Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1050280 | XP_039684187.1 | 92.083 | 480 | 38 | 0 | 1 | 480 | 1 | 480 | 0.0 | 914 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1050280 | sp|Q940Z5|PMAT1_ARATH | 37.759 | 482 | 270 | 14 | 5 | 477 | 7 | 467 | 2.17e-89 | 283 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1050280 | A0A396H0H8 | 92.083 | 480 | 38 | 0 | 1 | 480 | 1 | 480 | 0.0 | 914 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007810 | Msa1050280 | 0.805981 | 1.026786e-49 | -8.615850e-47 |
| Msa0027610 | Msa1050280 | 0.800980 | 1.117008e-48 | -8.615850e-47 |
| Msa0049670 | Msa1050280 | 0.833534 | 5.046344e-56 | -8.615850e-47 |
| Msa0072590 | Msa1050280 | 0.809667 | 1.689862e-50 | -8.615850e-47 |
| Msa0079320 | Msa1050280 | 0.849196 | 3.775623e-60 | -8.615850e-47 |
| Msa0081700 | Msa1050280 | 0.801437 | 9.009028e-49 | -8.615850e-47 |
| Msa0083200 | Msa1050280 | 0.801173 | 1.020042e-48 | -8.615850e-47 |
| Msa0091300 | Msa1050280 | 0.861855 | 7.648948e-64 | -8.615850e-47 |
| Msa0117400 | Msa1050280 | 0.801349 | 9.389846e-49 | -8.615850e-47 |
| Msa0611450 | Msa1050280 | 0.804650 | 1.951488e-49 | -8.615850e-47 |
| Msa0622800 | Msa1050280 | 0.800146 | 1.652690e-48 | -8.615850e-47 |
| Msa0622930 | Msa1050280 | 0.814567 | 1.442861e-51 | -8.615850e-47 |
| Msa0625550 | Msa1050280 | 0.833501 | 5.144058e-56 | -8.615850e-47 |
| Msa0635070 | Msa1050280 | 0.801634 | 8.208363e-49 | -8.615850e-47 |
| Msa0638550 | Msa1050280 | 0.800984 | 1.115098e-48 | -8.615850e-47 |
| Msa0651720 | Msa1050280 | 0.812441 | 4.233894e-51 | -8.615850e-47 |
| Msa0654400 | Msa1050280 | 0.827148 | 1.835913e-54 | -8.615850e-47 |
| Msa0654500 | Msa1050280 | 0.814762 | 1.305844e-51 | -8.615850e-47 |
| Msa0654570 | Msa1050280 | 0.817763 | 2.785552e-52 | -8.615850e-47 |
| Msa0707870 | Msa1050280 | 0.810571 | 1.078915e-50 | -8.615850e-47 |
| Msa0708840 | Msa1050280 | 0.803464 | 3.442514e-49 | -8.615850e-47 |
| Msa0722660 | Msa1050280 | 0.819941 | 8.912706e-53 | -8.615850e-47 |
| Msa0762480 | Msa1050280 | 0.809198 | 2.130216e-50 | -8.615850e-47 |
| Msa0779830 | Msa1050280 | 0.807073 | 6.038913e-50 | -8.615850e-47 |
| Msa0829250 | Msa1050280 | 0.800836 | 1.195641e-48 | -8.615850e-47 |
| Msa0842370 | Msa1050280 | 0.815050 | 1.127740e-51 | -8.615850e-47 |
| Msa0123310 | Msa1050280 | 0.826732 | 2.308691e-54 | -8.615850e-47 |
| Msa0127220 | Msa1050280 | 0.802105 | 6.569339e-49 | -8.615850e-47 |
| Msa0138380 | Msa1050280 | 0.805445 | 1.330674e-49 | -8.615850e-47 |
| Msa0139930 | Msa1050280 | 0.836438 | 9.360203e-57 | -8.615850e-47 |
| Msa0154880 | Msa1050280 | 0.807580 | 4.715212e-50 | -8.615850e-47 |
| Msa0163540 | Msa1050280 | 0.821191 | 4.603944e-53 | -8.615850e-47 |
| Msa0170640 | Msa1050280 | 0.822624 | 2.144799e-53 | -8.615850e-47 |
| Msa0172110 | Msa1050280 | 0.850504 | 1.627475e-60 | -8.615850e-47 |
| Msa0174800 | Msa1050280 | 0.808282 | 3.344013e-50 | -8.615850e-47 |
| Msa0183960 | Msa1050280 | 0.807175 | 5.747682e-50 | -8.615850e-47 |
| Msa0198140 | Msa1050280 | 0.818135 | 2.295242e-52 | -8.615850e-47 |
| Msa0198220 | Msa1050280 | 0.821249 | 4.464406e-53 | -8.615850e-47 |
| Msa0219720 | Msa1050280 | 0.802190 | 6.311458e-49 | -8.615850e-47 |
| Msa0223500 | Msa1050280 | 0.863125 | 3.112039e-64 | -8.615850e-47 |
| Msa0228360 | Msa1050280 | 0.826102 | 3.261255e-54 | -8.615850e-47 |
| Msa0368450 | Msa1050280 | 0.829589 | 4.730752e-55 | -8.615850e-47 |
| Msa0369580 | Msa1050280 | 0.800282 | 1.550390e-48 | -8.615850e-47 |
| Msa0378440 | Msa1050280 | 0.819196 | 1.318806e-52 | -8.615850e-47 |
| Msa0384330 | Msa1050280 | 0.811947 | 5.425376e-51 | -8.615850e-47 |
| Msa0388790 | Msa1050280 | 0.824542 | 7.631108e-54 | -8.615850e-47 |
| Msa0390590 | Msa1050280 | 0.801366 | 9.314865e-49 | -8.615850e-47 |
| Msa0427890 | Msa1050280 | 0.821043 | 4.978658e-53 | -8.615850e-47 |
| Msa0460080 | Msa1050280 | 0.807419 | 5.100896e-50 | -8.615850e-47 |
| Msa0461620 | Msa1050280 | 0.808273 | 3.358514e-50 | -8.615850e-47 |
| Msa0474120 | Msa1050280 | 0.825155 | 5.468985e-54 | -8.615850e-47 |
| Msa0478660 | Msa1050280 | 0.831627 | 1.499199e-55 | -8.615850e-47 |
| Msa0478750 | Msa1050280 | 0.803016 | 4.262738e-49 | -8.615850e-47 |
| Msa1004310 | Msa1050280 | 0.823228 | 1.550805e-53 | -8.615850e-47 |
| Msa1011140 | Msa1050280 | 0.842157 | 3.070240e-58 | -8.615850e-47 |
| Msa1016580 | Msa1050280 | 0.801396 | 9.184555e-49 | -8.615850e-47 |
| Msa1029570 | Msa1050280 | 0.810667 | 1.028436e-50 | -8.615850e-47 |
| Msa1042420 | Msa1050280 | 0.809291 | 2.035065e-50 | -8.615850e-47 |
| Msa1046990 | Msa1050280 | 0.828457 | 8.894831e-55 | -8.615850e-47 |
| Msa1050280 | Msa1057940 | 0.811729 | 6.051014e-51 | -8.615850e-47 |
| Msa1050280 | Msa1078210 | 0.821474 | 3.960786e-53 | -8.615850e-47 |
| Msa1050280 | Msa1090020 | 0.801760 | 7.734116e-49 | -8.615850e-47 |
| Msa1050280 | Msa1098570 | 0.909597 | 4.778852e-82 | -8.615850e-47 |
| Msa1050280 | Msa1113780 | 0.816128 | 6.486153e-52 | -8.615850e-47 |
| Msa1050280 | Msa1123440 | 0.818714 | 1.697057e-52 | -8.615850e-47 |
| Msa1050280 | Msa1134430 | 0.811881 | 5.608170e-51 | -8.615850e-47 |
| Msa1050280 | Msa1138730 | 0.808727 | 2.686891e-50 | -8.615850e-47 |
