Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1311170 | sp|Q7XA39|RGA4_SOLBU | 25.258 | 582 | 316 | 21 | 1 | 502 | 443 | 985 | 1.87e-20 | 99.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1311170 | G7LED2 | 66.206 | 506 | 133 | 7 | 1 | 504 | 461 | 930 | 0.0 | 622 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004180 | Msa1311170 | -0.814598 | 1.419855e-51 | -8.615850e-47 |
| Msa0004940 | Msa1311170 | 0.804360 | 2.242562e-49 | -8.615850e-47 |
| Msa0004990 | Msa1311170 | 0.806601 | 7.598387e-50 | -8.615850e-47 |
| Msa0011010 | Msa1311170 | 0.810304 | 1.232173e-50 | -8.615850e-47 |
| Msa0011040 | Msa1311170 | 0.807618 | 4.628036e-50 | -8.615850e-47 |
| Msa0024650 | Msa1311170 | 0.812321 | 4.496784e-51 | -8.615850e-47 |
| Msa0025570 | Msa1311170 | 0.831331 | 1.773554e-55 | -8.615850e-47 |
| Msa0027020 | Msa1311170 | -0.800071 | 1.711356e-48 | -8.615850e-47 |
| Msa0048380 | Msa1311170 | 0.810312 | 1.227235e-50 | -8.615850e-47 |
| Msa0053040 | Msa1311170 | 0.810639 | 1.043226e-50 | -8.615850e-47 |
| Msa0070120 | Msa1311170 | 0.801097 | 1.057520e-48 | -8.615850e-47 |
| Msa0073110 | Msa1311170 | 0.830191 | 3.373642e-55 | -8.615850e-47 |
| Msa0075080 | Msa1311170 | -0.801623 | 8.252779e-49 | -8.615850e-47 |
| Msa0093360 | Msa1311170 | -0.805780 | 1.131478e-49 | -8.615850e-47 |
| Msa0098380 | Msa1311170 | 0.821801 | 3.328231e-53 | -8.615850e-47 |
| Msa0107830 | Msa1311170 | 0.805758 | 1.143662e-49 | -8.615850e-47 |
| Msa0111780 | Msa1311170 | 0.801804 | 7.573196e-49 | -8.615850e-47 |
| Msa0117650 | Msa1311170 | 0.858694 | 6.907486e-63 | -8.615850e-47 |
| Msa0603310 | Msa1311170 | 0.805427 | 1.341856e-49 | -8.615850e-47 |
| Msa0619450 | Msa1311170 | -0.800405 | 1.463433e-48 | -8.615850e-47 |
| Msa0637590 | Msa1311170 | 0.808274 | 3.356978e-50 | -8.615850e-47 |
| Msa0637700 | Msa1311170 | 0.824254 | 8.918768e-54 | -8.615850e-47 |
| Msa0644340 | Msa1311170 | 0.802351 | 5.845280e-49 | -8.615850e-47 |
| Msa0647300 | Msa1311170 | 0.800559 | 1.361422e-48 | -8.615850e-47 |
| Msa0659580 | Msa1311170 | -0.801607 | 8.314451e-49 | -8.615850e-47 |
| Msa0680460 | Msa1311170 | 0.815051 | 1.126658e-51 | -8.615850e-47 |
| Msa0695250 | Msa1311170 | -0.800557 | 1.362812e-48 | -8.615850e-47 |
| Msa0729740 | Msa1311170 | -0.807127 | 5.883587e-50 | -8.615850e-47 |
| Msa0743370 | Msa1311170 | 0.803578 | 3.261303e-49 | -8.615850e-47 |
