AGG | - | chr2_1:56062384-56062403 | None:intergenic | 25.0% |
| ! | CTTCAATATGTGTAATATTG+TGG | + | chr2_1:56062446-56062465 | Msa0213280:intron | 25.0% |
| TTAAAGCTGTTATGAACTGT+GGG | - | chr2_1:56056599-56056618 | None:intergenic | 30.0% | |
| ATTAAAGCTGTTATGAACTG+TGG | - | chr2_1:56056600-56056619 | None:intergenic | 30.0% | |
| CAGAAAATGAAGAGAGAAAT+GGG | - | chr2_1:56056643-56056662 | None:intergenic | 30.0% | |
| ACAGAAAATGAAGAGAGAAA+TGG | - | chr2_1:56056644-56056663 | None:intergenic | 30.0% | |
| GAAGTTCAAGAAACTAGAAA+GGG | - | chr2_1:56056668-56056687 | None:intergenic | 30.0% | |
| !!! | TCTTGAACTTCCTTGTTTTT+TGG | + | chr2_1:56056677-56056696 | Msa0213280:five_prime_UTR | 30.0% |
| !!! | CTTCCTTGTTTTTTGGTTTT+TGG | + | chr2_1:56056684-56056703 | Msa0213280:five_prime_UTR | 30.0% |
| TACCCAAAAACCAAAAAACA+AGG | - | chr2_1:56056690-56056709 | None:intergenic | 30.0% | |
| GATGTAGATGAACAAACATT+CGG | + | chr2_1:56057018-56057037 | Msa0213280:intron | 30.0% | |
| AGGAGATATAAGACATTGTT+TGG | - | chr2_1:56057064-56057083 | None:intergenic | 30.0% | |
| ! | TCTATTGACCATTGTCTTTT+TGG | + | chr2_1:56057117-56057136 | Msa0213280:intron | 30.0% |
| ! | CTATTGACCATTGTCTTTTT+GGG | + | chr2_1:56057118-56057137 | Msa0213280:intron | 30.0% |
| ATCAGTTACACAACTTTAAG+AGG | - | chr2_1:56057295-56057314 | None:intergenic | 30.0% | |
| !! | AGTCCTTTAGTGTATTTTAG+AGG | + | chr2_1:56057463-56057482 | Msa0213280:intron | 30.0% |
| !! | TTTTAGAGGTGGAAAAATTG+TGG | + | chr2_1:56057477-56057496 | Msa0213280:intron | 30.0% |
| TACTACTGGGTTATATTCAT+GGG | + | chr2_1:56057802-56057821 | Msa0213280:intron | 30.0% | |
| TGTTTGATATGAGCTGAATT+TGG | + | chr2_1:56057974-56057993 | Msa0213280:intron | 30.0% | |
| ATGCTCTTCTTAAAATTCTC+GGG | - | chr2_1:56058211-56058230 | None:intergenic | 30.0% | |
| AAAAGTTAACTCAGTTAGGT+TGG | - | chr2_1:56058264-56058283 | None:intergenic | 30.0% | |
| ! | CAGTTTTCATAAGTATCTTG+TGG | + | chr2_1:56058504-56058523 | Msa0213280:intron | 30.0% |
| TATTGTTTGCCTTATAATCG+CGG | + | chr2_1:56058918-56058937 | Msa0213280:intron | 30.0% | |
| AAAGTGTATCATTACAGAGT+AGG | - | chr2_1:56059049-56059068 | None:intergenic | 30.0% | |
| TTGGTAAAATAGGAGTTGAA+GGG | - | chr2_1:56059072-56059091 | None:intergenic | 30.0% | |
| ATTGGTAAAATAGGAGTTGA+AGG | - | chr2_1:56059073-56059092 | None:intergenic | 30.0% | |
| TAACACAAACAACCTTAGTA+GGG | - | chr2_1:56059153-56059172 | None:intergenic | 30.0% | |
| CTGAAAACATCAGAAGAAAA+AGG | - | chr2_1:56059184-56059203 | None:intergenic | 30.0% | |
| !!! | AGTTTGTTCAAGTGTTGTTT+TGG | - | chr2_1:56059252-56059271 | None:intergenic | 30.0% |
| !!! | TTTTTTTCTGCAATGAATGC+CGG | - | chr2_1:56059361-56059380 | None:intergenic | 30.0% |
| ATAGGGAAACATATTTACTG+CGG | - | chr2_1:56059520-56059539 | None:intergenic | 30.0% | |
| CAGTAAATATGTTTCCCTAT+TGG | + | chr2_1:56059520-56059539 | Msa0213280:intron | 30.0% | |
