Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299280 | sp|Q9SSG3|HIPL1_ARATH | 62.742 | 671 | 205 | 7 | 22 | 656 | 20 | 681 | 0.0 | 852 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299280 | A0A072V1D2 | 94.405 | 697 | 11 | 1 | 1 | 669 | 1 | 697 | 0.0 | 1343 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010150 | Msa1299280 | 0.801408 | 9.131357e-49 | -8.615850e-47 |
| Msa0021980 | Msa1299280 | -0.815608 | 8.471823e-52 | -8.615850e-47 |
| Msa0034100 | Msa1299280 | -0.839597 | 1.440884e-57 | -8.615850e-47 |
| Msa0036550 | Msa1299280 | 0.802292 | 6.012816e-49 | -8.615850e-47 |
| Msa0041780 | Msa1299280 | -0.810982 | 8.791583e-51 | -8.615850e-47 |
| Msa0050320 | Msa1299280 | -0.806213 | 9.174572e-50 | -8.615850e-47 |
| Msa0059880 | Msa1299280 | 0.837721 | 4.397951e-57 | -8.615850e-47 |
| Msa0099090 | Msa1299280 | -0.804644 | 1.956340e-49 | -8.615850e-47 |
| Msa0117300 | Msa1299280 | -0.811670 | 6.234276e-51 | -8.615850e-47 |
| Msa0608940 | Msa1299280 | -0.808293 | 3.325608e-50 | -8.615850e-47 |
| Msa0629220 | Msa1299280 | 0.820856 | 5.498101e-53 | -8.615850e-47 |
| Msa0649530 | Msa1299280 | -0.809375 | 1.952094e-50 | -8.615850e-47 |
| Msa0664130 | Msa1299280 | -0.801734 | 7.830435e-49 | -8.615850e-47 |
| Msa0682730 | Msa1299280 | 0.800225 | 1.592587e-48 | -8.615850e-47 |
| Msa0691140 | Msa1299280 | -0.803423 | 3.510668e-49 | -8.615850e-47 |
| Msa0691740 | Msa1299280 | -0.807835 | 4.163610e-50 | -8.615850e-47 |
| Msa0711240 | Msa1299280 | 0.836729 | 7.890940e-57 | -8.615850e-47 |
| Msa0738570 | Msa1299280 | 0.821699 | 3.513158e-53 | -8.615850e-47 |
| Msa0748980 | Msa1299280 | -0.804824 | 1.794070e-49 | -8.615850e-47 |
| Msa0756940 | Msa1299280 | -0.804448 | 2.150178e-49 | -8.615850e-47 |
| Msa0789410 | Msa1299280 | 0.801253 | 9.824506e-49 | -8.615850e-47 |
| Msa0803530 | Msa1299280 | -0.801313 | 9.551866e-49 | -8.615850e-47 |
| Msa0825520 | Msa1299280 | -0.808760 | 2.643162e-50 | -8.615850e-47 |
| Msa0834200 | Msa1299280 | -0.829898 | 3.978704e-55 | -8.615850e-47 |
| Msa0834240 | Msa1299280 | -0.820561 | 6.426026e-53 | -8.615850e-47 |
| Msa0835550 | Msa1299280 | -0.802391 | 5.736022e-49 | -8.615850e-47 |
| Msa0836510 | Msa1299280 | -0.809983 | 1.444795e-50 | -8.615850e-47 |
| Msa0128110 | Msa1299280 | -0.829234 | 5.769370e-55 | -8.615850e-47 |
| Msa0131090 | Msa1299280 | -0.851843 | 6.812854e-61 | -8.615850e-47 |
| Msa0148430 | Msa1299280 | -0.800926 | 1.146133e-48 | -8.615850e-47 |
| Msa0150910 | Msa1299280 | 0.824300 | 8.696187e-54 | -8.615850e-47 |
| Msa0154720 | Msa1299280 | -0.807272 | 5.479965e-50 | -8.615850e-47 |
| Msa0160650 | Msa1299280 | -0.832425 | 9.520586e-56 | -8.615850e-47 |
| Msa0184030 | Msa1299280 | -0.800238 | 1.583217e-48 | -8.615850e-47 |
| Msa0190670 | Msa1299280 | 0.809086 | 2.251233e-50 | -8.615850e-47 |
| Msa0225880 | Msa1299280 | -0.803127 | 4.043665e-49 | -8.615850e-47 |
| Msa1230190 | Msa1299280 | -0.818579 | 1.821043e-52 | -8.615850e-47 |
| Msa1259560 | Msa1299280 | 0.972230 | 1.986362e-134 | -8.615850e-47 |
| Msa1272770 | Msa1299280 | -0.814690 | 1.355095e-51 | -8.615850e-47 |
| Msa1299280 | Msa1323150 | 0.807253 | 5.531028e-50 | -8.615850e-47 |
| Msa1299280 | Msa1353280 | -0.803840 | 2.876549e-49 | -8.615850e-47 |
| Msa1299280 | Msa1368660 | -0.820346 | 7.200435e-53 | -8.615850e-47 |
| Msa1299280 | Msa1373560 | 0.816832 | 4.512453e-52 | -8.615850e-47 |
| Msa1299280 | Msa1381720 | -0.819828 | 9.459345e-53 | -8.615850e-47 |
| Msa1299280 | Msa1384620 | -0.808120 | 3.619392e-50 | -8.615850e-47 |
| Msa1299280 | Msa1388270 | -0.800511 | 1.392790e-48 | -8.615850e-47 |
| Msa1299280 | Msa1400290 | -0.803139 | 4.019478e-49 | -8.615850e-47 |
| Msa1299280 | Msa1401000 | -0.843300 | 1.525562e-58 | -8.615850e-47 |
| Msa1299280 | Msa1432250 | -0.821799 | 3.331042e-53 | -8.615850e-47 |
| Msa1299280 | Msa1433380 | -0.816508 | 5.332726e-52 | -8.615850e-47 |
| Msa1299280 | Msa1442070 | -0.807303 | 5.398739e-50 | -8.615850e-47 |
| Msa1299280 | Msa1445040 | 0.801607 | 8.312570e-49 | -8.615850e-47 |
| Msa1299280 | Msa1446220 | -0.805900 | 1.067682e-49 | -8.615850e-47 |
| Msa1299280 | Msa1450850 | -0.822954 | 1.796286e-53 | -8.615850e-47 |
| Msa1299280 | Msa1458530 | 0.803947 | 2.733764e-49 | -8.615850e-47 |
| Msa1299280 | Msa1459630 | -0.814872 | 1.234936e-51 | -8.615850e-47 |
| Msa1299280 | Msa1460530 | -0.828711 | 7.721958e-55 | -8.615850e-47 |
| Msa0373110 | Msa1299280 | -0.812880 | 3.393304e-51 | -8.615850e-47 |
| Msa0409250 | Msa1299280 | 0.814136 | 1.796545e-51 | -8.615850e-47 |
| Msa0424300 | Msa1299280 | 0.806239 | 9.060498e-50 | -8.615850e-47 |
| Msa0431940 | Msa1299280 | -0.818789 | 1.631496e-52 | -8.615850e-47 |
| Msa0436590 | Msa1299280 | -0.805399 | 1.360291e-49 | -8.615850e-47 |
| Msa0436600 | Msa1299280 | -0.806499 | 7.983978e-50 | -8.615850e-47 |
| Msa0453970 | Msa1299280 | 0.810205 | 1.294045e-50 | -8.615850e-47 |
| Msa0467480 | Msa1299280 | -0.801822 | 7.510840e-49 | -8.615850e-47 |
| Msa0999590 | Msa1299280 | -0.801652 | 8.139214e-49 | -8.615850e-47 |
| Msa1024350 | Msa1299280 | 0.802321 | 5.930461e-49 | -8.615850e-47 |
| Msa1031530 | Msa1299280 | -0.851496 | 8.547490e-61 | -8.615850e-47 |
| Msa1038110 | Msa1299280 | -0.822202 | 2.686626e-53 | -8.615850e-47 |
| Msa1046220 | Msa1299280 | 0.801658 | 8.114755e-49 | -8.615850e-47 |
| Msa1061760 | Msa1299280 | 0.837337 | 5.515700e-57 | -8.615850e-47 |
| Msa1061780 | Msa1299280 | 0.802685 | 4.989957e-49 | -8.615850e-47 |
| Msa1070630 | Msa1299280 | -0.807769 | 4.299746e-50 | -8.615850e-47 |
| Msa1071460 | Msa1299280 | -0.810542 | 1.094332e-50 | -8.615850e-47 |
| Msa1087380 | Msa1299280 | 0.841061 | 5.971356e-58 | -8.615850e-47 |
| Msa1101300 | Msa1299280 | -0.803734 | 3.026528e-49 | -8.615850e-47 |
| Msa0267710 | Msa1299280 | 0.826778 | 2.250561e-54 | -8.615850e-47 |
| Msa0274260 | Msa1299280 | 0.811646 | 6.310052e-51 | -8.615850e-47 |
| Msa0303920 | Msa1299280 | 0.806425 | 8.276930e-50 | -8.615850e-47 |
| Msa0343200 | Msa1299280 | -0.806953 | 6.403568e-50 | -8.615850e-47 |
| Msa0364010 | Msa1299280 | -0.803866 | 2.840824e-49 | -8.615850e-47 |
| Msa1107330 | Msa1299280 | 0.830083 | 3.585643e-55 | -8.615850e-47 |
| Msa1109880 | Msa1299280 | 0.805264 | 1.452116e-49 | -8.615850e-47 |
| Msa1111650 | Msa1299280 | 0.805043 | 1.614791e-49 | -8.615850e-47 |
| Msa1129660 | Msa1299280 | -0.841412 | 4.828122e-58 | -8.615850e-47 |
| Msa1138110 | Msa1299280 | 0.811519 | 6.722527e-51 | -8.615850e-47 |
| Msa1150860 | Msa1299280 | 0.832378 | 9.782701e-56 | -8.615850e-47 |
| Msa1158450 | Msa1299280 | -0.820078 | 8.296058e-53 | -8.615850e-47 |
| Msa1170840 | Msa1299280 | 0.811499 | 6.790751e-51 | -8.615850e-47 |
| Msa1171630 | Msa1299280 | 0.832032 | 1.191573e-55 | -8.615850e-47 |
| Msa1172070 | Msa1299280 | -0.803115 | 4.065556e-49 | -8.615850e-47 |
| Msa1173290 | Msa1299280 | 0.805924 | 1.055266e-49 | -8.615850e-47 |
| Msa1182530 | Msa1299280 | -0.813753 | 2.182218e-51 | -8.615850e-47 |
| Msa1194170 | Msa1299280 | 0.927072 | 1.953473e-91 | -8.615850e-47 |
| Msa1211130 | Msa1299280 | 0.864908 | 8.664737e-65 | -8.615850e-47 |
| Msa1214960 | Msa1299280 | 0.814900 | 1.217440e-51 | -8.615850e-47 |
| Msa0515930 | Msa1299280 | 0.805461 | 1.320457e-49 | -8.615850e-47 |
| Msa0520810 | Msa1299280 | -0.820374 | 7.095856e-53 | -8.615850e-47 |
| Msa0538450 | Msa1299280 | 0.816423 | 5.573314e-52 | -8.615850e-47 |
