AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0378440


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0378440 MtrunA17_Chr3g0130841 94.990 519 5 2 1 498 1 519 0.0 994
Msa0378440 MtrunA17_Chr8g0384891 72.929 495 102 7 30 496 43 533 0.0 722
Msa0378440 MtrunA17_Chr8g0386311 52.532 474 190 7 12 451 14 486 5.54e-170 490
Msa0378440 MtrunA17_Chr3g0132111 55.580 448 173 6 28 450 33 479 9.96e-167 481
Msa0378440 MtrunA17_Chr8g0355581 75.758 66 16 0 30 95 46 111 8.80e-27 104
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0378440 AT3G52950.1 63.910 532 145 10 9 496 26 554 0.0 638
Msa0378440 AT3G52950.2 63.910 532 145 10 9 496 26 554 0.0 638
Msa0378440 AT2G36500.1 62.800 500 154 8 22 498 46 536 0.0 602
Msa0378440 AT5G50640.1 54.260 446 174 6 32 452 59 499 1.64e-166 482
Msa0378440 AT5G50530.1 54.260 446 174 6 32 452 59 499 1.64e-166 482
Msa0378440 AT5G63490.1 53.333 450 179 6 25 449 44 487 1.94e-157 459
Msa0378440 AT5G63490.2 53.333 450 179 6 25 449 44 487 1.94e-157 459

Find 139 sgRNAs with CRISPR-Local

Find 405 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTCCAGTGCTCTTCTTTC+TGG 0.070734 3_1:-79265550 Msa0378440:CDS
TCAGGCTCTAAAATTGAATT+TGG 0.178022 3_1:-79260380 Msa0378440:intron
CAGTGATATGTTTGCCAGTT+TGG 0.197712 3_1:-79260211 Msa0378440:exon
TCACCTCATAAATTATAAAT+TGG 0.210091 3_1:+79266076 None:intergenic
AAATCCCACGCCGCCGAAAA+TGG 0.223400 3_1:-79265861 Msa0378440:CDS
TTCGGCGGCGTGGGATTTCT+TGG 0.251228 3_1:+79265866 None:intergenic
ACATATCAATCTGCAGGTTT+TGG 0.253173 3_1:-79260959 Msa0378440:CDS
AACAGGTTTGTTAGTTAGTT+AGG 0.274267 3_1:+79266031 None:intergenic
TGCTCTTCAAAAGATGATTC+AGG 0.280532 3_1:-79265311 Msa0378440:CDS
CGTATTGTTCAGTTCATATT+GGG 0.281546 3_1:-79259957 Msa0378440:three_prime_UTR
TGTAACAGAAAGCAAGATTC+AGG 0.296243 3_1:-79262534 Msa0378440:CDS
TCGTATTGTTCAGTTCATAT+TGG 0.305918 3_1:-79259958 Msa0378440:three_prime_UTR
ATTGCTGCTGCTGCAGTTGA+GGG 0.329006 3_1:-79264277 Msa0378440:CDS
CGGTGAAGTCATTGCCATAT+TGG 0.350685 3_1:-79264365 Msa0378440:CDS
ACATTTGGTGATATCCAATA+TGG 0.362117 3_1:+79264351 None:intergenic
AGACATTCTTATGCGTGTTA+TGG 0.363155 3_1:-79262332 Msa0378440:CDS
CTGTTAGTGTCGTAATCTTC+AGG 0.365694 3_1:+79261135 None:intergenic
TCTAACAAGCATCAGTATAT+TGG 0.370708 3_1:-79260254 Msa0378440:CDS
AATGTTGCACATTGTGGGTT+TGG 0.373583 3_1:+79262156 None:intergenic
CATTGCTGCTGCTGCAGTTG+AGG 0.374781 3_1:-79264278 Msa0378440:CDS
AAACCAATTTATAATTTATG+AGG 0.375367 3_1:-79266079 Msa0378440:five_prime_UTR
AATGTATCAATGAAAGCATT+TGG 0.380230 3_1:+79262790 None:intergenic
GTCGACTCTGGTGAAAGATT+TGG 0.385359 3_1:+79262307 None:intergenic
CTGAAGATTACGACACTAAC+AGG 0.390508 3_1:-79261134 Msa0378440:intron
CTATACAATTGAATATACTA+TGG 0.392070 3_1:+79265968 None:intergenic
TCGGTAACGGTTGTCCCATC+GGG 0.392520 3_1:+79265622 None:intergenic
AATATTTGCTCAAACTGAAT+AGG 0.398865 3_1:-79260136 Msa0378440:three_prime_UTR
GGGCGTTCTCCATCATTAAC+AGG 0.414065 3_1:+79260691 None:intergenic
ATTCAATTGTATAGTGGTAC+AGG 0.415361 3_1:-79265959 Msa0378440:five_prime_UTR
TGCATGTTCTGTTTCCAAAC+TGG 0.417169 3_1:+79260197 None:intergenic
TTAGTGGCTATATCAGTGTT+TGG 0.417175 3_1:+79260331 None:intergenic
TACAGGTTTATTGATACATT+TGG 0.422299 3_1:-79265942 Msa0378440:five_prime_UTR
TCTCTAATGTTGCACATTGT+GGG 0.428457 3_1:+79262151 None:intergenic
TCAGCTGTTATGCAAAGAAT+TGG 0.437457 3_1:-79260715 Msa0378440:CDS
TATGGCATCATAAAGACATT+TGG 0.438634 3_1:+79264336 None:intergenic
AACTGATGATAGGTAAATTC+AGG 0.442199 3_1:-79264408 Msa0378440:intron
AGGATTGCGTGTCATAACTT+TGG 0.448579 3_1:+79265366 None:intergenic
ACAGGTTTGTTAGTTAGTTA+GGG 0.449078 3_1:+79266032 None:intergenic
GTCTCTAATGTTGCACATTG+TGG 0.452909 3_1:+79262150 None:intergenic
TTTAAATTTGAGGATCTCAA+TGG 0.454506 3_1:-79260923 Msa0378440:CDS
TTCCAGGGTTGCTATTACAT+CGG 0.458147 3_1:-79262621 Msa0378440:intron
TCTCTATTACAATTCACAAC+AGG 0.460397 3_1:+79266014 None:intergenic
GTATCAGATGTAACAAAGAT+AGG 0.460399 3_1:+79265346 None:intergenic
TGCTTTCATTGATACATTGA+GGG 0.461658 3_1:-79262785 Msa0378440:CDS
AACTCATGCTGCAATTTCTC+TGG 0.465350 3_1:-79261952 Msa0378440:intron
AGTATAGTGTCTCTCCGCTC+TGG 0.468544 3_1:-79260298 Msa0378440:CDS
AGTCTCTGGACAACTGACTT+TGG 0.469702 3_1:-79261005 Msa0378440:CDS
GCGGCGTGGGATTTCTTGGA+AGG 0.470508 3_1:+79265870 None:intergenic
TTAATTTGTTACAGGGGAGA+TGG 0.470973 3_1:-79265694 Msa0378440:intron
GTCAGCTATGCTAGATCTGC+AGG 0.473727 3_1:-79260510 Msa0378440:CDS
GTAATAGAGATATGTGGGGT+AGG 0.474280 3_1:-79266001 Msa0378440:five_prime_UTR
ATGCTTTCATTGATACATTG+AGG 0.474395 3_1:-79262786 Msa0378440:CDS
AGAGTCGACCCTAGTGGAAA+AGG 0.480922 3_1:-79262293 Msa0378440:intron
CACCTCCCAGTTGTGGAAAA+CGG 0.482727 3_1:-79264385 Msa0378440:CDS
AGGAGAAAGAACGGTGAAGA+AGG 0.483597 3_1:-79265671 Msa0378440:CDS
TCTGGACAACTGACTTTGGA+TGG 0.491544 3_1:-79261001 Msa0378440:CDS
CTGGCAAACATATCACTGAT+TGG 0.492857 3_1:+79260216 None:intergenic
ATCGGTAACGGTTGTCCCAT+CGG 0.495990 3_1:+79265621 None:intergenic
ATTATTATACATGGTAGGAG+AGG 0.501067 3_1:+79265824 None:intergenic
TGCTGCTGCTGCAGTTGAGG+GGG 0.501923 3_1:-79264275 Msa0378440:CDS
ATAAAACACACCAGCAGCCT+AGG 0.502251 3_1:+79260670 None:intergenic
TAATTTATGAGGTGACAGAA+TGG 0.504261 3_1:-79266068 Msa0378440:five_prime_UTR
CGTGGCATAAAATTATCAAA+TGG 0.505931 3_1:-79260013 Msa0378440:three_prime_UTR
CTCAACTGCAGCAGCAGCAA+TGG 0.506137 3_1:+79264279 None:intergenic
AATTCCAGAAAGAAGAGCAC+TGG 0.506917 3_1:+79265546 None:intergenic
TTGCTGCTGCTGCAGTTGAG+GGG 0.508378 3_1:-79264276 Msa0378440:CDS
AGAATTGGTCCTGTTAATGA+TGG 0.512502 3_1:-79260700 Msa0378440:CDS
AGAGCGGAGAGACACTATAC+TGG 0.513782 3_1:+79260300 None:intergenic
GTCTTTATGATGCCATAGCT+AGG 0.515525 3_1:-79264330 Msa0378440:CDS
GCTCTTCAAAAGATGATTCA+GGG 0.516098 3_1:-79265310 Msa0378440:intron
CAAGTGCATCGCTTTACCTC+TGG 0.522776 3_1:-79260899 Msa0378440:intron
TGCTACTAGAGTTGTGGCTG+AGG 0.523170 3_1:-79265416 Msa0378440:CDS