| Msa0747710 | Msa1311170 | 0.809328 | 1.998249e-50 | -8.615850e-47 |
| Msa0750790 | Msa1311170 | 0.811120 | 8.206270e-51 | -8.615850e-47 |
| Msa0750830 | Msa1311170 | 0.814642 | 1.388278e-51 | -8.615850e-47 |
| Msa0777600 | Msa1311170 | 0.800568 | 1.356232e-48 | -8.615850e-47 |
| Msa0792410 | Msa1311170 | 0.807653 | 4.550689e-50 | -8.615850e-47 |
| Msa0812220 | Msa1311170 | 0.801858 | 7.384126e-49 | -8.615850e-47 |
| Msa0814160 | Msa1311170 | 0.805955 | 1.039670e-49 | -8.615850e-47 |
| Msa0829250 | Msa1311170 | -0.807205 | 5.664297e-50 | -8.615850e-47 |
| Msa0829990 | Msa1311170 | 0.814098 | 1.831770e-51 | -8.615850e-47 |
| Msa0121320 | Msa1311170 | 0.808387 | 3.175431e-50 | -8.615850e-47 |
| Msa0122930 | Msa1311170 | -0.805675 | 1.190446e-49 | -8.615850e-47 |
| Msa0166180 | Msa1311170 | 0.802055 | 6.726145e-49 | -8.615850e-47 |
| Msa0185040 | Msa1311170 | 0.834014 | 3.829219e-56 | -8.615850e-47 |
| Msa1239050 | Msa1311170 | 0.800040 | 1.736649e-48 | -8.615850e-47 |
| Msa1239190 | Msa1311170 | 0.812020 | 5.231338e-51 | -8.615850e-47 |
| Msa1239210 | Msa1311170 | 0.814355 | 1.606775e-51 | -8.615850e-47 |
| Msa1256490 | Msa1311170 | -0.802907 | 4.489007e-49 | -8.615850e-47 |
| Msa1263110 | Msa1311170 | 0.801957 | 7.046256e-49 | -8.615850e-47 |
| Msa1263370 | Msa1311170 | 0.807602 | 4.664455e-50 | -8.615850e-47 |
| Msa1269200 | Msa1311170 | 0.807643 | 4.572245e-50 | -8.615850e-47 |
| Msa1273320 | Msa1311170 | 0.801556 | 8.516479e-49 | -8.615850e-47 |
| Msa1296490 | Msa1311170 | 0.805806 | 1.117597e-49 | -8.615850e-47 |
| Msa1311170 | Msa1316960 | 0.804496 | 2.101289e-49 | -8.615850e-47 |
| Msa1311170 | Msa1319760 | 0.815891 | 7.327459e-52 | -8.615850e-47 |
| Msa1311170 | Msa1320160 | 0.832426 | 9.519632e-56 | -8.615850e-47 |
| Msa1311170 | Msa1341710 | -0.807754 | 4.331528e-50 | -8.615850e-47 |
| Msa1311170 | Msa1349420 | 0.802614 | 5.159657e-49 | -8.615850e-47 |
| Msa1311170 | Msa1350590 | -0.803517 | 3.356659e-49 | -8.615850e-47 |
| Msa1311170 | Msa1357840 | 0.820652 | 6.125161e-53 | -8.615850e-47 |
| Msa1311170 | Msa1364690 | 0.836847 | 7.362508e-57 | -8.615850e-47 |
| Msa1311170 | Msa1395380 | -0.800557 | 1.362812e-48 | -8.615850e-47 |
| Msa1311170 | Msa1399030 | 0.807490 | 4.928880e-50 | -8.615850e-47 |
| Msa1311170 | Msa1405040 | -0.800319 | 1.523818e-48 | -8.615850e-47 |