| Msa0538520 | Msa1299280 | 0.817661 | 2.936799e-52 | -8.615850e-47 |
| Msa0538650 | Msa1299280 | 0.816471 | 5.437629e-52 | -8.615850e-47 |
| Msa0547200 | Msa1299280 | 0.801982 | 6.963560e-49 | -8.615850e-47 |
| Msa0555510 | Msa1299280 | -0.802526 | 5.380709e-49 | -8.615850e-47 |
| Msa0579170 | Msa1299280 | -0.800658 | 1.299698e-48 | -8.615850e-47 |
| Msa0594320 | Msa1299280 | 0.800669 | 1.292840e-48 | -8.615850e-47 |
| Msa0859230 | Msa1299280 | 0.804462 | 2.135927e-49 | -8.615850e-47 |
| Msa0861480 | Msa1299280 | -0.812918 | 3.329235e-51 | -8.615850e-47 |
| Msa0864730 | Msa1299280 | -0.812615 | 3.877199e-51 | -8.615850e-47 |
| Msa0864750 | Msa1299280 | -0.812433 | 4.250499e-51 | -8.615850e-47 |
| Msa0896920 | Msa1299280 | 0.806070 | 9.835524e-50 | -8.615850e-47 |
| Msa0899080 | Msa1299280 | -0.813359 | 2.663714e-51 | -8.615850e-47 |
| Msa0902340 | Msa1299280 | 0.814022 | 1.904040e-51 | -8.615850e-47 |
| Msa0933610 | Msa1299280 | 0.814193 | 1.745379e-51 | -8.615850e-47 |
| Msa0951060 | Msa1299280 | 0.805625 | 1.219876e-49 | -8.615850e-47 |
| Msa0967260 | Msa1299280 | -0.820536 | 6.513554e-53 | -8.615850e-47 |
| Msa0970790 | Msa1299280 | 0.806059 | 9.887142e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299280 | MtrunA17_Chr4g0059831 | 93.697 | 476 | 2 | 1 | 222 | 669 | 1 | 476 | 0.0 | 913 |
| Msa1299280 | MtrunA17_Chr4g0059851 | 96.721 | 183 | 6 | 0 | 1 | 183 | 1 | 183 | 5.72e-121 | 358 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299280 | AT1G74790.1 | 62.742 | 671 | 205 | 7 | 22 | 656 | 20 | 681 | 0.0 | 852 |
| Msa1299280 | AT5G62630.1 | 57.918 | 682 | 228 | 9 | 11 | 647 | 10 | 677 | 0.0 | 769 |
| Msa1299280 | AT5G39970.1 | 54.726 | 656 | 244 | 11 | 23 | 643 | 22 | 659 | 0.0 | 726 |
| Msa1299280 | AT5G39970.3 | 53.662 | 669 | 250 | 12 | 10 | 643 | 3 | 646 | 0.0 | 717 |
| Msa1299280 | AT5G39970.2 | 54.364 | 550 | 203 | 9 | 23 | 540 | 22 | 555 | 0.0 | 615 |
Find 207 sgRNAs with CRISPR-Local
Find 354 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGGCCGTTGTTTGCAAAATT+TGG | 0.093490 | 8_3:+60384946 | None:intergenic |
| ATCCTTCATTCTTGTTTATT+TGG | 0.094526 | 8_3:+60383392 | None:intergenic |
| CTCCCTTCTGTTCCTACTTT+TGG | 0.109708 | 8_3:-60386692 | Msa1299280:CDS |
| GAATTGGATTTATGGATTTA+AGG | 0.142580 | 8_3:+60383440 | None:intergenic |
| GGCTTATGCCTTGAGAAAAT+TGG | 0.146095 | 8_3:-60385177 | Msa1299280:CDS |
| AATCCTAAGGCCCATATTTC+AGG | 0.198218 | 8_3:+60384018 | None:intergenic |
| GTAAACAGCTCGCCTGAATA+AGG | 0.226039 | 8_3:+60385531 | None:intergenic |
| TCCTTCATTCTTGTTTATTT+GGG | 0.235668 | 8_3:+60383393 | None:intergenic |
| AAAGCATACTGATTGATTAT+TGG | 0.243520 | 8_3:+60385251 | None:intergenic |
| ACAAATTGGTCATATCAATT+TGG | 0.270934 | 8_3:-60382206 | Msa1299280:three_prime_UTR |
| AAGATCTGGAGCCTGAAATA+TGG | 0.289679 | 8_3:-60384029 | Msa1299280:CDS |
| ACCCATTTGAGTAGCTTCTA+TGG | 0.290723 | 8_3:-60382420 | Msa1299280:CDS |
| GCAGCTTTCATCTTTATTGT+TGG | 0.292030 | 8_3:-60382385 | Msa1299280:CDS |
| TAGAGGTGTGACCCTTATTC+AGG | 0.292454 | 8_3:-60385543 | Msa1299280:CDS |
| ATGACTTCTGCTCTGAAGTA+TGG | 0.295903 | 8_3:-60385425 | Msa1299280:CDS |
| CGAGTCAAATGGGGAAAGTT+TGG | 0.296402 | 8_3:-60385095 | Msa1299280:CDS |
| AAGTTAGTAAACTTGGACTT+TGG | 0.298827 | 8_3:-60384095 | Msa1299280:CDS |
| GTTTATATTCTTGCAAGTTC+TGG | 0.302709 | 8_3:-60382543 | Msa1299280:CDS |
| TCTTTACGCGGGTGCGCTTT+GGG | 0.310364 | 8_3:-60382724 | Msa1299280:CDS |
| CCACCGTGTTGAGATGTAAA+TGG | 0.312281 | 8_3:+60384585 | None:intergenic |
| ATAATCAATCAGTATGCTTT+GGG | 0.312395 | 8_3:-60385248 | Msa1299280:CDS |
| CTGAATTTGTTCATCGTGTA+TGG | 0.314462 | 8_3:+60386427 | None:intergenic |
| AATTGGATTTATGGATTTAA+GGG | 0.316481 | 8_3:+60383441 | None:intergenic |
| TGTCCTCCTGATCCTTCTTC+AGG | 0.320055 | 8_3:+60385060 | None:intergenic |
| GATTCTAAAATACTACAAAT+TGG | 0.345835 | 8_3:-60382220 | Msa1299280:three_prime_UTR |
| TTACTAGTACCTATCTTTGA+TGG | 0.350428 | 8_3:+60384838 | None:intergenic |
| TTATTCAGGCGAGCTGTTTA+CGG | 0.352655 | 8_3:-60385529 | Msa1299280:CDS |
| ATCACAAAAGGTGGAAACTA+TGG | 0.353305 | 8_3:-60383526 | Msa1299280:CDS |
| GAATGGATCTTATCTCAATA+TGG | 0.354342 | 8_3:-60385154 | Msa1299280:CDS |
| CACGGTGGTCAGATACTCTT+TGG | 0.356198 | 8_3:-60384570 | Msa1299280:CDS |
| AATAATCAATCAGTATGCTT+TGG | 0.356937 | 8_3:-60385249 | Msa1299280:CDS |
| TGATACTCAATTTGGAATGA+TGG | 0.358990 | 8_3:-60384983 | Msa1299280:CDS |
| AGTTAGTAAACTTGGACTTT+GGG | 0.361263 | 8_3:-60384094 | Msa1299280:CDS |
| GCTTTGCAATTCTGCCATTC+CGG | 0.363882 | 8_3:-60385478 | Msa1299280:CDS |
| CTATGGCTGGCGTGTATATG+AGG | 0.364427 | 8_3:-60383509 | Msa1299280:CDS |
| ATGACTGATCCTTGCATGTT+TGG | 0.370498 | 8_3:-60383334 | Msa1299280:CDS |
| TTAACTGTAATAAAGATAAA+TGG | 0.372614 | 8_3:-60384909 | Msa1299280:CDS |
| CCTTGTAAGGAAGGGGAAAA+TGG | 0.377761 | 8_3:+60385369 | None:intergenic |
| CATTCTTGTTTATTTGGGAA+TGG | 0.393620 | 8_3:+60383398 | None:intergenic |
| GCTTATGCCTTGAGAAAATT+GGG | 0.396776 | 8_3:-60385176 | Msa1299280:CDS |
| TTCATTCAGTTTGGTTGCAT+TGG | 0.399995 | 8_3:+60385320 | None:intergenic |
| AAGAGCTGGAAGGGAGCTAC+TGG | 0.401179 | 8_3:+60382605 | None:intergenic |
| CGCGTTCTTCTCGAGTCAAA+TGG | 0.401407 | 8_3:-60385106 | Msa1299280:CDS |
| TCCACTATTTGAAGGATCTT+CGG | 0.407251 | 8_3:+60382695 | None:intergenic |
| AGATCTTTATCTTCACTGAA+TGG | 0.411884 | 8_3:+60384045 | None:intergenic |
| AGAAGGATCAGGAGGACAAT+TGG | 0.415576 | 8_3:-60385055 | Msa1299280:CDS |
| GAAGGATCAGCATCAATTAC+CGG | 0.415592 | 8_3:-60383376 | Msa1299280:CDS |
| TTGCCACAGTTCATTCAGTT+TGG | 0.416205 | 8_3:+60385311 | None:intergenic |
| TTGAATAAAAGAAGTAGAAG+AGG | 0.416531 | 8_3:-60386896 | Msa1299280:five_prime_UTR |
| ATTGCAGAATATACTGCTAA+TGG | 0.420026 | 8_3:-60384784 | Msa1299280:CDS |
| AGTAGCTCCCTTCCAGCTCT+TGG | 0.420155 | 8_3:-60382603 | Msa1299280:CDS |
| GTGAAATTTCCACTATTTGA+AGG | 0.422937 | 8_3:+60382687 | None:intergenic |
| AAATGCGTACCGAGGATGGC+TGG | 0.424046 | 8_3:+60384752 | None:intergenic |
| GGAATGGTTGTATCCTGCTA+TGG | 0.426023 | 8_3:+60383414 | None:intergenic |
| TTTGATAACTAGTATATAAG+TGG | 0.427358 | 8_3:-60382248 | Msa1299280:three_prime_UTR |
| AAGTATAAATACCCATCATT+AGG | 0.427362 | 8_3:+60384546 | None:intergenic |
| TCCACCTCCTTGACCTTGTA+AGG | 0.427515 | 8_3:+60385356 | None:intergenic |
| TGTGGAAAGAACAGTCTTCA+TGG | 0.435157 | 8_3:+60386732 | None:intergenic |
| TGTAATAAAGATAAATGGTC+TGG | 0.438396 | 8_3:-60384904 | Msa1299280:CDS |
| ATCCATAGAAGCTACTCAAA+TGG | 0.438891 | 8_3:+60382418 | None:intergenic |
| GAGCCTGAAATATGGGCCTT+AGG | 0.440881 | 8_3:-60384021 | Msa1299280:CDS |
| CAAGTACTTCCATTGTTGTA+AGG | 0.443580 | 8_3:+60386458 | None:intergenic |
| TTTGATTGAGAAGAATTTGC+CGG | 0.444403 | 8_3:+60385459 | None:intergenic |
| AGTTAAACGAAGCGAAGAAT+CGG | 0.448068 | 8_3:+60384926 | None:intergenic |
| TTGGTTGCATTGGTATTAGC+TGG | 0.449607 | 8_3:+60385330 | None:intergenic |
| ACCGAAGATCCTTCAAATAG+TGG | 0.450164 | 8_3:-60382696 | Msa1299280:CDS |
| TCACTGAATGGATTATCCTT+AGG | 0.453217 | 8_3:+60384057 | None:intergenic |
| GGTGCTGAATCACACGGTAT+AGG | 0.460431 | 8_3:+60382627 | None:intergenic |
| GAATGGTTGTATCCTGCTAT+GGG | 0.460676 | 8_3:+60383415 | None:intergenic |
| AGTGTGGTATTCAAGGTAAA+GGG | 0.461471 | 8_3:+60386491 | None:intergenic |
| TAAACAGCTCGCCTGAATAA+GGG | 0.463660 | 8_3:+60385532 | None:intergenic |
| GCGTTCTTCTCGAGTCAAAT+GGG | 0.465575 | 8_3:-60385105 | Msa1299280:CDS |