TTGGAGACATGTGTCTCATC+CGG 0.524343 3_1:+79265385 None:intergenic
TGCTAGATCTGCAGGACTGA+AGG 0.526558 3_1:-79260502 Msa0378440:intron
AACGGTTGTCCCATCGGGGA+TGG 0.529148 3_1:+79265627 None:intergenic
TGCCATAGCTAGGGTGGAGA+AGG 0.529899 3_1:-79264320 Msa0378440:CDS
ATTTGTTACAGGGGAGATGG+AGG 0.533375 3_1:-79265691 Msa0378440:intron
CCTTCCTTGTCAACTATACT+CGG 0.533430 3_1:-79262748 Msa0378440:CDS
CTGGACAACTGACTTTGGAT+GGG 0.533626 3_1:-79261000 Msa0378440:CDS
TAGTATATTCAATTGTATAG+TGG 0.536567 3_1:-79265965 Msa0378440:five_prime_UTR
TTATTATACATGGTAGGAGA+GGG 0.542811 3_1:+79265825 None:intergenic
AACGGCATCAACACGGCGAG+CGG 0.543554 3_1:+79265582 None:intergenic
TCGTCTACATGCATCGGTAA+CGG 0.544292 3_1:+79265609 None:intergenic
AAGTCCACATATCAATCTGC+AGG 0.547264 3_1:-79260965 Msa0378440:CDS
TAATAGAGATATGTGGGGTA+GGG 0.548452 3_1:-79266000 Msa0378440:five_prime_UTR
AGCCTTCTCCACCCTAGCTA+TGG 0.551559 3_1:+79264318 None:intergenic
TGAATTGTAATAGAGATATG+TGG 0.552039 3_1:-79266007 Msa0378440:five_prime_UTR
GCTACTAGAGTTGTGGCTGA+GGG 0.554985 3_1:-79265415 Msa0378440:CDS
CAGAGGTAAAGCGATGCACT+TGG 0.555381 3_1:+79260900 None:intergenic
TGGAGAACGCCCTAGGCTGC+TGG 0.555787 3_1:-79260680 Msa0378440:intron
ATTCAGGCACCTCCCAGTTG+TGG 0.559149 3_1:-79264392 Msa0378440:CDS
AGATTGATATGTGGACTTTG+TGG 0.559739 3_1:+79260970 None:intergenic
ACATCACCGTATACCACAGC+CGG 0.560177 3_1:+79259919 None:intergenic
CTCTGCATATGATGCATGAT+GGG 0.561994 3_1:-79262113 Msa0378440:CDS
TTATACATGGTAGGAGAGGG+AGG 0.562446 3_1:+79265828 None:intergenic
GGATGTTGCTACTAGAGTTG+TGG 0.566022 3_1:-79265422 Msa0378440:CDS
ATTCTAGTATGAAGATGATG+AGG 0.568263 3_1:-79260577 Msa0378440:intron
GTGGAGAAGGCTTCTCAGCA+AGG 0.569213 3_1:-79264307 Msa0378440:CDS
GTAACAGAAAGCAAGATTCA+GGG 0.570503 3_1:-79262533 Msa0378440:CDS
CACGCCGCCGAAAATGGAAA+CGG 0.572549 3_1:-79265855 Msa0378440:CDS
CATCTTCCTGTGGTGGACAA+AGG 0.574377 3_1:-79262081 Msa0378440:intron
TGGAGAAGGCTTCTCAGCAA+GGG 0.574591 3_1:-79264306 Msa0378440:CDS
AAGGCTCTCACCATCCCCGA+TGG 0.576780 3_1:-79265637 Msa0378440:CDS
AGTTTACCTTTGTCCACCAC+AGG 0.578285 3_1:+79262075 None:intergenic
CATAAAATTATCAAATGGCA+CGG 0.579493 3_1:-79260008 Msa0378440:three_prime_UTR
TTGAAGAGCATCAATGGCGA+GGG 0.580565 3_1:+79265324 None:intergenic
GTTCTTACATCTTCCTGTGG+TGG 0.581140 3_1:-79262088 Msa0378440:CDS
TTCTGGAATTCTCACTGACA+AGG 0.586382 3_1:-79265533 Msa0378440:intron
TGGACAACTGACTTTGGATG+GGG 0.589167 3_1:-79260999 Msa0378440:CDS
GGCCATTCGTCTACATGCAT+CGG 0.590598 3_1:+79265603 None:intergenic
TCTTTATGATGCCATAGCTA+GGG 0.590909 3_1:-79264329 Msa0378440:CDS
TTAATGATGGAGAACGCCCT+AGG 0.591361 3_1:-79260687 Msa0378440:CDS
GAATTGTAATAGAGATATGT+GGG 0.592429 3_1:-79266006 Msa0378440:five_prime_UTR
CCGAGTATAGTTGACAAGGA+AGG 0.598564 3_1:+79262748 None:intergenic
GCTCTGCATATGATGCATGA+TGG 0.603177 3_1:-79262114 Msa0378440:CDS
TACCGATGCATGTAGACGAA+TGG 0.605774 3_1:-79265605 Msa0378440:CDS
AAAACCTGCAGATTGATATG+TGG 0.608285 3_1:+79260961 None:intergenic
TTTGAAGAGCATCAATGGCG+AGG 0.608804 3_1:+79265323 None:intergenic
TTATGATGCCATAGCTAGGG+TGG 0.612168 3_1:-79264326 Msa0378440:CDS
AGGCTCTCACCATCCCCGAT+GGG 0.613211 3_1:-79265636 Msa0378440:CDS
TAAAACACACCAGCAGCCTA+GGG 0.618548 3_1:+79260671 None:intergenic
TGTGGCTGAGGGATTGTCAC+CGG 0.618577 3_1:-79265404 Msa0378440:CDS
GGGAGATGGAGGAGAAAGAA+CGG 0.618682 3_1:-79265680 Msa0378440:CDS
TAGAGATTATTATACATGGT+AGG 0.621954 3_1:+79265819 None:intergenic
GAAGTTCTTACATCTTCCTG+TGG 0.628573 3_1:-79262091 Msa0378440:CDS
TGGAAATGTCGTTGCTTGTG+TGG 0.631826 3_1:-79261988 Msa0378440:CDS
TTCACCGAGTATAGTTGACA+AGG 0.639130 3_1:+79262744 None:intergenic
ACATGTACTCATTTGTAGAG+AGG 0.640505 3_1:+79260047 None:intergenic
TAACAGAAAGCAAGATTCAG+GGG 0.644441 3_1:-79262532 Msa0378440:CDS
TTCTAGTATGAAGATGATGA+GGG 0.644723 3_1:-79260576 Msa0378440:intron
TTTGTAGAGAGGAGATTACT+CGG 0.646719 3_1:+79260058 None:intergenic
TTCACCAGAGTCGACCCTAG+TGG 0.647399 3_1:-79262299 Msa0378440:CDS
ACTGGAATCAGTTAAGAGAA+CGG 0.650872 3_1:+79265564 None:intergenic
GAAGAAGGTGAAATTGTCGA+AGG 0.656917 3_1:-79265656 Msa0378440:CDS
TTAAGAGAACGGCATCAACA+CGG 0.659257 3_1:+79265575 None:intergenic
TACATGTTGATATAAAGTCG+TGG 0.660395 3_1:-79260031 Msa0378440:three_prime_UTR
TTAGTGTCGTAATCTTCAGG+AGG 0.665881 3_1:+79261138 None:intergenic
CGGTAACGGTTGTCCCATCG+GGG 0.679014 3_1:+79265623 None:intergenic
AATTGTAATAGAGATATGTG+GGG 0.788949 3_1:-79266005 Msa0378440:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCTATATTACAATTAATTA+TGG - chr3_1:79260129-79260148 Msa0378440:three_prime_UTR 10.0%
!!! TATTATTATTAATTTGTTAC+AGG - chr3_1:79260201-79260220 Msa0378440:three_prime_UTR 10.0%
!!! ATTATTATTAATTTGTTACA+GGG - chr3_1:79260202-79260221 Msa0378440:three_prime_UTR 10.0%
!!! TTGTTATTTTTTTTTTTGAA+TGG - chr3_1:79262419-79262438 Msa0378440:intron 10.0%
!! AAAAAATTTCAAAAATTTGA+TGG - chr3_1:79262822-79262841 Msa0378440:intron 10.0%
!! AAAAATTATATAAACAACAT+AGG + chr3_1:79264808-79264827 None:intergenic 10.0%
!!! TGTTGTTTATATAATTTTTT+CGG - chr3_1:79264809-79264828 Msa0378440:intron 10.0%
!! TGTATTTAATATAATGATAT+CGG - chr3_1:79265293-79265312 Msa0378440:intron 10.0%
!! AAACCAATTTATAATTTATG+AGG - chr3_1:79259824-79259843 Msa0378440:three_prime_UTR 15.0%
!! TGTAGATTTATTTATAATTG+TGG - chr3_1:79260171-79260190 Msa0378440:three_prime_UTR 15.0%
!!! TTATTATTAATTTGTTACAG+GGG - chr3_1:79260203-79260222 Msa0378440:three_prime_UTR 15.0%
!! TATGTTTACATATTACTTAA+TGG - chr3_1:79261414-79261433 Msa0378440:intron 15.0%
!!! GTTTTATAGTTTAATTATCT+TGG - chr3_1:79261819-79261838 Msa0378440:intron 15.0%
!!! TATTTCATTCTTTTAAGATT+TGG - chr3_1:79261976-79261995 Msa0378440:CDS 15.0%
!! TAAACATGATTAATGATATT+AGG - chr3_1:79262333-79262352 Msa0378440:CDS 15.0%
!!! AAGCATTTTTTTTATCTTTA+TGG - chr3_1:79262526-79262545 Msa0378440:CDS 15.0%
!!! ATTTTTTTTATCTTTATGGA+AGG - chr3_1:79262530-79262549 Msa0378440:CDS 15.0%