| Msa1311170 | Msa1407040 | 0.825879 | 3.684073e-54 | -8.615850e-47 |
| Msa1311170 | Msa1408230 | -0.806455 | 8.156930e-50 | -8.615850e-47 |
| Msa1311170 | Msa1417220 | 0.810457 | 1.141866e-50 | -8.615850e-47 |
| Msa1311170 | Msa1437590 | 0.845916 | 3.013712e-59 | -8.615850e-47 |
| Msa1311170 | Msa1446090 | 0.801660 | 8.106434e-49 | -8.615850e-47 |
| Msa1311170 | Msa1462610 | 0.806693 | 7.267408e-50 | -8.615850e-47 |
| Msa0366510 | Msa1311170 | 0.831041 | 2.090214e-55 | -8.615850e-47 |
| Msa0390200 | Msa1311170 | 0.805721 | 1.164086e-49 | -8.615850e-47 |
| Msa0414480 | Msa1311170 | 0.809201 | 2.127260e-50 | -8.615850e-47 |
| Msa0415010 | Msa1311170 | 0.800074 | 1.709122e-48 | -8.615850e-47 |
| Msa0418160 | Msa1311170 | 0.813182 | 2.913510e-51 | -8.615850e-47 |
| Msa0428720 | Msa1311170 | -0.803610 | 3.211322e-49 | -8.615850e-47 |
| Msa0433090 | Msa1311170 | 0.834794 | 2.439500e-56 | -8.615850e-47 |
| Msa0436810 | Msa1311170 | 0.803811 | 2.916338e-49 | -8.615850e-47 |
| Msa0454160 | Msa1311170 | 0.813786 | 2.146142e-51 | -8.615850e-47 |
| Msa0454770 | Msa1311170 | 0.806445 | 8.196583e-50 | -8.615850e-47 |
| Msa0459930 | Msa1311170 | 0.800280 | 1.551902e-48 | -8.615850e-47 |
| Msa0464310 | Msa1311170 | 0.800395 | 1.470589e-48 | -8.615850e-47 |
| Msa1001120 | Msa1311170 | 0.824786 | 6.682951e-54 | -8.615850e-47 |
| Msa1002550 | Msa1311170 | -0.809005 | 2.342436e-50 | -8.615850e-47 |
| Msa1005370 | Msa1311170 | 0.803082 | 4.131694e-49 | -8.615850e-47 |
| Msa1024420 | Msa1311170 | 0.806128 | 9.561478e-50 | -8.615850e-47 |
| Msa1029860 | Msa1311170 | 0.815612 | 8.455047e-52 | -8.615850e-47 |
| Msa1031060 | Msa1311170 | 0.807220 | 5.622945e-50 | -8.615850e-47 |
| Msa1035050 | Msa1311170 | 0.819366 | 1.206379e-52 | -8.615850e-47 |
| Msa1048390 | Msa1311170 | 0.800144 | 1.654467e-48 | -8.615850e-47 |
| Msa1062070 | Msa1311170 | 0.804267 | 2.344549e-49 | -8.615850e-47 |
| Msa1062290 | Msa1311170 | 0.801465 | 8.889926e-49 | -8.615850e-47 |
| Msa1075090 | Msa1311170 | 0.815588 | 8.561811e-52 | -8.615850e-47 |
| Msa1085820 | Msa1311170 | 0.830689 | 2.549322e-55 | -8.615850e-47 |
| Msa1088970 | Msa1311170 | 0.818678 | 1.729542e-52 | -8.615850e-47 |
| Msa1094780 | Msa1311170 | 0.805891 | 1.072440e-49 | -8.615850e-47 |
| Msa1100330 | Msa1311170 | 0.819974 | 8.759396e-53 | -8.615850e-47 |
| Msa0245660 | Msa1311170 | 0.800726 | 1.259114e-48 | -8.615850e-47 |