| GAGTGTGGTATTCAAGGTAA+AGG | 0.466980 | 8_3:+60386490 | None:intergenic |
| TCCATAGAAGCTACTCAAAT+GGG | 0.467430 | 8_3:+60382419 | None:intergenic |
| TCATTGTTACGTAATGCAAC+AGG | 0.467645 | 8_3:+60385219 | None:intergenic |
| GATACTCAATTTGGAATGAT+GGG | 0.468125 | 8_3:-60384982 | Msa1299280:CDS |
| GGGAAGGTAAGGTCAGGCCG+TGG | 0.469206 | 8_3:-60386990 | None:intergenic |
| AAATTTGAGTGTGGTATTCA+AGG | 0.469405 | 8_3:+60386484 | None:intergenic |
| AATTGTGATCCATCAAAGAT+AGG | 0.471816 | 8_3:-60384847 | Msa1299280:CDS |
| ATGAAGACTGTTCTTTCCAC+AGG | 0.475816 | 8_3:-60386730 | Msa1299280:CDS |
| GGCAAATTCTTCTCAATCAA+AGG | 0.479253 | 8_3:-60385457 | Msa1299280:CDS |
| ATACTCTTTGGACCTAATGA+TGG | 0.480182 | 8_3:-60384558 | Msa1299280:CDS |
| TGAATAAAAGAAGTAGAAGA+GGG | 0.480776 | 8_3:-60386895 | Msa1299280:five_prime_UTR |
| GCATCAGAAGTTAGTAAACT+TGG | 0.481138 | 8_3:-60384102 | Msa1299280:CDS |
| TCCTTACAAGGTCAAGGAGG+TGG | 0.481994 | 8_3:-60385357 | Msa1299280:CDS |
| AATCCAAAAGTAGGAACAGA+AGG | 0.482586 | 8_3:+60386689 | None:intergenic |
| TTACACTTGCTCACAGGAAA+AGG | 0.483859 | 8_3:-60382487 | Msa1299280:CDS |
| CCAAGGATTTCTTAATCCTA+AGG | 0.484371 | 8_3:+60384005 | None:intergenic |
| AGATCTGGAGCCTGAAATAT+GGG | 0.484427 | 8_3:-60384028 | Msa1299280:CDS |
| AACGCGCGGTTTGAGCCATC+AGG | 0.489900 | 8_3:+60385123 | None:intergenic |
| CTTATATACTAGTTATCAAA+AGG | 0.489909 | 8_3:+60382251 | None:intergenic |
| GGAAGGTAAGGTCAGGCCGT+GGG | 0.490121 | 8_3:-60386989 | None:intergenic |
| ATTCAGTGAAGATAAAGATC+TGG | 0.490361 | 8_3:-60384043 | Msa1299280:CDS |
| CAAGTGTAACTGCAGCGACT+TGG | 0.493915 | 8_3:+60382501 | None:intergenic |
| GATAAATGGTCTGGCTGCAA+TGG | 0.494029 | 8_3:-60384895 | Msa1299280:CDS |
| AATCGTGTGCACAGCTGAAA+GGG | 0.494341 | 8_3:+60382652 | None:intergenic |
| AATATTCTTCTCACCTCAGT+TGG | 0.497203 | 8_3:+60384621 | None:intergenic |
| CACCGGGTCCCAGCCATCCT+CGG | 0.497508 | 8_3:-60384761 | Msa1299280:intron |
| TATCAGATACATTCATCTGT+TGG | 0.497663 | 8_3:+60386396 | None:intergenic |
| CAAAGCACGGGAACTGATCT+CGG | 0.501259 | 8_3:+60385495 | None:intergenic |
| TCCCCTTCCTTACAAGGTCA+AGG | 0.506555 | 8_3:-60385363 | Msa1299280:CDS |
| TGAGAAGGAGAAGGAGAAGG+AGG | 0.507214 | 8_3:+60382447 | None:intergenic |
| GAAAAGATGTATCCAAGAGC+TGG | 0.508362 | 8_3:+60382591 | None:intergenic |
| GAATATACTGCTAATGGCAC+CGG | 0.510299 | 8_3:-60384778 | Msa1299280:CDS |
| TTAAGGGATGTATTTCCTCC+AGG | 0.512084 | 8_3:+60383457 | None:intergenic |
| TGGGTATTTATACTTCATGA+TGG | 0.512223 | 8_3:-60384538 | Msa1299280:CDS |
| TGATTTCAAAAGTGAGGCAC+AGG | 0.514224 | 8_3:+60386370 | None:intergenic |
| GGTGACTCTGTAGTAGTGAA+TGG | 0.514388 | 8_3:+60383478 | None:intergenic |
| GAAAGAACAGTCTTCATGGC+AGG | 0.518357 | 8_3:+60386736 | None:intergenic |
| TTGAGAAGAATTTGCCGGAA+TGG | 0.521295 | 8_3:+60385464 | None:intergenic |
| TTGGCAACTATTCCTGAAGA+AGG | 0.522185 | 8_3:-60385072 | Msa1299280:CDS |
| ACTATTCCTGAAGAAGGATC+AGG | 0.522978 | 8_3:-60385066 | Msa1299280:CDS |
| AATATGGTTGCTCATCCTGA+TGG | 0.523113 | 8_3:-60385138 | Msa1299280:CDS |
| TCCCAAATAAACAAGAATGA+AGG | 0.524278 | 8_3:-60383394 | Msa1299280:CDS |
| TGCCTTGAGAAAATTGGGAA+TGG | 0.524502 | 8_3:-60385171 | Msa1299280:CDS |
| TTATACTTCATGATGGGAGA+TGG | 0.525044 | 8_3:-60384531 | Msa1299280:CDS |
| CCTCCTTGACCTTGTAAGGA+AGG | 0.527037 | 8_3:+60385360 | None:intergenic |
| CCTTAGGATTAAGAAATCCT+TGG | 0.528645 | 8_3:-60384005 | Msa1299280:CDS |
| GCATGAGAAGGAGAAGGAGA+AGG | 0.529029 | 8_3:+60382444 | None:intergenic |
| TTTCTCAAGGCATAAGCCAT+GGG | 0.529664 | 8_3:+60385182 | None:intergenic |
| ATGGTTGTATCCTGCTATGG+GGG | 0.535626 | 8_3:+60383417 | None:intergenic |
| CACCGTGTTGAGATGTAAAT+GGG | 0.536248 | 8_3:+60384586 | None:intergenic |
| GAGGTGGATCTCATCACAAA+AGG | 0.536322 | 8_3:-60383538 | Msa1299280:CDS |
| CTCAAATGGGTTGCATGAGA+AGG | 0.539780 | 8_3:+60382432 | None:intergenic |
| TACCGAGGATGGCTGGGACC+CGG | 0.540836 | 8_3:+60384759 | None:intergenic |
| GGGTAGCTACTCAATTCCTA+AGG | 0.541434 | 8_3:-60384073 | Msa1299280:CDS |
| CCGCGTAAAGATCAGCATAC+AGG | 0.543963 | 8_3:+60382736 | None:intergenic |
| CTCCTTGACCTTGTAAGGAA+GGG | 0.545146 | 8_3:+60385361 | None:intergenic |
| GGGTATTTATACTTCATGAT+GGG | 0.547309 | 8_3:-60384537 | Msa1299280:CDS |
| TTCTTCTCAATCAAAGGCAT+CGG | 0.554545 | 8_3:-60385451 | Msa1299280:CDS |
| GATGTATCCAAGAGCTGGAA+GGG | 0.554726 | 8_3:+60382596 | None:intergenic |
| GAATCGTGTGCACAGCTGAA+AGG | 0.555049 | 8_3:+60382651 | None:intergenic |
| TCCTTGACCTTGTAAGGAAG+GGG | 0.555746 | 8_3:+60385362 | None:intergenic |
| AAGGATCAGCATCAATTACC+GGG | 0.560639 | 8_3:-60383375 | Msa1299280:CDS |
| GCAGGATCTTTATGAAGAGG+TGG | 0.561327 | 8_3:-60383554 | Msa1299280:intron |
| TGACTTCTGCTCTGAAGTAT+GGG | 0.561516 | 8_3:-60385424 | Msa1299280:CDS |
| TCAAATGGGGAAAGTTTGGT+TGG | 0.561969 | 8_3:-60385091 | Msa1299280:CDS |
| AGCACTTACATCAAGAGGGT+TGG | 0.562742 | 8_3:-60386962 | Msa1299280:five_prime_UTR |
| TCAAAGATAGGTACTAGTAA+TGG | 0.562846 | 8_3:-60384835 | Msa1299280:CDS |
| AATGCGTACCGAGGATGGCT+GGG | 0.565129 | 8_3:+60384753 | None:intergenic |
| GCAGGCGCCAAAGAATGAAA+AGG | 0.565230 | 8_3:+60386754 | None:intergenic |
| ATGGCAGAATTGCAAAGCAC+GGG | 0.566834 | 8_3:+60385483 | None:intergenic |
| TACTCTTTGGACCTAATGAT+GGG | 0.568455 | 8_3:-60384557 | Msa1299280:CDS |
| CTGATCCTTGCATGTTTGGA+AGG | 0.568512 | 8_3:-60383330 | Msa1299280:intron |
| CTGCAGTTACACTTGCTCAC+AGG | 0.577089 | 8_3:-60382493 | Msa1299280:CDS |
| CAAAAGGTGGAAACTATGGC+TGG | 0.578685 | 8_3:-60383522 | Msa1299280:CDS |
| TGATCAGTTAGATCAACAAA+GGG | 0.581281 | 8_3:+60385015 | None:intergenic |
| ATCAATCAGTATGCTTTGGG+GGG | 0.581486 | 8_3:-60385245 | Msa1299280:CDS |
| TTTGCAGGATCTTTATGAAG+AGG | 0.581556 | 8_3:-60383557 | Msa1299280:intron |
| ATAACTAGTATATAAGTGGA+TGG | 0.586414 | 8_3:-60382244 | Msa1299280:three_prime_UTR |
| TTGATCAGTTAGATCAACAA+AGG | 0.586446 | 8_3:+60385014 | None:intergenic |
| CCTGTATGCTGATCTTTACG+CGG | 0.587393 | 8_3:-60382736 | Msa1299280:CDS |
| TACTTCATGATGGGAGATGG+AGG | 0.588622 | 8_3:-60384528 | Msa1299280:CDS |
| AATGGTTGTATCCTGCTATG+GGG | 0.592212 | 8_3:+60383416 | None:intergenic |
| GAAGGTAAGGTCAGGCCGTG+GGG | 0.592221 | 8_3:-60386988 | None:intergenic |
| AATGGCAGAATTGCAAAGCA+CGG | 0.592355 | 8_3:+60385482 | None:intergenic |
| GTTAGTAAACTTGGACTTTG+GGG | 0.593490 | 8_3:-60384093 | Msa1299280:CDS |
| AATCAATCAGTATGCTTTGG+GGG | 0.596322 | 8_3:-60385246 | Msa1299280:CDS |
| AAGTTGAAGAATCCAAAAGT+AGG | 0.598397 | 8_3:+60386680 | None:intergenic |
| TTTGAAATCAATACTTTGTG+CGG | 0.598518 | 8_3:-60386357 | Msa1299280:intron |
| AAGTATTGATTTCAAAAGTG+AGG | 0.602252 | 8_3:+60386364 | None:intergenic |
| AAACATGCAAGGATCAGTCA+TGG | 0.603030 | 8_3:+60383336 | None:intergenic |
| GGCACAGCACTTACATCAAG+AGG | 0.606837 | 8_3:-60386967 | Msa1299280:five_prime_UTR |
| GTGAGAAGAATATTTACCAT+GGG | 0.612605 | 8_3:-60384612 | Msa1299280:CDS |
| TTCATGATGGGAGATGGAGG+AGG | 0.613543 | 8_3:-60384525 | Msa1299280:intron |
| GTGGATCTCATCACAAAAGG+TGG | 0.614554 | 8_3:-60383535 | Msa1299280:CDS |
| TGGGTTGCATGAGAAGGAGA+AGG | 0.614869 | 8_3:+60382438 | None:intergenic |
| TATGGCTGGCGTGTATATGA+GGG | 0.615153 | 8_3:-60383508 | Msa1299280:CDS |
| AGATGTATCCAAGAGCTGGA+AGG | 0.615410 | 8_3:+60382595 | None:intergenic |
| AATATACTGCTAATGGCACC+GGG | 0.617544 | 8_3:-60384777 | Msa1299280:CDS |