!!! ATTTGATTTTCTTCTTTATT+AGG - chr3_1:79263716-79263735 Msa0378440:intron 15.0%
!!! TATTTCTTTAGTTTCATAAA+TGG - chr3_1:79264126-79264145 Msa0378440:intron 15.0%
!!! TTCATTTACTTTTAAATTTG+AGG - chr3_1:79264970-79264989 Msa0378440:intron 15.0%
!! ATCAAAAAATAATTCGTAAT+AGG - chr3_1:79266028-79266047 Msa0378440:five_prime_UTR 15.0%
!! TCACCTCATAAATTATAAAT+TGG + chr3_1:79259830-79259849 None:intergenic 20.0%
!! CTATACAATTGAATATACTA+TGG + chr3_1:79259938-79259957 None:intergenic 20.0%
!! TAGTATATTCAATTGTATAG+TGG - chr3_1:79259938-79259957 Msa0378440:three_prime_UTR 20.0%
!! TGAATAGAGATTATTATACA+TGG + chr3_1:79260091-79260110 None:intergenic 20.0%
!! AGAATAACAACAACAAAAAA+GGG + chr3_1:79260650-79260669 None:intergenic 20.0%
!!! TGTTTATCTTTTATTTCCTA+CGG - chr3_1:79260766-79260785 Msa0378440:intron 20.0%
!!! TTTTCTTTTGAAATTCATGT+AGG + chr3_1:79261018-79261037 None:intergenic 20.0%
!!! ATTTGCTGTTACAATTTTTT+TGG - chr3_1:79261231-79261250 Msa0378440:intron 20.0%
!!! TTTGCTGTTACAATTTTTTT+GGG - chr3_1:79261232-79261251 Msa0378440:intron 20.0%
!!! TTTTTTTCTTAACTGATGAT+AGG - chr3_1:79261485-79261504 Msa0378440:intron 20.0%
!! ACAAAATAATGAGAAAATAG+AGG - chr3_1:79261854-79261873 Msa0378440:intron 20.0%
!! CAAAATAATACTTCATCTTT+GGG - chr3_1:79261907-79261926 Msa0378440:intron 20.0%
!!! AAATTTTCCTTAGTGATAAA+TGG + chr3_1:79261956-79261975 None:intergenic 20.0%
!! ATGATTAATGATATTAGGAT+AGG - chr3_1:79262338-79262357 Msa0378440:CDS 20.0%
!! ATAATAAATAACAACCGAAA+TGG + chr3_1:79262445-79262464 None:intergenic 20.0%
!!! TTTCGGTTGTTATTTATTAT+TGG - chr3_1:79262445-79262464 Msa0378440:intron 20.0%
!!! TTCGGTTGTTATTTATTATT+GGG - chr3_1:79262446-79262465 Msa0378440:intron 20.0%
!!! CTGACAGTAAAATATAATTT+TGG - chr3_1:79262571-79262590 Msa0378440:CDS 20.0%
!!! AATTTTTTAAATTACAGCAG+AGG + chr3_1:79262810-79262829 None:intergenic 20.0%
!! AATCTAAGAAATTATAGAAG+CGG + chr3_1:79263866-79263885 None:intergenic 20.0%
!! CGATATTTATAAAGTCTATT+TGG - chr3_1:79263988-79264007 Msa0378440:intron 20.0%
!! AAAGCAAAACATTTGAATAA+TGG + chr3_1:79264170-79264189 None:intergenic 20.0%
!!! TTTTGCTTTAATTATGTCAT+AGG - chr3_1:79264181-79264200 Msa0378440:intron 20.0%
!! CTAACAAAATAAAGACATTT+GGG + chr3_1:79264325-79264344 None:intergenic 20.0%
!! ACTAACAAAATAAAGACATT+TGG + chr3_1:79264326-79264345 None:intergenic 20.0%
!!! CTTTATTTTGTTAGTTTTGT+AGG - chr3_1:79264331-79264350 Msa0378440:CDS 20.0%
!! TAATTAGCCCTTTATAATTA+TGG - chr3_1:79264395-79264414 Msa0378440:CDS 20.0%
!! AATTAGCCCTTTATAATTAT+GGG - chr3_1:79264396-79264415 Msa0378440:CDS 20.0%
!! TCTTACTTCATTGTTATATA+AGG + chr3_1:79264433-79264452 None:intergenic 20.0%
!!! AAACTAAATGCATTTTTGTA+TGG - chr3_1:79264466-79264485 Msa0378440:intron 20.0%
!!! AACTAAATGCATTTTTGTAT+GGG - chr3_1:79264467-79264486 Msa0378440:intron 20.0%
!! TTAATACAAAAAGGAAAATG+AGG + chr3_1:79264637-79264656 None:intergenic 20.0%
!!! TGTTTATATAATTTTTTCGG+TGG - chr3_1:79264812-79264831 Msa0378440:intron 20.0%
!! ATAAAACATGGTATGAAAAA+GGG + chr3_1:79265099-79265118 None:intergenic 20.0%
!! TATAAAACATGGTATGAAAA+AGG + chr3_1:79265100-79265119 None:intergenic 20.0%
!!! ATACCATGTTTTATACTTAT+AGG - chr3_1:79265105-79265124 Msa0378440:intron 20.0%
!!! GTCTTTTCATTTGATTATTT+TGG - chr3_1:79265444-79265463 Msa0378440:intron 20.0%
! TGAATTGTAATAGAGATATG+TGG - chr3_1:79259896-79259915 Msa0378440:three_prime_UTR 25.0%
! GAATTGTAATAGAGATATGT+GGG - chr3_1:79259897-79259916 Msa0378440:three_prime_UTR 25.0%
! AATTGTAATAGAGATATGTG+GGG - chr3_1:79259898-79259917 Msa0378440:three_prime_UTR 25.0%
! TACAGGTTTATTGATACATT+TGG - chr3_1:79259961-79259980 Msa0378440:three_prime_UTR 25.0%
! TAGAGATTATTATACATGGT+AGG + chr3_1:79260087-79260106 None:intergenic 25.0%
! GAATAACAACAACAAAAAAG+GGG + chr3_1:79260649-79260668 None:intergenic 25.0%
! GAGAATAACAACAACAAAAA+AGG + chr3_1:79260651-79260670 None:intergenic 25.0%
! TTTCAATTTGTGTGATTCAA+TGG - chr3_1:79260868-79260887 Msa0378440:intron 25.0%
! GTAAACTTGTACATAGTTAT+TGG + chr3_1:79260980-79260999 None:intergenic 25.0%
! AGAAAATTTGAGGAATCAAA+GGG + chr3_1:79261066-79261085 None:intergenic 25.0%
! AAGAAAATTTGAGGAATCAA+AGG + chr3_1:79261067-79261086 None:intergenic 25.0%
! ATTTAGCACAAGAAAATTTG+AGG + chr3_1:79261076-79261095 None:intergenic 25.0%
!! ATTATTTCTTGTCTGTTGTA+GGG - chr3_1:79261281-79261300 Msa0378440:intron 25.0%
! GTAAAGAGAAAATAAAACAC+AGG + chr3_1:79261329-79261348 None:intergenic 25.0%
! ACAACTAATAAATTCAACCA+TGG + chr3_1:79261791-79261810 None:intergenic 25.0%
!!! CTCATTATTTTGTATGATGA+TGG + chr3_1:79261847-79261866 None:intergenic 25.0%
! GCAAAATAATACTTCATCTT+TGG - chr3_1:79261906-79261925 Msa0378440:intron 25.0%
! TAGTTATCACTTATTTGTAG+AGG - chr3_1:79262251-79262270 Msa0378440:intron 25.0%
! AGTTATCACTTATTTGTAGA+GGG - chr3_1:79262252-79262271 Msa0378440:intron 25.0%
!!! TTTTTTTTGAATGGCCATTT+CGG - chr3_1:79262428-79262447 Msa0378440:intron 25.0%
! ATTATTGGGATCTATATTTC+TGG - chr3_1:79262460-79262479 Msa0378440:intron 25.0%
! ATAAATGAGAATGATTTGAG+GGG + chr3_1:79262668-79262687 None:intergenic 25.0%
! CATAAATGAGAATGATTTGA+GGG + chr3_1:79262669-79262688 None:intergenic 25.0%
! TCATAAATGAGAATGATTTG+AGG + chr3_1:79262670-79262689 None:intergenic 25.0%
! ATATTAACAATTAAGTACCC+AGG + chr3_1:79262750-79262769 None:intergenic 25.0%
!!! AGTTTTAGAAAAGAAGGTAA+AGG - chr3_1:79262927-79262946 Msa0378440:intron 25.0%
! TGGCAGTTAAAACAAAAATT+CGG + chr3_1:79263078-79263097 None:intergenic 25.0%
!!! AATGTATCAATGAAAGCATT+TGG + chr3_1:79263116-79263135 None:intergenic 25.0%
! CTGTTATAAAAAGAATCCTT+AGG + chr3_1:79263234-79263253 None:intergenic 25.0%
! CAATTCTAAATACTTAGCAA+TGG + chr3_1:79263696-79263715 None:intergenic 25.0%
! AATATTATTTGTTTCGCAGA+TGG - chr3_1:79263895-79263914 Msa0378440:intron 25.0%
! GAATTTATTGCATATGTTGA+AGG - chr3_1:79264010-79264029 Msa0378440:intron 25.0%
! ATATGTTGAAGGATATATTC+AGG - chr3_1:79264021-79264040 Msa0378440:intron 25.0%
