AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1042420

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1042420 MtrunA17_Chr7g0262691 85.242 454 42 7 2 453 37 467 0.0 716
Msa1042420 MtrunA17_Chr1g0182791 51.004 498 171 22 2 441 40 522 4.59e-120 360
Msa1042420 MtrunA17_Chr3g0095391 29.425 435 206 16 51 424 70 464 2.94e-35 136
Msa1042420 MtrunA17_Chr1g0193321 46.795 156 63 6 175 324 403 544 2.71e-24 106
Msa1042420 MtrunA17_Chr7g0271251 36.199 221 97 8 159 362 357 550 1.24e-22 100
Msa1042420 MtrunA17_Chr5g0402031 68.254 63 16 1 255 317 122 180 8.39e-18 84.3
Msa1042420 MtrunA17_Chr1g0153241 64.615 65 19 1 255 319 102 162 1.73e-17 82.4
Msa1042420 MtrunA17_Chr7g0270871 46.939 98 38 4 255 347 219 307 3.65e-15 77.0
Msa1042420 MtrunA17_Chr7g0231461 49.367 79 37 1 222 300 284 359 1.89e-13 72.4
Msa1042420 MtrunA17_Chr4g0074161 47.436 78 38 1 256 330 224 301 2.31e-13 71.6
Msa1042420 MtrunA17_Chr1g0190731 54.545 55 25 0 256 310 211 265 4.46e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1042420 AT2G20180.7 39.344 427 165 24 47 432 10 383 1.67e-47 169
Msa1042420 AT2G20180.1 39.344 427 165 24 47 432 10 383 1.67e-47 169
Msa1042420 AT2G20180.5 39.344 427 165 24 47 432 10 383 1.67e-47 169
Msa1042420 AT2G20180.4 38.622 479 177 29 2 432 45 454 3.29e-47 169
Msa1042420 AT2G20180.6 38.622 479 177 29 2 432 45 454 3.29e-47 169
Msa1042420 AT2G20180.2 38.622 479 177 29 2 432 45 454 3.29e-47 169
Msa1042420 AT2G20180.3 38.622 479 177 29 2 432 45 454 3.29e-47 169
Msa1042420 AT4G28800.1 31.151 443 223 18 1 419 27 411 9.74e-37 140
Msa1042420 AT4G28800.2 30.159 441 222 17 2 419 40 417 9.92e-34 132
Msa1042420 AT2G20180.8 38.138 333 131 20 2 298 45 338 5.23e-31 122
Msa1042420 AT4G28790.1 33.133 332 155 16 46 347 77 371 4.89e-28 115
Msa1042420 AT4G28811.1 32.394 426 220 18 42 439 153 538 6.14e-21 95.9
Msa1042420 AT4G28790.2 31.206 282 146 11 46 302 77 335 2.25e-20 92.4
Msa1042420 AT2G46970.2 43.885 139 59 6 206 338 157 282 2.81e-19 89.7
Msa1042420 AT1G09530.3 48.387 124 51 4 207 323 303 420 3.05e-19 90.5
Msa1042420 AT1G09530.2 48.387 124 51 4 207 323 303 420 3.05e-19 90.5
Msa1042420 AT1G09530.5 48.387 124 51 4 207 323 303 420 3.05e-19 90.5
Msa1042420 AT1G09530.1 48.387 124 51 4 207 323 303 420 3.05e-19 90.5
Msa1042420 AT1G09530.4 48.387 124 51 4 207 323 303 420 3.05e-19 90.5
Msa1042420 AT1G09530.6 48.387 124 51 4 207 323 303 420 3.05e-19 90.5
Msa1042420 AT2G46970.1 43.885 139 59 6 206 338 188 313 3.29e-19 89.7
Msa1042420 AT5G67110.1 50.000 96 42 2 225 320 76 165 3.67e-19 86.3
Msa1042420 AT2G46970.3 43.885 139 59 6 206 338 166 291 4.25e-19 89.4
Msa1042420 AT4G36930.1 67.692 65 17 1 255 319 208 268 4.19e-18 86.3
Msa1042420 AT3G59060.1 44.156 154 64 7 205 344 212 357 6.27e-18 86.3
Msa1042420 AT3G59060.3 46.923 130 50 4 205 321 212 335 7.20e-18 85.9
Msa1042420 AT3G59060.2 46.923 130 50 4 205 321 212 335 7.20e-18 85.9
Msa1042420 AT3G59060.4 46.923 130 50 4 205 321 212 335 7.20e-18 85.9
Msa1042420 AT4G28815.2 34.857 175 63 6 255 427 85 210 8.32e-17 80.1
Msa1042420 AT4G28815.1 34.857 175 63 6 255 427 161 286 2.14e-16 80.1
Msa1042420 AT2G43010.4 64.516 62 22 0 260 321 273 334 2.80e-16 80.9
Msa1042420 AT2G43010.2 64.516 62 22 0 260 321 273 334 3.22e-16 80.9
Msa1042420 AT2G43010.1 64.516 62 22 0 260 321 273 334 3.72e-16 80.9
Msa1042420 AT2G43010.3 64.516 62 22 0 260 321 280 341 4.37e-16 80.5
Msa1042420 AT2G43010.5 64.516 62 22 0 260 321 315 376 5.75e-16 80.5
Msa1042420 AT2G24260.2 64.000 50 18 0 256 305 53 102 2.17e-14 73.2
Msa1042420 AT3G62090.1 41.803 122 57 5 256 373 183 294 3.62e-14 73.9
Msa1042420 AT3G62090.2 41.803 122 57 5 256 373 200 311 5.14e-14 73.6
Msa1042420 AT2G24260.1 64.000 50 18 0 256 305 156 205 9.04e-14 72.8
Msa1042420 AT4G30980.1 62.000 50 19 0 256 305 148 197 2.20e-13 71.2
Msa1042420 AT4G00050.2 55.932 59 26 0 247 305 114 172 2.28e-13 70.9
Msa1042420 AT4G00050.3 55.932 59 26 0 247 305 216 274 3.09e-13 71.6
Msa1042420 AT4G00050.1 55.932 59 26 0 247 305 216 274 3.27e-13 71.6
Msa1042420 AT4G30980.2 62.000 50 19 0 256 305 196 245 3.64e-13 71.2
Msa1042420 AT5G58010.1 55.556 54 24 0 256 309 117 170 1.09e-12 68.9
Msa1042420 AT1G02340.2 34.351 131 55 7 249 370 129 237 9.27e-11 63.2

Find 169 sgRNAs with CRISPR-Local

Find 382 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTACCTGACTGGCGGGTTTC+TGG 0.085323 7_1:-80410112 None:intergenic
TATTCTGTTTACAAATAAAT+TGG 0.109568 7_1:+80410729 Msa1042420:three_prime_UTR
TTTGCCTGCAGCCGCGAATT+TGG 0.127478 7_1:+80409249 Msa1042420:CDS
TGATAAGGATCACTGAAATT+TGG 0.152435 7_1:-80409409 None:intergenic
CTGATTTGCTGCTTGCATTC+TGG 0.157146 7_1:-80409329 None:intergenic
CAACCCTTTCTGAGAGATTA+TGG 0.251723 7_1:-80408142 None:intergenic
ATCCTCCGTGGCGGGGAAAT+TGG 0.256382 7_1:-80406037 None:intergenic
TTGCCTGCAGCCGCGAATTT+GGG 0.259006 7_1:+80409250 Msa1042420:CDS
AAAACTTGGCATACTGTATT+AGG 0.288340 7_1:-80410596 None:intergenic
CTTCTACTCCCTTCCTCTTT+CGG 0.289745 7_1:-80406351 None:intergenic
CACCGAAGTGGCGGTGGTTT+CGG 0.296809 7_1:+80406255 Msa1042420:CDS
AGTTACATGATTGGTTTCTT+AGG 0.305370 7_1:-80405612 None:intergenic
AATGGGGATGGGTATGGAAA+TGG 0.320817 7_1:+80409177 Msa1042420:CDS
ATATTGGGAAATGGCATTAC+TGG 0.322002 7_1:-80409211 None:intergenic
GGGAGTAGAAGCGGAGGAAT+GGG 0.328574 7_1:+80406363 Msa1042420:CDS
GATAAGGATCACTGAAATTT+GGG 0.328825 7_1:-80409408 None:intergenic
GGCATATACTGCTGGATTCC+AGG 0.330279 7_1:-80409139 None:intergenic
ACTTATACCTCGATCTAATA+AGG 0.337045 7_1:+80408297 Msa1042420:CDS
TCAAGAGGCCTGCTGACATT+TGG 0.353245 7_1:-80410085 None:intergenic
AAGAAAATGAAATGGCTTCA+TGG 0.355100 7_1:+80405894 Msa1042420:CDS
AGCAGAACCGGATAACATAT+TGG 0.356663 7_1:-80409227 None:intergenic
AGGGAGTAGAAGCGGAGGAA+TGG 0.360376 7_1:+80406362 Msa1042420:CDS
CTGTTTGATTGTTTCAATCA+AGG 0.372426 7_1:+80410396 Msa1042420:three_prime_UTR
TTCTTCAGATGACGGTGGTT+TGG 0.379401 7_1:-80405767 None:intergenic
TTCAAAATTGACGACGGTCC+TGG 0.387225 7_1:-80406124 None:intergenic
ATGGGGATGGGTATGGAAAT+GGG 0.393065 7_1:+80409178 Msa1042420:CDS
ATGAGATCATGGAGCTGTTA+TGG 0.394587 7_1:+80405718 Msa1042420:exon
CCATTTCCCAATATGTTATC+CGG 0.395626 7_1:+80409220 Msa1042420:CDS