| ACACATGTACAATTCCAATA+GGG | - | chr2_1:56059537-56059556 | None:intergenic | 30.0% | |
| TACACATGTACAATTCCAAT+AGG | - | chr2_1:56059538-56059557 | None:intergenic | 30.0% | |
| ACTTTCCCATAAATTGCATT+AGG | - | chr2_1:56059596-56059615 | None:intergenic | 30.0% | |
| AGTTATATGCTAGCATTATC+AGG | + | chr2_1:56059619-56059638 | Msa0213280:intron | 30.0% | |
| TCTTCCATTAGAAACTAGAA+AGG | - | chr2_1:56060132-56060151 | None:intergenic | 30.0% | |
| AATTAGGTGTAACAGATAGA+AGG | - | chr2_1:56060292-56060311 | None:intergenic | 30.0% | |
| GTGATAGAACAACAATTCTA+AGG | - | chr2_1:56060520-56060539 | None:intergenic | 30.0% | |
| TAACATACATACCTTGATCT+TGG | - | chr2_1:56060568-56060587 | None:intergenic | 30.0% | |
| GTATAACATGATTAGTAGCA+AGG | - | chr2_1:56060650-56060669 | None:intergenic | 30.0% | |
| ! | TTTTGATAGACTGTGAGTTT+AGG | + | chr2_1:56060683-56060702 | Msa0213280:intron | 30.0% |
| TCAGGTATAATAACATCTTG+AGG | - | chr2_1:56061257-56061276 | None:intergenic | 30.0% | |
| ACCTGTTGATGTATTTGAAA+AGG | + | chr2_1:56061343-56061362 | Msa0213280:CDS | 30.0% | |
| ! | TCCTTTTCAAATACATCAAC+AGG | - | chr2_1:56061347-56061366 | None:intergenic | 30.0% |
| AAAAGAAGAAGGAATGACAA+TGG | + | chr2_1:56061562-56061581 | Msa0213280:CDS | 30.0% | |
| AAAGAATTGGAAGCTAGTAA+AGG | + | chr2_1:56061602-56061621 | Msa0213280:CDS | 30.0% | |
| AAGAATTGGAAGCTAGTAAA+GGG | + | chr2_1:56061603-56061622 | Msa0213280:CDS | 30.0% | |
| AATCAGAAATGAAGAAGCTA+AGG | + | chr2_1:56061684-56061703 | Msa0213280:CDS | 30.0% | |
| ATCAGAAATGAAGAAGCTAA+GGG | + | chr2_1:56061685-56061704 | Msa0213280:CDS | 30.0% | |
| !!! | TTTTGGTAGTGGAAAAAAGA+AGG | + | chr2_1:56061910-56061929 | Msa0213280:CDS | 30.0% |
| !! | TTTGGTAGTGGAAAAAAGAA+GGG | + | chr2_1:56061911-56061930 | Msa0213280:CDS | 30.0% |
| TCTTCTGGTATTAGAATGTT+TGG | + | chr2_1:56061935-56061954 | Msa0213280:intron | 30.0% | |
| AGCTGAGTTTGGAAAAATTA+CGG | + | chr2_1:56062012-56062031 | Msa0213280:intron | 30.0% | |
| TTCTGTCAAAGGTAATACTT+TGG | + | chr2_1:56062043-56062062 | Msa0213280:intron | 30.0% | |
| !! | TTTTAACTATGGCCATGTTT+AGG | + | chr2_1:56062128-56062147 | Msa0213280:intron | 30.0% |
| !! | TGATGTGAACTTTTGAAAGA+TGG | + | chr2_1:56062291-56062310 | Msa0213280:intron | 30.0% |
| GGAAGTTCAAGAAACTAGAA+AGG | - | chr2_1:56056669-56056688 | None:intergenic | 35.0% | |
| ! | ATTGTTCCTTTGCATTTTGC+AGG | + | chr2_1:56057087-56057106 | Msa0213280:intron | 35.0% |
| AATGATCCTGCAAAATGCAA+AGG | - | chr2_1:56057096-56057115 | None:intergenic | 35.0% | |
| !! | AAAAGCACCCAAAAAGACAA+TGG | - | chr2_1:56057128-56057147 | None:intergenic | 35.0% |
| !! | CCACCTCTAAAATACACTAA+AGG | - | chr2_1:56057469-56057488 | None:intergenic | 35.0% |
| !! | CCTTTAGTGTATTTTAGAGG+TGG | + | chr2_1:56057466-56057485 | Msa0213280:intron | 35.0% |