| Msa1050280 | Msa1153260 | 0.804053 | 2.598486e-49 | -8.615850e-47 |
| Msa1050280 | Msa1156530 | 0.813296 | 2.750591e-51 | -8.615850e-47 |
| Msa1050280 | Msa1160470 | 0.804422 | 2.176680e-49 | -8.615850e-47 |
| Msa1050280 | Msa1171640 | 0.812908 | 3.345962e-51 | -8.615850e-47 |
| Msa1050280 | Msa1181370 | 0.801395 | 9.188481e-49 | -8.615850e-47 |
| Msa1050280 | Msa1203090 | 0.833758 | 4.437521e-56 | -8.615850e-47 |
| Msa1050280 | Msa1212210 | 0.807627 | 4.609004e-50 | -8.615850e-47 |
| Msa1050280 | Msa1219530 | 0.854894 | 9.083530e-62 | -8.615850e-47 |
| Msa1050280 | Msa1279250 | 0.800867 | 1.178420e-48 | -8.615850e-47 |
| Msa1050280 | Msa1292060 | 0.801301 | 9.604118e-49 | -8.615850e-47 |
| Msa1050280 | Msa1305970 | 0.822805 | 1.945882e-53 | -8.615850e-47 |
| Msa1050280 | Msa1307110 | 0.811577 | 6.530007e-51 | -8.615850e-47 |
| Msa1050280 | Msa1333220 | 0.858999 | 5.599068e-63 | -8.615850e-47 |
| Msa1050280 | Msa1342040 | 0.819588 | 1.073503e-52 | -8.615850e-47 |
| Msa1050280 | Msa1360070 | 0.802657 | 5.056154e-49 | -8.615850e-47 |
| Msa1050280 | Msa1370830 | 0.803861 | 2.848056e-49 | -8.615850e-47 |
| Msa1050280 | Msa1374210 | 0.828833 | 7.215239e-55 | -8.615850e-47 |
| Msa1050280 | Msa1381870 | 0.806556 | 7.766481e-50 | -8.615850e-47 |
| Msa1050280 | Msa1397560 | 0.823684 | 1.212869e-53 | -8.615850e-47 |
| Msa1050280 | Msa1409360 | 0.854145 | 1.495323e-61 | -8.615850e-47 |
| Msa1050280 | Msa1412800 | 0.809720 | 1.645754e-50 | -8.615850e-47 |
| Msa1050280 | Msa1421520 | 0.808153 | 3.562034e-50 | -8.615850e-47 |
| Msa1050280 | Msa1422820 | 0.800499 | 1.400604e-48 | -8.615850e-47 |
| Msa1050280 | Msa1426690 | 0.816585 | 5.126735e-52 | -8.615850e-47 |
| Msa1050280 | Msa1433060 | 0.830653 | 2.601469e-55 | -8.615850e-47 |
| Msa0240460 | Msa1050280 | 0.804939 | 1.697494e-49 | -8.615850e-47 |
| Msa0258280 | Msa1050280 | 0.819295 | 1.252175e-52 | -8.615850e-47 |
| Msa0264580 | Msa1050280 | 0.868170 | 7.968632e-66 | -8.615850e-47 |
| Msa0278340 | Msa1050280 | 0.825636 | 4.206719e-54 | -8.615850e-47 |
| Msa0295030 | Msa1050280 | 0.863919 | 1.765035e-64 | -8.615850e-47 |
| Msa0297320 | Msa1050280 | 0.813735 | 2.202428e-51 | -8.615850e-47 |
| Msa0298590 | Msa1050280 | 0.822496 | 2.296064e-53 | -8.615850e-47 |
| Msa0339970 | Msa1050280 | 0.869360 | 3.283009e-66 | -8.615850e-47 |
| Msa0362440 | Msa1050280 | 0.824128 | 9.544772e-54 | -8.615850e-47 |
| Msa0363180 | Msa1050280 | 0.807633 | 4.596249e-50 | -8.615850e-47 |
| Msa0483160 | Msa1050280 | 0.815861 | 7.443218e-52 | -8.615850e-47 |
| Msa0484040 | Msa1050280 | 0.801276 | 9.718694e-49 | -8.615850e-47 |
| Msa0502900 | Msa1050280 | 0.813985 | 1.939325e-51 | -8.615850e-47 |
| Msa0507960 | Msa1050280 | 0.812031 | 5.200983e-51 | -8.615850e-47 |
| Msa0522730 | Msa1050280 | 0.816007 | 6.902781e-52 | -8.615850e-47 |
| Msa0545750 | Msa1050280 | 0.805657 | 1.200753e-49 | -8.615850e-47 |
| Msa0556760 | Msa1050280 | 0.801216 | 9.999676e-49 | -8.615850e-47 |
| Msa0559440 | Msa1050280 | 0.827768 | 1.303348e-54 | -8.615850e-47 |
| Msa0564000 | Msa1050280 | 0.812138 | 4.928504e-51 | -8.615850e-47 |
| Msa0567420 | Msa1050280 | 0.804326 | 2.279026e-49 | -8.615850e-47 |
| Msa0569580 | Msa1050280 | 0.805500 | 1.295365e-49 | -8.615850e-47 |
| Msa0577290 | Msa1050280 | 0.813793 | 2.138567e-51 | -8.615850e-47 |
| Msa0577960 | Msa1050280 | 0.830902 | 2.260767e-55 | -8.615850e-47 |
| Msa0581090 | Msa1050280 | 0.801290 | 9.652705e-49 | -8.615850e-47 |
| Msa0869320 | Msa1050280 | 0.826082 | 3.297433e-54 | -8.615850e-47 |
| Msa0870220 | Msa1050280 | 0.807625 | 4.614187e-50 | -8.615850e-47 |
| Msa0898090 | Msa1050280 | 0.822376 | 2.448144e-53 | -8.615850e-47 |
| Msa0903460 | Msa1050280 | 0.815114 | 1.091254e-51 | -8.615850e-47 |
| Msa0924830 | Msa1050280 | 0.808936 | 2.423527e-50 | -8.615850e-47 |
| Msa0924840 | Msa1050280 | 0.802317 | 5.941431e-49 | -8.615850e-47 |
| Msa0934290 | Msa1050280 | 0.812798 | 3.537199e-51 | -8.615850e-47 |
| Msa0946570 | Msa1050280 | 0.806139 | 9.510070e-50 | -8.615850e-47 |
| Msa0956600 | Msa1050280 | 0.820990 | 5.121975e-53 | -8.615850e-47 |
| Msa0971780 | Msa1050280 | 0.812454 | 4.204668e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1050280 | MtrunA17_Chr7g0219121 | 92.083 | 480 | 38 | 0 | 1 | 480 | 1 | 480 | 0.0 | 914 |
| Msa1050280 | MtrunA17_Chr7g0219101 | 68.323 | 483 | 100 | 3 | 1 | 480 | 1 | 433 | 0.0 | 658 |
| Msa1050280 | MtrunA17_Chr7g0219291 | 60.041 | 483 | 172 | 11 | 1 | 477 | 348 | 815 | 0.0 | 554 |
| Msa1050280 | MtrunA17_Chr7g0219291 | 49.689 | 322 | 136 | 9 | 147 | 465 | 18 | 316 | 8.78e-85 | 278 |
| Msa1050280 | MtrunA17_Chr7g0219241 | 58.333 | 480 | 185 | 10 | 6 | 480 | 7 | 476 | 0.0 | 547 |
| Msa1050280 | MtrunA17_Chr7g0219181 | 59.588 | 485 | 180 | 12 | 1 | 478 | 1 | 476 | 0.0 | 526 |
| Msa1050280 | MtrunA17_Chr7g0219211 | 56.803 | 294 | 117 | 5 | 5 | 294 | 6 | 293 | 1.53e-108 | 325 |
| Msa1050280 | MtrunA17_Chr6g0455361 | 40.369 | 488 | 249 | 14 | 1 | 477 | 1 | 457 | 8.58e-102 | 312 |
| Msa1050280 | MtrunA17_Chr6g0455341 | 42.140 | 458 | 232 | 12 | 25 | 477 | 31 | 460 | 3.65e-101 | 311 |
| Msa1050280 | MtrunA17_Chr6g0454761 | 39.425 | 487 | 261 | 11 | 1 | 480 | 1 | 460 | 2.27e-100 | 322 |