CAGAATGCAAGCAGCAAATC+AGG 0.395981 7_1:+80409330 Msa1042420:CDS
GGCTGCAGGCAAAGCAGAAC+CGG 0.401251 7_1:-80409239 None:intergenic
TTCATATTTCGAATCTCAAA+TGG 0.410679 7_1:+80405566 Msa1042420:five_prime_UTR
GTTATTGTTGAGTGAGTATG+AGG 0.411340 7_1:-80405412 None:intergenic
ATTCTGTTTACAAATAAATT+GGG 0.414942 7_1:+80410730 Msa1042420:three_prime_UTR
AAGCGGAAAAGTTACATGAT+TGG 0.418255 7_1:-80405621 None:intergenic
TTCCGTTACACTACAAAACT+TGG 0.421479 7_1:-80410610 None:intergenic
GCAGAACCGGATAACATATT+GGG 0.422468 7_1:-80409226 None:intergenic
GATCCTTATCAACAATATCT+TGG 0.428452 7_1:+80409421 Msa1042420:CDS
GGTCCCAAATTCGCGGCTGC+AGG 0.429443 7_1:-80409253 None:intergenic
AATGGGAATGGGGATGGGTA+TGG 0.431065 7_1:+80409171 Msa1042420:CDS
TATACTACTAGCTCTCAATA+TGG 0.434563 7_1:+80410461 Msa1042420:three_prime_UTR
CAACTGTTGGCATATACTGC+TGG 0.435351 7_1:-80409147 None:intergenic
TTGTTATTAACCGTCGGCGG+CGG 0.436019 7_1:-80405971 None:intergenic
TTTCCCCGCCACGGAGGATA+GGG 0.443325 7_1:+80406041 Msa1042420:CDS
CTTCATGCAAGAAAATGAAA+TGG 0.444338 7_1:+80405886 Msa1042420:CDS
CCAACAGTTGGAATGGGAAT+GGG 0.446678 7_1:+80409160 Msa1042420:CDS
CGGCGGCGGGTTAAGGAAAT+CGG 0.453500 7_1:-80405957 None:intergenic
GGTCCAAGATATTGTTGATA+AGG 0.461439 7_1:-80409424 None:intergenic
TGCTCCGCTACCTTCCCAAC+CGG 0.462532 7_1:-80406325 None:intergenic
CCGGATAACATATTGGGAAA+TGG 0.466866 7_1:-80409220 None:intergenic
CCCATTCCCATTCCAACTGT+TGG 0.469499 7_1:-80409160 None:intergenic
CGGGTTTCTGGTTTCTCAAG+AGG 0.469774 7_1:-80410100 None:intergenic
ATGGTACCTATGATGTTTCC+TGG 0.471988 7_1:+80409121 Msa1042420:CDS
CATGGAGCTGTTATGGAAAA+CGG 0.477503 7_1:+80405725 Msa1042420:exon
TAGCAGTGAAGAAGCTGAAC+CGG 0.479213 7_1:+80406306 Msa1042420:CDS
GGTTGGGAAGGTAGCGGAGC+AGG 0.479306 7_1:+80406327 Msa1042420:CDS
GTTAAGGAAATCGGTGGAAA+AGG 0.482894 7_1:-80405948 None:intergenic
TTCGCAAAGTACGCGAAGTT+CGG 0.484693 7_1:-80406082 None:intergenic
TAGCGGAGCAGGACCGAAAG+AGG 0.484786 7_1:+80406338 Msa1042420:CDS
GTTGGAATGGGAATGGGGAT+GGG 0.486170 7_1:+80409166 Msa1042420:CDS
GACGATTCAACTCGCGGCGG+AGG 0.486968 7_1:+80405812 Msa1042420:CDS
AGTTGGAATGGGAATGGGGA+TGG 0.489416 7_1:+80409165 Msa1042420:CDS
AAACCAGAAACCCGCCAGTC+AGG 0.490474 7_1:+80410109 Msa1042420:CDS
GCCAACAGTTGGAATGGGAA+TGG 0.490991 7_1:+80409159 Msa1042420:CDS
GTGAAGAAGCTGAACCGGTT+GGG 0.494334 7_1:+80406311 Msa1042420:CDS
GTCGCTGCAGTTACAAGTGC+AGG 0.496663 7_1:+80408479 Msa1042420:CDS
AATAATGTGATCACCTCAGC+TGG 0.496940 7_1:+80409358 Msa1042420:CDS
GCATCAATTGAAACTGCATC+TGG 0.498748 7_1:-80409450 None:intergenic
TCGCGGCGGAGGAGCTTCAT+CGG 0.501663 7_1:+80405823 Msa1042420:CDS
CTATGCAGAGGCGTCGTGAT+CGG 0.503935 7_1:+80408245 Msa1042420:intron
TGGATTCCAGGAAACATCAT+AGG 0.504622 7_1:-80409127 None:intergenic
TGTTATTAACCGTCGGCGGC+GGG 0.505645 7_1:-80405970 None:intergenic
TTCATGACATGACATATTAG+TGG 0.506685 7_1:-80405496 None:intergenic
CAGTGCAGATGATGAGATCA+TGG 0.509755 7_1:+80405707 Msa1042420:intron
GAGGCCTGCTGACATTTGGT+TGG 0.510685 7_1:-80410081 None:intergenic
GTCTGACAAAGCATCTATGC+TGG 0.514190 7_1:+80408434 Msa1042420:intron
CGGAGGAGCTTCATCGGCGA+GGG 0.525295 7_1:+80405829 Msa1042420:CDS
TAAACAGAATAGTGTAAATG+AGG 0.527409 7_1:-80410717 None:intergenic
GAGGAAGGGAGTAGAAGCGG+AGG 0.530303 7_1:+80406357 Msa1042420:CDS
TTTCCTTAACCCGCCGCCGA+CGG 0.530560 7_1:+80405961 Msa1042420:CDS
GTATATGCCAACAGTTGGAA+TGG 0.532323 7_1:+80409153 Msa1042420:CDS
GGAGCAGGACCGAAAGAGGA+AGG 0.532955 7_1:+80406342 Msa1042420:CDS
TGTTTGATTGTTTCAATCAA+GGG 0.534729 7_1:+80410397 Msa1042420:three_prime_UTR
CACGGTGTAAGAACCGAGCC+AGG 0.537878 7_1:+80406106 Msa1042420:CDS
GATAAGGCAATTTACCTGAC+TGG 0.538094 7_1:-80410123 None:intergenic
TGATTGTTTCAATCAAGGGC+TGG 0.538352 7_1:+80410401 Msa1042420:three_prime_UTR
AAAGAGGAAGGGAGTAGAAG+CGG 0.541766 7_1:+80406354 Msa1042420:CDS
GTGGAAAAGGTTTGTTCGAA+AGG 0.542709 7_1:-80405935 None:intergenic
TTGGCCTCTGTGTAACGACT+TGG 0.544571 7_1:-80405748 None:intergenic
TATATGCCAACAGTTGGAAT+GGG 0.544698 7_1:+80409154 Msa1042420:CDS
AGGAGACACCGAAGTGGCGG+TGG 0.545778 7_1:+80406249 Msa1042420:CDS
GGAGACGGTAAGAAGTTTAG+CGG 0.545838 7_1:+80406216 Msa1042420:CDS
TGCCGAAACCACCGCCACTT+CGG 0.546281 7_1:-80406257 None:intergenic
GATGCAGTTTCAATTGATGC+AGG 0.546912 7_1:+80409453 Msa1042420:CDS
AAGAAGTTTAGCGGATCAAA+CGG 0.547113 7_1:+80406225 Msa1042420:CDS
AGGCAATTTACCTGACTGGC+GGG 0.549682 7_1:-80410119 None:intergenic
TCTCAAATGGATCAACAAGC+AGG 0.550538 7_1:+80405579 Msa1042420:five_prime_UTR
CAGCAGTATATGCCAACAGT+TGG 0.551794 7_1:+80409148 Msa1042420:CDS
GTCCTCCAATTTCCCCGCCA+CGG 0.552025 7_1:+80406032 Msa1042420:CDS
ACTTATGCAGATGATGTCCA+TGG 0.558617 7_1:+80409090 Msa1042420:CDS
GGTCCATAATCTCTCAGAAA+GGG 0.559468 7_1:+80408139 Msa1042420:CDS
ATGATTGGTTTCTTAGGACG+AGG 0.561500 7_1:-80405606 None:intergenic
AATTGACGACGGTCCTGGCT+CGG 0.563062 7_1:-80406119 None:intergenic
GAGCAGGACCGAAAGAGGAA+GGG 0.563277 7_1:+80406343 Msa1042420:CDS
TTCGCGTACTTTGCGAAGCA+CGG 0.563359 7_1:+80406088 Msa1042420:CDS
CTCCGTGGCGGGGAAATTGG+AGG 0.563842 7_1:-80406034 None:intergenic
TGAACCAACCAAATGTCAGC+AGG 0.563946 7_1:+80410077 Msa1042420:CDS
GCTTGCATTCTGGATGAACC+AGG 0.565601 7_1:-80409319 None:intergenic
ACCGTCTCCGAAAACGCCGC+CGG 0.567574 7_1:-80406202 None:intergenic
GGAACATGCGGCATGTGGAA+AGG 0.567580 7_1:-80409292 None:intergenic
GGGGAAATTGGAGGACGAGA+AGG 0.568420 7_1:-80406025 None:intergenic
AAAGAGATCTCGTGCTGCTG+AGG 0.571066 7_1:+80408118 Msa1042420:CDS
AGTGAAGAAGCTGAACCGGT+TGG 0.572237 7_1:+80406310 Msa1042420:CDS
AAAGGAGGCATCACGAACCT+TGG 0.572272 7_1:-80409274 None:intergenic
AGGTGTAATTAAAAGATGAC+AGG 0.574178 7_1:-80405446 None:intergenic
TCATGACATGACATATTAGT+GGG 0.574614 7_1:-80405495 None:intergenic
CAACAGTTGGAATGGGAATG+GGG 0.575101 7_1:+80409161 Msa1042420:CDS
ATGCCGCATGTTCCTACACC+TGG 0.577972 7_1:+80409301 Msa1042420:CDS
CAATTGAAACTGCATCTGGT+GGG 0.578724 7_1:-80409446 None:intergenic
TACAATACAAACTCCGACGT+CGG 0.578904 7_1:+80405997 Msa1042420:CDS
GAACCTTGGTCCCAAATTCG+CGG 0.579140 7_1:-80409260 None:intergenic
AGGTACCATGCCACATCCCA+TGG 0.582211 7_1:-80409107 None:intergenic
GTGTAGGAACATGCGGCATG+TGG 0.583623 7_1:-80409297 None:intergenic