| GTACTACTGGGTTATATTCA+TGG | + | chr2_1:56057801-56057820 | Msa0213280:intron | 35.0% | |
| ACTACTGGGTTATATTCATG+GGG | + | chr2_1:56057803-56057822 | Msa0213280:intron | 35.0% | |
| AATCACAGTAGGTAAGACAA+AGG | - | chr2_1:56058072-56058091 | None:intergenic | 35.0% | |
| TTTGTCTTACCTACTGTGAT+TGG | + | chr2_1:56058071-56058090 | Msa0213280:intron | 35.0% | |
| TTTAATCCACCAATCACAGT+AGG | - | chr2_1:56058083-56058102 | None:intergenic | 35.0% | |
| ! | TTTAAGAAGAGCATACTCTC+AGG | + | chr2_1:56058217-56058236 | Msa0213280:intron | 35.0% |
| ATAATAATGTGGGGTCTTGA+TGG | + | chr2_1:56058559-56058578 | Msa0213280:intron | 35.0% | |
| TAATAATGTGGGGTCTTGAT+GGG | + | chr2_1:56058560-56058579 | Msa0213280:intron | 35.0% | |
| AGGGACAATTCAATAGAGAA+TGG | + | chr2_1:56058601-56058620 | Msa0213280:intron | 35.0% | |
| AGAAGAGAATGACAATAAGC+TGG | - | chr2_1:56058635-56058654 | None:intergenic | 35.0% | |
| AGGGACTAAGACAAAATTTG+AGG | - | chr2_1:56058742-56058761 | None:intergenic | 35.0% | |
| CATGCTTCTAATTCCACTTT+AGG | + | chr2_1:56058782-56058801 | Msa0213280:intron | 35.0% | |
| ATTGTTTGCCTTATAATCGC+GGG | + | chr2_1:56058919-56058938 | Msa0213280:intron | 35.0% | |
| TCTAGATATTTGCCCTACTA+AGG | + | chr2_1:56059138-56059157 | Msa0213280:intron | 35.0% | |
| GTAACACAAACAACCTTAGT+AGG | - | chr2_1:56059154-56059173 | None:intergenic | 35.0% | |
| !!! | TTTTTTCTGCAATGAATGCC+GGG | - | chr2_1:56059360-56059379 | None:intergenic | 35.0% |
| CATTGCAGAAAAAAACCCTT+TGG | + | chr2_1:56059366-56059385 | Msa0213280:intron | 35.0% | |
| ATTAGTCAATCAGAGCCATT+CGG | - | chr2_1:56059473-56059492 | None:intergenic | 35.0% | |
| !! | CCTTTCAAGTTGTTGCATAA+TGG | - | chr2_1:56059565-56059584 | None:intergenic | 35.0% |
| CCATTATGCAACAACTTGAA+AGG | + | chr2_1:56059562-56059581 | Msa0213280:intron | 35.0% | |
| TATGCAACAACTTGAAAGGA+TGG | + | chr2_1:56059566-56059585 | Msa0213280:intron | 35.0% | |
| AAGATTGGACGATTCATATG+GGG | - | chr2_1:56059786-56059805 | None:intergenic | 35.0% | |
| CAAGATTGGACGATTCATAT+GGG | - | chr2_1:56059787-56059806 | None:intergenic | 35.0% | |
| TCAAGATTGGACGATTCATA+TGG | - | chr2_1:56059788-56059807 | None:intergenic | 35.0% | |
| ACAACTCATATCCCAATTGT+TGG | + | chr2_1:56059847-56059866 | Msa0213280:intron | 35.0% | |
| !!! | AAAGGTATTGATGACCCTTT+TGG | - | chr2_1:56060114-56060133 | None:intergenic | 35.0% |
| TAGTCACATTTGTAGTGAGT+TGG | + | chr2_1:56060199-56060218 | Msa0213280:intron | 35.0% | |
| ! | GCTTCTTTATGATAGTGTGT+TGG | + | chr2_1:56060221-56060240 | Msa0213280:intron | 35.0% |
| ! | TTTTTGTTACCTTTAGCAGG+TGG | + | chr2_1:56060467-56060486 | Msa0213280:intron | 35.0% |
| CATATCAAATGCCAAGATCA+AGG | + | chr2_1:56060554-56060573 | Msa0213280:exon | 35.0% | |
| ! | AGCTTAAACGTTTGGAATCA+CGG | - | chr2_1:56060813-56060832 | None:intergenic | 35.0% |
| ACAGTAAATCAGAAGAAGCT+CGG | + | chr2_1:56061014-56061033 | Msa0213280:CDS | 35.0% | |