| Msa0253230 | Msa1311170 | -0.800965 | 1.125063e-48 | -8.615850e-47 |
| Msa0266330 | Msa1311170 | -0.807730 | 4.381978e-50 | -8.615850e-47 |
| Msa0267700 | Msa1311170 | 0.801301 | 9.606910e-49 | -8.615850e-47 |
| Msa0275730 | Msa1311170 | 0.817450 | 3.277405e-52 | -8.615850e-47 |
| Msa0307630 | Msa1311170 | 0.804953 | 1.686082e-49 | -8.615850e-47 |
| Msa0341950 | Msa1311170 | -0.807916 | 4.000323e-50 | -8.615850e-47 |
| Msa0346170 | Msa1311170 | 0.820377 | 7.082012e-53 | -8.615850e-47 |
| Msa0354600 | Msa1311170 | 0.814471 | 1.514654e-51 | -8.615850e-47 |
| Msa1107220 | Msa1311170 | 0.803832 | 2.887816e-49 | -8.615850e-47 |
| Msa1107250 | Msa1311170 | 0.815530 | 8.818989e-52 | -8.615850e-47 |
| Msa1108560 | Msa1311170 | 0.802001 | 6.899263e-49 | -8.615850e-47 |
| Msa1115980 | Msa1311170 | 0.801450 | 8.952524e-49 | -8.615850e-47 |
| Msa1119670 | Msa1311170 | 0.807633 | 4.596024e-50 | -8.615850e-47 |
| Msa1130150 | Msa1311170 | -0.800972 | 1.121575e-48 | -8.615850e-47 |
| Msa1132250 | Msa1311170 | -0.801724 | 7.865977e-49 | -8.615850e-47 |
| Msa1136630 | Msa1311170 | 0.804838 | 1.782825e-49 | -8.615850e-47 |
| Msa1137750 | Msa1311170 | 0.808322 | 3.278322e-50 | -8.615850e-47 |
| Msa1150750 | Msa1311170 | 0.800333 | 1.514216e-48 | -8.615850e-47 |
| Msa1152330 | Msa1311170 | 0.802787 | 4.752365e-49 | -8.615850e-47 |
| Msa1156100 | Msa1311170 | -0.804269 | 2.342253e-49 | -8.615850e-47 |
| Msa1162430 | Msa1311170 | 0.809499 | 1.835807e-50 | -8.615850e-47 |
| Msa1174280 | Msa1311170 | 0.805911 | 1.061967e-49 | -8.615850e-47 |
| Msa1185270 | Msa1311170 | 0.800721 | 1.261966e-48 | -8.615850e-47 |
| Msa1191270 | Msa1311170 | 0.810129 | 1.343680e-50 | -8.615850e-47 |
| Msa1204870 | Msa1311170 | -0.806659 | 7.386883e-50 | -8.615850e-47 |
| Msa1204900 | Msa1311170 | -0.801483 | 8.816069e-49 | -8.615850e-47 |
| Msa1208140 | Msa1311170 | 0.802144 | 6.448115e-49 | -8.615850e-47 |
| Msa1211610 | Msa1311170 | 0.807421 | 5.096608e-50 | -8.615850e-47 |
| Msa1215540 | Msa1311170 | -0.804498 | 2.098681e-49 | -8.615850e-47 |
| Msa1223710 | Msa1311170 | 0.812198 | 4.782251e-51 | -8.615850e-47 |
| Msa1223990 | Msa1311170 | 0.813098 | 3.039371e-51 | -8.615850e-47 |
| Msa0492330 | Msa1311170 | -0.800918 | 1.150501e-48 | -8.615850e-47 |
| Msa0497680 | Msa1311170 | 0.807386 | 5.185760e-50 | -8.615850e-47 |