GCGGAGGAGCTTCATCGGCG+AGG 0.587970 7_1:+80405828 Msa1042420:CDS
ATTTACATACATATACTCGA+TGG 0.593255 7_1:-80410781 None:intergenic
AATTGAAACTGCATCTGGTG+GGG 0.594089 7_1:-80409445 None:intergenic
TCAAGGGCTGGCTATGCAGA+TGG 0.595639 7_1:+80410413 Msa1042420:three_prime_UTR
GCAGTGGTTTCTTCAGATGA+CGG 0.597213 7_1:-80405775 None:intergenic
CAGTTTACCTTATTAGATCG+AGG 0.600812 7_1:-80408304 None:intergenic
CAGATGATGTCCATGGGATG+TGG 0.601497 7_1:+80409097 Msa1042420:CDS
AGAAGCTGAACCGGTTGGGA+AGG 0.602490 7_1:+80406315 Msa1042420:CDS
AGGTCCATAATCTCTCAGAA+AGG 0.604467 7_1:+80408138 Msa1042420:CDS
CAGCCGCGAATTTGGGACCA+AGG 0.608681 7_1:+80409257 Msa1042420:CDS
GTACTGTTGTTATTAACCGT+CGG 0.610377 7_1:-80405977 None:intergenic
TGATACACCAGCTGTGATGC+CGG 0.610769 7_1:+80406183 Msa1042420:CDS
TCCGCCGCGAGTTGAATCGT+CGG 0.611337 7_1:-80405810 None:intergenic
CATAATCTCTCAGAAAGGGT+TGG 0.614458 7_1:+80408143 Msa1042420:CDS
AAAGCAAAGCAAATTAAAGT+CGG 0.621251 7_1:-80405472 None:intergenic
ACATGCGGCATGTGGAAAGG+AGG 0.621566 7_1:-80409289 None:intergenic
AAGCAAATTAAAGTCGGTGA+AGG 0.621623 7_1:-80405466 None:intergenic
ATTCTGGATGAACCAGGTGT+AGG 0.621664 7_1:-80409313 None:intergenic
AATACAAACTCCGACGTCGG+TGG 0.622484 7_1:+80406000 Msa1042420:CDS
TGAATCATGTGTTCCAGCTG+AGG 0.623133 7_1:-80409371 None:intergenic
GAACCAGGTGTAGGAACATG+CGG 0.626770 7_1:-80409304 None:intergenic
AACTCCGACGATTCAACTCG+CGG 0.628283 7_1:+80405806 Msa1042420:CDS
TCAATTGAAACTGCATCTGG+TGG 0.633505 7_1:-80409447 None:intergenic
AAGGCAATTTACCTGACTGG+CGG 0.635377 7_1:-80410120 None:intergenic
TGAACCGGTTGGGAAGGTAG+CGG 0.635941 7_1:+80406321 Msa1042420:CDS
TCATCTGAAGAAACCACTGC+CGG 0.639590 7_1:+80405778 Msa1042420:CDS
GGAAGGAGACACCGAAGTGG+CGG 0.644638 7_1:+80406246 Msa1042420:CDS
AGTTTAGCGGATCAAACGGA+AGG 0.644672 7_1:+80406229 Msa1042420:CDS
GATGTCCATGGGATGTGGCA+TGG 0.651695 7_1:+80409102 Msa1042420:CDS
TGCGAGGGAATCAACAGTGG+TGG 0.655914 7_1:+80406153 Msa1042420:CDS
GTGGTTTCTTCAGATGACGG+TGG 0.658476 7_1:-80405772 None:intergenic
TTGGCATACTGTATTAGGAG+TGG 0.665219 7_1:-80410591 None:intergenic
TCACTGCTACTTGAACCGCC+CGG 0.678494 7_1:-80406292 None:intergenic
CGAGAAGGAACCACCGACGT+CGG 0.693171 7_1:-80406010 None:intergenic
TGCACGTGCCCTATCCTCCG+TGG 0.693280 7_1:-80406049 None:intergenic
AACGGAAGGAGACACCGAAG+TGG 0.694309 7_1:+80406243 Msa1042420:CDS
GGAATGGGAATATCAGAGCG+AGG 0.695426 7_1:+80406378 Msa1042420:CDS
CTCCAATTTCCCCGCCACGG+AGG 0.696080 7_1:+80406035 Msa1042420:CDS
GCAAGCTAATCTATACTACA+CGG 0.696429 7_1:+80410657 Msa1042420:three_prime_UTR
TGGGTACAATAATTGAACAG+AGG 0.701316 7_1:+80410749 Msa1042420:three_prime_UTR
TACACCAGCTGTGATGCCGG+CGG 0.704142 7_1:+80406186 Msa1042420:CDS
CTTATGCAGATGATGTCCAT+GGG 0.705255 7_1:+80409091 Msa1042420:CDS
GCAGTGTTCAAAATTGACGA+CGG 0.720480 7_1:-80406130 None:intergenic
TGCTGCGAGGGAATCAACAG+TGG 0.723697 7_1:+80406150 Msa1042420:CDS
CTGTTGTTATTAACCGTCGG+CGG 0.728995 7_1:-80405974 None:intergenic
ACGGCCAAGTCGTTACACAG+AGG 0.772761 7_1:+80405744 Msa1042420:CDS
TCCGACGATTCAACTCGCGG+CGG 0.774522 7_1:+80405809 Msa1042420:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACACAAAATAATTAATAAA+CGG - chr7_1:80405654-80405673 None:intergenic 10.0%
!! TAAAAAATGTTAATGAAAAA+TGG - chr7_1:80407980-80407999 None:intergenic 10.0%
!!! CATTTTGAAAAAAATTTTTT+TGG + chr7_1:80409804-80409823 Msa1042420:intron 10.0%
!! ATGTTATGTTATATATAAAT+TGG + chr7_1:80409925-80409944 Msa1042420:intron 10.0%
!! TAACTATGAATAATTAATAA+TGG + chr7_1:80410537-80410556 Msa1042420:intron 10.0%
!! TGTTAGAATAAAGAATAAAT+GGG - chr7_1:80407894-80407913 None:intergenic 15.0%
!!! TTTTATTTCTTGATAATGTA+AGG + chr7_1:80408346-80408365 Msa1042420:intron 15.0%
!!! TTTATTTCTTGATAATGTAA+GGG + chr7_1:80408347-80408366 Msa1042420:intron 15.0%
!! AAAGATTAGAAACAAAAATA+AGG - chr7_1:80408397-80408416 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG - chr7_1:80409679-80409698 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG + chr7_1:80409678-80409697 Msa1042420:intron 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG + chr7_1:80409702-80409721 Msa1042420:intron 15.0%
!! TATTCTGTTTACAAATAAAT+TGG + chr7_1:80410729-80410748 Msa1042420:three_prime_UTR 15.0%
!! ATTCTGTTTACAAATAAATT+GGG + chr7_1:80410730-80410749 Msa1042420:three_prime_UTR 15.0%
!! TCAAGTATTATCAATTATTG+AGG + chr7_1:80406872-80406891 Msa1042420:intron 20.0%
!! AAAGTTCAATTAATTACAGA+AGG + chr7_1:80407054-80407073 Msa1042420:intron 20.0%
!! AAGTTCAATTAATTACAGAA+GGG + chr7_1:80407055-80407074 Msa1042420:intron 20.0%
!! ACAGAAAGAAATAGAAAATA+AGG + chr7_1:80407618-80407637 Msa1042420:intron 20.0%
!! CAGAAAGAAATAGAAAATAA+GGG + chr7_1:80407619-80407638 Msa1042420:intron 20.0%
!! AATAAGGGATTCAATATATT+TGG + chr7_1:80407634-80407653 Msa1042420:intron 20.0%
!! ATTCAATATATTTGGCATTT+GGG + chr7_1:80407642-80407661 Msa1042420:intron 20.0%
!! TGTATAAATAGGAGAAATAA+AGG - chr7_1:80407804-80407823 None:intergenic 20.0%
!! CTGTTAGAATAAAGAATAAA+TGG - chr7_1:80407895-80407914 None:intergenic 20.0%
!! TTATCAAGAAATAAAACACT+GGG - chr7_1:80408342-80408361 None:intergenic 20.0%
!! ATTATCAAGAAATAAAACAC+TGG - chr7_1:80408343-80408362 None:intergenic 20.0%
!! AAACTAACCAATAGTTAATA+AGG - chr7_1:80409688-80409707 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG + chr7_1:80409764-80409783 Msa1042420:intron 20.0%
!!! TATTTTACTTTTAACTCAAC+TGG + chr7_1:80409948-80409967 Msa1042420:intron 20.0%
!!! ATTTTACTTTTAACTCAACT+GGG + chr7_1:80409949-80409968 Msa1042420:intron 20.0%
!!! AAACATTTGATCGTTTTTAT+TGG - chr7_1:80410024-80410043 None:intergenic 20.0%
!!! TATTCTGTGTTTTAATGATT+TGG + chr7_1:80410176-80410195 Msa1042420:intron 20.0%
!! CCATATTTGATGTATAATAA+AGG - chr7_1:80410329-80410348 None:intergenic 20.0%
!! CCTTTATTATACATCAAATA+TGG + chr7_1:80410326-80410345 Msa1042420:intron 20.0%
!!! TTTTTTCTTTGATTATGTTC+AGG + chr7_1:80410363-80410382 Msa1042420:intron 20.0%
!!! TTTGTGAAATATAGTTTTTC+CGG - chr7_1:80410510-80410529 None:intergenic 20.0%
!! AAACTATATTTCACAAAACA+TGG + chr7_1:80410513-80410532 Msa1042420:intron 20.0%
! AAAGCAAAGCAAATTAAAGT+CGG - chr7_1:80405475-80405494 None:intergenic 25.0%
! TTCATATTTCGAATCTCAAA+TGG + chr7_1:80405566-80405585 Msa1042420:five_prime_UTR 25.0%