| Msa1050280 | MtrunA17_Chr6g0454761 | 39.789 | 475 | 261 | 11 | 4 | 477 | 492 | 942 | 6.15e-98 | 315 |
| Msa1050280 | MtrunA17_Chr7g0219331 | 39.308 | 491 | 255 | 16 | 2 | 478 | 91 | 552 | 1.49e-99 | 309 |
| Msa1050280 | MtrunA17_Chr7g0219301 | 39.501 | 481 | 250 | 14 | 9 | 476 | 5 | 457 | 1.71e-96 | 310 |
| Msa1050280 | MtrunA17_Chr7g0219301 | 32.090 | 268 | 163 | 7 | 212 | 477 | 631 | 881 | 8.99e-35 | 138 |
| Msa1050280 | MtrunA17_Chr7g0219301 | 52.688 | 93 | 40 | 2 | 23 | 115 | 532 | 620 | 8.44e-22 | 99.0 |
| Msa1050280 | MtrunA17_Chr7g0219191 | 61.395 | 215 | 77 | 4 | 19 | 232 | 10 | 219 | 2.65e-81 | 251 |
| Msa1050280 | MtrunA17_Chr6g0455351 | 36.401 | 489 | 235 | 14 | 1 | 477 | 1 | 425 | 2.76e-81 | 258 |
| Msa1050280 | MtrunA17_Chr3g0087901 | 35.052 | 485 | 272 | 16 | 8 | 477 | 8 | 464 | 2.59e-75 | 244 |
| Msa1050280 | MtrunA17_Chr7g0219251 | 68.156 | 179 | 50 | 5 | 1 | 178 | 1 | 173 | 2.87e-73 | 229 |
| Msa1050280 | MtrunA17_Chr2g0323511 | 32.114 | 492 | 279 | 14 | 11 | 477 | 21 | 482 | 8.28e-69 | 228 |
| Msa1050280 | MtrunA17_Chr7g0219881 | 32.510 | 486 | 265 | 17 | 8 | 468 | 5 | 452 | 2.69e-60 | 204 |
| Msa1050280 | MtrunA17_Chr3g0124341 | 30.957 | 491 | 289 | 16 | 9 | 477 | 10 | 472 | 1.50e-59 | 203 |
| Msa1050280 | MtrunA17_Chr2g0323471 | 31.410 | 468 | 272 | 14 | 26 | 477 | 43 | 477 | 1.73e-59 | 202 |
| Msa1050280 | MtrunA17_Chr7g0219221 | 59.873 | 157 | 62 | 1 | 322 | 477 | 2 | 158 | 2.83e-59 | 192 |
| Msa1050280 | MtrunA17_Chr7g0219201 | 53.684 | 190 | 85 | 3 | 293 | 480 | 17 | 205 | 2.62e-58 | 191 |
| Msa1050280 | MtrunA17_Chr2g0323421 | 29.485 | 485 | 297 | 12 | 8 | 477 | 55 | 509 | 4.01e-58 | 200 |
| Msa1050280 | MtrunA17_Chr2g0323481 | 31.473 | 448 | 271 | 12 | 41 | 477 | 39 | 461 | 3.61e-56 | 193 |
| Msa1050280 | MtrunA17_Chr2g0323501 | 29.614 | 466 | 285 | 13 | 28 | 477 | 37 | 475 | 1.31e-54 | 190 |
| Msa1050280 | MtrunA17_Chr8g0339641 | 30.655 | 473 | 279 | 16 | 26 | 475 | 24 | 470 | 2.49e-53 | 186 |
| Msa1050280 | MtrunA17_Chr3g0083761 | 28.690 | 481 | 282 | 14 | 6 | 462 | 3 | 446 | 1.36e-52 | 184 |
| Msa1050280 | MtrunA17_Chr7g0219351 | 38.298 | 235 | 123 | 8 | 76 | 305 | 14 | 231 | 7.09e-41 | 146 |
| Msa1050280 | MtrunA17_Chr6g0454741 | 38.776 | 196 | 104 | 6 | 51 | 246 | 2 | 181 | 7.93e-33 | 124 |
| Msa1050280 | MtrunA17_Chr3g0092011 | 31.624 | 234 | 135 | 6 | 7 | 229 | 3 | 222 | 5.69e-27 | 109 |
| Msa1050280 | MtrunA17_Chr7g0219341 | 37.255 | 153 | 88 | 4 | 329 | 477 | 2 | 150 | 3.09e-25 | 101 |
| Msa1050280 | MtrunA17_Chr4g0001861 | 25.682 | 440 | 253 | 20 | 8 | 429 | 3 | 386 | 8.82e-22 | 97.4 |
| Msa1050280 | MtrunA17_Chr3g0113181 | 25.442 | 452 | 282 | 18 | 8 | 439 | 12 | 428 | 1.06e-21 | 97.8 |
| Msa1050280 | MtrunA17_Chr7g0219311 | 33.846 | 130 | 84 | 2 | 332 | 460 | 17 | 145 | 1.35e-20 | 88.2 |
| Msa1050280 | MtrunA17_Chr2g0323441 | 36.517 | 178 | 94 | 8 | 11 | 178 | 7 | 175 | 1.93e-20 | 88.6 |
| Msa1050280 | MtrunA17_Chr3g0134041 | 24.558 | 452 | 281 | 16 | 28 | 466 | 30 | 434 | 7.55e-20 | 92.0 |
| Msa1050280 | MtrunA17_Chr6g0467861 | 23.790 | 496 | 297 | 21 | 7 | 467 | 46 | 495 | 1.04e-19 | 92.0 |
| Msa1050280 | MtrunA17_Chr4g0053091 | 27.416 | 445 | 227 | 19 | 19 | 439 | 22 | 394 | 1.39e-19 | 90.9 |
| Msa1050280 | MtrunA17_Chr8g0371821 | 23.632 | 402 | 235 | 17 | 50 | 429 | 32 | 383 | 1.70e-19 | 90.5 |
| Msa1050280 | MtrunA17_Chr3g0087401 | 24.256 | 437 | 266 | 19 | 64 | 474 | 51 | 448 | 1.23e-17 | 85.1 |
| Msa1050280 | MtrunA17_Chr2g0334001 | 23.326 | 463 | 279 | 22 | 31 | 475 | 27 | 431 | 2.18e-17 | 84.3 |
| Msa1050280 | MtrunA17_Chr2g0311401 | 23.653 | 334 | 207 | 14 | 153 | 475 | 5 | 301 | 1.46e-15 | 77.4 |
| Msa1050280 | MtrunA17_Chr7g0253541 | 24.682 | 393 | 222 | 14 | 67 | 429 | 60 | 408 | 1.72e-15 | 78.6 |
| Msa1050280 | MtrunA17_Chr3g0134061 | 22.869 | 481 | 298 | 19 | 8 | 461 | 5 | 439 | 3.79e-15 | 77.8 |
| Msa1050280 | MtrunA17_Chr3g0087221 | 22.197 | 446 | 278 | 16 | 17 | 441 | 14 | 411 | 4.62e-15 | 77.4 |
| Msa1050280 | MtrunA17_Chr4g0053111 | 24.755 | 408 | 220 | 16 | 62 | 439 | 57 | 407 | 5.90e-15 | 77.0 |
| Msa1050280 | MtrunA17_Chr8g0386141 | 24.541 | 436 | 265 | 15 | 3 | 429 | 2 | 382 | 1.00e-14 | 76.3 |
| Msa1050280 | MtrunA17_Chr4g0054081 | 24.350 | 423 | 256 | 17 | 26 | 428 | 28 | 406 | 1.51e-14 | 75.9 |
| Msa1050280 | MtrunA17_Chr3g0132001 | 25.694 | 288 | 170 | 11 | 67 | 351 | 66 | 312 | 2.94e-14 | 74.7 |
| Msa1050280 | MtrunA17_Chr3g0134071 | 24.717 | 441 | 266 | 20 | 13 | 432 | 12 | 407 | 4.77e-14 | 74.3 |
| Msa1050280 | MtrunA17_Chr8g0361771 | 23.973 | 438 | 241 | 16 | 17 | 429 | 15 | 385 | 6.26e-14 | 73.6 |
| Msa1050280 | MtrunA17_Chr8g0361781 | 24.697 | 413 | 238 | 19 | 44 | 442 | 41 | 394 | 3.17e-13 | 71.6 |
| Msa1050280 | MtrunA17_Chr7g0253501 | 25.472 | 318 | 200 | 13 | 36 | 349 | 30 | 314 | 4.57e-13 | 71.2 |
| Msa1050280 | MtrunA17_Chr4g0072041 | 21.806 | 454 | 294 | 17 | 41 | 475 | 47 | 458 | 8.46e-13 | 70.1 |
| Msa1050280 | MtrunA17_Chr2g0283361 | 20.350 | 457 | 296 | 13 | 8 | 456 | 2 | 398 | 8.77e-13 | 70.1 |
| Msa1050280 | MtrunA17_Chr7g0253531 | 23.975 | 317 | 206 | 12 | 36 | 349 | 30 | 314 | 2.10e-11 | 65.9 |
| Msa1050280 | MtrunA17_Chr8g0376911 | 23.894 | 452 | 267 | 19 | 17 | 453 | 15 | 404 | 2.29e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1050280 | AT5G39050.1 | 37.759 | 482 | 270 | 14 | 5 | 477 | 7 | 467 | 2.20e-90 | 283 |