!! ATTGGTCTATTGAATATTGA+TGG - chr3_1:79264248-79264267 Msa0378440:intron 25.0%
!! TTGACGTATTGGTAATAATT+TGG - chr3_1:79264292-79264311 Msa0378440:CDS 25.0%
! GCTAATTATAAAGTAGGAAT+GGG + chr3_1:79264383-79264402 None:intergenic 25.0%
! TAAAGGGCTAATTATAAAGT+AGG + chr3_1:79264389-79264408 None:intergenic 25.0%
! ATTAGCCCTTTATAATTATG+GGG - chr3_1:79264397-79264416 Msa0378440:CDS 25.0%
! ACTAAGTAAGGAAACTAAAA+AGG - chr3_1:79264515-79264534 Msa0378440:intron 25.0%
! CAAGTATAGTAAGAATTTCT+TGG + chr3_1:79264599-79264618 None:intergenic 25.0%
!! TTCCTTTTTGTATTAACCTT+TGG - chr3_1:79264641-79264660 Msa0378440:intron 25.0%
!! CACAATTATGCAAAAGTTTT+GGG - chr3_1:79264722-79264741 Msa0378440:intron 25.0%
! TTTAAATTTGAGGATCTCAA+TGG - chr3_1:79264980-79264999 Msa0378440:intron 25.0%
! GTTCCTATAAGTATAAAACA+TGG + chr3_1:79265111-79265130 None:intergenic 25.0%
! AATATTTGCTCAAACTGAAT+AGG - chr3_1:79265767-79265786 Msa0378440:intron 25.0%
! TACATCAGACTGAAAAAAAA+TGG + chr3_1:79265819-79265838 None:intergenic 25.0%
! CATAAAATTATCAAATGGCA+CGG - chr3_1:79265895-79265914 Msa0378440:CDS 25.0%
TAATTTATGAGGTGACAGAA+TGG - chr3_1:79259835-79259854 Msa0378440:three_prime_UTR 30.0%
!! ACAGGTTTGTTAGTTAGTTA+GGG + chr3_1:79259874-79259893 None:intergenic 30.0%
!! AACAGGTTTGTTAGTTAGTT+AGG + chr3_1:79259875-79259894 None:intergenic 30.0%
TCTCTATTACAATTCACAAC+AGG + chr3_1:79259892-79259911 None:intergenic 30.0%
ATTCAATTGTATAGTGGTAC+AGG - chr3_1:79259944-79259963 Msa0378440:three_prime_UTR 30.0%
TTATTATACATGGTAGGAGA+GGG + chr3_1:79260081-79260100 None:intergenic 30.0%
ATTATTATACATGGTAGGAG+AGG + chr3_1:79260082-79260101 None:intergenic 30.0%
GTATCAGATGTAACAAAGAT+AGG + chr3_1:79260560-79260579 None:intergenic 30.0%
!!! AGTGTTTTGGAAGCTAAATA+TGG - chr3_1:79260892-79260911 Msa0378440:intron 30.0%
! TTTAGCTCAAACGAATAACT+TGG - chr3_1:79260918-79260937 Msa0378440:CDS 30.0%
TTAGCTCAAACGAATAACTT+GGG - chr3_1:79260919-79260938 Msa0378440:CDS 30.0%
!! TGTACATAGTTATTGGTTCA+AGG + chr3_1:79260973-79260992 None:intergenic 30.0%
CGACAAATAACATGAAACAA+AGG + chr3_1:79261129-79261148 None:intergenic 30.0%
AACTGAAAGAAATAGATGTG+TGG - chr3_1:79261165-79261184 Msa0378440:CDS 30.0%
! CTAGATTAGTTGACAGATAA+AGG + chr3_1:79261210-79261229 None:intergenic 30.0%
CAACAGACAAGAAATAATCA+TGG + chr3_1:79261279-79261298 None:intergenic 30.0%
! GATTATTTCTTGTCTGTTGT+AGG - chr3_1:79261280-79261299 Msa0378440:intron 30.0%
AACTGATGATAGGTAAATTC+AGG - chr3_1:79261495-79261514 Msa0378440:intron 30.0%
! ACATTTGGTGATATCCAATA+TGG + chr3_1:79261555-79261574 None:intergenic 30.0%
TATGGCATCATAAAGACATT+TGG + chr3_1:79261570-79261589 None:intergenic 30.0%
AATTTGTATGGTATGCATAG+AGG + chr3_1:79261696-79261715 None:intergenic 30.0%
CTATGCATACCATACAAATT+TGG - chr3_1:79261696-79261715 Msa0378440:intron 30.0%
TAAGCAGTACCAAATTTGTA+TGG + chr3_1:79261708-79261727 None:intergenic 30.0%
AAAATAGAGGTAAATGCAAG+CGG - chr3_1:79261867-79261886 Msa0378440:intron 30.0%
! AAAACTGCCATTTATCACTA+AGG - chr3_1:79261946-79261965 Msa0378440:intron 30.0%
TAGAGATAAACACATTGAAG+TGG - chr3_1:79262066-79262085 Msa0378440:intron 30.0%
TTATTTGTAGAGGGAAATCA+AGG - chr3_1:79262261-79262280 Msa0378440:intron 30.0%
AAGCCAAATCATTTAGAGAA+AGG - chr3_1:79262292-79262311 Msa0378440:intron 30.0%
GTACCTTTCTCTAAATGATT+TGG + chr3_1:79262298-79262317 None:intergenic 30.0%
GATATTAGGATAGGACATAT+TGG - chr3_1:79262347-79262366 Msa0378440:intron 30.0%
GAATTATCAAATGAGTGCTT+TGG - chr3_1:79262595-79262614 Msa0378440:CDS 30.0%
! ATTTCAGTGACATACTTTTG+AGG - chr3_1:79262879-79262898 Msa0378440:intron 30.0%
!!! CTGCTAAGTTTTAGAAAAGA+AGG - chr3_1:79262921-79262940 Msa0378440:intron 30.0%
TGCAATATGAAGGGAAAATA+TGG + chr3_1:79263049-79263068 None:intergenic 30.0%
ATGCTTTCATTGATACATTG+AGG - chr3_1:79263117-79263136 Msa0378440:intron 30.0%
TGCTTTCATTGATACATTGA+GGG - chr3_1:79263118-79263137 Msa0378440:intron 30.0%
!! TGTAGCTTTATGTATTTCCA+GGG - chr3_1:79263267-79263286 Msa0378440:intron 30.0%
!!! GCTTTTTTCTCTTTCTGTTA+CGG - chr3_1:79263420-79263439 Msa0378440:intron 30.0%
! CATTTCATATGTATCGATCA+AGG + chr3_1:79263488-79263507 None:intergenic 30.0%
GATACATATGAAATGCACTT+TGG - chr3_1:79263493-79263512 Msa0378440:intron 30.0%
CAGAACAATATATAAGGCAA+AGG + chr3_1:79263529-79263548 None:intergenic 30.0%
TTGCCTTATATATTGTTCTG+TGG - chr3_1:79263529-79263548 Msa0378440:intron 30.0%
GATCCACAGAACAATATATA+AGG + chr3_1:79263535-79263554 None:intergenic 30.0%
!!! GTTTTCTGAAGTAACATTAC+TGG - chr3_1:79263646-79263665 Msa0378440:intron 30.0%
!! TATGATGCATGTCTGTTTTT+AGG - chr3_1:79264052-79264071 Msa0378440:intron 30.0%
!! TTTTAGGTGATAACTAGACA+TGG - chr3_1:79264068-79264087 Msa0378440:intron 30.0%
ATAACTAGACATGGAAAAAG+AGG - chr3_1:79264077-79264096 Msa0378440:intron 30.0%
TAACTAGACATGGAAAAAGA+GGG - chr3_1:79264078-79264097 Msa0378440:intron 30.0%
GTCAATCGTTCAAATATAGT+AGG + chr3_1:79264277-79264296 None:intergenic 30.0%
TATTTGAACGATTGACGTAT+TGG - chr3_1:79264281-79264300 Msa0378440:CDS 30.0%
GGCTAATTATAAAGTAGGAA+TGG + chr3_1:79264384-79264403 None:intergenic 30.0%
GACCAAAGGTTAATACAAAA+AGG + chr3_1:79264646-79264665 None:intergenic 30.0%
! GCACAATTATGCAAAAGTTT+TGG - chr3_1:79264721-79264740 Msa0378440:intron 30.0%
ACATCTTGCATATAAATCCT+AGG - chr3_1:79265060-79265079 Msa0378440:intron 30.0%
TGAAAAAGGGAAAAATTACG+AGG + chr3_1:79265086-79265105 None:intergenic 30.0%
! TTTTCCTCTGCAATTTTTGT+AGG - chr3_1:79265140-79265159 Msa0378440:intron 30.0%
!! ATTCAGTTTTGTCTGCATTT+TGG - chr3_1:79265260-79265279 Msa0378440:intron 30.0%
TCATCATCTTCATACTAGAA+TGG + chr3_1:79265327-79265346 None:intergenic 30.0%
ATTCTAGTATGAAGATGATG+AGG - chr3_1:79265326-79265345 Msa0378440:CDS 30.0%
TTCTAGTATGAAGATGATGA+GGG - chr3_1:79265327-79265346 Msa0378440:CDS 30.0%
!!! TTTGATTATTTTGGCTTCCT+TGG - chr3_1:79265453-79265472 Msa0378440:intron 30.0%
!!! TTGATTATTTTGGCTTCCTT+GGG - chr3_1:79265454-79265473 Msa0378440:intron 30.0%