| AGCTGAAAAGAAAAAAGCTG+AGG | + | chr2_1:56061121-56061140 | Msa0213280:CDS | 35.0% | |
| ! | TCTTGAAACTTTTCTACCAC+AGG | - | chr2_1:56061179-56061198 | None:intergenic | 35.0% |
| ! | GTCTCTTCTTGATTTTCATC+AGG | - | chr2_1:56061275-56061294 | None:intergenic | 35.0% |
| TGAAGTTCCTATCGAAAAGT+TGG | + | chr2_1:56061304-56061323 | Msa0213280:CDS | 35.0% | |
| ! | TCAATTGCCAACTTTTCGAT+AGG | - | chr2_1:56061314-56061333 | None:intergenic | 35.0% |
| GGAGGAAAAAAATAAGGAAC+TGG | + | chr2_1:56061463-56061482 | Msa0213280:CDS | 35.0% | |
| GAATGAGAAGTTGAAATCTG+TGG | + | chr2_1:56061640-56061659 | Msa0213280:CDS | 35.0% | |
| GAAATCTGTGGAAGAAGAAA+AGG | + | chr2_1:56061652-56061671 | Msa0213280:CDS | 35.0% | |
| GGTGATTTATGGAAGAAGAA+AGG | + | chr2_1:56061956-56061975 | Msa0213280:intron | 35.0% | |
| ! | TTGTTGTGCATGCTTCTTTT+TGG | + | chr2_1:56062183-56062202 | Msa0213280:intron | 35.0% |
| CATAAATGAGCACTAGCTAC+TGG | + | chr2_1:56056563-56056582 | Msa0213280:five_prime_UTR | 40.0% | |
| ! | AATTTTCGTCTAGCTGCATG+CGG | - | chr2_1:56058107-56058126 | None:intergenic | 40.0% |
| !! | TTAACTCAGTTAGGTTGGTC+TGG | - | chr2_1:56058259-56058278 | None:intergenic | 40.0% |
| TAAGTATCTTGTGGCCACTA+TGG | + | chr2_1:56058513-56058532 | Msa0213280:intron | 40.0% | |
| ! | ATGGGTTTGGTTTCCCAAAA+GGG | + | chr2_1:56058578-56058597 | Msa0213280:intron | 40.0% |
| ! | TTGAATTGTCCCTCCCTTTT+GGG | - | chr2_1:56058594-56058613 | None:intergenic | 40.0% |
| ! | ATTGAATTGTCCCTCCCTTT+TGG | - | chr2_1:56058595-56058614 | None:intergenic | 40.0% |
| CTGTCTCATCTTCATCCAAA+GGG | - | chr2_1:56059384-56059403 | None:intergenic | 40.0% | |
| ACTGTCTCATCTTCATCCAA+AGG | - | chr2_1:56059385-56059404 | None:intergenic | 40.0% | |
| !! | GACTAATTGCATCGACTAGA+TGG | + | chr2_1:56059486-56059505 | Msa0213280:intron | 40.0% |
| CAACAACTTGAAAGGATGGT+GGG | + | chr2_1:56059570-56059589 | Msa0213280:intron | 40.0% | |
| GTGGGCCTAATGCAATTTAT+GGG | + | chr2_1:56059588-56059607 | Msa0213280:intron | 40.0% | |
| ! | ATCAGGTTGCACATTTGCAT+AGG | + | chr2_1:56059636-56059655 | Msa0213280:intron | 40.0% |
| ! | TCAGGTTGCACATTTGCATA+GGG | + | chr2_1:56059637-56059656 | Msa0213280:intron | 40.0% |
| AGCACCCCAAGAAAAGAAAA+AGG | - | chr2_1:56059674-56059693 | None:intergenic | 40.0% | |
| !! | TTTTCTTTTCTTGGGGTGCT+AGG | + | chr2_1:56059674-56059693 | Msa0213280:intron | 40.0% |
| ! | ATGTGTCGTTGGATCAAGAT+TGG | - | chr2_1:56059801-56059820 | None:intergenic | 40.0% |
| TTGATCCAACGACACATATG+TGG | + | chr2_1:56059804-56059823 | Msa0213280:intron | 40.0% | |
| CAACGACACATATGTGGTTA+CGG | + | chr2_1:56059810-56059829 | Msa0213280:intron | 40.0% | |
| AACGACACATATGTGGTTAC+GGG | + | chr2_1:56059811-56059830 | Msa0213280:intron | 40.0% | |
| ! | AAAAGCATGCACAATGTCAG+AGG | - | chr2_1:56059968-56059987 | None:intergenic | 40.0% |