| Msa1050280 | AT3G29590.1 | 36.515 | 482 | 267 | 9 | 1 | 477 | 1 | 448 | 1.01e-89 | 281 |
| Msa1050280 | AT3G29635.1 | 38.074 | 457 | 253 | 12 | 24 | 477 | 25 | 454 | 4.72e-89 | 280 |
| Msa1050280 | AT5G39080.1 | 37.083 | 480 | 274 | 13 | 1 | 474 | 1 | 458 | 5.21e-87 | 275 |
| Msa1050280 | AT5G39090.1 | 36.250 | 480 | 270 | 12 | 1 | 477 | 1 | 447 | 1.11e-86 | 273 |
| Msa1050280 | AT3G29670.1 | 37.161 | 479 | 260 | 14 | 8 | 477 | 3 | 449 | 2.61e-85 | 270 |
| Msa1050280 | AT5G61160.1 | 33.404 | 473 | 283 | 13 | 8 | 475 | 3 | 448 | 8.08e-76 | 245 |
| Msa1050280 | AT3G29680.1 | 35.849 | 477 | 264 | 14 | 4 | 473 | 2 | 443 | 1.12e-74 | 242 |
| Msa1050280 | AT1G03940.1 | 29.800 | 500 | 292 | 13 | 1 | 477 | 1 | 464 | 2.67e-64 | 216 |
| Msa1050280 | AT1G03495.1 | 30.728 | 371 | 216 | 12 | 1 | 359 | 1 | 342 | 3.29e-42 | 153 |
| Msa1050280 | AT5G23940.1 | 25.546 | 458 | 265 | 21 | 8 | 439 | 3 | 410 | 2.83e-22 | 100 |
| Msa1050280 | AT2G19070.1 | 24.938 | 405 | 248 | 17 | 41 | 428 | 37 | 402 | 2.00e-19 | 90.9 |
| Msa1050280 | AT3G29720.1 | 34.247 | 219 | 103 | 10 | 99 | 303 | 10 | 201 | 5.12e-19 | 86.3 |
| Msa1050280 | AT3G50280.1 | 24.242 | 429 | 263 | 16 | 19 | 434 | 18 | 397 | 1.44e-18 | 88.6 |
| Msa1050280 | AT5G67150.1 | 24.299 | 428 | 275 | 11 | 16 | 434 | 13 | 400 | 1.73e-18 | 88.2 |
| Msa1050280 | AT3G29690.1 | 31.126 | 151 | 98 | 2 | 328 | 477 | 33 | 178 | 3.57e-16 | 77.0 |
| Msa1050280 | AT1G31490.1 | 25.747 | 435 | 256 | 20 | 25 | 449 | 26 | 403 | 9.71e-15 | 76.6 |
| Msa1050280 | AT5G07850.1 | 24.832 | 447 | 282 | 19 | 1 | 434 | 1 | 406 | 1.57e-14 | 76.3 |
| Msa1050280 | AT2G39980.1 | 23.663 | 486 | 333 | 18 | 1 | 467 | 1 | 467 | 2.25e-13 | 72.4 |
| Msa1050280 | AT4G31910.1 | 21.910 | 356 | 235 | 8 | 44 | 389 | 46 | 368 | 2.91e-12 | 68.9 |
| Msa1050280 | AT3G47170.1 | 24.294 | 354 | 223 | 13 | 45 | 388 | 51 | 369 | 5.28e-12 | 68.2 |
| Msa1050280 | AT5G41040.2 | 22.520 | 373 | 244 | 14 | 61 | 429 | 63 | 394 | 7.91e-11 | 64.3 |
| Msa1050280 | AT5G41040.1 | 22.520 | 373 | 244 | 14 | 61 | 429 | 79 | 410 | 8.85e-11 | 64.3 |
Find 73 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACATTGTTGTCTAAATATT+TGG | 0.130040 | 7_2:+14533632 | Msa1050280:CDS |
| GATTACTTCCCTACTCAAAA+AGG | 0.196644 | 7_2:-14533079 | None:intergenic |
| GTAGGGTGTGATTGTGAATT+TGG | 0.209360 | 7_2:-14532604 | None:intergenic |
| TTGAAAGGTGGTGTTGAATT+TGG | 0.214452 | 7_2:+14533807 | Msa1050280:CDS |
| GAGAGTGAAGATTTGAGTTT+TGG | 0.216722 | 7_2:-14532649 | None:intergenic |
| GATAATTGGTTTGCAGAATT+AGG | 0.230849 | 7_2:-14532508 | None:intergenic |
| ACAATTTCCGAAATAGATTT+CGG | 0.252538 | 7_2:-14533484 | None:intergenic |
| ACAAAAGTTGACAATTTCTT+TGG | 0.263553 | 7_2:-14533336 | None:intergenic |
| AACGAAACTCCGTCATCTTT+TGG | 0.264453 | 7_2:-14532754 | None:intergenic |
| GGAGTATATGAGATTGATTT+TGG | 0.273264 | 7_2:+14533708 | Msa1050280:CDS |
| AAGTGAGAGGAAGAGATAAT+TGG | 0.284573 | 7_2:-14532522 | None:intergenic |
| CGAACGGAATCCTTAACTTT+TGG | 0.284718 | 7_2:-14533213 | None:intergenic |
| TTCTTCAATATTGTTCCATT+TGG | 0.285958 | 7_2:-14533292 | None:intergenic |
| CAATTTCCGAAATAGATTTC+GGG | 0.286056 | 7_2:-14533483 | None:intergenic |
| CCGAAATAGATTTCGGGAAT+TGG | 0.301386 | 7_2:-14533477 | None:intergenic |
| TCTTCCTTGGTAAAGTCTTC+TGG | 0.306022 | 7_2:-14533534 | None:intergenic |
| TTGAACTGGATGATTGGTTT+TGG | 0.318638 | 7_2:-14532730 | None:intergenic |
| TGAAAGGTGGTGTTGAATTT+GGG | 0.328871 | 7_2:+14533808 | Msa1050280:CDS |
| CTATAGCCGGTAACATTGTT+TGG | 0.330391 | 7_2:+14532695 | Msa1050280:CDS |
| TGAGCTCACACGTGAAGATT+TGG | 0.334070 | 7_2:+14533245 | Msa1050280:CDS |
| CCAATTCCCGAAATCTATTT+CGG | 0.335034 | 7_2:+14533477 | Msa1050280:CDS |
| TCACTTTCTTAGACTTGAAT+TGG | 0.344769 | 7_2:+14532539 | Msa1050280:CDS |
| GTTGATAGAGGAATAACAAT+TGG | 0.386783 | 7_2:+14533765 | Msa1050280:CDS |
| TCTAAATATTTGGCTATGAT+TGG | 0.398839 | 7_2:+14533642 | Msa1050280:CDS |
| ATCTCACTCTCAAAACCATT+TGG | 0.401328 | 7_2:-14533108 | None:intergenic |
| TAGAAGAAAATACGTTCAAC+TGG | 0.403167 | 7_2:-14532574 | None:intergenic |
| ACACATCATGCTGTTCTTGA+TGG | 0.407163 | 7_2:+14532961 | Msa1050280:CDS |
| ATTCAAGGAATAGGAGTTGC+AGG | 0.408252 | 7_2:+14533672 | Msa1050280:CDS |
| CAAACAATGTTACCGGCTAT+AGG | 0.417276 | 7_2:-14532694 | None:intergenic |
| AAACAATGTTACCGGCTATA+GGG | 0.421018 | 7_2:-14532693 | None:intergenic |
| TTTGGATTGAACTGGATGAT+TGG | 0.424802 | 7_2:-14532736 | None:intergenic |
| GGTGAAGGAATTCAAGGAAT+AGG | 0.425888 | 7_2:+14533663 | Msa1050280:CDS |
| AGAAGGCCAAACAATGTTAC+CGG | 0.429788 | 7_2:-14532701 | None:intergenic |
| ACAAAAGTGTGTTGTCCAAA+TGG | 0.432381 | 7_2:+14533277 | Msa1050280:CDS |
| TAGGGTGTGATTGTGAATTT+GGG | 0.451765 | 7_2:-14532603 | None:intergenic |
| TTTGAGTAGGGAAGTAATCA+AGG | 0.453618 | 7_2:+14533083 | Msa1050280:CDS |
| GTTGCAGGGTCAACAAGGTT+TGG | 0.454958 | 7_2:+14533687 | Msa1050280:CDS |
| AGAGTGAGATCATAAATAGT+TGG | 0.463701 | 7_2:+14533121 | Msa1050280:CDS |
| CGGCTATAGGGAGAAAGTAT+TGG | 0.472914 | 7_2:-14532681 | None:intergenic |
| AATCACCACTCCATCTTCCT+TGG | 0.480258 | 7_2:-14533547 | None:intergenic |
| GTGTGATTGTGAATTTGGGA+GGG | 0.498440 | 7_2:-14532599 | None:intergenic |