| GAATCAAAACTGCATCGCCA+AGG | 0.619294 | 8_3:+60383988 | None:intergenic |
| TCAAGGCATAAGCCATGGGG+AGG | 0.619341 | 8_3:+60385186 | None:intergenic |
| ATACTTGAGTCAACACATAG+AGG | 0.625014 | 8_3:+60386652 | None:intergenic |
| TCAATCAGTATGCTTTGGGG+GGG | 0.625661 | 8_3:-60385244 | Msa1299280:CDS |
| GATGTAAGTGCTGTGCCCCA+CGG | 0.627997 | 8_3:+60386973 | None:intergenic |
| TTCACTACTACAGAGTCACC+TGG | 0.628037 | 8_3:-60383475 | Msa1299280:CDS |
| CAGTACCTTCCAAACATGCA+AGG | 0.628525 | 8_3:+60383325 | None:intergenic |
| TAATCAATCAGTATGCTTTG+GGG | 0.629409 | 8_3:-60385247 | Msa1299280:CDS |
| AGAGCTGGAAGGGAGCTACT+GGG | 0.631308 | 8_3:+60382606 | None:intergenic |
| GTAGAAATGCGTACCGAGGA+TGG | 0.634150 | 8_3:+60384748 | None:intergenic |
| CAAGGCATAAGCCATGGGGA+GGG | 0.635947 | 8_3:+60385187 | None:intergenic |
| GGTGAGAAGAATATTTACCA+TGG | 0.637027 | 8_3:-60384613 | Msa1299280:CDS |
| GTAAGGACAAAATTTGAGTG+TGG | 0.639534 | 8_3:+60386475 | None:intergenic |
| GAGACTATTATCCCTCCCCA+TGG | 0.639990 | 8_3:-60385198 | Msa1299280:CDS |
| TGGTTGTATCCTGCTATGGG+GGG | 0.641288 | 8_3:+60383418 | None:intergenic |
| ATCCAAAAGTAGGAACAGAA+GGG | 0.641499 | 8_3:+60386690 | None:intergenic |
| ACTATTTGAAGGATCTTCGG+TGG | 0.642163 | 8_3:+60382698 | None:intergenic |
| AGATGTAAATGGGAGTCCCA+TGG | 0.648481 | 8_3:+60384596 | None:intergenic |
| AGCGACTTGGACGAACAACT+CGG | 0.648898 | 8_3:+60382514 | None:intergenic |
| CTGTATGCTGATCTTTACGC+GGG | 0.649982 | 8_3:-60382735 | Msa1299280:CDS |
| GGATCGATAAACATATCCCC+CGG | 0.650551 | 8_3:+60383357 | None:intergenic |
| CTCCCATTTACATCTCAACA+CGG | 0.653139 | 8_3:-60384588 | Msa1299280:CDS |
| CGTTCTTCTCGAGTCAAATG+GGG | 0.658120 | 8_3:-60385104 | Msa1299280:CDS |
| ATTCCTGAAGAAGGATCAGG+AGG | 0.666234 | 8_3:-60385063 | Msa1299280:CDS |
| TACAAGTGCTAAACCAACTG+AGG | 0.669482 | 8_3:-60384634 | Msa1299280:CDS |
| TTCTCAAGGCATAAGCCATG+GGG | 0.670920 | 8_3:+60385183 | None:intergenic |
| CACGGGAACTGATCTCGGTG+TGG | 0.672507 | 8_3:+60385500 | None:intergenic |
| CCTTCCTTACAAGGTCAAGG+AGG | 0.681764 | 8_3:-60385360 | Msa1299280:CDS |
| AGGATCAGCATCAATTACCG+GGG | 0.688826 | 8_3:-60383374 | Msa1299280:CDS |
| GCACAGCACTTACATCAAGA+GGG | 0.689819 | 8_3:-60386966 | Msa1299280:five_prime_UTR |
| ATAACAGTTTGATATTGACA+CGG | 0.693697 | 8_3:+60384805 | None:intergenic |
| CTACTGGGTGCTGAATCACA+CGG | 0.700186 | 8_3:+60382621 | None:intergenic |
| GGATCAGCATCAATTACCGG+GGG | 0.710549 | 8_3:-60383373 | Msa1299280:CDS |
| CAACCAAACTGAATGAACTG+TGG | 0.737606 | 8_3:-60385314 | Msa1299280:CDS |
| TTTGACTCGAGAAGAACGCG+CGG | 0.754652 | 8_3:+60385109 | None:intergenic |
| ACTACTACAGAGTCACCTGG+AGG | 0.758418 | 8_3:-60383472 | Msa1299280:CDS |
| CCATTTACATCTCAACACGG+TGG | 0.793402 | 8_3:-60384585 | Msa1299280:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAACTGAAAATTGATATT+TGG | - | chr8_3:60382312-60382331 | Msa1299280:three_prime_UTR | 15.0% |
| !! | TGAAAAACCAAAAAAAAAAA+AGG | + | chr8_3:60382550-60382569 | None:intergenic | 15.0% |
| !!! | TGAATATATACTTTTTCTTT+AGG | + | chr8_3:60382865-60382884 | None:intergenic | 15.0% |
| !!! | AAAGAAAAAGTATATATTCA+AGG | - | chr8_3:60382865-60382884 | Msa1299280:intron | 15.0% |
| !!! | GATAAACAAATCTTTTAAAA+GGG | + | chr8_3:60383002-60383021 | None:intergenic | 15.0% |
| !!! | CAATTGATAGTTATTAATAA+GGG | + | chr8_3:60383081-60383100 | None:intergenic | 15.0% |
| !! | TTAACTGTAATAAAGATAAA+TGG | - | chr8_3:60384243-60384262 | Msa1299280:intron | 15.0% |
| !! | TTATTAAAAGTTTATGATTG+AGG | + | chr8_3:60385526-60385545 | None:intergenic | 15.0% |
| !!! | TTTCCATCCTTTTTTTTTTT+TGG | - | chr8_3:60382540-60382559 | Msa1299280:CDS | 20.0% |
| !! | AAACCAAAAAAAAAAAAGGA+TGG | + | chr8_3:60382546-60382565 | None:intergenic | 20.0% |
| !!! | GGATAAACAAATCTTTTAAA+AGG | + | chr8_3:60383003-60383022 | None:intergenic | 20.0% |
| !!! | TTTGTACAGTCTTATATTAA+GGG | + | chr8_3:60383024-60383043 | None:intergenic | 20.0% |
| !!! | ATTTGTACAGTCTTATATTA+AGG | + | chr8_3:60383025-60383044 | None:intergenic | 20.0% |
| !! | TTATTAATAAGGGATGTATT+TGG | + | chr8_3:60383071-60383090 | None:intergenic | 20.0% |
| !!! | CCAATTGATAGTTATTAATA+AGG | + | chr8_3:60383082-60383101 | None:intergenic | 20.0% |
| !! | CCTTATTAATAACTATCAAT+TGG | - | chr8_3:60383079-60383098 | Msa1299280:intron | 20.0% |
| !!! | GTTTATTTTGATACTCAATT+TGG | - | chr8_3:60384161-60384180 | Msa1299280:intron | 20.0% |
| !! | AAACTATTGTTTCATATGTA+TGG | + | chr8_3:60384431-60384450 | None:intergenic | 20.0% |
| !! | ATGAAACAATAGTTTCTATA+AGG | - | chr8_3:60384436-60384455 | Msa1299280:intron | 20.0% |
| !! | TAGAACTATCTAATCATTAT+CGG | - | chr8_3:60384485-60384504 | Msa1299280:intron | 20.0% |
| !!! | TTGGTAGAACATTTTATAAA+AGG | + | chr8_3:60384887-60384906 | None:intergenic | 20.0% |
| !! | TAAAATGTTCTACCAATAAT+TGG | - | chr8_3:60384891-60384910 | Msa1299280:CDS | 20.0% |
| !! | AAATATAATTGTCAATAGTG+AGG | + | chr8_3:60385012-60385031 | None:intergenic | 20.0% |
| !!! | ATTCTTTTTGTTCTCTTAAA+CGG | + | chr8_3:60385465-60385484 | None:intergenic | 20.0% |
| !!! | AACTTTTAATAACTTCTACA+AGG | - | chr8_3:60385534-60385553 | Msa1299280:CDS | 20.0% |
| !! | AATTGGATTTATGGATTTAA+GGG | + | chr8_3:60385714-60385733 | None:intergenic | 20.0% |
| !!! | TCATCTTAAAAATTTTGGTT+AGG | + | chr8_3:60386006-60386025 | None:intergenic | 20.0% |
| !!! | TGAACTCATCTTAAAAATTT+TGG | + | chr8_3:60386011-60386030 | None:intergenic | 20.0% |
| !! | CTTATATACTAGTTATCAAA+AGG | + | chr8_3:60386904-60386923 | None:intergenic | 20.0% |
| !!! | TTTGATAACTAGTATATAAG+TGG | - | chr8_3:60386904-60386923 | Msa1299280:five_prime_UTR | 20.0% |
| !!! | GATTCTAAAATACTACAAAT+TGG | - | chr8_3:60386932-60386951 | Msa1299280:five_prime_UTR | 20.0% |
| ! | TTGAATAAAAGAAGTAGAAG+AGG | - | chr8_3:60382256-60382275 | Msa1299280:three_prime_UTR | 25.0% |
| ! | TGAATAAAAGAAGTAGAAGA+GGG | - | chr8_3:60382257-60382276 | Msa1299280:three_prime_UTR | 25.0% |
| !! | ATAGTAACCTTTTCATTCTT+TGG | - | chr8_3:60382391-60382410 | Msa1299280:CDS | 25.0% |
| !! | AAATTTTGTCCTTACAACAA+TGG | - | chr8_3:60382685-60382704 | Msa1299280:CDS | 25.0% |
| !!! | AAGTATTGATTTCAAAAGTG+AGG | + | chr8_3:60382791-60382810 | None:intergenic | 25.0% |
| !! | TTTGAAATCAATACTTTGTG+CGG | - | chr8_3:60382795-60382814 | Msa1299280:intron | 25.0% |
| !! | ACAGCATCATATTCTTTTAT+AGG | - | chr8_3:60382924-60382943 | Msa1299280:intron | 25.0% |
| ! | ATATGCATAAAAAGTTCCAA+AGG | - | chr8_3:60383206-60383225 | Msa1299280:intron | 25.0% |
| ! | TATGCATAAAAAGTTCCAAA+GGG | - | chr8_3:60383207-60383226 | Msa1299280:intron | 25.0% |
| ! | ATTGTTGAACTGAAAAAAAG+TGG | + | chr8_3:60383547-60383566 | None:intergenic | 25.0% |
| !!! | AACGATTTTTGTAAAGCATT+TGG | - | chr8_3:60383870-60383889 | Msa1299280:intron | 25.0% |
| !! | AAAGCATACTGATTGATTAT+TGG | + | chr8_3:60383904-60383923 | None:intergenic | 25.0% |
| ! | AATAATCAATCAGTATGCTT+TGG | - | chr8_3:60383903-60383922 | Msa1299280:intron | 25.0% |
| ! | ATAATCAATCAGTATGCTTT+GGG | - | chr8_3:60383904-60383923 | Msa1299280:intron | 25.0% |
| ! | TGTAATAAAGATAAATGGTC+TGG | - | chr8_3:60384248-60384267 | Msa1299280:intron | 25.0% |
| ! | ATAACAGTTTGATATTGACA+CGG | + | chr8_3:60384350-60384369 | None:intergenic | 25.0% |
| ! | AAGTATAAATACCCATCATT+AGG | + | chr8_3:60384609-60384628 | None:intergenic | 25.0% |
| !!! | TTGTTTTGGGAAAAATTGTA+TGG | + | chr8_3:60384663-60384682 | None:intergenic | 25.0% |