| ! | CATGTCATTGTTTGGAACAC+AGG | + | chr2_1:56060024-56060043 | Msa0213280:intron | 40.0% |
| AACACAGGACTAATGTGATG+TGG | + | chr2_1:56060039-56060058 | Msa0213280:intron | 40.0% | |
| ACACAGGACTAATGTGATGT+GGG | + | chr2_1:56060040-56060059 | Msa0213280:intron | 40.0% | |
| !! | ATGATAGTGTGTTGGCTCTA+AGG | + | chr2_1:56060229-56060248 | Msa0213280:intron | 40.0% |
| !! | TGATAGTGTGTTGGCTCTAA+GGG | + | chr2_1:56060230-56060249 | Msa0213280:intron | 40.0% |
| !! | ATGATGTGATGGATCTGAGT+CGG | - | chr2_1:56060922-56060941 | None:intergenic | 40.0% |
| TCAGATTGAGTAGTACCTCT+TGG | - | chr2_1:56060993-56061012 | None:intergenic | 40.0% | |
| AGCGTCGTTGAAATCAAGTT+TGG | + | chr2_1:56061442-56061461 | Msa0213280:CDS | 40.0% | |
| GTCGTTGAAATCAAGTTTGG+AGG | + | chr2_1:56061445-56061464 | Msa0213280:CDS | 40.0% | |
| GCTGCTGAAACAAAAGAAGA+AGG | + | chr2_1:56061551-56061570 | Msa0213280:CDS | 40.0% | |
| GGTTCAATGGATAAGCACTT+TGG | + | chr2_1:56061806-56061825 | Msa0213280:CDS | 40.0% | |
| TCAATGGATAAGCACTTTGG+CGG | + | chr2_1:56061809-56061828 | Msa0213280:CDS | 40.0% | |
| !! | GGAAGGTATCATGGATATGT+AGG | + | chr2_1:56061854-56061873 | Msa0213280:CDS | 40.0% |
| ATATGTAGGTTCTCCTGGTA+TGG | + | chr2_1:56061868-56061887 | Msa0213280:CDS | 40.0% | |
| !! | ATGGTTGATGATCTGGATGA+TGG | + | chr2_1:56061887-56061906 | Msa0213280:CDS | 40.0% |
| !! | GATGATCTGGATGATGGTTT+TGG | + | chr2_1:56061893-56061912 | Msa0213280:CDS | 40.0% |
| GGAAAAAAGAAGGGTTCTTC+TGG | + | chr2_1:56061920-56061939 | Msa0213280:CDS | 40.0% | |
| CTTGAATTGACAGCTGAGTT+TGG | + | chr2_1:56062001-56062020 | Msa0213280:intron | 40.0% | |
| !! | ATGGTGACGTGAATTTGTTG+AGG | - | chr2_1:56062071-56062090 | None:intergenic | 40.0% |
| CAGCGAGTTCGACAAAATTA+TGG | - | chr2_1:56062090-56062109 | None:intergenic | 40.0% | |
| CTTCTGCTAACACCTAAACA+TGG | - | chr2_1:56062143-56062162 | None:intergenic | 40.0% | |
| CTTCATCTCAGTTGGAAAAG+GGG | - | chr2_1:56062332-56062351 | None:intergenic | 40.0% | |
| CCTTCATCTCAGTTGGAAAA+GGG | - | chr2_1:56062333-56062352 | None:intergenic | 40.0% | |
| ! | CCTTTTCCAACTGAGATGAA+GGG | + | chr2_1:56062331-56062350 | Msa0213280:intron | 40.0% |
| TAAGAACCCTTCATCTCAGT+TGG | - | chr2_1:56062340-56062359 | None:intergenic | 40.0% | |
| AACTCAAATCCAATCCAACC+TGG | - | chr2_1:56062481-56062500 | None:intergenic | 40.0% | |
| AAGCTGTTATGAACTGTGGG+AGG | - | chr2_1:56056596-56056615 | None:intergenic | 45.0% | |
| AGTGTCAAATTTCACGCGCA+TGG | + | chr2_1:56058007-56058026 | Msa0213280:intron | 45.0% | |
| GTCTTACCTACTGTGATTGG+TGG | + | chr2_1:56058074-56058093 | Msa0213280:intron | 45.0% | |
| TATAAAGCAAAGGGTGGCAG+TGG | - | chr2_1:56058540-56058559 | None:intergenic | 45.0% | |
| ! | GATGGGTTTGGTTTCCCAAA+AGG | + | chr2_1:56058577-56058596 | Msa0213280:intron | 45.0% |
| ! | GTTTGGTTTCCCAAAAGGGA+GGG | + | chr2_1:56058582-56058601 | Msa0213280:intron | 45.0% |