| Msa0506700 | Msa1311170 | -0.800128 | 1.666471e-48 | -8.615850e-47 |
| Msa0512280 | Msa1311170 | 0.805134 | 1.545509e-49 | -8.615850e-47 |
| Msa0524710 | Msa1311170 | 0.844292 | 8.276923e-59 | -8.615850e-47 |
| Msa0540640 | Msa1311170 | 0.827166 | 1.817458e-54 | -8.615850e-47 |
| Msa0561830 | Msa1311170 | 0.804515 | 2.081714e-49 | -8.615850e-47 |
| Msa0577030 | Msa1311170 | 0.803355 | 3.626248e-49 | -8.615850e-47 |
| Msa0580890 | Msa1311170 | -0.807396 | 5.158289e-50 | -8.615850e-47 |
| Msa0587730 | Msa1311170 | 0.823350 | 1.451966e-53 | -8.615850e-47 |
| Msa0588040 | Msa1311170 | 0.803013 | 4.269696e-49 | -8.615850e-47 |
| Msa0591040 | Msa1311170 | 0.804030 | 2.626706e-49 | -8.615850e-47 |
| Msa0597800 | Msa1311170 | 0.852529 | 4.348081e-61 | -8.615850e-47 |
| Msa0597820 | Msa1311170 | 0.852667 | 3.973141e-61 | -8.615850e-47 |
| Msa0848270 | Msa1311170 | 0.800410 | 1.460224e-48 | -8.615850e-47 |
| Msa0874750 | Msa1311170 | 0.808535 | 2.953152e-50 | -8.615850e-47 |
| Msa0896920 | Msa1311170 | 0.817597 | 3.036580e-52 | -8.615850e-47 |
| Msa0925940 | Msa1311170 | 0.814730 | 1.327767e-51 | -8.615850e-47 |
| Msa0945160 | Msa1311170 | -0.800610 | 1.329441e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1311170 | MtrunA17_Chr7g0218941 | 62.305 | 512 | 180 | 7 | 4 | 504 | 457 | 966 | 0.0 | 588 |
| Msa1311170 | MtrunA17_Chr8g0338431 | 57.031 | 512 | 210 | 5 | 1 | 504 | 17 | 526 | 0.0 | 541 |
| Msa1311170 | MtrunA17_Chr8g0338861 | 54.706 | 510 | 222 | 7 | 1 | 504 | 165 | 671 | 1.17e-171 | 499 |
| Msa1311170 | MtrunA17_Chr8g0346831 | 55.311 | 499 | 210 | 8 | 1 | 492 | 460 | 952 | 6.64e-162 | 484 |
| Msa1311170 | MtrunA17_Chr8g0352211 | 54.883 | 512 | 219 | 8 | 1 | 505 | 1456 | 1962 | 2.62e-159 | 497 |
| Msa1311170 | MtrunA17_Chr6g0471941 | 50.685 | 511 | 238 | 10 | 1 | 503 | 458 | 962 | 8.98e-149 | 450 |
| Msa1311170 | MtrunA17_Chr8g0338261 | 50.881 | 511 | 205 | 10 | 1 | 503 | 460 | 932 | 2.99e-146 | 442 |
| Msa1311170 | MtrunA17_Chr8g0338391 | 50.392 | 510 | 235 | 14 | 1 | 503 | 457 | 955 | 2.36e-128 | 397 |
| Msa1311170 | MtrunA17_Chr6g0475491 | 52.044 | 367 | 150 | 7 | 2 | 343 | 463 | 828 | 1.31e-98 | 315 |
| Msa1311170 | MtrunA17_Chr8g0337891 | 54.369 | 309 | 132 | 7 | 1 | 303 | 458 | 763 | 4.43e-91 | 294 |
| Msa1311170 | MtrunA17_Chr8g0338671 | 57.661 | 248 | 99 | 4 | 1 | 242 | 344 | 591 | 6.61e-84 | 271 |