!! TCAGGCTCTAAAATTGAATT+TGG - chr3_1:79265523-79265542 Msa0378440:intron 30.0%
!!! ATCAGTGTTTGGTTTTAGTT+TGG + chr3_1:79265564-79265583 None:intergenic 30.0%
TCTAACAAGCATCAGTATAT+TGG - chr3_1:79265649-79265668 Msa0378440:CDS 30.0%
TACATGTTGATATAAAGTCG+TGG - chr3_1:79265872-79265891 Msa0378440:CDS 30.0%
CGTGGCATAAAATTATCAAA+TGG - chr3_1:79265890-79265909 Msa0378440:CDS 30.0%
TCGTATTGTTCAGTTCATAT+TGG - chr3_1:79265945-79265964 Msa0378440:five_prime_UTR 30.0%
CGTATTGTTCAGTTCATATT+GGG - chr3_1:79265946-79265965 Msa0378440:five_prime_UTR 30.0%
TAATAGAGATATGTGGGGTA+GGG - chr3_1:79259903-79259922 Msa0378440:three_prime_UTR 35.0%
! AGGTTTTCCGTTTCCATTTT+CGG + chr3_1:79260058-79260077 None:intergenic 35.0%
!! TTAATTTGTTACAGGGGAGA+TGG - chr3_1:79260209-79260228 Msa0378440:exon 35.0%
ACTGGAATCAGTTAAGAGAA+CGG + chr3_1:79260342-79260361 None:intergenic 35.0%
TTTGCATACGTTTCTGATTC+AGG - chr3_1:79260460-79260479 Msa0378440:intron 35.0%
!!! CATCTTTTGAAGAGCATCAA+TGG + chr3_1:79260588-79260607 None:intergenic 35.0%
TGCTCTTCAAAAGATGATTC+AGG - chr3_1:79260592-79260611 Msa0378440:intron 35.0%
GCTCTTCAAAAGATGATTCA+GGG - chr3_1:79260593-79260612 Msa0378440:intron 35.0%
!!! CTTTTTTTGTACCGTTGTCT+TGG - chr3_1:79260696-79260715 Msa0378440:CDS 35.0%
ATGGAGATTATTTGCAGGTT+AGG - chr3_1:79260802-79260821 Msa0378440:intron 35.0%
TGGAGATTATTTGCAGGTTA+GGG - chr3_1:79260803-79260822 Msa0378440:intron 35.0%
!!! GTGATTCAATGGAAGTGTTT+TGG - chr3_1:79260879-79260898 Msa0378440:intron 35.0%
TAGCTCAAACGAATAACTTG+GGG - chr3_1:79260920-79260939 Msa0378440:CDS 35.0%
!! TATTTCTTTCAGTTCTGAGC+TGG + chr3_1:79261159-79261178 None:intergenic 35.0%
GGCAGAAACAAAGTTAAGAT+AGG + chr3_1:79261308-79261327 None:intergenic 35.0%
ACTGGTTAAAGAAGCAGAAA+AGG + chr3_1:79261351-79261370 None:intergenic 35.0%
TCAATTCAAGCATCATCAAC+TGG + chr3_1:79261369-79261388 None:intergenic 35.0%
TACTTAATGGAGTCATAGTC+TGG - chr3_1:79261427-79261446 Msa0378440:intron 35.0%
TCTTTATGATGCCATAGCTA+GGG - chr3_1:79261574-79261593 Msa0378440:intron 35.0%
GTATATGCTTATAACAGCCA+TGG - chr3_1:79261771-79261790 Msa0378440:intron 35.0%
TGTTGTATGAGATCGAATGT+TGG - chr3_1:79262001-79262020 Msa0378440:intron 35.0%
GTTGTATGAGATCGAATGTT+GGG - chr3_1:79262002-79262021 Msa0378440:intron 35.0%
!!! GAAATTTTTTCCCACTTGGT+GGG + chr3_1:79262397-79262416 None:intergenic 35.0%
CACCAAGTGGGAAAAAATTT+CGG - chr3_1:79262396-79262415 Msa0378440:intron 35.0%
!!! AACCGAAATTTTTTCCCACT+TGG + chr3_1:79262401-79262420 None:intergenic 35.0%
TGGAAGGAAATAATGCACAA+AGG - chr3_1:79262546-79262565 Msa0378440:CDS 35.0%
! AAATTTGATGGTCTAAGTGC+TGG - chr3_1:79262834-79262853 Msa0378440:intron 35.0%
TAGAAAAGAAGGTAAAGGAC+TGG - chr3_1:79262932-79262951 Msa0378440:intron 35.0%
! TATGAGAAGCCACAAGTTTT+TGG + chr3_1:79263000-79263019 None:intergenic 35.0%
GTGTATTTATGCATTGCCTA+AGG - chr3_1:79263215-79263234 Msa0378440:intron 35.0%
!! CTGTAGCTTTATGTATTTCC+AGG - chr3_1:79263266-79263285 Msa0378440:intron 35.0%
TGTAACAGAAAGCAAGATTC+AGG - chr3_1:79263369-79263388 Msa0378440:intron 35.0%
GTAACAGAAAGCAAGATTCA+GGG - chr3_1:79263370-79263389 Msa0378440:intron 35.0%
TAACAGAAAGCAAGATTCAG+GGG - chr3_1:79263371-79263390 Msa0378440:intron 35.0%
AGAGAAAAAAGCCTCAGAAA+GGG + chr3_1:79263412-79263431 None:intergenic 35.0%
AAGAGAAAAAAGCCTCAGAA+AGG + chr3_1:79263413-79263432 None:intergenic 35.0%
AGACATTCTTATGCGTGTTA+TGG - chr3_1:79263571-79263590 Msa0378440:intron 35.0%
TCTCTAATGTTGCACATTGT+GGG + chr3_1:79263755-79263774 None:intergenic 35.0%
AATTATAGAAGCGGTTGAGA+AGG + chr3_1:79263857-79263876 None:intergenic 35.0%
GAAGGATATATTCAGGAATC+TGG - chr3_1:79264028-79264047 Msa0378440:intron 35.0%
AACTAGACATGGAAAAAGAG+GGG - chr3_1:79264079-79264098 Msa0378440:intron 35.0%
CCAATAATCTCAAGTCTAAG+AGG + chr3_1:79264233-79264252 None:intergenic 35.0%
CCTCTTAGACTTGAGATTAT+TGG - chr3_1:79264230-79264249 Msa0378440:intron 35.0%
AGACGCCCCATAATTATAAA+GGG + chr3_1:79264405-79264424 None:intergenic 35.0%
AAGACGCCCCATAATTATAA+AGG + chr3_1:79264406-79264425 None:intergenic 35.0%
! GGAAAATGAGGCATTAGTTA+AGG + chr3_1:79264625-79264644 None:intergenic 35.0%
TTCCGGAAATGTTAATGATG+TGG - chr3_1:79264695-79264714 Msa0378440:intron 35.0%
TGCCACATCATTAACATTTC+CGG + chr3_1:79264700-79264719 None:intergenic 35.0%
AGATTGATATGTGGACTTTG+TGG + chr3_1:79264936-79264955 None:intergenic 35.0%
AAAACCTGCAGATTGATATG+TGG + chr3_1:79264945-79264964 None:intergenic 35.0%
! ACATATCAATCTGCAGGTTT+TGG - chr3_1:79264944-79264963 Msa0378440:intron 35.0%
AGAACCTACAAAAATTGCAG+AGG + chr3_1:79265147-79265166 None:intergenic 35.0%
TCAGCTGTTATGCAAAGAAT+TGG - chr3_1:79265188-79265207 Msa0378440:intron 35.0%
AGAATTGGTCCTGTTAATGA+TGG - chr3_1:79265203-79265222 Msa0378440:intron 35.0%
AGCAAGCATCTTTGTATTTC+AGG - chr3_1:79265505-79265524 Msa0378440:intron 35.0%
TTAGTGGCTATATCAGTGTT+TGG + chr3_1:79265575-79265594 None:intergenic 35.0%
!!! TATACTGGTTTTCTGCTTAG+TGG + chr3_1:79265591-79265610 None:intergenic 35.0%
TTTGTAGAGAGGAGATTACT+CGG + chr3_1:79265848-79265867 None:intergenic 35.0%
ACATGTACTCATTTGTAGAG+AGG + chr3_1:79265859-79265878 None:intergenic 35.0%
GTAATAGAGATATGTGGGGT+AGG - chr3_1:79259902-79259921 Msa0378440:three_prime_UTR 40.0%
! TTTTCCGTTTCCATTTTCGG+CGG + chr3_1:79260055-79260074 None:intergenic 40.0%
GAAGAAGGTGAAATTGTCGA+AGG - chr3_1:79260247-79260266 Msa0378440:CDS 40.0%
TTAAGAGAACGGCATCAACA+CGG + chr3_1:79260331-79260350 None:intergenic 40.0%
! AATTCCAGAAAGAAGAGCAC+TGG + chr3_1:79260360-79260379 None:intergenic 40.0%
!! TTCTGGAATTCTCACTGACA+AGG - chr3_1:79260370-79260389 Msa0378440:CDS 40.0%
AGGATTGCGTGTCATAACTT+TGG + chr3_1:79260540-79260559 None:intergenic 40.0%
ATTTCCTACGGTTTAGATCC+TGG - chr3_1:79260778-79260797 Msa0378440:intron 40.0%
CTGCAAATAATCTCCATTCC+AGG + chr3_1:79260799-79260818 None:intergenic 40.0%
CTGGAATGGAGATTATTTGC+AGG - chr3_1:79260797-79260816 Msa0378440:intron 40.0%