| CATCTTAGAATGCGAGCCAT+CGG | + | chr2_1:56059436-56059455 | Msa0213280:intron | 45.0% | |
| TTCGGATGAAGATCAACCGA+TGG | - | chr2_1:56059455-56059474 | None:intergenic | 45.0% | |
| TCGGTTGATCTTCATCCGAA+TGG | + | chr2_1:56059455-56059474 | Msa0213280:intron | 45.0% | |
| GCAACAACTTGAAAGGATGG+TGG | + | chr2_1:56059569-56059588 | Msa0213280:intron | 45.0% | |
| GGTGGGCCTAATGCAATTTA+TGG | + | chr2_1:56059587-56059606 | Msa0213280:intron | 45.0% | |
| CGTAACCACATATGTGTCGT+TGG | - | chr2_1:56059812-56059831 | None:intergenic | 45.0% | |
| ! | TGTGCATGCTTTTGCTCTTG+AGG | + | chr2_1:56059975-56059994 | Msa0213280:intron | 45.0% |
| ! | GTGCATGCTTTTGCTCTTGA+GGG | + | chr2_1:56059976-56059995 | Msa0213280:intron | 45.0% |
| CACAGGACTAATGTGATGTG+GGG | + | chr2_1:56060041-56060060 | Msa0213280:intron | 45.0% | |
| AATCTCACTCCACCTGCTAA+AGG | - | chr2_1:56060479-56060498 | None:intergenic | 45.0% | |
| TGTGAGTTTAGGCAGAATCG+TGG | + | chr2_1:56060694-56060713 | Msa0213280:intron | 45.0% | |
| ! | TCACGGTCTCGGATTTTGTT+AGG | - | chr2_1:56060777-56060796 | None:intergenic | 45.0% |
| !! | CAAGAGGTACTCATCAGCTT+CGG | + | chr2_1:56060886-56060905 | Msa0213280:CDS | 45.0% |
| TCCATCACATCATCATCGAC+CGG | + | chr2_1:56060929-56060948 | Msa0213280:CDS | 45.0% | |
| TTTGGACTTCGGTCAGTAAC+CGG | - | chr2_1:56060951-56060970 | None:intergenic | 45.0% | |
| ACTGACCGAAGTCCAAAACT+AGG | + | chr2_1:56060954-56060973 | Msa0213280:CDS | 45.0% | |
| !!! | GGTCTCCTAGTTTTGGACTT+CGG | - | chr2_1:56060962-56060981 | None:intergenic | 45.0% |
| TAGTACCTCTTGGAGATCGT+CGG | - | chr2_1:56060983-56061002 | None:intergenic | 45.0% | |
| ! | GCAGATTTGGAATCACAGCT+TGG | + | chr2_1:56061047-56061066 | Msa0213280:CDS | 45.0% |
| AGCTCAATCAGTAGTTCCTG+TGG | + | chr2_1:56061160-56061179 | Msa0213280:CDS | 45.0% | |
| !! | TTCTCTGGCTTTGATGTTGC+TGG | - | chr2_1:56061383-56061402 | None:intergenic | 45.0% |
| ! | AAAGCCAGAGAAGCCTTTTG+TGG | + | chr2_1:56061391-56061410 | Msa0213280:CDS | 45.0% |
| TCTGTGGAAGAAGAAAAGGC+AGG | + | chr2_1:56061656-56061675 | Msa0213280:CDS | 45.0% | |
| CTGTGGAAGAAGAAAAGGCA+GGG | + | chr2_1:56061657-56061676 | Msa0213280:CDS | 45.0% | |
| ! | TAAGGGTGCAGACAGAACAA+TGG | + | chr2_1:56061702-56061721 | Msa0213280:CDS | 45.0% |
| ! | TTGATATGAGTGCTGCTGCT+AGG | + | chr2_1:56061768-56061787 | Msa0213280:CDS | 45.0% |
| ! | TGATATGAGTGCTGCTGCTA+GGG | + | chr2_1:56061769-56061788 | Msa0213280:CDS | 45.0% |
| ! | TCCTGAAAGGTGTGGTTCAA+TGG | + | chr2_1:56061793-56061812 | Msa0213280:CDS | 45.0% |
| TCCATTGAACCACACCTTTC+AGG | - | chr2_1:56061797-56061816 | None:intergenic | 45.0% | |
| TATCCATGATACCTTCCACC+AGG | - | chr2_1:56061851-56061870 | None:intergenic | 45.0% | |
| CATGGATATGTAGGTTCTCC+TGG | + | chr2_1:56061863-56061882 | Msa0213280:CDS | 45.0% | |
| !! | TCCTGGTATGGTTGATGATC+TGG | + | chr2_1:56061880-56061899 | Msa0213280:CDS | 45.0% |