!!! TATTGATTGTAGTTTTCTAC+TGG - chr7_1:80405863-80405882 None:intergenic 25.0%
! CCTAGAAAAGTTTCTTTAAA+AGG - chr7_1:80406609-80406628 None:intergenic 25.0%
!!! CCTTTTAAAGAAACTTTTCT+AGG + chr7_1:80406606-80406625 Msa1042420:intron 25.0%
!!! TGTTTGGTTCTACTTTTTAA+GGG - chr7_1:80406946-80406965 None:intergenic 25.0%
!!! ATGTTTGGTTCTACTTTTTA+AGG - chr7_1:80406947-80406966 None:intergenic 25.0%
! CTAACAACAAAATGTATGTT+TGG - chr7_1:80406962-80406981 None:intergenic 25.0%
! GCATTGCATATTCTATTAAA+TGG + chr7_1:80407241-80407260 Msa1042420:intron 25.0%
! TAAATGATTATCGTAGCAAT+TGG - chr7_1:80407504-80407523 None:intergenic 25.0%
!! TTCTATTTCTTTCTGTATCT+AGG - chr7_1:80407614-80407633 None:intergenic 25.0%
! GATTCAATATATTTGGCATT+TGG + chr7_1:80407641-80407660 Msa1042420:intron 25.0%
! TTCAATATATTTGGCATTTG+GGG + chr7_1:80407643-80407662 Msa1042420:intron 25.0%
! AATAGACAGTACAAAAACAT+GGG - chr7_1:80407921-80407940 None:intergenic 25.0%
!! TTTTCAACATTTTTGTGAGA+TGG + chr7_1:80407952-80407971 Msa1042420:intron 25.0%
! TCTAATTGTATTGCTGTAAA+AGG + chr7_1:80408044-80408063 Msa1042420:intron 25.0%
!!! ATGATCCACTGATATTTTTT+GGG - chr7_1:80408094-80408113 None:intergenic 25.0%
!!! TTTTAAAGAAACTTCACATC+TGG + chr7_1:80408862-80408881 Msa1042420:intron 25.0%
! ATAGAATTACTTCATTGACA+TGG - chr7_1:80410265-80410284 None:intergenic 25.0%
! ATTGAAGGTTAAATTGTTCT+TGG - chr7_1:80410290-80410309 None:intergenic 25.0%
! TCAGTACAAATTTGAATTGA+AGG - chr7_1:80410305-80410324 None:intergenic 25.0%
! TGTTTGATTGTTTCAATCAA+GGG + chr7_1:80410397-80410416 Msa1042420:three_prime_UTR 25.0%
!! TTGTGAAATATAGTTTTTCC+GGG - chr7_1:80410509-80410528 None:intergenic 25.0%
! TAAACAGAATAGTGTAAATG+AGG - chr7_1:80410720-80410739 None:intergenic 25.0%
! ATTTACATACATATACTCGA+TGG - chr7_1:80410784-80410803 None:intergenic 25.0%
AGGTGTAATTAAAAGATGAC+AGG - chr7_1:80405449-80405468 None:intergenic 30.0%
TCATGACATGACATATTAGT+GGG - chr7_1:80405498-80405517 None:intergenic 30.0%
TTCATGACATGACATATTAG+TGG - chr7_1:80405499-80405518 None:intergenic 30.0%
!! AGTTACATGATTGGTTTCTT+AGG - chr7_1:80405615-80405634 None:intergenic 30.0%
TAATAAACGGTAAGATGAAG+CGG - chr7_1:80405641-80405660 None:intergenic 30.0%
CTTCATGCAAGAAAATGAAA+TGG + chr7_1:80405886-80405905 Msa1042420:CDS 30.0%
AAGAAAATGAAATGGCTTCA+TGG + chr7_1:80405894-80405913 Msa1042420:CDS 30.0%
!!! GTTTGGTTCTACTTTTTAAG+GGG - chr7_1:80406945-80406964 None:intergenic 30.0%
! GCATATGGTTTAAAGTGTAA+GGG + chr7_1:80407001-80407020 Msa1042420:intron 30.0%
!! GGTTTTATGATTGAAGAAGT+TGG + chr7_1:80407076-80407095 Msa1042420:intron 30.0%
GAAAAATGCATTCTTGAACA+TGG + chr7_1:80407294-80407313 Msa1042420:intron 30.0%
TATCAAATTGTGCTTAGTTG+TGG + chr7_1:80407344-80407363 Msa1042420:intron 30.0%
TACGATAATCATTTAAGCTG+AGG + chr7_1:80407509-80407528 Msa1042420:intron 30.0%
! TTTGAAGTGAAAAAGAACTC+TGG - chr7_1:80407721-80407740 None:intergenic 30.0%
AGGGGTTATCATGTATAAAT+AGG - chr7_1:80407815-80407834 None:intergenic 30.0%
AGTGTAGTTGATTAAGTAGA+GGG - chr7_1:80407834-80407853 None:intergenic 30.0%
TAGTGTAGTTGATTAAGTAG+AGG - chr7_1:80407835-80407854 None:intergenic 30.0%
GTTAGAGTAATAGAGTAGTA+AGG - chr7_1:80407870-80407889 None:intergenic 30.0%
CAATAGACAGTACAAAAACA+TGG - chr7_1:80407922-80407941 None:intergenic 30.0%
!!! GATGATCCACTGATATTTTT+TGG - chr7_1:80408095-80408114 None:intergenic 30.0%
!! GTGAAAATTTTAATGTTGCG+AGG - chr7_1:80408216-80408235 None:intergenic 30.0%
ACTTATACCTCGATCTAATA+AGG + chr7_1:80408297-80408316 Msa1042420:CDS 30.0%
TCTATGCTCATAAATTGCTT+AGG + chr7_1:80408587-80408606 Msa1042420:intron 30.0%
AAAAGCAACTCAGTTGATTA+CGG + chr7_1:80408710-80408729 Msa1042420:intron 30.0%
! TTTATAGCTTCCAAAGGTTT+TGG + chr7_1:80408761-80408780 Msa1042420:intron 30.0%
! TTATAGCTTCCAAAGGTTTT+GGG + chr7_1:80408762-80408781 Msa1042420:intron 30.0%
TAACATAGGAAAGCTTAAGA+TGG + chr7_1:80408798-80408817 Msa1042420:intron 30.0%
TAAAGGTCACGAATATATAG+AGG - chr7_1:80409001-80409020 None:intergenic 30.0%
ATATTCGTGACCTTTACAAA+AGG + chr7_1:80409005-80409024 Msa1042420:intron 30.0%
GATAAGGATCACTGAAATTT+GGG - chr7_1:80409411-80409430 None:intergenic 30.0%
TGATAAGGATCACTGAAATT+TGG - chr7_1:80409412-80409431 None:intergenic 30.0%
GATCCTTATCAACAATATCT+TGG + chr7_1:80409421-80409440 Msa1042420:CDS 30.0%
GTACTCAGAAGTAATATTAG+AGG - chr7_1:80409487-80409506 None:intergenic 30.0%
GTAAATAATATATGTGGTGG+TGG - chr7_1:80409568-80409587 None:intergenic 30.0%
GGAGTAAATAATATATGTGG+TGG - chr7_1:80409571-80409590 None:intergenic 30.0%
GAGGGAGTAAATAATATATG+TGG - chr7_1:80409574-80409593 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr7_1:80409596-80409615 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + chr7_1:80409597-80409616 Msa1042420:intron 30.0%
! GTAGTGTGCAAAGTATTAAT+TGG + chr7_1:80409726-80409745 Msa1042420:intron 30.0%
! TGTGCAAAGTATTAATTGGA+GGG + chr7_1:80409730-80409749 Msa1042420:intron 30.0%
TCCTGCAAAATACTAAGATA+AGG - chr7_1:80410142-80410161 None:intergenic 30.0%
CTGTTTGATTGTTTCAATCA+AGG + chr7_1:80410396-80410415 Msa1042420:three_prime_UTR 30.0%
! TATACTACTAGCTCTCAATA+TGG + chr7_1:80410461-80410480 Msa1042420:three_prime_UTR 30.0%
ACTAGTATTATTGTAAGTCC+CGG + chr7_1:80410488-80410507 Msa1042420:intron 30.0%
AAAACTTGGCATACTGTATT+AGG - chr7_1:80410599-80410618 None:intergenic 30.0%
AAGCAAATTAAAGTCGGTGA+AGG - chr7_1:80405469-80405488 None:intergenic 35.0%
AAGCGGAAAAGTTACATGAT+TGG - chr7_1:80405624-80405643 None:intergenic 35.0%
! GTACTGTTGTTATTAACCGT+CGG - chr7_1:80405980-80405999 None:intergenic 35.0%
! AAGAAGTTTAGCGGATCAAA+CGG + chr7_1:80406225-80406244 Msa1042420:CDS 35.0%
GAATCCAAAAGTTAAAGCAG+CGG - chr7_1:80406477-80406496 None:intergenic 35.0%
AACCGTAGCTTTCATAAAAG+CGG + chr7_1:80406527-80406546 Msa1042420:intron 35.0%
CGAATTTATCACGATACACA+TGG - chr7_1:80406583-80406602 None:intergenic 35.0%
!!! CTATTTTTTCCAGTAGCGTA+TGG + chr7_1:80406687-80406706 Msa1042420:intron 35.0%
! GGCATATGGTTTAAAGTGTA+AGG + chr7_1:80407000-80407019 Msa1042420:intron 35.0%
! ATGGTTTAAAGTGTAAGGGT+AGG + chr7_1:80407005-80407024 Msa1042420:intron 35.0%
! TGGTTTAAAGTGTAAGGGTA+GGG + chr7_1:80407006-80407025 Msa1042420:intron 35.0%