TGTCACATTCTGACATCTAC+TGG - chr3_1:79260841-79260860 Msa0378440:intron 40.0%
TTGAGGAATCAAAGGGTGAA+AGG + chr3_1:79261059-79261078 None:intergenic 40.0%
GTCTTTATGATGCCATAGCT+AGG - chr3_1:79261573-79261592 Msa0378440:intron 40.0%
GAATTGCTTCTACTTGCATG+TGG - chr3_1:79261741-79261760 Msa0378440:intron 40.0%
GGTAAATGCAAGCGGTATAA+AGG - chr3_1:79261875-79261894 Msa0378440:intron 40.0%
AAATGCAAGCGGTATAAAGG+TGG - chr3_1:79261878-79261897 Msa0378440:intron 40.0%
TATGAGATCGAATGTTGGGT+TGG - chr3_1:79262006-79262025 Msa0378440:intron 40.0%
ATGAGATCGAATGTTGGGTT+GGG - chr3_1:79262007-79262026 Msa0378440:intron 40.0%
AACACATTGAAGTGGATGAG+CGG - chr3_1:79262074-79262093 Msa0378440:intron 40.0%
CTCTACAATGATTTCGCAGT+AGG + chr3_1:79262159-79262178 None:intergenic 40.0%
CTACTGCGAAATCATTGTAG+AGG - chr3_1:79262157-79262176 Msa0378440:CDS 40.0%
AGGCCTGTTTCAGATGATTA+GGG - chr3_1:79262177-79262196 Msa0378440:intron 40.0%
! AAGCCCTAATCATCTGAAAC+AGG + chr3_1:79262183-79262202 None:intergenic 40.0%
ACCATTTGAACCTCCAGTAA+GGG - chr3_1:79262213-79262232 Msa0378440:intron 40.0%
!!! CGAAATTTTTTCCCACTTGG+TGG + chr3_1:79262398-79262417 None:intergenic 40.0%
GAATGATTTGAGGGGTGAAA+GGG + chr3_1:79262660-79262679 None:intergenic 40.0%
AGAATGATTTGAGGGGTGAA+AGG + chr3_1:79262661-79262680 None:intergenic 40.0%
! GTTTTGCAGCCAAAAACTTG+TGG - chr3_1:79262988-79263007 Msa0378440:intron 40.0%
CGGCATCATTGCAATATGAA+GGG + chr3_1:79263058-79263077 None:intergenic 40.0%
TCGGCATCATTGCAATATGA+AGG + chr3_1:79263059-79263078 None:intergenic 40.0%
! TTTGGAGCTGACAAAAGTAG+TGG + chr3_1:79263098-79263117 None:intergenic 40.0%
CCTTCCTTGTCAACTATACT+CGG - chr3_1:79263155-79263174 Msa0378440:intron 40.0%
TTCACCGAGTATAGTTGACA+AGG + chr3_1:79263162-79263181 None:intergenic 40.0%
! TTCCAGGGTTGCTATTACAT+CGG - chr3_1:79263282-79263301 Msa0378440:intron 40.0%
! GCATTCTTTTTGCAGCTACA+TGG + chr3_1:79263321-79263340 None:intergenic 40.0%
TGACGTAAAATCCCTTTCTG+AGG - chr3_1:79263398-79263417 Msa0378440:intron 40.0%
! CACAACAACCTTTTCCACTA+GGG + chr3_1:79263621-79263640 None:intergenic 40.0%
AATGTTGCACATTGTGGGTT+TGG + chr3_1:79263750-79263769 None:intergenic 40.0%
GTCTCTAATGTTGCACATTG+TGG + chr3_1:79263756-79263775 None:intergenic 40.0%
CTCTGCATATGATGCATGAT+GGG - chr3_1:79263790-79263809 Msa0378440:intron 40.0%
AACTCATGCTGCAATTTCTC+TGG - chr3_1:79263951-79263970 Msa0378440:intron 40.0%
! GAATGAAGTGATTGGTGGTT+CGG + chr3_1:79264361-79264380 None:intergenic 40.0%
AATGGGAATGAAGTGATTGG+TGG + chr3_1:79264366-79264385 None:intergenic 40.0%
AGGAATGGGAATGAAGTGAT+TGG + chr3_1:79264369-79264388 None:intergenic 40.0%
TACAGAGTACATAGGACCAA+AGG + chr3_1:79264660-79264679 None:intergenic 40.0%
TTTGGTCCTATGTACTCTGT+AGG - chr3_1:79264659-79264678 Msa0378440:intron 40.0%
TTTCGACCTACAGAGTACAT+AGG + chr3_1:79264668-79264687 None:intergenic 40.0%
TTAGTGTCGTAATCTTCAGG+AGG + chr3_1:79264768-79264787 None:intergenic 40.0%
CTGTTAGTGTCGTAATCTTC+AGG + chr3_1:79264771-79264790 None:intergenic 40.0%
CTGAAGATTACGACACTAAC+AGG - chr3_1:79264769-79264788 Msa0378440:intron 40.0%
TACGACACTAACAGGTACTT+CGG - chr3_1:79264777-79264796 Msa0378440:intron 40.0%
! TTTTGTTGCAGTGAAGTCTC+TGG - chr3_1:79264884-79264903 Msa0378440:intron 40.0%
AAGTCCACATATCAATCTGC+AGG - chr3_1:79264938-79264957 Msa0378440:intron 40.0%
! CTCTGGTGAGTAGACATTTT+GGG - chr3_1:79265021-79265040 Msa0378440:intron 40.0%
! TCTGGTGAGTAGACATTTTG+GGG - chr3_1:79265022-79265041 Msa0378440:intron 40.0%
!!! TATTTTGGCTTCCTTGGGTT+TGG - chr3_1:79265459-79265478 Msa0378440:intron 40.0%
CTGGCAAACATATCACTGAT+TGG + chr3_1:79265690-79265709 None:intergenic 40.0%
CAGTGATATGTTTGCCAGTT+TGG - chr3_1:79265692-79265711 Msa0378440:intron 40.0%
TGCATGTTCTGTTTCCAAAC+TGG + chr3_1:79265709-79265728 None:intergenic 40.0%
! TGGGATATCTGCAACTTTTC+CGG - chr3_1:79265965-79265984 Msa0378440:five_prime_UTR 40.0%
TTATACATGGTAGGAGAGGG+AGG + chr3_1:79260078-79260097 None:intergenic 45.0%
! ATTTGTTACAGGGGAGATGG+AGG - chr3_1:79260212-79260231 Msa0378440:exon 45.0%
AGGAGAAAGAACGGTGAAGA+AGG - chr3_1:79260232-79260251 Msa0378440:CDS 45.0%
! TCGTCTACATGCATCGGTAA+CGG + chr3_1:79260297-79260316 None:intergenic 45.0%
TACCGATGCATGTAGACGAA+TGG - chr3_1:79260298-79260317 Msa0378440:CDS 45.0%
GATTCCAGTGCTCTTCTTTC+TGG - chr3_1:79260353-79260372 Msa0378440:CDS 45.0%
GGATGTTGCTACTAGAGTTG+TGG - chr3_1:79260481-79260500 Msa0378440:intron 45.0%
TTGGAGACATGTGTCTCATC+CGG + chr3_1:79260521-79260540 None:intergenic 45.0%
!! TTGAAGAGCATCAATGGCGA+GGG + chr3_1:79260582-79260601 None:intergenic 45.0%
!! TTTGAAGAGCATCAATGGCG+AGG + chr3_1:79260583-79260602 None:intergenic 45.0%
TACAACGCTCACCAAGACAA+CGG + chr3_1:79260710-79260729 None:intergenic 45.0%
CATTCCAGGATCTAAACCGT+AGG + chr3_1:79260785-79260804 None:intergenic 45.0%
CTACGGTTTAGATCCTGGAA+TGG - chr3_1:79260783-79260802 Msa0378440:intron 45.0%
AAAGTTGTCTCCCAACTCGA+AGG + chr3_1:79260946-79260965 None:intergenic 45.0%
!! TTCTTTCAGTTCTGAGCTGG+AGG + chr3_1:79261156-79261175 None:intergenic 45.0%
! GGAGTTATTTCCAGCAAGCA+GGG - chr3_1:79261253-79261272 Msa0378440:intron 45.0%
! CTTCACCGTTTTCCACAACT+GGG + chr3_1:79261526-79261545 None:intergenic 45.0%
! ACTTCACCGTTTTCCACAAC+TGG + chr3_1:79261527-79261546 None:intergenic 45.0%
CGGTGAAGTCATTGCCATAT+TGG - chr3_1:79261538-79261557 Msa0378440:intron 45.0%
TTATGATGCCATAGCTAGGG+TGG - chr3_1:79261577-79261596 Msa0378440:intron 45.0%
GAGGCCTGTTTCAGATGATT+AGG - chr3_1:79262176-79262195 Msa0378440:intron 45.0%
GACCATTTGAACCTCCAGTA+AGG - chr3_1:79262212-79262231 Msa0378440:intron 45.0%
ACCCTTACTGGAGGTTCAAA+TGG + chr3_1:79262217-79262236 None:intergenic 45.0%
ATACCATCTACGACCCTTAC+TGG + chr3_1:79262229-79262248 None:intergenic 45.0%
TTGTAGTCAATCCCACCAAG+TGG - chr3_1:79262383-79262402 Msa0378440:intron 45.0%
TGTAGTCAATCCCACCAAGT+GGG - chr3_1:79262384-79262403 Msa0378440:intron 45.0%
CCGAGTATAGTTGACAAGGA+AGG + chr3_1:79263158-79263177 None:intergenic 45.0%