| TCCAGATCATCAACCATACC+AGG | - | chr2_1:56061884-56061903 | None:intergenic | 45.0% | |
| !!! | CTGGATGATGGTTTTGGTAG+TGG | + | chr2_1:56061899-56061918 | Msa0213280:CDS | 45.0% |
| ACTCAGCTGTCAATTCAAGC+AGG | - | chr2_1:56062000-56062019 | None:intergenic | 45.0% | |
| ! | CCCTTTTCCAACTGAGATGA+AGG | + | chr2_1:56062330-56062349 | Msa0213280:intron | 45.0% |
| CCCTTCATCTCAGTTGGAAA+AGG | - | chr2_1:56062334-56062353 | None:intergenic | 45.0% | |
| ATATTGTGGGTGAATCCTCC+AGG | + | chr2_1:56062460-56062479 | Msa0213280:intron | 45.0% | |
| TCAAATCCAATCCAACCTGG+AGG | - | chr2_1:56062478-56062497 | None:intergenic | 45.0% | |
| !! | AAATCTAAAAAAAAAATTAT+AGG | + | chr2_1:56057351-56057370 | Msa0213280:intron | 5.0% |
| !! | TTTAATAAAAAATAGAATTT+GGG | - | chr2_1:56057678-56057697 | None:intergenic | 5.0% |
| !!! | TTTTAATAAAAAATAGAATT+TGG | - | chr2_1:56057679-56057698 | None:intergenic | 5.0% |
| !!! | ATTTAGTTTTATAATTTATA+GGG | + | chr2_1:56058815-56058834 | Msa0213280:intron | 5.0% |
| !!! | TAATAAATTAATAAAAGTAT+TGG | - | chr2_1:56059091-56059110 | None:intergenic | 5.0% |
| !! | ACTCAGTTAGGTTGGTCTGG+TGG | - | chr2_1:56058256-56058275 | None:intergenic | 50.0% |
| !! | ATGTGGGGTCTTGATGGGTT+TGG | + | chr2_1:56058565-56058584 | Msa0213280:intron | 50.0% |
| ! | GGTTTGGTTTCCCAAAAGGG+AGG | + | chr2_1:56058581-56058600 | Msa0213280:intron | 50.0% |
| TGTTGGAGCCCGCGATTATA+AGG | - | chr2_1:56058930-56058949 | None:intergenic | 50.0% | |
| ! | TTGCCGCGTTTTCACAATCC+CGG | + | chr2_1:56059339-56059358 | Msa0213280:intron | 50.0% |
| ATGCCGGGATTGTGAAAACG+CGG | - | chr2_1:56059345-56059364 | None:intergenic | 50.0% | |
| ! | CATGCTTTTGCTCTTGAGGG+TGG | + | chr2_1:56059979-56059998 | Msa0213280:intron | 50.0% |
| CGAAGCTGATGAGTACCTCT+TGG | - | chr2_1:56060888-56060907 | None:intergenic | 50.0% | |
| ! | ACCGGTCGATGATGATGTGA+TGG | - | chr2_1:56060933-56060952 | None:intergenic | 50.0% |
| ! | GATCGTCGGTCTCCTAGTTT+TGG | - | chr2_1:56060969-56060988 | None:intergenic | 50.0% |
| CGGAACACGCATTGCAGATT+TGG | + | chr2_1:56061034-56061053 | Msa0213280:CDS | 50.0% | |
| TCCTCCACAAAAGGCTTCTC+TGG | - | chr2_1:56061398-56061417 | None:intergenic | 50.0% | |
| AGTGTCAGCTCCTCCACAAA+AGG | - | chr2_1:56061407-56061426 | None:intergenic | 50.0% | |
| ATGGATAAGCACTTTGGCGG+TGG | + | chr2_1:56061812-56061831 | Msa0213280:CDS | 50.0% | |
| ! | GGTGGAACATTTGAGACACC+TGG | + | chr2_1:56061830-56061849 | Msa0213280:CDS | 50.0% |
| ! | GGAACATTTGAGACACCTGG+TGG | + | chr2_1:56061833-56061852 | Msa0213280:CDS | 50.0% |
| ! | CATTTGAGACACCTGGTGGA+AGG | + | chr2_1:56061837-56061856 | Msa0213280:CDS | 50.0% |
| !! | ACACCTGGTGGAAGGTATCA+TGG | + | chr2_1:56061845-56061864 | Msa0213280:CDS | 50.0% |
| ! | GCAGGTGCGGAAATCACTTT+TGG | - | chr2_1:56061982-56062001 | None:intergenic | 50.0% |