| !! | CTATTTTCTCAAACTATTAC+CGG | - | chr8_3:60384782-60384801 | Msa1299280:CDS | 25.0% |
| ! | CTAGATTCTATTCAACTATA+TGG | + | chr8_3:60384932-60384951 | None:intergenic | 25.0% |
| ! | ATATTTATCATGAACCTTTC+AGG | - | chr8_3:60385026-60385045 | Msa1299280:CDS | 25.0% |
| ! | AAATTAGGGTTAATGAAACA+TGG | - | chr8_3:60385318-60385337 | Msa1299280:CDS | 25.0% |
| ! | AAGTAATGGTTAATGAAACT+CGG | + | chr8_3:60385392-60385411 | None:intergenic | 25.0% |
| ! | GAATTGGATTTATGGATTTA+AGG | + | chr8_3:60385715-60385734 | None:intergenic | 25.0% |
| !! | TCCTTCATTCTTGTTTATTT+GGG | + | chr8_3:60385762-60385781 | None:intergenic | 25.0% |
| !! | ATCCTTCATTCTTGTTTATT+TGG | + | chr8_3:60385763-60385782 | None:intergenic | 25.0% |
| ! | TAATATGAAAAACCAGATGA+AGG | + | chr8_3:60385876-60385895 | None:intergenic | 25.0% |
| !! | TTGGATACATCTTTTCATTT+GGG | - | chr8_3:60386568-60386587 | Msa1299280:intron | 25.0% |
| ! | ATAACTAGTATATAAGTGGA+TGG | - | chr8_3:60386908-60386927 | Msa1299280:five_prime_UTR | 25.0% |
| ! | ACAAATTGGTCATATCAATT+TGG | - | chr8_3:60386946-60386965 | Msa1299280:five_prime_UTR | 25.0% |
| AAGTTGAAGAATCCAAAAGT+AGG | + | chr8_3:60382475-60382494 | None:intergenic | 30.0% | |
| AAATTTGAGTGTGGTATTCA+AGG | + | chr8_3:60382671-60382690 | None:intergenic | 30.0% | |
| TATCAGATACATTCATCTGT+TGG | + | chr8_3:60382759-60382778 | None:intergenic | 30.0% | |
| !!! | CTTTTATAGGAAAGTGTTTG+TGG | - | chr8_3:60382937-60382956 | Msa1299280:intron | 30.0% |
| TGAACACACTTATACACAAA+AGG | - | chr8_3:60383124-60383143 | Msa1299280:intron | 30.0% | |
| ! | TTCCAAAGGGTCTTATAAAT+AGG | - | chr8_3:60383220-60383239 | Msa1299280:intron | 30.0% |
| ! | TCCAAAGGGTCTTATAAATA+GGG | - | chr8_3:60383221-60383240 | Msa1299280:intron | 30.0% |
| ! | AAAACATCGGTTACTAGTAT+AGG | + | chr8_3:60383342-60383361 | None:intergenic | 30.0% |
| ! | ACAACTGCGATTTAAAACAT+CGG | + | chr8_3:60383355-60383374 | None:intergenic | 30.0% |
| CAATCTAAGTCACGATATAA+AGG | + | chr8_3:60383466-60383485 | None:intergenic | 30.0% | |
| AACTGAAAAAAAGTGGTTAC+TGG | + | chr8_3:60383540-60383559 | None:intergenic | 30.0% | |
| ! | CTAACTTTGTTTGTTTGTAG+AGG | - | chr8_3:60383592-60383611 | Msa1299280:intron | 30.0% |
| TTTGATTGAGAAGAATTTGC+CGG | + | chr8_3:60383696-60383715 | None:intergenic | 30.0% | |
| !! | GATTTTTGTAAAGCATTTGG+TGG | - | chr8_3:60383873-60383892 | Msa1299280:intron | 30.0% |
| TAATCAATCAGTATGCTTTG+GGG | - | chr8_3:60383905-60383924 | Msa1299280:intron | 30.0% | |
| GAATGGATCTTATCTCAATA+TGG | - | chr8_3:60383998-60384017 | Msa1299280:CDS | 30.0% | |
| TGATCAGTTAGATCAACAAA+GGG | + | chr8_3:60384140-60384159 | None:intergenic | 30.0% | |
| TTGATCAGTTAGATCAACAA+AGG | + | chr8_3:60384141-60384160 | None:intergenic | 30.0% | |
| ! | TGATACTCAATTTGGAATGA+TGG | - | chr8_3:60384169-60384188 | Msa1299280:intron | 30.0% |
| ! | GATACTCAATTTGGAATGAT+GGG | - | chr8_3:60384170-60384189 | Msa1299280:intron | 30.0% |
| ! | CATCCAAATTTTGCAAACAA+CGG | - | chr8_3:60384203-60384222 | Msa1299280:intron | 30.0% |
| AATTGTGATCCATCAAAGAT+AGG | - | chr8_3:60384305-60384324 | Msa1299280:intron | 30.0% | |
| TTACTAGTACCTATCTTTGA+TGG | + | chr8_3:60384317-60384336 | None:intergenic | 30.0% | |
| TCAAAGATAGGTACTAGTAA+TGG | - | chr8_3:60384317-60384336 | Msa1299280:intron | 30.0% | |
| ATTGCAGAATATACTGCTAA+TGG | - | chr8_3:60384368-60384387 | Msa1299280:intron | 30.0% | |
| ! | CTATAAGGTGTTTAATTCAG+TGG | - | chr8_3:60384451-60384470 | Msa1299280:intron | 30.0% |
| ! | CTAATCATTATCGGATTTTC+AGG | - | chr8_3:60384494-60384513 | Msa1299280:intron | 30.0% |
| GTGAGAAGAATATTTACCAT+GGG | - | chr8_3:60384540-60384559 | Msa1299280:CDS | 30.0% | |
| TGGGTATTTATACTTCATGA+TGG | - | chr8_3:60384614-60384633 | Msa1299280:CDS | 30.0% | |
| GGGTATTTATACTTCATGAT+GGG | - | chr8_3:60384615-60384634 | Msa1299280:CDS | 30.0% | |
| !!! | AAGCAGTGATTTCTTGTTTT+GGG | + | chr8_3:60384676-60384695 | None:intergenic | 30.0% |
| GCATTTGTTTGACCAATTAT+TGG | + | chr8_3:60384906-60384925 | None:intergenic | 30.0% | |
| ATAATTGGTCAAACAAATGC+TGG | - | chr8_3:60384906-60384925 | Msa1299280:CDS | 30.0% | |
| AAGTTAGTAAACTTGGACTT+TGG | - | chr8_3:60385057-60385076 | Msa1299280:CDS | 30.0% | |
| AGTTAGTAAACTTGGACTTT+GGG | - | chr8_3:60385058-60385077 | Msa1299280:CDS | 30.0% | |
| AGATCTTTATCTTCACTGAA+TGG | + | chr8_3:60385110-60385129 | None:intergenic | 30.0% | |
| ATTCAGTGAAGATAAAGATC+TGG | - | chr8_3:60385109-60385128 | Msa1299280:CDS | 30.0% | |
| !!! | AAACCTTCCTACTTTTTTTG+TGG | - | chr8_3:60385191-60385210 | Msa1299280:CDS | 30.0% |
| AACATCTCCACAAAAAAAGT+AGG | + | chr8_3:60385201-60385220 | None:intergenic | 30.0% | |
| !!! | TACTTTTTTTGTGGAGATGT+TGG | - | chr8_3:60385200-60385219 | Msa1299280:CDS | 30.0% |
| ! | AGTTAAGGACGTTTGAAATT+AGG | - | chr8_3:60385303-60385322 | Msa1299280:CDS | 30.0% |
| ! | GTTAAGGACGTTTGAAATTA+GGG | - | chr8_3:60385304-60385323 | Msa1299280:CDS | 30.0% |
| !! | GTTGATAATGAACGAAGTAA+TGG | + | chr8_3:60385406-60385425 | None:intergenic | 30.0% |
| !! | TAGTTACACAATTGATTTGC+AGG | - | chr8_3:60385580-60385599 | Msa1299280:intron | 30.0% |
| ! | CATTCTTGTTTATTTGGGAA+TGG | + | chr8_3:60385757-60385776 | None:intergenic | 30.0% |
| TCCCAAATAAACAAGAATGA+AGG | - | chr8_3:60385758-60385777 | Msa1299280:intron | 30.0% | |
| ! | AAGCCTTTTCTTTTCCTTTT+TGG | - | chr8_3:60385850-60385869 | Msa1299280:intron | 30.0% |
| TCTATCTAAATTCTGTCACT+CGG | - | chr8_3:60386034-60386053 | Msa1299280:intron | 30.0% | |
| !! | ATGAGTTGTTTCTCATTGAT+TGG | - | chr8_3:60386181-60386200 | Msa1299280:intron | 30.0% |
| !!! | GGACTTATTTTAAAACGCTT+TGG | - | chr8_3:60386380-60386399 | Msa1299280:CDS | 30.0% |
| GTGAAATTTCCACTATTTGA+AGG | + | chr8_3:60386468-60386487 | None:intergenic | 30.0% | |
| ! | CTTGGATACATCTTTTCATT+TGG | - | chr8_3:60386567-60386586 | Msa1299280:intron | 30.0% |
| GTTTATATTCTTGCAAGTTC+TGG | - | chr8_3:60386609-60386628 | Msa1299280:intron | 30.0% | |
| GCAACATAACAAAAAACCTG+TGG | + | chr8_3:60382441-60382460 | None:intergenic | 35.0% | |
| ATCCAAAAGTAGGAACAGAA+GGG | + | chr8_3:60382465-60382484 | None:intergenic | 35.0% | |
| AATCCAAAAGTAGGAACAGA+AGG | + | chr8_3:60382466-60382485 | None:intergenic | 35.0% | |
| ATACTTGAGTCAACACATAG+AGG | + | chr8_3:60382503-60382522 | None:intergenic | 35.0% | |
| AGTGTGGTATTCAAGGTAAA+GGG | + | chr8_3:60382664-60382683 | None:intergenic | 35.0% | |
| GTAAGGACAAAATTTGAGTG+TGG | + | chr8_3:60382680-60382699 | None:intergenic | 35.0% | |
| CAAGTACTTCCATTGTTGTA+AGG | + | chr8_3:60382697-60382716 | None:intergenic | 35.0% | |
| ! | CTGAATTTGTTCATCGTGTA+TGG | + | chr8_3:60382728-60382747 | None:intergenic | 35.0% |
| AAATCAATACTTTGTGCGGT+AGG | - | chr8_3:60382799-60382818 | Msa1299280:intron | 35.0% | |
| TCCCTATTTATAAGACCCTT+TGG | + | chr8_3:60383225-60383244 | None:intergenic | 35.0% | |
| TGTGATTCTTCGGAATGTTT+AGG | + | chr8_3:60383393-60383412 | None:intergenic | 35.0% | |
| AAGTTAGCTAGCTACATACA+AGG | + | chr8_3:60383579-60383598 | None:intergenic | 35.0% | |
| GGCAAATTCTTCTCAATCAA+AGG | - | chr8_3:60383695-60383714 | Msa1299280:intron | 35.0% | |
| ! | TTCTTCTCAATCAAAGGCAT+CGG | - | chr8_3:60383701-60383720 | Msa1299280:intron | 35.0% |
| TTCATTCAGTTTGGTTGCAT+TGG | + | chr8_3:60383835-60383854 | None:intergenic | 35.0% | |
| AATCAATCAGTATGCTTTGG+GGG | - | chr8_3:60383906-60383925 | Msa1299280:intron | 35.0% | |