TTGGACATGATGAGGAATAT+TGG + chr7_1:80407095-80407114 Msa1042420:intron 35.0%
TGGACATGATGAGGAATATT+GGG + chr7_1:80407096-80407115 Msa1042420:intron 35.0%
! TTCTTGAACATGGTTAGTTG+TGG + chr7_1:80407304-80407323 Msa1042420:intron 35.0%
CAGTTTGGACATTACAATAG+TGG + chr7_1:80407540-80407559 Msa1042420:intron 35.0%
ACATTACAATAGTGGCGAAA+TGG + chr7_1:80407548-80407567 Msa1042420:intron 35.0%
TATTGAGACTTGTGAGTGAA+AGG - chr7_1:80407754-80407773 None:intergenic 35.0%
GTGTAGTTGATTAAGTAGAG+GGG - chr7_1:80407833-80407852 None:intergenic 35.0%
!!! GGATGTTGATTTTGAATCTG+CGG + chr7_1:80408065-80408084 Msa1042420:intron 35.0%
CAGTTTACCTTATTAGATCG+AGG - chr7_1:80408307-80408326 None:intergenic 35.0%
!! TTTCTTGATAATGTAAGGGC+AGG + chr7_1:80408351-80408370 Msa1042420:intron 35.0%
!! TTCTTGATAATGTAAGGGCA+GGG + chr7_1:80408352-80408371 Msa1042420:intron 35.0%
TGTCAGACTGAATTAAGAGT+AGG - chr7_1:80408422-80408441 None:intergenic 35.0%
!!! GCAGGTAGATTCTTCTTTTT+TGG + chr7_1:80408497-80408516 Msa1042420:intron 35.0%
GAATTTACAACACAAACGTG+AGG - chr7_1:80408545-80408564 None:intergenic 35.0%
ATGCTCATAAATTGCTTAGG+CGG + chr7_1:80408590-80408609 Msa1042420:intron 35.0%
TGGAAGCTATAAAGACACTT+GGG - chr7_1:80408754-80408773 None:intergenic 35.0%
TTGGAAGCTATAAAGACACT+TGG - chr7_1:80408755-80408774 None:intergenic 35.0%
AGTGTCTTTATAGCTTCCAA+AGG + chr7_1:80408755-80408774 Msa1042420:intron 35.0%
TCATTTCTAATGCGTGAACT+TGG - chr7_1:80408978-80408997 None:intergenic 35.0%
TATATGCCAACAGTTGGAAT+GGG + chr7_1:80409154-80409173 Msa1042420:CDS 35.0%
ATATTGGGAAATGGCATTAC+TGG - chr7_1:80409214-80409233 None:intergenic 35.0%
CCATTTCCCAATATGTTATC+CGG + chr7_1:80409220-80409239 Msa1042420:CDS 35.0%
GGTCCAAGATATTGTTGATA+AGG - chr7_1:80409427-80409446 None:intergenic 35.0%
! GTGTGCAAAGTATTAATTGG+AGG + chr7_1:80409729-80409748 Msa1042420:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + chr7_1:80409830-80409849 Msa1042420:intron 35.0%
TCATTGCTTGATTCTACACA+TGG - chr7_1:80410060-80410079 None:intergenic 35.0%
! GCCTTATCTTAGTATTTTGC+AGG + chr7_1:80410138-80410157 Msa1042420:intron 35.0%
!! TGCCAAGTTTTGTAGTGTAA+CGG + chr7_1:80410608-80410627 Msa1042420:three_prime_UTR 35.0%
TTCCGTTACACTACAAAACT+TGG - chr7_1:80410613-80410632 None:intergenic 35.0%
GCAAGCTAATCTATACTACA+CGG + chr7_1:80410657-80410676 Msa1042420:three_prime_UTR 35.0%
TGGGTACAATAATTGAACAG+AGG + chr7_1:80410749-80410768 Msa1042420:three_prime_UTR 35.0%
TCTCAAATGGATCAACAAGC+AGG + chr7_1:80405579-80405598 Msa1042420:five_prime_UTR 40.0%
!! ATGATTGGTTTCTTAGGACG+AGG - chr7_1:80405609-80405628 None:intergenic 40.0%
ATGAGATCATGGAGCTGTTA+TGG + chr7_1:80405718-80405737 Msa1042420:exon 40.0%
CATGGAGCTGTTATGGAAAA+CGG + chr7_1:80405725-80405744 Msa1042420:exon 40.0%
! GTGGAAAAGGTTTGTTCGAA+AGG - chr7_1:80405938-80405957 None:intergenic 40.0%
GTTAAGGAAATCGGTGGAAA+AGG - chr7_1:80405951-80405970 None:intergenic 40.0%
TACAATACAAACTCCGACGT+CGG + chr7_1:80405997-80406016 Msa1042420:CDS 40.0%
GCAGTGTTCAAAATTGACGA+CGG - chr7_1:80406133-80406152 None:intergenic 40.0%
! AATTTTGAACACTGCTGCGA+GGG + chr7_1:80406138-80406157 Msa1042420:CDS 40.0%
! TTCGGCAACTTTTGATGAAC+CGG + chr7_1:80406273-80406292 Msa1042420:CDS 40.0%
GTGTGTGTGATTGTGCTTTA+TGG + chr7_1:80406504-80406523 Msa1042420:intron 40.0%
TGAGTTGCTCACACTATGTA+CGG - chr7_1:80406665-80406684 None:intergenic 40.0%
TTAGTTGCGACTTTACCACT+TGG + chr7_1:80406978-80406997 Msa1042420:intron 40.0%
TAGTTGCGACTTTACCACTT+GGG + chr7_1:80406979-80406998 Msa1042420:intron 40.0%
CTTTAAACCATATGCCCAAG+TGG - chr7_1:80406996-80407015 None:intergenic 40.0%
! GGTTTAAAGTGTAAGGGTAG+GGG + chr7_1:80407007-80407026 Msa1042420:intron 40.0%
TGAAGAAGTTGGACATGATG+AGG + chr7_1:80407087-80407106 Msa1042420:intron 40.0%
ACATGATGAGGAATATTGGG+TGG + chr7_1:80407099-80407118 Msa1042420:intron 40.0%
TTGTGAAAGCTGCTTAAGCA+TGG + chr7_1:80407141-80407160 Msa1042420:intron 40.0%
CAAAGAACTTTAGTCCAGCT+TGG - chr7_1:80407218-80407237 None:intergenic 40.0%
CAAATTGTGCTTAGTTGTGG+AGG + chr7_1:80407347-80407366 Msa1042420:intron 40.0%
CTTAGTTGTGGAGGTTGAAT+AGG + chr7_1:80407356-80407375 Msa1042420:intron 40.0%
! GTTGAATAGGCAGGGTTTTT+AGG + chr7_1:80407369-80407388 Msa1042420:intron 40.0%
!!! AATAGGCAGGGTTTTTAGGT+AGG + chr7_1:80407373-80407392 Msa1042420:intron 40.0%
AGGTAGGAATCCTTAGCAAT+TGG + chr7_1:80407389-80407408 Msa1042420:intron 40.0%
TCCTTAGCAATTGGCATAAG+CGG + chr7_1:80407398-80407417 Msa1042420:intron 40.0%
! CCAAACTTTTCCTGCTTCAT+CGG - chr7_1:80407432-80407451 None:intergenic 40.0%
CGATGAAGCAGGAAAAGTTT+GGG + chr7_1:80407430-80407449 Msa1042420:intron 40.0%
GCTGAGGACTAAAATCAGTT+TGG + chr7_1:80407525-80407544 Msa1042420:intron 40.0%
GGAAGCCCAAAAAATATCAG+TGG + chr7_1:80408086-80408105 Msa1042420:CDS 40.0%
AGGTCCATAATCTCTCAGAA+AGG + chr7_1:80408138-80408157 Msa1042420:CDS 40.0%
GGTCCATAATCTCTCAGAAA+GGG + chr7_1:80408139-80408158 Msa1042420:CDS 40.0%
! CAACCCTTTCTGAGAGATTA+TGG - chr7_1:80408145-80408164 None:intergenic 40.0%
CATAATCTCTCAGAAAGGGT+TGG + chr7_1:80408143-80408162 Msa1042420:CDS 40.0%
CACATTGCATTTCTATGCAG+AGG + chr7_1:80408233-80408252 Msa1042420:intron 40.0%
! CTTTTGTAATGTTCCACCAC+AGG - chr7_1:80408695-80408714 None:intergenic 40.0%
TATAAAGACACTTGGGAGGA+AGG - chr7_1:80408747-80408766 None:intergenic 40.0%
AAGCTATAAAGACACTTGGG+AGG - chr7_1:80408751-80408770 None:intergenic 40.0%
GAGGATGGGTACTATAACAT+AGG + chr7_1:80408784-80408803 Msa1042420:intron 40.0%
TCACATCTGGAAATTGTGAG+AGG + chr7_1:80408875-80408894 Msa1042420:intron 40.0%
CACATCTGGAAATTGTGAGA+GGG + chr7_1:80408876-80408895 Msa1042420:intron 40.0%
! AGTGGCATGACCTTTTGTAA+AGG - chr7_1:80409018-80409037 None:intergenic 40.0%
!! CAACTTGCTACACTACATAG+TGG - chr7_1:80409036-80409055 None:intergenic 40.0%
CACTATGTAGTGTAGCAAGT+TGG + chr7_1:80409034-80409053 Msa1042420:intron 40.0%
ACTTATGCAGATGATGTCCA+TGG + chr7_1:80409090-80409109 Msa1042420:CDS 40.0%
CTTATGCAGATGATGTCCAT+GGG + chr7_1:80409091-80409110 Msa1042420:CDS 40.0%
ATGGTACCTATGATGTTTCC+TGG + chr7_1:80409121-80409140 Msa1042420:CDS 40.0%
TGGATTCCAGGAAACATCAT+AGG - chr7_1:80409130-80409149 None:intergenic 40.0%