| Msa1311170 | MtrunA17_Chr8g0338621 | 71.066 | 197 | 51 | 3 | 1 | 196 | 461 | 652 | 1.32e-79 | 261 |
| Msa1311170 | MtrunA17_Chr8g0338251 | 50.453 | 331 | 130 | 5 | 2 | 328 | 447 | 747 | 5.58e-77 | 256 |
| Msa1311170 | MtrunA17_Chr2g0316291 | 32.243 | 642 | 279 | 24 | 1 | 504 | 464 | 1087 | 2.79e-64 | 226 |
| Msa1311170 | MtrunA17_Chr6g0456121 | 30.702 | 570 | 300 | 15 | 1 | 504 | 442 | 982 | 4.60e-55 | 199 |
| Msa1311170 | MtrunA17_Chr8g0338361 | 58.757 | 177 | 68 | 4 | 1 | 172 | 325 | 501 | 1.47e-52 | 186 |
| Msa1311170 | MtrunA17_Chr6g0456131 | 41.017 | 295 | 155 | 8 | 212 | 504 | 767 | 1044 | 1.27e-49 | 183 |
| Msa1311170 | MtrunA17_Chr6g0456131 | 39.437 | 284 | 152 | 9 | 1 | 275 | 457 | 729 | 6.78e-39 | 151 |
| Msa1311170 | MtrunA17_Chr1g0155321 | 25.914 | 602 | 305 | 19 | 1 | 502 | 446 | 1006 | 1.87e-32 | 132 |
| Msa1311170 | MtrunA17_Chr5g0410481 | 27.704 | 527 | 264 | 16 | 84 | 503 | 556 | 1072 | 6.22e-32 | 130 |
| Msa1311170 | MtrunA17_Chr5g0430441 | 29.463 | 577 | 291 | 26 | 1 | 502 | 450 | 985 | 8.50e-32 | 130 |
| Msa1311170 | MtrunA17_Chr7g0244231 | 27.674 | 589 | 310 | 23 | 1 | 502 | 445 | 1004 | 3.39e-31 | 128 |
| Msa1311170 | MtrunA17_Chr5g0430141 | 26.368 | 603 | 303 | 23 | 1 | 502 | 452 | 1014 | 1.26e-30 | 126 |
| Msa1311170 | MtrunA17_Chr1g0155991 | 25.209 | 599 | 313 | 17 | 1 | 502 | 448 | 1008 | 1.31e-29 | 123 |
| Msa1311170 | MtrunA17_Chr5g0431051 | 26.555 | 595 | 287 | 20 | 1 | 503 | 452 | 988 | 3.38e-29 | 122 |
| Msa1311170 | MtrunA17_Chr5g0430641 | 26.655 | 589 | 316 | 22 | 1 | 502 | 450 | 1009 | 3.96e-29 | 122 |
| Msa1311170 | MtrunA17_Chr5g0410351 | 29.240 | 342 | 180 | 9 | 212 | 501 | 752 | 1083 | 2.92e-28 | 119 |
| Msa1311170 | MtrunA17_Chr5g0410161 | 28.235 | 340 | 183 | 7 | 212 | 499 | 900 | 1230 | 1.18e-27 | 117 |
| Msa1311170 | MtrunA17_Chr5g0430721 | 25.950 | 605 | 306 | 23 | 1 | 505 | 492 | 1054 | 1.60e-27 | 117 |
| Msa1311170 | MtrunA17_Chr5g0430581 | 26.298 | 597 | 286 | 21 | 1 | 504 | 445 | 980 | 2.28e-27 | 116 |
| Msa1311170 | MtrunA17_Chr5g0430621 | 27.875 | 574 | 327 | 21 | 1 | 502 | 451 | 1009 | 1.91e-26 | 114 |
| Msa1311170 | MtrunA17_Chr5g0415471 | 24.196 | 653 | 327 | 20 | 2 | 502 | 459 | 1095 | 1.56e-25 | 111 |
| Msa1311170 | MtrunA17_Chr5g0430511 | 25.868 | 576 | 337 | 18 | 1 | 504 | 452 | 1009 | 3.06e-25 | 110 |
| Msa1311170 | MtrunA17_Chr5g0430341 | 25.295 | 593 | 276 | 22 | 12 | 504 | 6 | 531 | 3.10e-25 | 108 |