! CTTTTTGCAGCTACATGGAC+AGG + chr3_1:79263316-79263335 None:intergenic 45.0%
! GTCGACTCTGGTGAAAGATT+TGG + chr3_1:79263599-79263618 None:intergenic 45.0%
! CCACAACAACCTTTTCCACT+AGG + chr3_1:79263622-79263641 None:intergenic 45.0%
CCTAGTGGAAAAGGTTGTTG+TGG - chr3_1:79263619-79263638 Msa0378440:intron 45.0%
GCTCTGCATATGATGCATGA+TGG - chr3_1:79263789-79263808 Msa0378440:intron 45.0%
AGTTTACCTTTGTCCACCAC+AGG + chr3_1:79263831-79263850 None:intergenic 45.0%
TGGAAATGTCGTTGCTTGTG+TGG - chr3_1:79263915-79263934 Msa0378440:intron 45.0%
TTTCCTTACTTAGTGCCCCA+GGG + chr3_1:79264509-79264528 None:intergenic 45.0%
TAGGTCGAAAGTAGCTCTTC+CGG - chr3_1:79264678-79264697 Msa0378440:intron 45.0%
! AGTCTCTGGACAACTGACTT+TGG - chr3_1:79264898-79264917 Msa0378440:intron 45.0%
! TCTGGACAACTGACTTTGGA+TGG - chr3_1:79264902-79264921 Msa0378440:intron 45.0%
! CTGGACAACTGACTTTGGAT+GGG - chr3_1:79264903-79264922 Msa0378440:intron 45.0%
! TGGACAACTGACTTTGGATG+GGG - chr3_1:79264904-79264923 Msa0378440:intron 45.0%
CCAAAATGTCTACTCACCAG+AGG + chr3_1:79265023-79265042 None:intergenic 45.0%
! CCTCTGGTGAGTAGACATTT+TGG - chr3_1:79265020-79265039 Msa0378440:intron 45.0%
AGGGAAAAATTACGAGGCCT+AGG + chr3_1:79265080-79265099 None:intergenic 45.0%
! TTAATGATGGAGAACGCCCT+AGG - chr3_1:79265216-79265235 Msa0378440:intron 45.0%
TAAAACACACCAGCAGCCTA+GGG + chr3_1:79265235-79265254 None:intergenic 45.0%
ATAAAACACACCAGCAGCCT+AGG + chr3_1:79265236-79265255 None:intergenic 45.0%
ATGCATCATAGCCAAACCCA+AGG + chr3_1:79265473-79265492 None:intergenic 45.0%
CACCTGCAAAAATTCCAGAG+CGG + chr3_1:79265622-79265641 None:intergenic 45.0%
! ACTTTTCCGGCTGTGGTATA+CGG - chr3_1:79265978-79265997 Msa0378440:five_prime_UTR 45.0%
GGGAGATGGAGGAGAAAGAA+CGG - chr3_1:79260223-79260242 Msa0378440:exon 50.0%
! ATCGGTAACGGTTGTCCCAT+CGG + chr3_1:79260285-79260304 None:intergenic 50.0%
GGCCATTCGTCTACATGCAT+CGG + chr3_1:79260303-79260322 None:intergenic 50.0%
TGCTACTAGAGTTGTGGCTG+AGG - chr3_1:79260487-79260506 Msa0378440:intron 50.0%
GCTACTAGAGTTGTGGCTGA+GGG - chr3_1:79260488-79260507 Msa0378440:intron 50.0%
ATAACTTGGGGCCTTCGAGT+TGG - chr3_1:79260932-79260951 Msa0378440:CDS 50.0%
! TAACTTGGGGCCTTCGAGTT+GGG - chr3_1:79260933-79260952 Msa0378440:CDS 50.0%
! GGGAGTTATTTCCAGCAAGC+AGG - chr3_1:79261252-79261271 Msa0378440:intron 50.0%
ATAATCATGGCCCTGCTTGC+TGG + chr3_1:79261266-79261285 None:intergenic 50.0%
CACCTCCCAGTTGTGGAAAA+CGG - chr3_1:79261518-79261537 Msa0378440:intron 50.0%
TGGAGAAGGCTTCTCAGCAA+GGG - chr3_1:79261597-79261616 Msa0378440:intron 50.0%
ATTGCTGCTGCTGCAGTTGA+GGG - chr3_1:79261626-79261645 Msa0378440:intron 50.0%
CGGACACATAAGTACACTGC+AGG - chr3_1:79262094-79262113 Msa0378440:CDS 50.0%
TGCATGAGCAGTCAATCACC+TGG - chr3_1:79262729-79262748 Msa0378440:intron 50.0%
GCATGAGCAGTCAATCACCT+GGG - chr3_1:79262730-79262749 Msa0378440:intron 50.0%
TGCCGATGTAATAGCAACCC+TGG + chr3_1:79263287-79263306 None:intergenic 50.0%
!! TTTTCCACTAGGGTCGACTC+TGG + chr3_1:79263611-79263630 None:intergenic 50.0%
AGAGTCGACCCTAGTGGAAA+AGG - chr3_1:79263610-79263629 Msa0378440:intron 50.0%
!! CATCTTCCTGTGGTGGACAA+AGG - chr3_1:79263822-79263841 Msa0378440:intron 50.0%
TCATGCTAACTAGTGCCCCT+GGG - chr3_1:79264490-79264509 Msa0378440:intron 50.0%
TTCCTTACTTAGTGCCCCAG+GGG + chr3_1:79264508-79264527 None:intergenic 50.0%
GTTTCCTTACTTAGTGCCCC+AGG + chr3_1:79264510-79264529 None:intergenic 50.0%
CAGAGGTAAAGCGATGCACT+TGG + chr3_1:79265006-79265025 None:intergenic 50.0%
CAAGTGCATCGCTTTACCTC+TGG - chr3_1:79265004-79265023 Msa0378440:intron 50.0%
GGGCGTTCTCCATCATTAAC+AGG + chr3_1:79265215-79265234 None:intergenic 50.0%
GTCAGCTATGCTAGATCTGC+AGG - chr3_1:79265393-79265412 Msa0378440:CDS 50.0%
TGCTAGATCTGCAGGACTGA+AGG - chr3_1:79265401-79265420 Msa0378440:CDS 50.0%
AGAGCGGAGAGACACTATAC+TGG + chr3_1:79265606-79265625 None:intergenic 50.0%
AGTATAGTGTCTCTCCGCTC+TGG - chr3_1:79265605-79265624 Msa0378440:CDS 50.0%
!!! CTCCGCTCTGGAATTTTTGC+AGG - chr3_1:79265617-79265636 Msa0378440:CDS 50.0%
! ATCTGCAACTTTTCCGGCTG+TGG - chr3_1:79265971-79265990 Msa0378440:five_prime_UTR 50.0%
ACATCACCGTATACCACAGC+CGG + chr3_1:79265987-79266006 None:intergenic 50.0%
AAATCCCACGCCGCCGAAAA+TGG - chr3_1:79260042-79260061 Msa0378440:three_prime_UTR 55.0%
! GTTTCCATTTTCGGCGGCGT+GGG + chr3_1:79260049-79260068 None:intergenic 55.0%
CACGCCGCCGAAAATGGAAA+CGG - chr3_1:79260048-79260067 Msa0378440:three_prime_UTR 55.0%
! TCGGTAACGGTTGTCCCATC+GGG + chr3_1:79260284-79260303 None:intergenic 55.0%
TGTGGCTGAGGGATTGTCAC+CGG - chr3_1:79260499-79260518 Msa0378440:intron 55.0%
ATTCAGGCACCTCCCAGTTG+TGG - chr3_1:79261511-79261530 Msa0378440:intron 55.0%
! CACCGTTTTCCACAACTGGG+AGG + chr3_1:79261523-79261542 None:intergenic 55.0%
TGCCATAGCTAGGGTGGAGA+AGG - chr3_1:79261583-79261602 Msa0378440:intron 55.0%
AGCCTTCTCCACCCTAGCTA+TGG + chr3_1:79261588-79261607 None:intergenic 55.0%
GTGGAGAAGGCTTCTCAGCA+AGG - chr3_1:79261596-79261615 Msa0378440:intron 55.0%
CTCAACTGCAGCAGCAGCAA+TGG + chr3_1:79261627-79261646 None:intergenic 55.0%
CATTGCTGCTGCTGCAGTTG+AGG - chr3_1:79261625-79261644 Msa0378440:intron 55.0%
TTGCTGCTGCTGCAGTTGAG+GGG - chr3_1:79261627-79261646 Msa0378440:intron 55.0%
CCATCTACGACCCTTACTGG+AGG + chr3_1:79262226-79262245 None:intergenic 55.0%
CCTCCAGTAAGGGTCGTAGA+TGG - chr3_1:79262223-79262242 Msa0378440:intron 55.0%
TTCACCAGAGTCGACCCTAG+TGG - chr3_1:79263604-79263623 Msa0378440:intron 55.0%
GTCATGCTAACTAGTGCCCC+TGG - chr3_1:79264489-79264508 Msa0378440:intron 55.0%
CATGCTAACTAGTGCCCCTG+GGG - chr3_1:79264491-79264510 Msa0378440:intron 55.0%
GCGGCGTGGGATTTCTTGGA+AGG + chr3_1:79260036-79260055 None:intergenic 60.0%
TTCGGCGGCGTGGGATTTCT+TGG + chr3_1:79260040-79260059 None:intergenic 60.0%
! CGTTTCCATTTTCGGCGGCG+TGG + chr3_1:79260050-79260069 None:intergenic 60.0%
AAGGCTCTCACCATCCCCGA+TGG - chr3_1:79260266-79260285 Msa0378440:CDS 60.0%