GTATATGCCAACAGTTGGAA+TGG + chr7_1:80409153-80409172 Msa1042420:CDS 40.0%
CCGGATAACATATTGGGAAA+TGG - chr7_1:80409223-80409242 None:intergenic 40.0%
GCAGAACCGGATAACATATT+GGG - chr7_1:80409229-80409248 None:intergenic 40.0%
AGCAGAACCGGATAACATAT+TGG - chr7_1:80409230-80409249 None:intergenic 40.0%
AATAATGTGATCACCTCAGC+TGG + chr7_1:80409358-80409377 Msa1042420:CDS 40.0%
AATTGAAACTGCATCTGGTG+GGG - chr7_1:80409448-80409467 None:intergenic 40.0%
CAATTGAAACTGCATCTGGT+GGG - chr7_1:80409449-80409468 None:intergenic 40.0%
TCAATTGAAACTGCATCTGG+TGG - chr7_1:80409450-80409469 None:intergenic 40.0%
GCATCAATTGAAACTGCATC+TGG - chr7_1:80409453-80409472 None:intergenic 40.0%
GATGCAGTTTCAATTGATGC+AGG + chr7_1:80409453-80409472 Msa1042420:CDS 40.0%
TTGTTGCACATGAGATCCAT+TGG + chr7_1:80409534-80409553 Msa1042420:intron 40.0%
!! ATAATATATGTGGTGGTGGC+AGG - chr7_1:80409564-80409583 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr7_1:80409834-80409853 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr7_1:80409834-80409853 Msa1042420:intron 40.0%
GATAAGGCAATTTACCTGAC+TGG - chr7_1:80410126-80410145 None:intergenic 40.0%
ATAGCTCTTGTCCTGTGTTA+TGG + chr7_1:80410201-80410220 Msa1042420:intron 40.0%
TAGCTCTTGTCCTGTGTTAT+GGG + chr7_1:80410202-80410221 Msa1042420:intron 40.0%
ACATGGTAAACAACCAGATC+TGG - chr7_1:80410248-80410267 None:intergenic 40.0%
TGATTGTTTCAATCAAGGGC+TGG + chr7_1:80410401-80410420 Msa1042420:three_prime_UTR 40.0%
TTGGCATACTGTATTAGGAG+TGG - chr7_1:80410594-80410613 None:intergenic 40.0%
CAGTGCAGATGATGAGATCA+TGG + chr7_1:80405707-80405726 Msa1042420:intron 45.0%
! TTCTTCAGATGACGGTGGTT+TGG - chr7_1:80405770-80405789 None:intergenic 45.0%
GCAGTGGTTTCTTCAGATGA+CGG - chr7_1:80405778-80405797 None:intergenic 45.0%
TCATCTGAAGAAACCACTGC+CGG + chr7_1:80405778-80405797 Msa1042420:CDS 45.0%
! GAATCGTCGGAGTTTTTCAC+CGG - chr7_1:80405800-80405819 None:intergenic 45.0%
! CTGTTGTTATTAACCGTCGG+CGG - chr7_1:80405977-80405996 None:intergenic 45.0%
TTCGCAAAGTACGCGAAGTT+CGG - chr7_1:80406085-80406104 None:intergenic 45.0%
TTCAAAATTGACGACGGTCC+TGG - chr7_1:80406127-80406146 None:intergenic 45.0%
! CAATTTTGAACACTGCTGCG+AGG + chr7_1:80406137-80406156 Msa1042420:CDS 45.0%
GGAGACGGTAAGAAGTTTAG+CGG + chr7_1:80406216-80406235 Msa1042420:CDS 45.0%
! AGTTTAGCGGATCAAACGGA+AGG + chr7_1:80406229-80406248 Msa1042420:CDS 45.0%
! TCGGCAACTTTTGATGAACC+GGG + chr7_1:80406274-80406293 Msa1042420:CDS 45.0%
TAGCAGTGAAGAAGCTGAAC+CGG + chr7_1:80406306-80406325 Msa1042420:CDS 45.0%
CTTCTACTCCCTTCCTCTTT+CGG - chr7_1:80406354-80406373 None:intergenic 45.0%
AAAGAGGAAGGGAGTAGAAG+CGG + chr7_1:80406354-80406373 Msa1042420:CDS 45.0%
AAAAGTTAAAGCAGCGGCGT+GGG - chr7_1:80406471-80406490 None:intergenic 45.0%
!!! GGCCGCTTTTATGAAAGCTA+CGG - chr7_1:80406532-80406551 None:intergenic 45.0%
GGTTGCATGGCAAGAAGAAT+TGG + chr7_1:80406708-80406727 Msa1042420:intron 45.0%
GACTTTACCACTTGGGCATA+TGG + chr7_1:80406986-80407005 Msa1042420:intron 45.0%
TAAAGTGTAAGGGTAGGGGT+AGG + chr7_1:80407011-80407030 Msa1042420:intron 45.0%
AAAGTGTAAGGGTAGGGGTA+GGG + chr7_1:80407012-80407031 Msa1042420:intron 45.0%
AGAACTTTAGTCCAGCTTGG+TGG - chr7_1:80407215-80407234 None:intergenic 45.0%
TTGTGGAGGTTGAATAGGCA+GGG + chr7_1:80407361-80407380 Msa1042420:intron 45.0%
ACCGCTTATGCCAATTGCTA+AGG - chr7_1:80407402-80407421 None:intergenic 45.0%
CCGATGAAGCAGGAAAAGTT+TGG + chr7_1:80407429-80407448 Msa1042420:intron 45.0%
! GTCTGACAAAGCATCTATGC+TGG + chr7_1:80408434-80408453 Msa1042420:intron 45.0%
!!! TAGCTTCCAAAGGTTTTGGG+AGG + chr7_1:80408765-80408784 Msa1042420:intron 45.0%
!!! TTCCAAAGGTTTTGGGAGGA+TGG + chr7_1:80408769-80408788 Msa1042420:intron 45.0%
!!! TCCAAAGGTTTTGGGAGGAT+GGG + chr7_1:80408770-80408789 Msa1042420:intron 45.0%
CAGCATCTATGACTGTCTAG+TGG - chr7_1:80408908-80408927 None:intergenic 45.0%
CAACTGTTGGCATATACTGC+TGG - chr7_1:80409150-80409169 None:intergenic 45.0%
CAGCAGTATATGCCAACAGT+TGG + chr7_1:80409148-80409167 Msa1042420:CDS 45.0%
CCAACAGTTGGAATGGGAAT+GGG + chr7_1:80409160-80409179 Msa1042420:CDS 45.0%
CAACAGTTGGAATGGGAATG+GGG + chr7_1:80409161-80409180 Msa1042420:CDS 45.0%
AATGGGGATGGGTATGGAAA+TGG + chr7_1:80409177-80409196 Msa1042420:CDS 45.0%
ATGGGGATGGGTATGGAAAT+GGG + chr7_1:80409178-80409197 Msa1042420:CDS 45.0%
ATTCTGGATGAACCAGGTGT+AGG - chr7_1:80409316-80409335 None:intergenic 45.0%
!! CTGATTTGCTGCTTGCATTC+TGG - chr7_1:80409332-80409351 None:intergenic 45.0%
CAGAATGCAAGCAGCAAATC+AGG + chr7_1:80409330-80409349 Msa1042420:CDS 45.0%
TGAATCATGTGTTCCAGCTG+AGG - chr7_1:80409374-80409393 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr7_1:80409833-80409852 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr7_1:80409833-80409852 Msa1042420:intron 45.0%
!! TTGAAACGGAGGGAGTACTA+TGG + chr7_1:80409844-80409863 Msa1042420:intron 45.0%
TGAACCAACCAAATGTCAGC+AGG + chr7_1:80410077-80410096 Msa1042420:CDS 45.0%
AAGGCAATTTACCTGACTGG+CGG - chr7_1:80410123-80410142 None:intergenic 45.0%
TGTCCTGTGTTATGGGTTTC+TGG + chr7_1:80410209-80410228 Msa1042420:intron 45.0%
TTGGCCTCTGTGTAACGACT+TGG - chr7_1:80405751-80405770 None:intergenic 50.0%
! GTGGTTTCTTCAGATGACGG+TGG - chr7_1:80405775-80405794 None:intergenic 50.0%
AACTCCGACGATTCAACTCG+CGG + chr7_1:80405806-80405825 Msa1042420:CDS 50.0%
! TTGTTATTAACCGTCGGCGG+CGG - chr7_1:80405974-80405993 None:intergenic 50.0%
AATACAAACTCCGACGTCGG+TGG + chr7_1:80406000-80406019 Msa1042420:CDS 50.0%
TTCGCGTACTTTGCGAAGCA+CGG + chr7_1:80406088-80406107 Msa1042420:CDS 50.0%
TGATACACCAGCTGTGATGC+CGG + chr7_1:80406183-80406202 Msa1042420:CDS 50.0%
! GCAACTTTTGATGAACCGGG+CGG + chr7_1:80406277-80406296 Msa1042420:CDS 50.0%
AGTGAAGAAGCTGAACCGGT+TGG + chr7_1:80406310-80406329 Msa1042420:CDS 50.0%
GTGAAGAAGCTGAACCGGTT+GGG + chr7_1:80406311-80406330 Msa1042420:CDS 50.0%
GGAATGGGAATATCAGAGCG+AGG + chr7_1:80406378-80406397 Msa1042420:CDS 50.0%
CAAAAGTTAAAGCAGCGGCG+TGG - chr7_1:80406472-80406491 None:intergenic 50.0%
!! CACGCCGCTGCTTTAACTTT+TGG + chr7_1:80406470-80406489 Msa1042420:intron 50.0%
TTGCTCACACTATGTACGGC+TGG - chr7_1:80406661-80406680 None:intergenic 50.0%
TCCAGTAGCGTATGGTTGCA+TGG + chr7_1:80406695-80406714 Msa1042420:intron 50.0%