| TCATTGTTACGTAATGCAAC+AGG | + | chr8_3:60383936-60383955 | None:intergenic | 35.0% | |
| GCTTATGCCTTGAGAAAATT+GGG | - | chr8_3:60383976-60383995 | Msa1299280:CDS | 35.0% | |
| ! | ATCCATTCCCAATTTTCTCA+AGG | + | chr8_3:60383986-60384005 | None:intergenic | 35.0% |
| AGTTAAACGAAGCGAAGAAT+CGG | + | chr8_3:60384229-60384248 | None:intergenic | 35.0% | |
| AATATTCTTCTCACCTCAGT+TGG | + | chr8_3:60384534-60384553 | None:intergenic | 35.0% | |
| GGTGAGAAGAATATTTACCA+TGG | - | chr8_3:60384539-60384558 | Msa1299280:CDS | 35.0% | |
| ATACTCTTTGGACCTAATGA+TGG | - | chr8_3:60384594-60384613 | Msa1299280:CDS | 35.0% | |
| TACTCTTTGGACCTAATGAT+GGG | - | chr8_3:60384595-60384614 | Msa1299280:CDS | 35.0% | |
| ! | TTATACTTCATGATGGGAGA+TGG | - | chr8_3:60384621-60384640 | Msa1299280:CDS | 35.0% |
| !! | CAAGCAGTGATTTCTTGTTT+TGG | + | chr8_3:60384677-60384696 | None:intergenic | 35.0% |
| CAAAACAAGAAATCACTGCT+TGG | - | chr8_3:60384675-60384694 | Msa1299280:intron | 35.0% | |
| AAGTGTTTGTACTACTCACT+TGG | + | chr8_3:60384732-60384751 | None:intergenic | 35.0% | |
| TAACACTAACATGTCAACAC+CGG | + | chr8_3:60384804-60384823 | None:intergenic | 35.0% | |
| GCATCAGAAGTTAGTAAACT+TGG | - | chr8_3:60385050-60385069 | Msa1299280:CDS | 35.0% | |
| GTTAGTAAACTTGGACTTTG+GGG | - | chr8_3:60385059-60385078 | Msa1299280:CDS | 35.0% | |
| !! | TCACTGAATGGATTATCCTT+AGG | + | chr8_3:60385098-60385117 | None:intergenic | 35.0% |
| CCAAGGATTTCTTAATCCTA+AGG | + | chr8_3:60385150-60385169 | None:intergenic | 35.0% | |
| CCTTAGGATTAAGAAATCCT+TGG | - | chr8_3:60385147-60385166 | Msa1299280:CDS | 35.0% | |
| TCTCCACAAAAAAAGTAGGA+AGG | + | chr8_3:60385197-60385216 | None:intergenic | 35.0% | |
| GGTTAATGAAACATGGAGTT+TGG | - | chr8_3:60385325-60385344 | Msa1299280:CDS | 35.0% | |
| TGGAGTTTGGTTAATGAGTA+CGG | - | chr8_3:60385338-60385357 | Msa1299280:CDS | 35.0% | |
| GTTAATGAGTACGGCAATAT+TGG | - | chr8_3:60385347-60385366 | Msa1299280:CDS | 35.0% | |
| AACTTCCTTAACAGAGAACT+CGG | + | chr8_3:60385428-60385447 | None:intergenic | 35.0% | |
| TCTCTGTTAAGGAAGTTCAA+TGG | - | chr8_3:60385431-60385450 | Msa1299280:CDS | 35.0% | |
| TTTGCAGGATCTTTATGAAG+AGG | - | chr8_3:60385595-60385614 | Msa1299280:intron | 35.0% | |
| ATCACAAAAGGTGGAAACTA+TGG | - | chr8_3:60385626-60385645 | Msa1299280:intron | 35.0% | |
| AGGCCAAAAAGGAAAAGAAA+AGG | + | chr8_3:60385856-60385875 | None:intergenic | 35.0% | |
| GTCACAGAAAGAATAAGATG+TGG | - | chr8_3:60385911-60385930 | Msa1299280:intron | 35.0% | |
| CTATCTAAATTCTGTCACTC+GGG | - | chr8_3:60386035-60386054 | Msa1299280:intron | 35.0% | |
| GTGATTCTCTACAATGTTGA+GGG | + | chr8_3:60386254-60386273 | None:intergenic | 35.0% | |
| AACACACCAACTGTAGTATT+TGG | + | chr8_3:60386279-60386298 | None:intergenic | 35.0% | |
| TTTCAGTTGTGGTCATGATT+TGG | - | chr8_3:60386298-60386317 | Msa1299280:intron | 35.0% | |
| ATGTTTGCTCATATTTGCCA+TGG | - | chr8_3:60386358-60386377 | Msa1299280:CDS | 35.0% | |
| TGTTTGCTCATATTTGCCAT+GGG | - | chr8_3:60386359-60386378 | Msa1299280:CDS | 35.0% | |
| !!! | GCGTTTTAAAATAAGTCCCA+TGG | + | chr8_3:60386378-60386397 | None:intergenic | 35.0% |
| TCCACTATTTGAAGGATCTT+CGG | + | chr8_3:60386460-60386479 | None:intergenic | 35.0% | |
| TCCATAGAAGCTACTCAAAT+GGG | + | chr8_3:60386736-60386755 | None:intergenic | 35.0% | |
| ATCCATAGAAGCTACTCAAA+TGG | + | chr8_3:60386737-60386756 | None:intergenic | 35.0% | |
| GCAGCTTTCATCTTTATTGT+TGG | - | chr8_3:60386767-60386786 | Msa1299280:five_prime_UTR | 35.0% | |
| TGTGGAAAGAACAGTCTTCA+TGG | + | chr8_3:60382423-60382442 | None:intergenic | 40.0% | |
| ATGAAGACTGTTCTTTCCAC+AGG | - | chr8_3:60382422-60382441 | Msa1299280:CDS | 40.0% | |
| GAGTGTGGTATTCAAGGTAA+AGG | + | chr8_3:60382665-60382684 | None:intergenic | 40.0% | |
| TGATTTCAAAAGTGAGGCAC+AGG | + | chr8_3:60382785-60382804 | None:intergenic | 40.0% | |
| ACGAAGTGAGTAGCAAAGAT+TGG | - | chr8_3:60383244-60383263 | Msa1299280:intron | 40.0% | |
| CGAAGTGAGTAGCAAAGATT+GGG | - | chr8_3:60383245-60383264 | Msa1299280:intron | 40.0% | |
| AGTACTACGCAAAAGGTCTA+GGG | + | chr8_3:60383271-60383290 | None:intergenic | 40.0% | |
| CGCATAAGACTGTGATTCTT+CGG | + | chr8_3:60383403-60383422 | None:intergenic | 40.0% | |
| GATTGATGCAGCCTCATTTA+CGG | - | chr8_3:60383422-60383441 | Msa1299280:CDS | 40.0% | |
| TGTCTCTGTAACCGTAAATG+AGG | + | chr8_3:60383436-60383455 | None:intergenic | 40.0% | |
| GAAAAAAAGTGGTTACTGGC+AGG | + | chr8_3:60383536-60383555 | None:intergenic | 40.0% | |
| TAAACAGCTCGCCTGAATAA+GGG | + | chr8_3:60383623-60383642 | None:intergenic | 40.0% | |
| TTATTCAGGCGAGCTGTTTA+CGG | - | chr8_3:60383623-60383642 | Msa1299280:intron | 40.0% | |
| AATGGCAGAATTGCAAAGCA+CGG | + | chr8_3:60383673-60383692 | None:intergenic | 40.0% | |
| TTGAGAAGAATTTGCCGGAA+TGG | + | chr8_3:60383691-60383710 | None:intergenic | 40.0% | |
| !! | ATGACTTCTGCTCTGAAGTA+TGG | - | chr8_3:60383727-60383746 | Msa1299280:intron | 40.0% |
| !! | TGACTTCTGCTCTGAAGTAT+GGG | - | chr8_3:60383728-60383747 | Msa1299280:intron | 40.0% |
| ! | TTGGTTGCATTGGTATTAGC+TGG | + | chr8_3:60383825-60383844 | None:intergenic | 40.0% |
| CAACCAAACTGAATGAACTG+TGG | - | chr8_3:60383838-60383857 | Msa1299280:intron | 40.0% | |
| TTGCCACAGTTCATTCAGTT+TGG | + | chr8_3:60383844-60383863 | None:intergenic | 40.0% | |
| ! | ATCAATCAGTATGCTTTGGG+GGG | - | chr8_3:60383907-60383926 | Msa1299280:intron | 40.0% |
| TTTCTCAAGGCATAAGCCAT+GGG | + | chr8_3:60383973-60383992 | None:intergenic | 40.0% | |
| ! | TTTTCTCAAGGCATAAGCCA+TGG | + | chr8_3:60383974-60383993 | None:intergenic | 40.0% |
| GGCTTATGCCTTGAGAAAAT+TGG | - | chr8_3:60383975-60383994 | Msa1299280:CDS | 40.0% | |
| TGCCTTGAGAAAATTGGGAA+TGG | - | chr8_3:60383981-60384000 | Msa1299280:CDS | 40.0% | |
| AATATGGTTGCTCATCCTGA+TGG | - | chr8_3:60384014-60384033 | Msa1299280:CDS | 40.0% | |
| TCAAATGGGGAAAGTTTGGT+TGG | - | chr8_3:60384061-60384080 | Msa1299280:CDS | 40.0% | |
| TTGGCAACTATTCCTGAAGA+AGG | - | chr8_3:60384080-60384099 | Msa1299280:CDS | 40.0% | |
| ACTATTCCTGAAGAAGGATC+AGG | - | chr8_3:60384086-60384105 | Msa1299280:CDS | 40.0% | |
| GAATATACTGCTAATGGCAC+CGG | - | chr8_3:60384374-60384393 | Msa1299280:intron | 40.0% | |
| AATATACTGCTAATGGCACC+GGG | - | chr8_3:60384375-60384394 | Msa1299280:intron | 40.0% | |
| TACAAGTGCTAAACCAACTG+AGG | - | chr8_3:60384518-60384537 | Msa1299280:intron | 40.0% | |
| CTCCCATTTACATCTCAACA+CGG | - | chr8_3:60384564-60384583 | Msa1299280:CDS | 40.0% | |
| CACCGTGTTGAGATGTAAAT+GGG | + | chr8_3:60384569-60384588 | None:intergenic | 40.0% | |
| CAAGAAATCACTGCTTGGAA+AGG | - | chr8_3:60384680-60384699 | Msa1299280:intron | 40.0% | |
| !! | GTTAGTGTTAGCTTTGTGCT+TGG | - | chr8_3:60384814-60384833 | Msa1299280:CDS | 40.0% |
| !! | ATGAAGCATCGACAAAGACA+GGG | + | chr8_3:60384843-60384862 | None:intergenic | 40.0% |
| !! | TATGAAGCATCGACAAAGAC+AGG | + | chr8_3:60384844-60384863 | None:intergenic | 40.0% |
| TAACTTCTGATGCACCTGAA+AGG | + | chr8_3:60385043-60385062 | None:intergenic | 40.0% | |
| ! | AAGATCTGGAGCCTGAAATA+TGG | - | chr8_3:60385123-60385142 | Msa1299280:CDS | 40.0% |
| ! | AGATCTGGAGCCTGAAATAT+GGG | - | chr8_3:60385124-60385143 | Msa1299280:CDS | 40.0% |
| AATCCTAAGGCCCATATTTC+AGG | + | chr8_3:60385137-60385156 | None:intergenic | 40.0% | |
| ! | TTTTTGTGGAGATGTTGGAC+AGG | - | chr8_3:60385205-60385224 | Msa1299280:CDS | 40.0% |
| TAAACCTGCAACGCTAGTTA+AGG | - | chr8_3:60385288-60385307 | Msa1299280:CDS | 40.0% | |