| ATGATTGGTGAAGGAATTCA+AGG | 0.503765 | 7_2:+14533657 | Msa1050280:CDS |
| GTTCTTGATAAGCACGTGAT+GGG | 0.509399 | 7_2:+14533834 | Msa1050280:CDS |
| TGTTCTTGATAAGCACGTGA+TGG | 0.510983 | 7_2:+14533833 | Msa1050280:CDS |
| GTGATTGTGAATTTGGGAGG+GGG | 0.512685 | 7_2:-14532597 | None:intergenic |
| GAAAGTAGAGATTTGAAAGG+TGG | 0.519737 | 7_2:+14533795 | Msa1050280:CDS |
| AAATGGAACAATATTGAAGA+AGG | 0.523989 | 7_2:+14533294 | Msa1050280:CDS |
| TTATGGAAGGCCTGCAAAAG+TGG | 0.524298 | 7_2:+14533731 | Msa1050280:CDS |
| TGTGATTGTGAATTTGGGAG+GGG | 0.526202 | 7_2:-14532598 | None:intergenic |
| GAAGTAATCAAGGATCCAAA+TGG | 0.526584 | 7_2:+14533093 | Msa1050280:CDS |
| AAATAGATTTCGGGAATTGG+TGG | 0.534901 | 7_2:-14533474 | None:intergenic |
| GAAGACTTTACCAAGGAAGA+TGG | 0.540696 | 7_2:+14533537 | Msa1050280:CDS |
| GAGACAACTTCAGTTGATAG+AGG | 0.566864 | 7_2:+14533753 | Msa1050280:CDS |
| AGTTTCCTTTGATAAAATTG+TGG | 0.567981 | 7_2:+14532804 | Msa1050280:CDS |
| CAATACTTTCTCCCTATAGC+CGG | 0.569370 | 7_2:+14532682 | Msa1050280:CDS |
| ACAGAAAGTAGAGATTTGAA+AGG | 0.576880 | 7_2:+14533792 | Msa1050280:CDS |
| TATTTGGCTATGATTGGTGA+AGG | 0.577286 | 7_2:+14533648 | Msa1050280:CDS |
| GAGCTCAAATGCGACTCGAA+CGG | 0.577817 | 7_2:-14533229 | None:intergenic |
| CTATAGGGAGAAAGTATTGG+AGG | 0.584990 | 7_2:-14532678 | None:intergenic |
| GGTGTGATTGTGAATTTGGG+AGG | 0.587405 | 7_2:-14532600 | None:intergenic |
| TTCAAGTCTAAGAAAGTGAG+AGG | 0.591765 | 7_2:-14532535 | None:intergenic |
| GAATCAGTTGATTCTAAGTG+AGG | 0.601514 | 7_2:-14532871 | None:intergenic |
| TAGGAGTTGCAGGGTCAACA+AGG | 0.619039 | 7_2:+14533682 | Msa1050280:CDS |
| CGAGATAAAGAAGCTTCTTG+TGG | 0.621141 | 7_2:-14532838 | None:intergenic |
| CAGTTCAATCCAAAAGATGA+CGG | 0.625889 | 7_2:+14532745 | Msa1050280:CDS |
| CAACCATGTTCATCAAAGCA+TGG | 0.631200 | 7_2:+14532992 | Msa1050280:CDS |
| CTTTACCAAGGAAGATGGAG+TGG | 0.638020 | 7_2:+14533542 | Msa1050280:CDS |
| TATAGGGAGAAAGTATTGGA+GGG | 0.638240 | 7_2:-14532677 | None:intergenic |
| ATGATGTGTGCTTATTCCAA+TGG | 0.647501 | 7_2:-14532947 | None:intergenic |
| AGACCATGCTTTGATGAACA+TGG | 0.653845 | 7_2:-14532995 | None:intergenic |
| TTCAAGGAATAGGAGTTGCA+GGG | 0.658447 | 7_2:+14533673 | Msa1050280:CDS |
| AGAAGAAAATACGTTCAACT+GGG | 0.676059 | 7_2:-14532573 | None:intergenic |
| TGAGCCAGAAGACTTTACCA+AGG | 0.738299 | 7_2:+14533530 | Msa1050280:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAAAAACAAAAATTTTGTTT+TGG | + | chr7_2:14533420-14533439 | Msa1050280:CDS | 15.0% |
| !! | TTATAGCAAAATTAGAAAAA+TGG | + | chr7_2:14533584-14533603 | Msa1050280:CDS | 15.0% |
| !! | AAAATTAGAAAAATGGATAA+GGG | + | chr7_2:14533591-14533610 | Msa1050280:CDS | 15.0% |
| !!! | CAAAAACAAAAATTTTGTTT+TGG | + | chr7_2:14533420-14533439 | Msa1050280:CDS | 15.0% |
| !! | TTATAGCAAAATTAGAAAAA+TGG | + | chr7_2:14533584-14533603 | Msa1050280:CDS | 15.0% |
| !! | AAAATTAGAAAAATGGATAA+GGG | + | chr7_2:14533591-14533610 | Msa1050280:CDS | 15.0% |
| !!! | TTTTTTTGAACCAAAAGTTA+AGG | + | chr7_2:14533203-14533222 | Msa1050280:CDS | 20.0% |
| !! | CAAAATTAGAAAAATGGATA+AGG | + | chr7_2:14533590-14533609 | Msa1050280:CDS | 20.0% |
| !! | TACATTGTTGTCTAAATATT+TGG | + | chr7_2:14533632-14533651 | Msa1050280:CDS | 20.0% |
| !!! | TTTTTTTGAACCAAAAGTTA+AGG | + | chr7_2:14533203-14533222 | Msa1050280:CDS | 20.0% |
| !! | CAAAATTAGAAAAATGGATA+AGG | + | chr7_2:14533590-14533609 | Msa1050280:CDS | 20.0% |
| !! | TACATTGTTGTCTAAATATT+TGG | + | chr7_2:14533632-14533651 | Msa1050280:CDS | 20.0% |
| ! | AGTTTCCTTTGATAAAATTG+TGG | + | chr7_2:14532804-14532823 | Msa1050280:CDS | 25.0% |
| ! | TTCTTCAATATTGTTCCATT+TGG | - | chr7_2:14533295-14533314 | None:intergenic | 25.0% |
| ! | AAATGGAACAATATTGAAGA+AGG | + | chr7_2:14533294-14533313 | Msa1050280:CDS | 25.0% |
| ! | ACAAAAGTTGACAATTTCTT+TGG | - | chr7_2:14533339-14533358 | None:intergenic | 25.0% |
| ! | ACAATTTCCGAAATAGATTT+CGG | - | chr7_2:14533487-14533506 | None:intergenic | 25.0% |
| ! | TCTAAATATTTGGCTATGAT+TGG | + | chr7_2:14533642-14533661 | Msa1050280:CDS | 25.0% |
| !!! | TATGAGATTGATTTTGGTTA+TGG | + | chr7_2:14533714-14533733 | Msa1050280:CDS | 25.0% |
| !!! | TTTCATACCATTTTTCATGA+AGG | + | chr7_2:14533861-14533880 | Msa1050280:CDS | 25.0% |
| !!! | TTCATACCATTTTTCATGAA+GGG | + | chr7_2:14533862-14533881 | Msa1050280:CDS | 25.0% |
| ! | AGTTTCCTTTGATAAAATTG+TGG | + | chr7_2:14532804-14532823 | Msa1050280:CDS | 25.0% |
| ! | TTCTTCAATATTGTTCCATT+TGG | - | chr7_2:14533295-14533314 | None:intergenic | 25.0% |
| ! | AAATGGAACAATATTGAAGA+AGG | + | chr7_2:14533294-14533313 | Msa1050280:CDS | 25.0% |
| ! | ACAAAAGTTGACAATTTCTT+TGG | - | chr7_2:14533339-14533358 | None:intergenic | 25.0% |
| ! | ACAATTTCCGAAATAGATTT+CGG | - | chr7_2:14533487-14533506 | None:intergenic | 25.0% |
| ! | TCTAAATATTTGGCTATGAT+TGG | + | chr7_2:14533642-14533661 | Msa1050280:CDS | 25.0% |
| !!! | TATGAGATTGATTTTGGTTA+TGG | + | chr7_2:14533714-14533733 | Msa1050280:CDS | 25.0% |
| !!! | TTTCATACCATTTTTCATGA+AGG | + | chr7_2:14533861-14533880 | Msa1050280:CDS | 25.0% |
| !!! | TTCATACCATTTTTCATGAA+GGG | + | chr7_2:14533862-14533881 | Msa1050280:CDS | 25.0% |
| !! | GATAATTGGTTTGCAGAATT+AGG | - | chr7_2:14532511-14532530 | None:intergenic | 30.0% |