GTTGTGGAGGTTGAATAGGC+AGG + chr7_1:80407360-80407379 Msa1042420:intron 50.0%
GGTGATACTTCCGATGAAGC+AGG + chr7_1:80407419-80407438 Msa1042420:intron 50.0%
GCATTTGGGGAGAAGACTTG+AGG + chr7_1:80407656-80407675 Msa1042420:intron 50.0%
! AAAGAGATCTCGTGCTGCTG+AGG + chr7_1:80408118-80408137 Msa1042420:CDS 50.0%
ACCCATCCTCCCAAAACCTT+TGG - chr7_1:80408774-80408793 None:intergenic 50.0%
CAGATGATGTCCATGGGATG+TGG + chr7_1:80409097-80409116 Msa1042420:CDS 50.0%
GGCATATACTGCTGGATTCC+AGG - chr7_1:80409142-80409161 None:intergenic 50.0%
GCCAACAGTTGGAATGGGAA+TGG + chr7_1:80409159-80409178 Msa1042420:CDS 50.0%
CCCATTCCCATTCCAACTGT+TGG - chr7_1:80409163-80409182 None:intergenic 50.0%
AGTTGGAATGGGAATGGGGA+TGG + chr7_1:80409165-80409184 Msa1042420:CDS 50.0%
GTTGGAATGGGAATGGGGAT+GGG + chr7_1:80409166-80409185 Msa1042420:CDS 50.0%
AATGGGAATGGGGATGGGTA+TGG + chr7_1:80409171-80409190 Msa1042420:CDS 50.0%
GAACCTTGGTCCCAAATTCG+CGG - chr7_1:80409263-80409282 None:intergenic 50.0%
!! AAAGGAGGCATCACGAACCT+TGG - chr7_1:80409277-80409296 None:intergenic 50.0%
GAACCAGGTGTAGGAACATG+CGG - chr7_1:80409307-80409326 None:intergenic 50.0%
GCTTGCATTCTGGATGAACC+AGG - chr7_1:80409322-80409341 None:intergenic 50.0%
TCAAGAGGCCTGCTGACATT+TGG - chr7_1:80410088-80410107 None:intergenic 50.0%
!! CGGGTTTCTGGTTTCTCAAG+AGG - chr7_1:80410103-80410122 None:intergenic 50.0%
AGGCAATTTACCTGACTGGC+GGG - chr7_1:80410122-80410141 None:intergenic 50.0%
GCTCCAGAAACCCATAACAC+AGG - chr7_1:80410215-80410234 None:intergenic 50.0%
AGCACAGTGACTTCCAGATC+TGG + chr7_1:80410232-80410251 Msa1042420:intron 50.0%
ACGGCCAAGTCGTTACACAG+AGG + chr7_1:80405744-80405763 Msa1042420:CDS 55.0%
! TCGGAGTTTTTCACCGGCAG+TGG - chr7_1:80405794-80405813 None:intergenic 55.0%
TGTTATTAACCGTCGGCGGC+GGG - chr7_1:80405973-80405992 None:intergenic 55.0%
GGGGAAATTGGAGGACGAGA+AGG - chr7_1:80406028-80406047 None:intergenic 55.0%
!! TACGCGAAGTTCGGTGTCTC+AGG - chr7_1:80406076-80406095 None:intergenic 55.0%
AATTGACGACGGTCCTGGCT+CGG - chr7_1:80406122-80406141 None:intergenic 55.0%
TGCTGCGAGGGAATCAACAG+TGG + chr7_1:80406150-80406169 Msa1042420:CDS 55.0%
TGCGAGGGAATCAACAGTGG+TGG + chr7_1:80406153-80406172 Msa1042420:CDS 55.0%
AACGGAAGGAGACACCGAAG+TGG + chr7_1:80406243-80406262 Msa1042420:CDS 55.0%
! TCACTGCTACTTGAACCGCC+CGG - chr7_1:80406295-80406314 None:intergenic 55.0%
AGAAGCTGAACCGGTTGGGA+AGG + chr7_1:80406315-80406334 Msa1042420:CDS 55.0%
TGAACCGGTTGGGAAGGTAG+CGG + chr7_1:80406321-80406340 Msa1042420:CDS 55.0%
GAGCAGGACCGAAAGAGGAA+GGG + chr7_1:80406343-80406362 Msa1042420:CDS 55.0%
AGGGAGTAGAAGCGGAGGAA+TGG + chr7_1:80406362-80406381 Msa1042420:CDS 55.0%
GGGAGTAGAAGCGGAGGAAT+GGG + chr7_1:80406363-80406382 Msa1042420:CDS 55.0%
GCCATGCAACCATACGCTAC+TGG - chr7_1:80406699-80406718 None:intergenic 55.0%
GGGTAGGGTGATGTTTGAGC+AGG + chr7_1:80407027-80407046 Msa1042420:intron 55.0%
!! CTATGCAGAGGCGTCGTGAT+CGG + chr7_1:80408245-80408264 Msa1042420:intron 55.0%
GTCGCTGCAGTTACAAGTGC+AGG + chr7_1:80408479-80408498 Msa1042420:CDS 55.0%
AGCTTGCACCATGCCACCAT+CGG + chr7_1:80408669-80408688 Msa1042420:intron 55.0%
AATGTTCCACCACAGGCCGA+TGG - chr7_1:80408688-80408707 None:intergenic 55.0%
GATGTCCATGGGATGTGGCA+TGG + chr7_1:80409102-80409121 Msa1042420:CDS 55.0%
AGGTACCATGCCACATCCCA+TGG - chr7_1:80409110-80409129 None:intergenic 55.0%
TTTGCCTGCAGCCGCGAATT+TGG + chr7_1:80409249-80409268 Msa1042420:CDS 55.0%
TTGCCTGCAGCCGCGAATTT+GGG + chr7_1:80409250-80409269 Msa1042420:CDS 55.0%
ACATGCGGCATGTGGAAAGG+AGG - chr7_1:80409292-80409311 None:intergenic 55.0%
GGAACATGCGGCATGTGGAA+AGG - chr7_1:80409295-80409314 None:intergenic 55.0%
GTGTAGGAACATGCGGCATG+TGG - chr7_1:80409300-80409319 None:intergenic 55.0%
ATGCCGCATGTTCCTACACC+TGG + chr7_1:80409301-80409320 Msa1042420:CDS 55.0%
! GGTGGTGGCAGGATATCCAA+TGG - chr7_1:80409553-80409572 None:intergenic 55.0%
GAGGCCTGCTGACATTTGGT+TGG - chr7_1:80410084-80410103 None:intergenic 55.0%
AAACCAGAAACCCGCCAGTC+AGG + chr7_1:80410109-80410128 Msa1042420:CDS 55.0%
!! TTACCTGACTGGCGGGTTTC+TGG - chr7_1:80410115-80410134 None:intergenic 55.0%
!! TCAAGGGCTGGCTATGCAGA+TGG + chr7_1:80410413-80410432 Msa1042420:three_prime_UTR 55.0%
GGAGTTCTTGCGTGCATTGC+AGG + chr7_1:80410558-80410577 Msa1042420:intron 55.0%
TCCGACGATTCAACTCGCGG+CGG + chr7_1:80405809-80405828 Msa1042420:CDS 60.0%
! TCCGCCGCGAGTTGAATCGT+CGG - chr7_1:80405813-80405832 None:intergenic 60.0%
!! CGGCGGGTTAAGGAAATCGG+TGG - chr7_1:80405957-80405976 None:intergenic 60.0%
!! CGGCGGCGGGTTAAGGAAAT+CGG - chr7_1:80405960-80405979 None:intergenic 60.0%
TTTCCTTAACCCGCCGCCGA+CGG + chr7_1:80405961-80405980 Msa1042420:CDS 60.0%
CGAGAAGGAACCACCGACGT+CGG - chr7_1:80406013-80406032 None:intergenic 60.0%
GTCCTCCAATTTCCCCGCCA+CGG + chr7_1:80406032-80406051 Msa1042420:CDS 60.0%
! ATCCTCCGTGGCGGGGAAAT+TGG - chr7_1:80406040-80406059 None:intergenic 60.0%
ATTTCCCCGCCACGGAGGAT+AGG + chr7_1:80406040-80406059 Msa1042420:CDS 60.0%
TTTCCCCGCCACGGAGGATA+GGG + chr7_1:80406041-80406060 Msa1042420:CDS 60.0%
CACGGTGTAAGAACCGAGCC+AGG + chr7_1:80406106-80406125 Msa1042420:CDS 60.0%
TACACCAGCTGTGATGCCGG+CGG + chr7_1:80406186-80406205 Msa1042420:CDS 60.0%
! TGTGATGCCGGCGGCGTTTT+CGG + chr7_1:80406195-80406214 Msa1042420:CDS 60.0%
GGAAGGAGACACCGAAGTGG+CGG + chr7_1:80406246-80406265 Msa1042420:CDS 60.0%
CACCGAAGTGGCGGTGGTTT+CGG + chr7_1:80406255-80406274 Msa1042420:CDS 60.0%
TGCCGAAACCACCGCCACTT+CGG - chr7_1:80406260-80406279 None:intergenic 60.0%
TGCTCCGCTACCTTCCCAAC+CGG - chr7_1:80406328-80406347 None:intergenic 60.0%
TAGCGGAGCAGGACCGAAAG+AGG + chr7_1:80406338-80406357 Msa1042420:CDS 60.0%
GGAGCAGGACCGAAAGAGGA+AGG + chr7_1:80406342-80406361 Msa1042420:CDS 60.0%
GAGGAAGGGAGTAGAAGCGG+AGG + chr7_1:80406357-80406376 Msa1042420:CDS 60.0%
AAAAGCGGCCATACCAGCCG+TGG + chr7_1:80406542-80406561 Msa1042420:intron 60.0%
ATGTGCAGCCACGGCTGGTA+TGG - chr7_1:80406553-80406572 None:intergenic 60.0%
ATACCAGCCGTGGCTGCACA+TGG + chr7_1:80406552-80406571 Msa1042420:intron 60.0%
CTGCATGTGAGCCACCAAGC+TGG + chr7_1:80407201-80407220 Msa1042420:intron 60.0%
GGCTGCAGGCAAAGCAGAAC+CGG - chr7_1:80409242-80409261 None:intergenic 60.0%