| Msa1311170 | MtrunA17_Chr5g0429961 | 24.916 | 594 | 292 | 20 | 1 | 502 | 451 | 982 | 8.80e-25 | 108 |
| Msa1311170 | MtrunA17_Chr7g0248221 | 33.460 | 263 | 166 | 5 | 1 | 258 | 468 | 726 | 2.44e-24 | 107 |
| Msa1311170 | MtrunA17_Chr1g0169951 | 30.345 | 290 | 171 | 7 | 1 | 285 | 477 | 740 | 1.48e-23 | 104 |
| Msa1311170 | MtrunA17_Chr5g0414311 | 25.000 | 664 | 309 | 22 | 2 | 502 | 461 | 1098 | 2.34e-23 | 104 |
| Msa1311170 | MtrunA17_Chr3g0082891 | 35.057 | 174 | 107 | 4 | 1 | 169 | 448 | 620 | 1.20e-21 | 99.0 |
| Msa1311170 | MtrunA17_Chr5g0430901 | 26.953 | 512 | 274 | 23 | 1 | 473 | 411 | 861 | 4.56e-21 | 97.1 |
| Msa1311170 | MtrunA17_Chr7g0257201 | 29.010 | 293 | 168 | 8 | 1 | 285 | 479 | 739 | 1.23e-20 | 95.9 |
| Msa1311170 | MtrunA17_Chr6g0470021 | 24.727 | 550 | 335 | 20 | 1 | 487 | 338 | 871 | 1.72e-20 | 95.5 |
| Msa1311170 | MtrunA17_Chr5g0410301 | 25.059 | 427 | 227 | 11 | 84 | 457 | 568 | 954 | 3.81e-20 | 94.4 |
| Msa1311170 | MtrunA17_Chr5g0410401 | 28.771 | 358 | 185 | 12 | 104 | 404 | 462 | 806 | 8.15e-20 | 93.2 |
| Msa1311170 | MtrunA17_Chr2g0309151 | 30.418 | 263 | 160 | 6 | 1 | 259 | 247 | 490 | 1.31e-19 | 91.7 |
| Msa1311170 | MtrunA17_Chr5g0430291 | 29.897 | 291 | 167 | 11 | 214 | 500 | 754 | 1011 | 1.47e-19 | 92.4 |
| Msa1311170 | MtrunA17_Chr4g0010201 | 33.824 | 204 | 108 | 8 | 1 | 184 | 451 | 647 | 1.54e-19 | 92.4 |
| Msa1311170 | MtrunA17_Chr4g0010251 | 32.683 | 205 | 114 | 6 | 1 | 188 | 450 | 647 | 1.99e-19 | 92.0 |
| Msa1311170 | MtrunA17_Chr5g0410261 | 26.304 | 460 | 260 | 11 | 84 | 478 | 599 | 1044 | 2.08e-19 | 92.0 |
| Msa1311170 | MtrunA17_Chr5g0414301 | 25.308 | 569 | 335 | 21 | 2 | 499 | 15 | 564 | 3.07e-19 | 90.9 |
| Msa1311170 | MtrunA17_Chr6g0470011 | 22.489 | 667 | 332 | 19 | 1 | 504 | 447 | 1091 | 3.62e-19 | 91.3 |
| Msa1311170 | MtrunA17_Chr3g0087301 | 24.811 | 528 | 265 | 17 | 97 | 502 | 560 | 1077 | 4.42e-19 | 91.3 |
| Msa1311170 | MtrunA17_Chr4g0010481 | 33.696 | 184 | 97 | 6 | 12 | 175 | 3 | 181 | 7.14e-19 | 84.3 |
| Msa1311170 | MtrunA17_Chr6g0470081 | 23.143 | 579 | 300 | 17 | 1 | 482 | 447 | 977 | 9.22e-19 | 90.1 |
| Msa1311170 | MtrunA17_Chr6g0470001 | 25.180 | 556 | 317 | 20 | 1 | 482 | 54 | 584 | 1.14e-18 | 89.4 |
| Msa1311170 | MtrunA17_Chr7g0257221 | 30.037 | 273 | 159 | 7 | 1 | 260 | 479 | 732 | 1.16e-18 | 89.7 |