| GCTGTCAATTCAAGCAGGTG+CGG | - | chr2_1:56061995-56062014 | None:intergenic | 50.0% | |
| CGGTCACGTGATTCTGTCAA+AGG | + | chr2_1:56062032-56062051 | Msa0213280:intron | 50.0% | |
| ! | GTGAATCCTCCAGGTTGGAT+TGG | + | chr2_1:56062469-56062488 | Msa0213280:intron | 50.0% |
| !! | GGGGAACTGATTTGCCTCAG+AGG | + | chr2_1:56060856-56060875 | Msa0213280:intron | 55.0% |
| ! | GCCAGAGAAGCCTTTTGTGG+AGG | + | chr2_1:56061394-56061413 | Msa0213280:CDS | 55.0% |
| CTGCTGCTAGGGTTCCTGAA+AGG | + | chr2_1:56061780-56061799 | Msa0213280:CDS | 55.0% | |
| GCTAGGGTTCCTGAAAGGTG+TGG | + | chr2_1:56061785-56061804 | Msa0213280:CDS | 55.0% | |
| TGTGGGTGAATCCTCCAGGT+TGG | + | chr2_1:56062464-56062483 | Msa0213280:intron | 55.0% | |
| AGGGTGGCAGTGGACCATAG+TGG | - | chr2_1:56058530-56058549 | None:intergenic | 60.0% | |
| ! | CCTCTTGGTGACTGCCTCTG+AGG | - | chr2_1:56060873-56060892 | None:intergenic | 60.0% |
| CCTCAGAGGCAGTCACCAAG+AGG | + | chr2_1:56060870-56060889 | Msa0213280:CDS | 60.0% | |
| GGAGACCGACGATCTCCAAG+AGG | + | chr2_1:56060975-56060994 | Msa0213280:CDS | 60.0% | |
| AGCAGCTGATGCTGCAGCTG+CGG | + | chr2_1:56061730-56061749 | Msa0213280:CDS | 60.0% | |
| GCTGCAGCTGCGGTGCTTGC+AGG | + | chr2_1:56061740-56061759 | Msa0213280:CDS | 70.0% | |
| GCAGCTGCGGTGCTTGCAGG+AGG | + | chr2_1:56061743-56061762 | Msa0213280:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 56056528 | 56062504 | 56056528 | ID=Msa0213280;Name=Msa0213280 |
| chr2_1 | mRNA | 56056528 | 56062504 | 56056528 | ID=Msa0213280-mRNA-1;Parent=Msa0213280;Name=Msa0213280-mRNA-1;_AED=0.16;_eAED=0.16;_QI=459|0.75|0.6|0.8|0.5|0.6|5|0|373 |
| chr2_1 | exon | 56056528 | 56056841 | 56056528 | ID=Msa0213280-mRNA-1:exon:15542;Parent=Msa0213280-mRNA-1 |
| chr2_1 | exon | 56059233 | 56059298 | 56059233 | ID=Msa0213280-mRNA-1:exon:15543;Parent=Msa0213280-mRNA-1 |
| chr2_1 | exon | 56060483 | 56060575 | 56060483 | ID=Msa0213280-mRNA-1:exon:15544;Parent=Msa0213280-mRNA-1 |
| chr2_1 | exon | 56060857 | 56061941 | 56060857 | ID=Msa0213280-mRNA-1:exon:15545;Parent=Msa0213280-mRNA-1 |
| chr2_1 | exon | 56062482 | 56062504 | 56062482 | ID=Msa0213280-mRNA-1:exon:15546;Parent=Msa0213280-mRNA-1 |
| chr2_1 | five_prime_UTR | 56056528 | 56056841 | 56056528 | ID=Msa0213280-mRNA-1:five_prime_utr;Parent=Msa0213280-mRNA-1 |
| chr2_1 | five_prime_UTR | 56059233 | 56059298 | 56059233 | ID=Msa0213280-mRNA-1:five_prime_utr;Parent=Msa0213280-mRNA-1 |
| chr2_1 | five_prime_UTR | 56060483 | 56060561 | 56060483 | ID=Msa0213280-mRNA-1:five_prime_utr;Parent=Msa0213280-mRNA-1 |
| chr2_1 | CDS | 56060562 | 56060575 | 56060562 | ID=Msa0213280-mRNA-1:cds;Parent=Msa0213280-mRNA-1 |
| chr2_1 | CDS | 56060857 | 56061941 | 56060857 | ID=Msa0213280-mRNA-1:cds;Parent=Msa0213280-mRNA-1 |
| chr2_1 | CDS | 56062482 | 56062504 | 56062482 | ID=Msa0213280-mRNA-1:cds;Parent=Msa0213280-mRNA-1 |
| Gene Sequence |
| Protein sequence |