| TCACTTTCTTAGACTTGAAT+TGG | + | chr7_2:14532539-14532558 | Msa1050280:CDS | 30.0% | |
| AGAAGAAAATACGTTCAACT+GGG | - | chr7_2:14532576-14532595 | None:intergenic | 30.0% | |
| TAGAAGAAAATACGTTCAAC+TGG | - | chr7_2:14532577-14532596 | None:intergenic | 30.0% | |
| !!! | GGTTTTGAAAGAAGAAAGTA+GGG | - | chr7_2:14532624-14532643 | None:intergenic | 30.0% |
| !!! | AGGTTTTGAAAGAAGAAAGT+AGG | - | chr7_2:14532625-14532644 | None:intergenic | 30.0% |
| !!! | AAGATTTGAGTTTTGGAACA+AGG | - | chr7_2:14532645-14532664 | None:intergenic | 30.0% |
| ! | ATAACTCTTTTTCCGAAAAG+TGG | + | chr7_2:14532919-14532938 | Msa1050280:CDS | 30.0% |
| CTCAAAAAGGGTTTCAAAAA+AGG | - | chr7_2:14533069-14533088 | None:intergenic | 30.0% | |
| !!! | TTTTGAAACCCTTTTTGAGT+AGG | + | chr7_2:14533070-14533089 | Msa1050280:CDS | 30.0% |
| !!! | TTTGAAACCCTTTTTGAGTA+GGG | + | chr7_2:14533071-14533090 | Msa1050280:CDS | 30.0% |
| ATTACTTCCCTACTCAAAAA+GGG | - | chr7_2:14533081-14533100 | None:intergenic | 30.0% | |
| AGAGTGAGATCATAAATAGT+TGG | + | chr7_2:14533121-14533140 | Msa1050280:CDS | 30.0% | |
| !! | TATTGCTTTTGCTATGCAAA+CGG | - | chr7_2:14533382-14533401 | None:intergenic | 30.0% |
| !!! | ATTTTGTTTTGGTTTTGCAG+TGG | + | chr7_2:14533431-14533450 | Msa1050280:CDS | 30.0% |
| CAATTTCCGAAATAGATTTC+GGG | - | chr7_2:14533486-14533505 | None:intergenic | 30.0% | |
| !! | GGAGTATATGAGATTGATTT+TGG | + | chr7_2:14533708-14533727 | Msa1050280:CDS | 30.0% |
| !!! | AGATTGATTTTGGTTATGGA+AGG | + | chr7_2:14533718-14533737 | Msa1050280:CDS | 30.0% |
| ! | GTTGATAGAGGAATAACAAT+TGG | + | chr7_2:14533765-14533784 | Msa1050280:CDS | 30.0% |
| ACAGAAAGTAGAGATTTGAA+AGG | + | chr7_2:14533792-14533811 | Msa1050280:CDS | 30.0% | |
| !! | GATAATTGGTTTGCAGAATT+AGG | - | chr7_2:14532511-14532530 | None:intergenic | 30.0% |
| TCACTTTCTTAGACTTGAAT+TGG | + | chr7_2:14532539-14532558 | Msa1050280:CDS | 30.0% | |
| AGAAGAAAATACGTTCAACT+GGG | - | chr7_2:14532576-14532595 | None:intergenic | 30.0% | |
| TAGAAGAAAATACGTTCAAC+TGG | - | chr7_2:14532577-14532596 | None:intergenic | 30.0% | |
| !!! | GGTTTTGAAAGAAGAAAGTA+GGG | - | chr7_2:14532624-14532643 | None:intergenic | 30.0% |
| !!! | AGGTTTTGAAAGAAGAAAGT+AGG | - | chr7_2:14532625-14532644 | None:intergenic | 30.0% |
| !!! | AAGATTTGAGTTTTGGAACA+AGG | - | chr7_2:14532645-14532664 | None:intergenic | 30.0% |
| ! | ATAACTCTTTTTCCGAAAAG+TGG | + | chr7_2:14532919-14532938 | Msa1050280:CDS | 30.0% |
| CTCAAAAAGGGTTTCAAAAA+AGG | - | chr7_2:14533069-14533088 | None:intergenic | 30.0% | |
| !!! | TTTTGAAACCCTTTTTGAGT+AGG | + | chr7_2:14533070-14533089 | Msa1050280:CDS | 30.0% |
| !!! | TTTGAAACCCTTTTTGAGTA+GGG | + | chr7_2:14533071-14533090 | Msa1050280:CDS | 30.0% |
| ATTACTTCCCTACTCAAAAA+GGG | - | chr7_2:14533081-14533100 | None:intergenic | 30.0% | |
| AGAGTGAGATCATAAATAGT+TGG | + | chr7_2:14533121-14533140 | Msa1050280:CDS | 30.0% | |
| !! | TATTGCTTTTGCTATGCAAA+CGG | - | chr7_2:14533382-14533401 | None:intergenic | 30.0% |
| !!! | ATTTTGTTTTGGTTTTGCAG+TGG | + | chr7_2:14533431-14533450 | Msa1050280:CDS | 30.0% |
| CAATTTCCGAAATAGATTTC+GGG | - | chr7_2:14533486-14533505 | None:intergenic | 30.0% | |
| !! | GGAGTATATGAGATTGATTT+TGG | + | chr7_2:14533708-14533727 | Msa1050280:CDS | 30.0% |
| !!! | AGATTGATTTTGGTTATGGA+AGG | + | chr7_2:14533718-14533737 | Msa1050280:CDS | 30.0% |
| ! | GTTGATAGAGGAATAACAAT+TGG | + | chr7_2:14533765-14533784 | Msa1050280:CDS | 30.0% |
| ACAGAAAGTAGAGATTTGAA+AGG | + | chr7_2:14533792-14533811 | Msa1050280:CDS | 30.0% | |
| AAGTGAGAGGAAGAGATAAT+TGG | - | chr7_2:14532525-14532544 | None:intergenic | 35.0% | |
| TTCAAGTCTAAGAAAGTGAG+AGG | - | chr7_2:14532538-14532557 | None:intergenic | 35.0% | |
| TAGGGTGTGATTGTGAATTT+GGG | - | chr7_2:14532606-14532625 | None:intergenic | 35.0% | |
| !! | GAGAGTGAAGATTTGAGTTT+TGG | - | chr7_2:14532652-14532671 | None:intergenic | 35.0% |
| !! | TATAGGGAGAAAGTATTGGA+GGG | - | chr7_2:14532680-14532699 | None:intergenic | 35.0% |
| ! | AAACAATGTTACCGGCTATA+GGG | - | chr7_2:14532696-14532715 | None:intergenic | 35.0% |
| !!! | ATTGGTTTTGGAGAATCAGA+AGG | - | chr7_2:14532721-14532740 | None:intergenic | 35.0% |
| !!! | TTGAACTGGATGATTGGTTT+TGG | - | chr7_2:14532733-14532752 | None:intergenic | 35.0% |
| TTTGGATTGAACTGGATGAT+TGG | - | chr7_2:14532739-14532758 | None:intergenic | 35.0% | |
| CAGTTCAATCCAAAAGATGA+CGG | + | chr7_2:14532745-14532764 | Msa1050280:CDS | 35.0% | |
| ! | CTGCTCCACAATTTTATCAA+AGG | - | chr7_2:14532812-14532831 | None:intergenic | 35.0% |
| ! | GAATCAGTTGATTCTAAGTG+AGG | - | chr7_2:14532874-14532893 | None:intergenic | 35.0% |
| !! | CCAATGGAAAAACCACTTTT+CGG | - | chr7_2:14532934-14532953 | None:intergenic | 35.0% |
| ATGATGTGTGCTTATTCCAA+TGG | - | chr7_2:14532950-14532969 | None:intergenic | 35.0% | |
| GATTACTTCCCTACTCAAAA+AGG | - | chr7_2:14533082-14533101 | None:intergenic | 35.0% | |
| TTTGAGTAGGGAAGTAATCA+AGG | + | chr7_2:14533083-14533102 | Msa1050280:CDS | 35.0% | |
| GAAGTAATCAAGGATCCAAA+TGG | + | chr7_2:14533093-14533112 | Msa1050280:CDS | 35.0% | |
| ATCTCACTCTCAAAACCATT+TGG | - | chr7_2:14533111-14533130 | None:intergenic | 35.0% | |