! CAGCCGCGAATTTGGGACCA+AGG + chr7_1:80409257-80409276 Msa1042420:CDS 60.0%
GACGATTCAACTCGCGGCGG+AGG + chr7_1:80405812-80405831 Msa1042420:CDS 65.0%
TCGCGGCGGAGGAGCTTCAT+CGG + chr7_1:80405823-80405842 Msa1042420:CDS 65.0%
CGGAGGAGCTTCATCGGCGA+GGG + chr7_1:80405829-80405848 Msa1042420:CDS 65.0%
!! TAACCGTCGGCGGCGGGTTA+AGG - chr7_1:80405967-80405986 None:intergenic 65.0%
! CTCCGTGGCGGGGAAATTGG+AGG - chr7_1:80406037-80406056 None:intergenic 65.0%
CTCCAATTTCCCCGCCACGG+AGG + chr7_1:80406035-80406054 Msa1042420:CDS 65.0%
ACGTGCCCTATCCTCCGTGG+CGG - chr7_1:80406049-80406068 None:intergenic 65.0%
TGCACGTGCCCTATCCTCCG+TGG - chr7_1:80406052-80406071 None:intergenic 65.0%
ACCGTCTCCGAAAACGCCGC+CGG - chr7_1:80406205-80406224 None:intergenic 65.0%
AGGAGACACCGAAGTGGCGG+TGG + chr7_1:80406249-80406268 Msa1042420:CDS 65.0%
!! GGTTGGGAAGGTAGCGGAGC+AGG + chr7_1:80406327-80406346 Msa1042420:CDS 65.0%
AAGCCATGTGCAGCCACGGC+TGG - chr7_1:80406558-80406577 None:intergenic 65.0%
GGCGAAGCCATGTGCAGCCA+CGG - chr7_1:80406562-80406581 None:intergenic 65.0%
ACCATGCCACCATCGGCCTG+TGG + chr7_1:80408676-80408695 Msa1042420:intron 65.0%
! ACCACAGGCCGATGGTGGCA+TGG - chr7_1:80408680-80408699 None:intergenic 65.0%
ATGCCACCATCGGCCTGTGG+TGG + chr7_1:80408679-80408698 Msa1042420:intron 65.0%
GTTCCACCACAGGCCGATGG+TGG - chr7_1:80408685-80408704 None:intergenic 65.0%
GGTCCCAAATTCGCGGCTGC+AGG - chr7_1:80409256-80409275 None:intergenic 65.0%
GCGGAGGAGCTTCATCGGCG+AGG + chr7_1:80405828-80405847 Msa1042420:CDS 70.0%
GTGCCCTATCCTCCGTGGCG+GGG - chr7_1:80406047-80406066 None:intergenic 70.0%
CGTGCCCTATCCTCCGTGGC+GGG - chr7_1:80406048-80406067 None:intergenic 70.0%
AACGCCGCCGGCATCACAGC+TGG - chr7_1:80406193-80406212 None:intergenic 70.0%
! GCCGGCGGCGTTTTCGGAGA+CGG + chr7_1:80406201-80406220 Msa1042420:CDS 70.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 80405413 80410891 80405413 ID=Msa1042420;Name=Msa1042420
chr7_1 mRNA 80405413 80410891 80405413 ID=Msa1042420-mRNA-1;Parent=Msa1042420;Name=Msa1042420-mRNA-1;_AED=0.27;_eAED=0.27;_QI=223|0.88|0.9|1|0.66|0.5|10|416|453
chr7_1 exon 80405413 80405542 80405413 ID=Msa1042420-mRNA-1:exon:21937;Parent=Msa1042420-mRNA-1
chr7_1 exon 80405563 80405628 80405563 ID=Msa1042420-mRNA-1:exon:21938;Parent=Msa1042420-mRNA-1
chr7_1 exon 80405710 80406399 80405710 ID=Msa1042420-mRNA-1:exon:21939;Parent=Msa1042420-mRNA-1
chr7_1 exon 80408066 80408164 80408066 ID=Msa1042420-mRNA-1:exon:21940;Parent=Msa1042420-mRNA-1
chr7_1 exon 80408253 80408318 80408253 ID=Msa1042420-mRNA-1:exon:21941;Parent=Msa1042420-mRNA-1
chr7_1 exon 80408435 80408500 80408435 ID=Msa1042420-mRNA-1:exon:21942;Parent=Msa1042420-mRNA-1
chr7_1 exon 80409082 80409474 80409082 ID=Msa1042420-mRNA-1:exon:21943;Parent=Msa1042420-mRNA-1
chr7_1 exon 80410067 80410130 80410067 ID=Msa1042420-mRNA-1:exon:21944;Parent=Msa1042420-mRNA-1
chr7_1 exon 80410385 80410499 80410385 ID=Msa1042420-mRNA-1:exon:21945;Parent=Msa1042420-mRNA-1
chr7_1 exon 80410580 80410891 80410580 ID=Msa1042420-mRNA-1:exon:21946;Parent=Msa1042420-mRNA-1
chr7_1 five_prime_UTR 80405413 80405542 80405413 ID=Msa1042420-mRNA-1:five_prime_utr;Parent=Msa1042420-mRNA-1
chr7_1 five_prime_UTR 80405563 80405628 80405563 ID=Msa1042420-mRNA-1:five_prime_utr;Parent=Msa1042420-mRNA-1
chr7_1 five_prime_UTR 80405710 80405736 80405710 ID=Msa1042420-mRNA-1:five_prime_utr;Parent=Msa1042420-mRNA-1
chr7_1 CDS 80405737 80406399 80405737 ID=Msa1042420-mRNA-1:cds;Parent=Msa1042420-mRNA-1
chr7_1 CDS 80408066 80408164 80408066 ID=Msa1042420-mRNA-1:cds;Parent=Msa1042420-mRNA-1
chr7_1 CDS 80408253 80408318 80408253 ID=Msa1042420-mRNA-1:cds;Parent=Msa1042420-mRNA-1
chr7_1 CDS 80408435 80408500 80408435 ID=Msa1042420-mRNA-1:cds;Parent=Msa1042420-mRNA-1
chr7_1 CDS 80409082 80409474 80409082 ID=Msa1042420-mRNA-1:cds;Parent=Msa1042420-mRNA-1
chr7_1 CDS 80410067 80410130 80410067 ID=Msa1042420-mRNA-1:cds;Parent=Msa1042420-mRNA-1
chr7_1 CDS 80410385 80410395 80410385 ID=Msa1042420-mRNA-1:cds;Parent=Msa1042420-mRNA-1
chr7_1 three_prime_UTR 80410396 80410499 80410396 ID=Msa1042420-mRNA-1:three_prime_utr;Parent=Msa1042420-mRNA-1
chr7_1 three_prime_UTR 80410580 80410891 80410580 ID=Msa1042420-mRNA-1:three_prime_utr;Parent=Msa1042420-mRNA-1
Gene Sequence

>Msa1042420

ATGGAAAACGGCCAAGTCGTTACACAGAGGCCAAACCACCGTCATCTGAAGAAACCACTGCCGGTGAAAAACTCCGACGATTCAACTCGCGGCGGAGGAGCTTCATCGGCGAGGGAGATTCGACCAGTAGAAAACTACAATCAATATCTCTTCATGCAAGAAAATGAAATGGCTTCATGGCTTCATTACGATGATTCTCCTTTCGAACAAACCTTTTCCACCGATTTCCTTAACCCGCCGCCGACGGTTAATAACAACAGTACAATACAAACTCCGACGTCGGTGGTTCCTTCTCGTCCTCCAATTTCCCCGCCACGGAGGATAGGGCACGTGCAGCCTGAGACACCGAACTTCGCGTACTTTGCGAAGCACGGTGTAAGAACCGAGCCAGGACCGTCGTCAATTTTGAACACTGCTGCGAGGGAATCAACAGTGGTGGATTCGTGTGATACACCAGCTGTGATGCCGGCGGCGTTTTCGGAGACGGTAAGAAGTTTAGCGGATCAAACGGAAGGAGACACCGAAGTGGCGGTGGTTTCGGCAACTTTTGATGAACCGGGCGGTTCAAGTAGCAGTGAAGAAGCTGAACCGGTTGGGAAGGTAGCGGAGCAGGACCGAAAGAGGAAGGGAGTAGAAGCGGAGGAATGGGAATATCAGAGCGAGGATGTTGATTTTGAATCTGCGGAAGCCCAAAAAATATCAGTGGATCATCTACAAAGAGATCTCGTGCTGCTGAGGTCCATAATCTCTCAGAAAGGGTTGAGGCGTCGTGATCGGATTAATGAAAAGATGAAAGCTCTGCAAGAACTTATACCTCGATCTAATAAGTCTGACAAAGCATCTATGCTGGATGAAGCAATTGATTACTTGAAGTCGCTGCAGTTACAAGTGCAGAGAGTACAACTTATGCAGATGATGTCCATGGGATGTGGCATGGTACCTATGATGTTTCCTGGAATCCAGCAGTATATGCCAACAGTTGGAATGGGAATGGGGATGGGTATGGAAATGGGAATAAACAGACCAGTAATGCCATTTCCCAATATGTTATCCGGTTCTGCTTTGCCTGCAGCCGCGAATTTGGGACCAAGGTTCGTGATGCCTCCTTTCCACATGCCGCATGTTCCTACACCTGGTTCATCCAGAATGCAAGCAGCAAATCAGGTAGATAATAATGTGATCACCTCAGCTGGAACACATGATTCAAATCAGTCACGTATCCCAAATTTCAGTGATCCTTATCAACAATATCTTGGACCCCACCAGATGCAGTTTCAATTGATGCAGAATCAAGCAATGAACCAACCAAATGTCAGCAGGCCTCTTGAGAAACCAGAAACCCGCCAGTCAGGAGATAAATGA
Protein sequence

>Msa1042420

MENGQVVTQRPNHRHLKKPLPVKNSDDSTRGGGASSAREIRPVENYNQYLFMQENEMASWLHYDDSPFEQTFSTDFLNPPPTVNNNSTIQTPTSVVPSRPPISPPRRIGHVQPETPNFAYFAKHGVRTEPGPSSILNTAARESTVVDSCDTPAVMPAAFSETVRSLADQTEGDTEVAVVSATFDEPGGSSSSEEAEPVGKVAEQDRKRKGVEAEEWEYQSEDVDFESAEAQKISVDHLQRDLVLLRSIISQKGLRRRDRINEKMKALQELIPRSNKSDKASMLDEAIDYLKSLQLQVQRVQLMQMMSMGCGMVPMMFPGIQQYMPTVGMGMGMGMEMGINRPVMPFPNMLSGSALPAAANLGPRFVMPPFHMPHVPTPGSSRMQAANQVDNNVITSAGTHDSNQSRIPNFSDPYQQYLGPHQMQFQLMQNQAMNQPNVSRPLEKPETRQSGDK*