AGGCTCTCACCATCCCCGAT+GGG - chr3_1:79260267-79260286 Msa0378440:CDS 60.0%
AACGGTTGTCCCATCGGGGA+TGG + chr3_1:79260279-79260298 None:intergenic 60.0%
! CGGTAACGGTTGTCCCATCG+GGG + chr3_1:79260283-79260302 None:intergenic 60.0%
AACGGCATCAACACGGCGAG+CGG + chr3_1:79260324-79260343 None:intergenic 60.0%
TGCTGCTGCTGCAGTTGAGG+GGG - chr3_1:79261628-79261647 Msa0378440:intron 60.0%
GAGGGGGTGGAAAATCAGCG+AGG - chr3_1:79261644-79261663 Msa0378440:intron 60.0%
! TGCCCCTGGGGCACTAAGTA+AGG - chr3_1:79264503-79264522 Msa0378440:intron 60.0%
TGCTGCTGCAGTTGAGGGGG+TGG - chr3_1:79261631-79261650 Msa0378440:intron 65.0%
TGGAGAACGCCCTAGGCTGC+TGG - chr3_1:79265223-79265242 Msa0378440:intron 65.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 79259820 79266105 79259820 ID=Msa0378440;Name=Msa0378440
chr3_1 mRNA 79259820 79266105 79259820 ID=Msa0378440-mRNA-1;Parent=Msa0378440;Name=Msa0378440-mRNA-1;_AED=0.11;_eAED=0.11;_QI=189|0.92|0.92|1|1|1|14|408|498
chr3_1 exon 79259820 79260398 79259820 ID=Msa0378440-mRNA-1:exon:19398;Parent=Msa0378440-mRNA-1
chr3_1 exon 79260503 79260592 79260503 ID=Msa0378440-mRNA-1:exon:19397;Parent=Msa0378440-mRNA-1
chr3_1 exon 79260681 79260763 79260681 ID=Msa0378440-mRNA-1:exon:19396;Parent=Msa0378440-mRNA-1
chr3_1 exon 79260900 79261030 79260900 ID=Msa0378440-mRNA-1:exon:19395;Parent=Msa0378440-mRNA-1
chr3_1 exon 79261135 79261187 79261135 ID=Msa0378440-mRNA-1:exon:19394;Parent=Msa0378440-mRNA-1
chr3_1 exon 79261953 79262011 79261953 ID=Msa0378440-mRNA-1:exon:19393;Parent=Msa0378440-mRNA-1
chr3_1 exon 79262082 79262187 79262082 ID=Msa0378440-mRNA-1:exon:19392;Parent=Msa0378440-mRNA-1
chr3_1 exon 79262294 79262360 79262294 ID=Msa0378440-mRNA-1:exon:19391;Parent=Msa0378440-mRNA-1
chr3_1 exon 79262524 79262637 79262524 ID=Msa0378440-mRNA-1:exon:19390;Parent=Msa0378440-mRNA-1
chr3_1 exon 79262736 79262814 79262736 ID=Msa0378440-mRNA-1:exon:19389;Parent=Msa0378440-mRNA-1
chr3_1 exon 79264260 79264418 79264260 ID=Msa0378440-mRNA-1:exon:19388;Parent=Msa0378440-mRNA-1
chr3_1 exon 79265311 79265443 79265311 ID=Msa0378440-mRNA-1:exon:19387;Parent=Msa0378440-mRNA-1
chr3_1 exon 79265534 79265702 79265534 ID=Msa0378440-mRNA-1:exon:19386;Parent=Msa0378440-mRNA-1
chr3_1 exon 79265834 79266105 79265834 ID=Msa0378440-mRNA-1:exon:19385;Parent=Msa0378440-mRNA-1
chr3_1 five_prime_UTR 79265917 79266105 79265917 ID=Msa0378440-mRNA-1:five_prime_utr;Parent=Msa0378440-mRNA-1
chr3_1 CDS 79265834 79265916 79265834 ID=Msa0378440-mRNA-1:cds;Parent=Msa0378440-mRNA-1
chr3_1 CDS 79265534 79265702 79265534 ID=Msa0378440-mRNA-1:cds;Parent=Msa0378440-mRNA-1
chr3_1 CDS 79265311 79265443 79265311 ID=Msa0378440-mRNA-1:cds;Parent=Msa0378440-mRNA-1
chr3_1 CDS 79264260 79264418 79264260 ID=Msa0378440-mRNA-1:cds;Parent=Msa0378440-mRNA-1
chr3_1 CDS 79262736 79262814 79262736 ID=Msa0378440-mRNA-1:cds;Parent=Msa0378440-mRNA-1
chr3_1 CDS 79262524 79262637 79262524 ID=Msa0378440-mRNA-1:cds;Parent=Msa0378440-mRNA-1
chr3_1 CDS 79262294 79262360 79262294 ID=Msa0378440-mRNA-1:cds;Parent=Msa0378440-mRNA-1
chr3_1 CDS 79262082 79262187 79262082 ID=Msa0378440-mRNA-1:cds;Parent=Msa0378440-mRNA-1
chr3_1 CDS 79261953 79262011 79261953 ID=Msa0378440-mRNA-1:cds;Parent=Msa0378440-mRNA-1
chr3_1 CDS 79261135 79261187 79261135 ID=Msa0378440-mRNA-1:cds;Parent=Msa0378440-mRNA-1
chr3_1 CDS 79260900 79261030 79260900 ID=Msa0378440-mRNA-1:cds;Parent=Msa0378440-mRNA-1
chr3_1 CDS 79260681 79260763 79260681 ID=Msa0378440-mRNA-1:cds;Parent=Msa0378440-mRNA-1
chr3_1 CDS 79260503 79260592 79260503 ID=Msa0378440-mRNA-1:cds;Parent=Msa0378440-mRNA-1
chr3_1 CDS 79260228 79260398 79260228 ID=Msa0378440-mRNA-1:cds;Parent=Msa0378440-mRNA-1
chr3_1 three_prime_UTR 79259820 79260227 79259820 ID=Msa0378440-mRNA-1:three_prime_utr;Parent=Msa0378440-mRNA-1
Gene Sequence

>Msa0378440

ATGAAGAAGACAACAACAAAACGTCCTTCCAAGAAATCCCACGCCGCCGAAAATGGAAACGGAAAACCTCCCTCTCCTACCATGGGAGATGGAGGAGAAAGAACGGTGAAGAAGGTGAAATTGTCGAAGGCTCTCACCATCCCCGATGGGACAACCGTTACCGATGCATGTAGACGAATGGCCGCTCGCCGTGTTGATGCCGTTCTCTTAACTGATTCCAGTGCTCTTCTTTCTGGAATTCTCACTGACAAGGATGTTGCTACTAGAGTTGTGGCTGAGGGATTGTCACCGGATGAGACACATGTCTCCAAAGTTATGACACGCAATCCTATCTTTGTTACATCTGATACCCTCGCCATTGATGCTCTTCAAAAGATGATTCAGGGTAAATTCAGGCACCTCCCAGTTGTGGAAAACGGTGAAGTCATTGCCATATTGGATATCACCAAATGTCTTTATGATGCCATAGCTAGGGTGGAGAAGGCTTCTCAGCAAGGGAGTGCCATTGCTGCTGCTGCAGTTGAGGGGGTGGAAAATCAGCGAGCTCCAAATGCTTTCATTGATACATTGAGGGAGCGCATGTTCAAGCCTTCCTTGTCAACTATACTCGGTGAAAATACAAAGGTTGCTATTACATCGGCATCAGATCCTGTCCATGTAGCTGCAAAAAGAATGCAAGAGTTGCGTGTCAGTTCATCTGTGATTGTAACAGAAAGCAAGATTCAGGGGATATTGACTTCGAAAGACATTCTTATGCGTGTTATGGCTCCAAATCTTTCACCAGAGTCGACCCTAGTGGAAAAGGTAATGACTCCAAACCCACAATGTGCAACATTAGAGACAACAATTATTGATGCTCTGCATATGATGCATGATGGGAAGTTCTTACATCTTCCTGTGGTGGACAAAGATGGAAATGTCGTTGCTTGTGTGGATGTTTTGCAGATAACTCATGCTGCAATTTCTCTGTTTTGGGACTCAGCTTTTGCTCTTGAGCCTCCTGAAGATTACGACACTAACAGTGAAGTCTCTGGACAACTGACTTTGGATGGGGCAGATACCACAAAGTCCACATATCAATCTGCAGGTTTTGGAAATTCATTTACTTTTAAATTTGAGGATCTCAATGGCCAAGTGCATCGCTTTACCTCTGGTTCTGAAAATCAAGACGAGCTTGTATCAGCTGTTATGCAAAGAATTGGTCCTGTTAATGATGGAGAACGCCCTAGGCTGCTGTATGAAGATGATGAGGGTGATAAAATTATAATTGCTACTAATAACGATCTTGCTGCTGCTGTCAGCTATGCTAGATCTGCAGGACTGAAGGCTCTAAAATTGAATTTGGAGTTTGCTGATTCTACCAAACTAAAACCAAACACTGATATAGCCACTAAGCAGAAAACCAGTATAGTGTCTCTCCGCTCTGGAATTTTTGCAGGTGCTGTTGTTCTAACAAGCATCAGTATATTGGTCTACTTAAAGCGCGCCAATCAGTGA

Protein sequence

>Msa0378440

MKKTTTKRPSKKSHAAENGNGKPPSPTMGDGGERTVKKVKLSKALTIPDGTTVTDACRRMAARRVDAVLLTDSSALLSGILTDKDVATRVVAEGLSPDETHVSKVMTRNPIFVTSDTLAIDALQKMIQGKFRHLPVVENGEVIAILDITKCLYDAIARVEKASQQGSAIAAAAVEGVENQRAPNAFIDTLRERMFKPSLSTILGENTKVAITSASDPVHVAAKRMQELRVSSSVIVTESKIQGILTSKDILMRVMAPNLSPESTLVEKVMTPNPQCATLETTIIDALHMMHDGKFLHLPVVDKDGNVVACVDVLQITHAAISLFWDSAFALEPPEDYDTNSEVSGQLTLDGADTTKSTYQSAGFGNSFTFKFEDLNGQVHRFTSGSENQDELVSAVMQRIGPVNDGERPRLLYEDDEGDKIIIATNNDLAAAVSYARSAGLKALKLNLEFADSTKLKPNTDIATKQKTSIVSLRSGIFAGAVVLTSISILVYLKRANQ*