| ! | ACAAAAGTGTGTTGTCCAAA+TGG | + | chr7_2:14533277-14533296 | Msa1050280:CDS | 35.0% |
| AAATAGATTTCGGGAATTGG+TGG | - | chr7_2:14533477-14533496 | None:intergenic | 35.0% | |
| CCAATTCCCGAAATCTATTT+CGG | + | chr7_2:14533477-14533496 | Msa1050280:CDS | 35.0% | |
| ! | ATGGATAAGGGTTTTCTTGA+TGG | + | chr7_2:14533603-14533622 | Msa1050280:CDS | 35.0% |
| TATTTGGCTATGATTGGTGA+AGG | + | chr7_2:14533648-14533667 | Msa1050280:CDS | 35.0% | |
| ATGATTGGTGAAGGAATTCA+AGG | + | chr7_2:14533657-14533676 | Msa1050280:CDS | 35.0% | |
| GAAAGTAGAGATTTGAAAGG+TGG | + | chr7_2:14533795-14533814 | Msa1050280:CDS | 35.0% | |
| ! | TTGAAAGGTGGTGTTGAATT+TGG | + | chr7_2:14533807-14533826 | Msa1050280:CDS | 35.0% |
| ! | TGAAAGGTGGTGTTGAATTT+GGG | + | chr7_2:14533808-14533827 | Msa1050280:CDS | 35.0% |
| GCATAACCCTTCATGAAAAA+TGG | - | chr7_2:14533871-14533890 | None:intergenic | 35.0% | |
| AAGTGAGAGGAAGAGATAAT+TGG | - | chr7_2:14532525-14532544 | None:intergenic | 35.0% | |
| TTCAAGTCTAAGAAAGTGAG+AGG | - | chr7_2:14532538-14532557 | None:intergenic | 35.0% | |
| TAGGGTGTGATTGTGAATTT+GGG | - | chr7_2:14532606-14532625 | None:intergenic | 35.0% | |
| !! | GAGAGTGAAGATTTGAGTTT+TGG | - | chr7_2:14532652-14532671 | None:intergenic | 35.0% |
| !! | TATAGGGAGAAAGTATTGGA+GGG | - | chr7_2:14532680-14532699 | None:intergenic | 35.0% |
| ! | AAACAATGTTACCGGCTATA+GGG | - | chr7_2:14532696-14532715 | None:intergenic | 35.0% |
| !!! | ATTGGTTTTGGAGAATCAGA+AGG | - | chr7_2:14532721-14532740 | None:intergenic | 35.0% |
| !!! | TTGAACTGGATGATTGGTTT+TGG | - | chr7_2:14532733-14532752 | None:intergenic | 35.0% |
| TTTGGATTGAACTGGATGAT+TGG | - | chr7_2:14532739-14532758 | None:intergenic | 35.0% | |
| CAGTTCAATCCAAAAGATGA+CGG | + | chr7_2:14532745-14532764 | Msa1050280:CDS | 35.0% | |
| ! | CTGCTCCACAATTTTATCAA+AGG | - | chr7_2:14532812-14532831 | None:intergenic | 35.0% |
| ! | GAATCAGTTGATTCTAAGTG+AGG | - | chr7_2:14532874-14532893 | None:intergenic | 35.0% |
| !! | CCAATGGAAAAACCACTTTT+CGG | - | chr7_2:14532934-14532953 | None:intergenic | 35.0% |
| ATGATGTGTGCTTATTCCAA+TGG | - | chr7_2:14532950-14532969 | None:intergenic | 35.0% | |
| GATTACTTCCCTACTCAAAA+AGG | - | chr7_2:14533082-14533101 | None:intergenic | 35.0% | |
| TTTGAGTAGGGAAGTAATCA+AGG | + | chr7_2:14533083-14533102 | Msa1050280:CDS | 35.0% | |
| GAAGTAATCAAGGATCCAAA+TGG | + | chr7_2:14533093-14533112 | Msa1050280:CDS | 35.0% | |
| ATCTCACTCTCAAAACCATT+TGG | - | chr7_2:14533111-14533130 | None:intergenic | 35.0% | |
| ! | ACAAAAGTGTGTTGTCCAAA+TGG | + | chr7_2:14533277-14533296 | Msa1050280:CDS | 35.0% |
| AAATAGATTTCGGGAATTGG+TGG | - | chr7_2:14533477-14533496 | None:intergenic | 35.0% | |
| CCAATTCCCGAAATCTATTT+CGG | + | chr7_2:14533477-14533496 | Msa1050280:CDS | 35.0% | |
| ! | ATGGATAAGGGTTTTCTTGA+TGG | + | chr7_2:14533603-14533622 | Msa1050280:CDS | 35.0% |
| TATTTGGCTATGATTGGTGA+AGG | + | chr7_2:14533648-14533667 | Msa1050280:CDS | 35.0% | |
| ATGATTGGTGAAGGAATTCA+AGG | + | chr7_2:14533657-14533676 | Msa1050280:CDS | 35.0% | |
| GAAAGTAGAGATTTGAAAGG+TGG | + | chr7_2:14533795-14533814 | Msa1050280:CDS | 35.0% | |
| ! | TTGAAAGGTGGTGTTGAATT+TGG | + | chr7_2:14533807-14533826 | Msa1050280:CDS | 35.0% |
| ! | TGAAAGGTGGTGTTGAATTT+GGG | + | chr7_2:14533808-14533827 | Msa1050280:CDS | 35.0% |
| GCATAACCCTTCATGAAAAA+TGG | - | chr7_2:14533871-14533890 | None:intergenic | 35.0% | |
| TGTGATTGTGAATTTGGGAG+GGG | - | chr7_2:14532601-14532620 | None:intergenic | 40.0% | |
| GTGTGATTGTGAATTTGGGA+GGG | - | chr7_2:14532602-14532621 | None:intergenic | 40.0% | |
| GTAGGGTGTGATTGTGAATT+TGG | - | chr7_2:14532607-14532626 | None:intergenic | 40.0% | |
| !! | CTATAGGGAGAAAGTATTGG+AGG | - | chr7_2:14532681-14532700 | None:intergenic | 40.0% |
| CAATACTTTCTCCCTATAGC+CGG | + | chr7_2:14532682-14532701 | Msa1050280:CDS | 40.0% | |
| ! | CAAACAATGTTACCGGCTAT+AGG | - | chr7_2:14532697-14532716 | None:intergenic | 40.0% |
| CTATAGCCGGTAACATTGTT+TGG | + | chr7_2:14532695-14532714 | Msa1050280:CDS | 40.0% | |
| AGAAGGCCAAACAATGTTAC+CGG | - | chr7_2:14532704-14532723 | None:intergenic | 40.0% | |
| ! | CGTCATCTTTTGGATTGAAC+TGG | - | chr7_2:14532747-14532766 | None:intergenic | 40.0% |
| ! | AACGAAACTCCGTCATCTTT+TGG | - | chr7_2:14532757-14532776 | None:intergenic | 40.0% |
| CGAGATAAAGAAGCTTCTTG+TGG | - | chr7_2:14532841-14532860 | None:intergenic | 40.0% | |
| ! | CCGAAAAGTGGTTTTTCCAT+TGG | + | chr7_2:14532931-14532950 | Msa1050280:CDS | 40.0% |
| ACACATCATGCTGTTCTTGA+TGG | + | chr7_2:14532961-14532980 | Msa1050280:CDS | 40.0% | |
| CAACCATGTTCATCAAAGCA+TGG | + | chr7_2:14532992-14533011 | Msa1050280:CDS | 40.0% | |
| AGACCATGCTTTGATGAACA+TGG | - | chr7_2:14532998-14533017 | None:intergenic | 40.0% | |
| ! | CGAACGGAATCCTTAACTTT+TGG | - | chr7_2:14533216-14533235 | None:intergenic | 40.0% |
| CCGAAATAGATTTCGGGAAT+TGG | - | chr7_2:14533480-14533499 | None:intergenic | 40.0% | |
| TCTTCCTTGGTAAAGTCTTC+TGG | - | chr7_2:14533537-14533556 | None:intergenic | 40.0% | |
| GAAGACTTTACCAAGGAAGA+TGG | + | chr7_2:14533537-14533556 | Msa1050280:CDS | 40.0% | |
| GGTGAAGGAATTCAAGGAAT+AGG | + | chr7_2:14533663-14533682 | Msa1050280:CDS | 40.0% | |
| ATTCAAGGAATAGGAGTTGC+AGG | + | chr7_2:14533672-14533691 | Msa1050280:CDS | 40.0% | |