| GGTTAATGAAACTCGGTAAG+TGG | + | chr8_3:60385385-60385404 | None:intergenic | 40.0% | |
| ATCAACCGAGTTCTCTGTTA+AGG | - | chr8_3:60385420-60385439 | Msa1299280:CDS | 40.0% | |
| TTAAGGGATGTATTTCCTCC+AGG | + | chr8_3:60385698-60385717 | None:intergenic | 40.0% | |
| TATGGGGGGAATTGGATTTA+TGG | + | chr8_3:60385723-60385742 | None:intergenic | 40.0% | |
| AATGGTTGTATCCTGCTATG+GGG | + | chr8_3:60385739-60385758 | None:intergenic | 40.0% | |
| GAATGGTTGTATCCTGCTAT+GGG | + | chr8_3:60385740-60385759 | None:intergenic | 40.0% | |
| GAAGGATCAGCATCAATTAC+CGG | - | chr8_3:60385776-60385795 | Msa1299280:intron | 40.0% | |
| AAGGATCAGCATCAATTACC+GGG | - | chr8_3:60385777-60385796 | Msa1299280:intron | 40.0% | |
| AAACATGCAAGGATCAGTCA+TGG | + | chr8_3:60385819-60385838 | None:intergenic | 40.0% | |
| ATGACTGATCCTTGCATGTT+TGG | - | chr8_3:60385818-60385837 | Msa1299280:intron | 40.0% | |
| !! | TTTCCTTTTTGGCCTTCATC+TGG | - | chr8_3:60385861-60385880 | Msa1299280:intron | 40.0% |
| AAACCAGATGAAGGCCAAAA+AGG | + | chr8_3:60385867-60385886 | None:intergenic | 40.0% | |
| AATGCAGCTTGTAAGGTGAA+GGG | + | chr8_3:60385966-60385985 | None:intergenic | 40.0% | |
| AAATGCAGCTTGTAAGGTGA+AGG | + | chr8_3:60385967-60385986 | None:intergenic | 40.0% | |
| CCATACAAATGCAGCTTGTA+AGG | + | chr8_3:60385973-60385992 | None:intergenic | 40.0% | |
| CCTTACAAGCTGCATTTGTA+TGG | - | chr8_3:60385970-60385989 | Msa1299280:intron | 40.0% | |
| ATGCTTTACATGTCCACTAC+AGG | - | chr8_3:60386060-60386079 | Msa1299280:intron | 40.0% | |
| TGCTTTACATGTCCACTACA+GGG | - | chr8_3:60386061-60386080 | Msa1299280:intron | 40.0% | |
| ! | GCAAGAGTTAAGTATTGTGC+TGG | + | chr8_3:60386128-60386147 | None:intergenic | 40.0% |
| CGTGATTCTCTACAATGTTG+AGG | + | chr8_3:60386255-60386274 | None:intergenic | 40.0% | |
| TCACGACCAAATACTACAGT+TGG | - | chr8_3:60386270-60386289 | Msa1299280:intron | 40.0% | |
| !! | AGTTGGTGTGTTTTCAGTTG+TGG | - | chr8_3:60386287-60386306 | Msa1299280:intron | 40.0% |
| !!! | AAAACGCTTTGGTGCTTTTC+AGG | - | chr8_3:60386391-60386410 | Msa1299280:CDS | 40.0% |
| ACTATTTGAAGGATCTTCGG+TGG | + | chr8_3:60386457-60386476 | None:intergenic | 40.0% | |
| ACCGAAGATCCTTCAAATAG+TGG | - | chr8_3:60386456-60386475 | Msa1299280:CDS | 40.0% | |
| GAAAAGATGTATCCAAGAGC+TGG | + | chr8_3:60386564-60386583 | None:intergenic | 40.0% | |
| TTACACTTGCTCACAGGAAA+AGG | - | chr8_3:60386665-60386684 | Msa1299280:CDS | 40.0% | |
| ACCCATTTGAGTAGCTTCTA+TGG | - | chr8_3:60386732-60386751 | Msa1299280:CDS | 40.0% | |
| GCACAGCACTTACATCAAGA+GGG | - | chr8_3:60382186-60382205 | Msa1299280:three_prime_UTR | 45.0% | |
| AGCACTTACATCAAGAGGGT+TGG | - | chr8_3:60382190-60382209 | Msa1299280:three_prime_UTR | 45.0% | |
| GAAAGAACAGTCTTCATGGC+AGG | + | chr8_3:60382419-60382438 | None:intergenic | 45.0% | |
| ! | CTCCCTTCTGTTCCTACTTT+TGG | - | chr8_3:60382460-60382479 | Msa1299280:CDS | 45.0% |
| GAGTACTACGCAAAAGGTCT+AGG | + | chr8_3:60383272-60383291 | None:intergenic | 45.0% | |
| !! | CTGAAGGAGTACTACGCAAA+AGG | + | chr8_3:60383278-60383297 | None:intergenic | 45.0% |
| GCTAGCTACATACAAGGCAT+AGG | + | chr8_3:60383573-60383592 | None:intergenic | 45.0% | |
| ! | TAGAGGTGTGACCCTTATTC+AGG | - | chr8_3:60383609-60383628 | Msa1299280:intron | 45.0% |
| GTAAACAGCTCGCCTGAATA+AGG | + | chr8_3:60383624-60383643 | None:intergenic | 45.0% | |
| ATGGCAGAATTGCAAAGCAC+GGG | + | chr8_3:60383672-60383691 | None:intergenic | 45.0% | |
| GCTTTGCAATTCTGCCATTC+CGG | - | chr8_3:60383674-60383693 | Msa1299280:intron | 45.0% | |
| CCTTGTAAGGAAGGGGAAAA+TGG | + | chr8_3:60383786-60383805 | None:intergenic | 45.0% | |
| ! | CCATTTTCCCCTTCCTTACA+AGG | - | chr8_3:60383783-60383802 | Msa1299280:intron | 45.0% |
| TCCTTGACCTTGTAAGGAAG+GGG | + | chr8_3:60383793-60383812 | None:intergenic | 45.0% | |
| CTCCTTGACCTTGTAAGGAA+GGG | + | chr8_3:60383794-60383813 | None:intergenic | 45.0% | |
| !! | TCAATCAGTATGCTTTGGGG+GGG | - | chr8_3:60383908-60383927 | Msa1299280:intron | 45.0% |
| TTCTCAAGGCATAAGCCATG+GGG | + | chr8_3:60383972-60383991 | None:intergenic | 45.0% | |
| GCGTTCTTCTCGAGTCAAAT+GGG | - | chr8_3:60384047-60384066 | Msa1299280:CDS | 45.0% | |
| CGTTCTTCTCGAGTCAAATG+GGG | - | chr8_3:60384048-60384067 | Msa1299280:CDS | 45.0% | |
| CGAGTCAAATGGGGAAAGTT+TGG | - | chr8_3:60384057-60384076 | Msa1299280:CDS | 45.0% | |
| ATTCCTGAAGAAGGATCAGG+AGG | - | chr8_3:60384089-60384108 | Msa1299280:CDS | 45.0% | |
| AGAAGGATCAGGAGGACAAT+TGG | - | chr8_3:60384097-60384116 | Msa1299280:CDS | 45.0% | |
| CGGCCGTTGTTTGCAAAATT+TGG | + | chr8_3:60384209-60384228 | None:intergenic | 45.0% | |
| GATAAATGGTCTGGCTGCAA+TGG | - | chr8_3:60384257-60384276 | Msa1299280:intron | 45.0% | |
| AGATGTAAATGGGAGTCCCA+TGG | + | chr8_3:60384559-60384578 | None:intergenic | 45.0% | |
| CCACCGTGTTGAGATGTAAA+TGG | + | chr8_3:60384570-60384589 | None:intergenic | 45.0% | |
| CCATTTACATCTCAACACGG+TGG | - | chr8_3:60384567-60384586 | Msa1299280:CDS | 45.0% | |
| ! | TACTTCATGATGGGAGATGG+AGG | - | chr8_3:60384624-60384643 | Msa1299280:CDS | 45.0% |
| CACTGCTTGGAAAGGTTATG+AGG | - | chr8_3:60384688-60384707 | Msa1299280:intron | 45.0% | |
| GGGTAGCTACTCAATTCCTA+AGG | - | chr8_3:60385079-60385098 | Msa1299280:CDS | 45.0% | |
| GAATCAAAACTGCATCGCCA+AGG | + | chr8_3:60385167-60385186 | None:intergenic | 45.0% | |
| GAATGCATGCGTCTTTCTTG+AGG | - | chr8_3:60385481-60385500 | Msa1299280:CDS | 45.0% | |
| GCAGGATCTTTATGAAGAGG+TGG | - | chr8_3:60385598-60385617 | Msa1299280:intron | 45.0% | |
| GAGGTGGATCTCATCACAAA+AGG | - | chr8_3:60385614-60385633 | Msa1299280:intron | 45.0% | |
| GTGGATCTCATCACAAAAGG+TGG | - | chr8_3:60385617-60385636 | Msa1299280:intron | 45.0% | |
| CAAAAGGTGGAAACTATGGC+TGG | - | chr8_3:60385630-60385649 | Msa1299280:intron | 45.0% | |
| TATGGCTGGCGTGTATATGA+GGG | - | chr8_3:60385644-60385663 | Msa1299280:intron | 45.0% | |
| GGTGACTCTGTAGTAGTGAA+TGG | + | chr8_3:60385677-60385696 | None:intergenic | 45.0% | |
| TTCACTACTACAGAGTCACC+TGG | - | chr8_3:60385677-60385696 | Msa1299280:intron | 45.0% | |
| ATGGTTGTATCCTGCTATGG+GGG | + | chr8_3:60385738-60385757 | None:intergenic | 45.0% | |
| GGAATGGTTGTATCCTGCTA+TGG | + | chr8_3:60385741-60385760 | None:intergenic | 45.0% | |
| AGGATCAGCATCAATTACCG+GGG | - | chr8_3:60385778-60385797 | Msa1299280:intron | 45.0% | |
| GGATCGATAAACATATCCCC+CGG | + | chr8_3:60385798-60385817 | None:intergenic | 45.0% | |
| CTGATCCTTGCATGTTTGGA+AGG | - | chr8_3:60385822-60385841 | Msa1299280:intron | 45.0% | |
| CAGTACCTTCCAAACATGCA+AGG | + | chr8_3:60385830-60385849 | None:intergenic | 45.0% | |
| TTACATGTCCACTACAGGGA+CGG | - | chr8_3:60386065-60386084 | Msa1299280:intron | 45.0% | |
| CATCAAATCGCTTGATGCTG+TGG | - | chr8_3:60386335-60386354 | Msa1299280:intron | 45.0% | |
| CCTGTATGCTGATCTTTACG+CGG | - | chr8_3:60386416-60386435 | Msa1299280:CDS | 45.0% | |
| CTGTATGCTGATCTTTACGC+GGG | - | chr8_3:60386417-60386436 | Msa1299280:CDS | 45.0% | |
| AATCGTGTGCACAGCTGAAA+GGG | + | chr8_3:60386503-60386522 | None:intergenic | 45.0% | |
| GATGTATCCAAGAGCTGGAA+GGG | + | chr8_3:60386559-60386578 | None:intergenic | 45.0% | |
| AGATGTATCCAAGAGCTGGA+AGG | + | chr8_3:60386560-60386579 | None:intergenic | 45.0% | |
| !! | CTCAAATGGGTTGCATGAGA+AGG | + | chr8_3:60386723-60386742 | None:intergenic | 45.0% |
| !! | TTCAAAAATATATATTATAT+GGG | + | chr8_3:60382241-60382260 | None:intergenic | 5.0% |
| !! | ATTCAAAAATATATATTATA+TGG | + | chr8_3:60382242-60382261 | None:intergenic | 5.0% |
| !!! | TAAAATAAATATATGTTTTA+GGG | + | chr8_3:60382835-60382854 | None:intergenic | 5.0% |
| !!! | TTAAAATAAATATATGTTTT+AGG | + | chr8_3:60382836-60382855 | None:intergenic | 5.0% |
| GGCACAGCACTTACATCAAG+AGG | - | chr8_3:60382185-60382204 | Msa1299280:three_prime_UTR | 50.0% | |
| GCAGGCGCCAAAGAATGAAA+AGG | + | chr8_3:60382401-60382420 | None:intergenic | 50.0% | |
| GTGTGTGTGTGTGTGTGTAG+AGG | - | chr8_3:60382636-60382655 | Msa1299280:CDS | 50.0% | |
| ACTCCTTCAGTGTCTCAACG+TGG | - | chr8_3:60383288-60383307 | Msa1299280:intron | 50.0% | |
| CTCCTTCAGTGTCTCAACGT+GGG | - | chr8_3:60383289-60383308 | Msa1299280:intron | 50.0% | |
| AACCCACGTTGAGACACTGA+AGG | + | chr8_3:60383294-60383313 | None:intergenic | 50.0% | |
| TTCAGTGTCTCAACGTGGGT+TGG | - | chr8_3:60383293-60383312 | Msa1299280:intron | 50.0% | |
| TCAGTGTCTCAACGTGGGTT+GGG | - | chr8_3:60383294-60383313 | Msa1299280:intron | 50.0% | |
| CAAAGCACGGGAACTGATCT+CGG | + | chr8_3:60383660-60383679 | None:intergenic | 50.0% | |
| TCCCCTTCCTTACAAGGTCA+AGG | - | chr8_3:60383789-60383808 | Msa1299280:intron | 50.0% | |
| CCTCCTTGACCTTGTAAGGA+AGG | + | chr8_3:60383795-60383814 | None:intergenic | 50.0% | |
| CCTTCCTTACAAGGTCAAGG+AGG | - | chr8_3:60383792-60383811 | Msa1299280:intron | 50.0% | |
| TCCTTACAAGGTCAAGGAGG+TGG | - | chr8_3:60383795-60383814 | Msa1299280:intron | 50.0% | |
| TCCACCTCCTTGACCTTGTA+AGG | + | chr8_3:60383799-60383818 | None:intergenic | 50.0% | |
| GAGACTATTATCCCTCCCCA+TGG | - | chr8_3:60383954-60383973 | Msa1299280:CDS | 50.0% | |
| ! | TTTGACTCGAGAAGAACGCG+CGG | + | chr8_3:60384046-60384065 | None:intergenic | 50.0% |
| CGCGTTCTTCTCGAGTCAAA+TGG | - | chr8_3:60384046-60384065 | Msa1299280:CDS | 50.0% | |
| TGTCCTCCTGATCCTTCTTC+AGG | + | chr8_3:60384095-60384114 | None:intergenic | 50.0% | |
| GTAGAAATGCGTACCGAGGA+TGG | + | chr8_3:60384407-60384426 | None:intergenic | 50.0% | |
| TGGTGTAGAAATGCGTACCG+AGG | + | chr8_3:60384411-60384430 | None:intergenic | 50.0% | |
| CACGGTGGTCAGATACTCTT+TGG | - | chr8_3:60384582-60384601 | Msa1299280:CDS | 50.0% | |
| ! | TTCATGATGGGAGATGGAGG+AGG | - | chr8_3:60384627-60384646 | Msa1299280:CDS | 50.0% |
| GAGCCTGAAATATGGGCCTT+AGG | - | chr8_3:60385131-60385150 | Msa1299280:CDS | 50.0% | |
| ACGTCCTTAACTAGCGTTGC+AGG | + | chr8_3:60385295-60385314 | None:intergenic | 50.0% | |
| CTATGGCTGGCGTGTATATG+AGG | - | chr8_3:60385643-60385662 | Msa1299280:intron | 50.0% | |
| ACTACTACAGAGTCACCTGG+AGG | - | chr8_3:60385680-60385699 | Msa1299280:intron | 50.0% | |
| AATCCAATTCCCCCCATAGC+AGG | - | chr8_3:60385725-60385744 | Msa1299280:intron | 50.0% | |
| TATCCTGCTATGGGGGGAAT+TGG | + | chr8_3:60385731-60385750 | None:intergenic | 50.0% | |
| TGGTTGTATCCTGCTATGGG+GGG | + | chr8_3:60385737-60385756 | None:intergenic | 50.0% | |
| GGATCAGCATCAATTACCGG+GGG | - | chr8_3:60385779-60385798 | Msa1299280:intron | 50.0% | |
| CCGCGTAAAGATCAGCATAC+AGG | + | chr8_3:60386419-60386438 | None:intergenic | 50.0% | |
| GAATCGTGTGCACAGCTGAA+AGG | + | chr8_3:60386504-60386523 | None:intergenic | 50.0% | |
| ! | GGTGCTGAATCACACGGTAT+AGG | + | chr8_3:60386528-60386547 | None:intergenic | 50.0% |
| !! | CTACTGGGTGCTGAATCACA+CGG | + | chr8_3:60386534-60386553 | None:intergenic | 50.0% |
| ! | AGCGACTTGGACGAACAACT+CGG | + | chr8_3:60386641-60386660 | None:intergenic | 50.0% |
| CAAGTGTAACTGCAGCGACT+TGG | + | chr8_3:60386654-60386673 | None:intergenic | 50.0% | |
| CTGCAGTTACACTTGCTCAC+AGG | - | chr8_3:60386659-60386678 | Msa1299280:CDS | 50.0% | |
| TGAGAAGGAGAAGGAGAAGG+AGG | + | chr8_3:60386708-60386727 | None:intergenic | 50.0% | |
| GCATGAGAAGGAGAAGGAGA+AGG | + | chr8_3:60386711-60386730 | None:intergenic | 50.0% | |
| TGGGTTGCATGAGAAGGAGA+AGG | + | chr8_3:60386717-60386736 | None:intergenic | 50.0% | |
| ! | GATGTAAGTGCTGTGCCCCA+CGG | + | chr8_3:60382182-60382201 | None:intergenic | 55.0% |
| CAAGGCATAAGCCATGGGGA+GGG | + | chr8_3:60383968-60383987 | None:intergenic | 55.0% | |
| TCAAGGCATAAGCCATGGGG+AGG | + | chr8_3:60383969-60383988 | None:intergenic | 55.0% | |
| AATGCGTACCGAGGATGGCT+GGG | + | chr8_3:60384402-60384421 | None:intergenic | 55.0% | |
| AAATGCGTACCGAGGATGGC+TGG | + | chr8_3:60384403-60384422 | None:intergenic | 55.0% | |
| ! | ATGGGAGATGGAGGAGGTAC+AGG | - | chr8_3:60384633-60384652 | Msa1299280:CDS | 55.0% |
| TCTTCACACCGTCCCTGTAG+TGG | + | chr8_3:60386076-60386095 | None:intergenic | 55.0% | |
| ATCTTTACGCGGGTGCGCTT+TGG | - | chr8_3:60386427-60386446 | Msa1299280:CDS | 55.0% | |
| TCTTTACGCGGGTGCGCTTT+GGG | - | chr8_3:60386428-60386447 | Msa1299280:CDS | 55.0% | |
| AGAGCTGGAAGGGAGCTACT+GGG | + | chr8_3:60386549-60386568 | None:intergenic | 55.0% | |
| AAGAGCTGGAAGGGAGCTAC+TGG | + | chr8_3:60386550-60386569 | None:intergenic | 55.0% | |
| AGTAGCTCCCTTCCAGCTCT+TGG | - | chr8_3:60386549-60386568 | Msa1299280:intron | 55.0% | |
| CACGGGAACTGATCTCGGTG+TGG | + | chr8_3:60383655-60383674 | None:intergenic | 60.0% | |
| AACGCGCGGTTTGAGCCATC+AGG | + | chr8_3:60384032-60384051 | None:intergenic | 60.0% | |
| TACCGAGGATGGCTGGGACC+CGG | + | chr8_3:60384396-60384415 | None:intergenic | 65.0% | |
| CACCGGGTCCCAGCCATCCT+CGG | - | chr8_3:60384391-60384410 | Msa1299280:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 60382175 | 60386999 | 60382175 | ID=Msa1299280;Name=Msa1299280 |
| chr8_3 | mRNA | 60382175 | 60386999 | 60382175 | ID=Msa1299280-mRNA-1;Parent=Msa1299280;Name=Msa1299280-mRNA-1;_AED=0.04;_eAED=0.04;_QI=247|0.83|0.85|1|1|1|7|190|669 |
| chr8_3 | exon | 60382175 | 60382761 | 60382175 | ID=Msa1299280-mRNA-1:exon:17635;Parent=Msa1299280-mRNA-1 |
| chr8_3 | exon | 60383331 | 60383572 | 60383331 | ID=Msa1299280-mRNA-1:exon:17634;Parent=Msa1299280-mRNA-1 |
| chr8_3 | exon | 60383948 | 60384126 | 60383948 | ID=Msa1299280-mRNA-1:exon:17633;Parent=Msa1299280-mRNA-1 |
| chr8_3 | exon | 60384526 | 60384658 | 60384526 | ID=Msa1299280-mRNA-1:exon:17632;Parent=Msa1299280-mRNA-1 |
| chr8_3 | exon | 60384762 | 60385562 | 60384762 | ID=Msa1299280-mRNA-1:exon:17631;Parent=Msa1299280-mRNA-1 |
| chr8_3 | exon | 60386358 | 60386518 | 60386358 | ID=Msa1299280-mRNA-1:exon:17630;Parent=Msa1299280-mRNA-1 |
| chr8_3 | exon | 60386656 | 60386999 | 60386656 | ID=Msa1299280-mRNA-1:exon:17629;Parent=Msa1299280-mRNA-1 |
| chr8_3 | five_prime_UTR | 60386753 | 60386999 | 60386753 | ID=Msa1299280-mRNA-1:five_prime_utr;Parent=Msa1299280-mRNA-1 |
| chr8_3 | CDS | 60386656 | 60386752 | 60386656 | ID=Msa1299280-mRNA-1:cds;Parent=Msa1299280-mRNA-1 |
| chr8_3 | CDS | 60386358 | 60386518 | 60386358 | ID=Msa1299280-mRNA-1:cds;Parent=Msa1299280-mRNA-1 |
| chr8_3 | CDS | 60384762 | 60385562 | 60384762 | ID=Msa1299280-mRNA-1:cds;Parent=Msa1299280-mRNA-1 |
| chr8_3 | CDS | 60384526 | 60384658 | 60384526 | ID=Msa1299280-mRNA-1:cds;Parent=Msa1299280-mRNA-1 |
| chr8_3 | CDS | 60383948 | 60384126 | 60383948 | ID=Msa1299280-mRNA-1:cds;Parent=Msa1299280-mRNA-1 |
| chr8_3 | CDS | 60383331 | 60383572 | 60383331 | ID=Msa1299280-mRNA-1:cds;Parent=Msa1299280-mRNA-1 |
| chr8_3 | CDS | 60382365 | 60382761 | 60382365 | ID=Msa1299280-mRNA-1:cds;Parent=Msa1299280-mRNA-1 |
| chr8_3 | three_prime_UTR | 60382175 | 60382364 | 60382175 | ID=Msa1299280-mRNA-1:three_prime_utr;Parent=Msa1299280-mRNA-1 |
| Gene Sequence |
| Protein sequence |