| TTCAAGGAATAGGAGTTGCA+GGG | + | chr7_2:14533673-14533692 | Msa1050280:CDS | 40.0% | |
| !! | GAGACAACTTCAGTTGATAG+AGG | + | chr7_2:14533753-14533772 | Msa1050280:CDS | 40.0% |
| TGTTCTTGATAAGCACGTGA+TGG | + | chr7_2:14533833-14533852 | Msa1050280:CDS | 40.0% | |
| GTTCTTGATAAGCACGTGAT+GGG | + | chr7_2:14533834-14533853 | Msa1050280:CDS | 40.0% | |
| TGTGATTGTGAATTTGGGAG+GGG | - | chr7_2:14532601-14532620 | None:intergenic | 40.0% | |
| GTGTGATTGTGAATTTGGGA+GGG | - | chr7_2:14532602-14532621 | None:intergenic | 40.0% | |
| GTAGGGTGTGATTGTGAATT+TGG | - | chr7_2:14532607-14532626 | None:intergenic | 40.0% | |
| !! | CTATAGGGAGAAAGTATTGG+AGG | - | chr7_2:14532681-14532700 | None:intergenic | 40.0% |
| CAATACTTTCTCCCTATAGC+CGG | + | chr7_2:14532682-14532701 | Msa1050280:CDS | 40.0% | |
| ! | CAAACAATGTTACCGGCTAT+AGG | - | chr7_2:14532697-14532716 | None:intergenic | 40.0% |
| CTATAGCCGGTAACATTGTT+TGG | + | chr7_2:14532695-14532714 | Msa1050280:CDS | 40.0% | |
| AGAAGGCCAAACAATGTTAC+CGG | - | chr7_2:14532704-14532723 | None:intergenic | 40.0% | |
| ! | CGTCATCTTTTGGATTGAAC+TGG | - | chr7_2:14532747-14532766 | None:intergenic | 40.0% |
| ! | AACGAAACTCCGTCATCTTT+TGG | - | chr7_2:14532757-14532776 | None:intergenic | 40.0% |
| CGAGATAAAGAAGCTTCTTG+TGG | - | chr7_2:14532841-14532860 | None:intergenic | 40.0% | |
| ! | CCGAAAAGTGGTTTTTCCAT+TGG | + | chr7_2:14532931-14532950 | Msa1050280:CDS | 40.0% |
| ACACATCATGCTGTTCTTGA+TGG | + | chr7_2:14532961-14532980 | Msa1050280:CDS | 40.0% | |
| CAACCATGTTCATCAAAGCA+TGG | + | chr7_2:14532992-14533011 | Msa1050280:CDS | 40.0% | |
| AGACCATGCTTTGATGAACA+TGG | - | chr7_2:14532998-14533017 | None:intergenic | 40.0% | |
| ! | CGAACGGAATCCTTAACTTT+TGG | - | chr7_2:14533216-14533235 | None:intergenic | 40.0% |
| CCGAAATAGATTTCGGGAAT+TGG | - | chr7_2:14533480-14533499 | None:intergenic | 40.0% | |
| TCTTCCTTGGTAAAGTCTTC+TGG | - | chr7_2:14533537-14533556 | None:intergenic | 40.0% | |
| GAAGACTTTACCAAGGAAGA+TGG | + | chr7_2:14533537-14533556 | Msa1050280:CDS | 40.0% | |
| GGTGAAGGAATTCAAGGAAT+AGG | + | chr7_2:14533663-14533682 | Msa1050280:CDS | 40.0% | |
| ATTCAAGGAATAGGAGTTGC+AGG | + | chr7_2:14533672-14533691 | Msa1050280:CDS | 40.0% | |
| TTCAAGGAATAGGAGTTGCA+GGG | + | chr7_2:14533673-14533692 | Msa1050280:CDS | 40.0% | |
| !! | GAGACAACTTCAGTTGATAG+AGG | + | chr7_2:14533753-14533772 | Msa1050280:CDS | 40.0% |
| TGTTCTTGATAAGCACGTGA+TGG | + | chr7_2:14533833-14533852 | Msa1050280:CDS | 40.0% | |
| GTTCTTGATAAGCACGTGAT+GGG | + | chr7_2:14533834-14533853 | Msa1050280:CDS | 40.0% | |
| GTGATTGTGAATTTGGGAGG+GGG | - | chr7_2:14532600-14532619 | None:intergenic | 45.0% | |
| GGTGTGATTGTGAATTTGGG+AGG | - | chr7_2:14532603-14532622 | None:intergenic | 45.0% | |
| ! | CGGCTATAGGGAGAAAGTAT+TGG | - | chr7_2:14532684-14532703 | None:intergenic | 45.0% |
| TGAGCTCACACGTGAAGATT+TGG | + | chr7_2:14533245-14533264 | Msa1050280:CDS | 45.0% | |
| TGAGCCAGAAGACTTTACCA+AGG | + | chr7_2:14533530-14533549 | Msa1050280:CDS | 45.0% | |
| CTTTACCAAGGAAGATGGAG+TGG | + | chr7_2:14533542-14533561 | Msa1050280:CDS | 45.0% | |
| AATCACCACTCCATCTTCCT+TGG | - | chr7_2:14533550-14533569 | None:intergenic | 45.0% | |
| TTATGGAAGGCCTGCAAAAG+TGG | + | chr7_2:14533731-14533750 | Msa1050280:CDS | 45.0% | |
| !! | GAAGTTGTCTCCACTTTTGC+AGG | - | chr7_2:14533744-14533763 | None:intergenic | 45.0% |
| GTGATTGTGAATTTGGGAGG+GGG | - | chr7_2:14532600-14532619 | None:intergenic | 45.0% | |
| GGTGTGATTGTGAATTTGGG+AGG | - | chr7_2:14532603-14532622 | None:intergenic | 45.0% | |
| ! | CGGCTATAGGGAGAAAGTAT+TGG | - | chr7_2:14532684-14532703 | None:intergenic | 45.0% |
| TGAGCTCACACGTGAAGATT+TGG | + | chr7_2:14533245-14533264 | Msa1050280:CDS | 45.0% | |
| TGAGCCAGAAGACTTTACCA+AGG | + | chr7_2:14533530-14533549 | Msa1050280:CDS | 45.0% | |
| CTTTACCAAGGAAGATGGAG+TGG | + | chr7_2:14533542-14533561 | Msa1050280:CDS | 45.0% | |
| AATCACCACTCCATCTTCCT+TGG | - | chr7_2:14533550-14533569 | None:intergenic | 45.0% | |
| TTATGGAAGGCCTGCAAAAG+TGG | + | chr7_2:14533731-14533750 | Msa1050280:CDS | 45.0% | |
| !! | GAAGTTGTCTCCACTTTTGC+AGG | - | chr7_2:14533744-14533763 | None:intergenic | 45.0% |
| GAGCTCAAATGCGACTCGAA+CGG | - | chr7_2:14533232-14533251 | None:intergenic | 50.0% | |
| TAGGAGTTGCAGGGTCAACA+AGG | + | chr7_2:14533682-14533701 | Msa1050280:CDS | 50.0% | |
| GTTGCAGGGTCAACAAGGTT+TGG | + | chr7_2:14533687-14533706 | Msa1050280:CDS | 50.0% | |
| GAGCTCAAATGCGACTCGAA+CGG | - | chr7_2:14533232-14533251 | None:intergenic | 50.0% | |
| TAGGAGTTGCAGGGTCAACA+AGG | + | chr7_2:14533682-14533701 | Msa1050280:CDS | 50.0% | |
| GTTGCAGGGTCAACAAGGTT+TGG | + | chr7_2:14533687-14533706 | Msa1050280:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 14532457 | 14533899 | 14532457 | ID=Msa1050280;Name=Msa1050280 |
| chr7_2 | mRNA | 14532457 | 14533899 | 14532457 | ID=Msa1050280-mRNA-1;Parent=Msa1050280;Name=Msa1050280-mRNA-1;_AED=0.25;_eAED=0.25;_QI=0|-1|0|1|-1|1|1|0|480 |
| chr7_2 | exon | 14532457 | 14533899 | 14532457 | ID=Msa1050280-mRNA-1:exon:3529;Parent=Msa1050280-mRNA-1 |
| chr7_2 | CDS | 14532457 | 14533899 | 14532457 | ID=Msa1050280-mRNA-1:cds;Parent=Msa1050280-mRNA-1 |
| Gene Sequence |
| Protein sequence |