| Msa1311170 | MtrunA17_Chr6g0468021 | 22.831 | 657 | 324 | 21 | 1 | 502 | 444 | 1072 | 1.31e-18 | 89.7 |
| Msa1311170 | MtrunA17_Chr8g0352861 | 27.451 | 510 | 286 | 22 | 1 | 478 | 470 | 927 | 1.78e-18 | 89.4 |
| Msa1311170 | MtrunA17_Chr4g0009781 | 32.057 | 209 | 114 | 6 | 1 | 188 | 451 | 652 | 1.87e-18 | 89.0 |
| Msa1311170 | MtrunA17_Chr5g0433771 | 29.348 | 276 | 172 | 9 | 1 | 263 | 473 | 738 | 2.27e-18 | 88.6 |
| Msa1311170 | MtrunA17_Chr3g0082871 | 31.667 | 180 | 106 | 4 | 1 | 169 | 448 | 621 | 2.43e-18 | 88.6 |
| Msa1311170 | MtrunA17_Chr7g0257541 | 27.222 | 360 | 206 | 12 | 1 | 337 | 478 | 804 | 2.98e-18 | 88.2 |
| Msa1311170 | MtrunA17_Chr7g0257191 | 29.861 | 288 | 172 | 7 | 1 | 285 | 480 | 740 | 3.38e-18 | 88.2 |
| Msa1311170 | MtrunA17_Chr6g0468151 | 26.575 | 365 | 195 | 17 | 201 | 504 | 738 | 1090 | 6.64e-18 | 87.4 |
| Msa1311170 | MtrunA17_Chr6g0468151 | 30.208 | 192 | 120 | 4 | 1 | 187 | 451 | 633 | 4.21e-13 | 72.0 |
| Msa1311170 | MtrunA17_Chr3g0082811 | 31.034 | 174 | 115 | 2 | 1 | 169 | 448 | 621 | 1.25e-17 | 86.3 |
| Msa1311170 | MtrunA17_Chr4g0010261 | 32.524 | 206 | 110 | 7 | 1 | 184 | 450 | 648 | 2.67e-17 | 85.5 |
| Msa1311170 | MtrunA17_Chr3g0082881 | 31.609 | 174 | 114 | 2 | 1 | 169 | 448 | 621 | 5.89e-17 | 84.3 |
| Msa1311170 | MtrunA17_Chr1g0189551 | 32.812 | 192 | 124 | 4 | 1 | 191 | 489 | 676 | 6.43e-17 | 84.3 |
| Msa1311170 | MtrunA17_Chr1g0189551 | 34.043 | 94 | 59 | 1 | 411 | 504 | 778 | 868 | 6.27e-11 | 65.1 |
| Msa1311170 | MtrunA17_Chr6g0468131 | 26.389 | 360 | 190 | 16 | 205 | 502 | 3 | 349 | 6.95e-17 | 82.0 |
| Msa1311170 | MtrunA17_Chr3g0085471 | 26.079 | 533 | 310 | 22 | 2 | 478 | 466 | 970 | 1.65e-16 | 83.2 |
| Msa1311170 | MtrunA17_Chr3g0085751 | 24.859 | 531 | 270 | 22 | 2 | 478 | 444 | 899 | 2.10e-16 | 82.8 |
| Msa1311170 | MtrunA17_Chr5g0414181 | 25.636 | 550 | 282 | 21 | 3 | 458 | 457 | 973 | 2.14e-16 | 82.4 |
| Msa1311170 | MtrunA17_Chr3g0086161 | 25.532 | 470 | 279 | 21 | 2 | 435 | 447 | 881 | 2.23e-16 | 82.8 |
| Msa1311170 | MtrunA17_Chr4g0010221 | 32.683 | 205 | 110 | 7 | 1 | 184 | 449 | 646 | 2.27e-16 | 82.4 |
| Msa1311170 | MtrunA17_Chr6g0468201 | 22.050 | 644 | 344 | 18 | 1 | 504 | 54 | 679 | 3.36e-16 | 81.6 |
| Msa1311170 | MtrunA17_Chr3g0085161 | 25.092 | 542 | 263 | 21 | 2 | 482 | 310 | 769 | 3.56e-16 | 82.0 |
| Msa1311170 | MtrunA17_Chr3g0085551 | 26.209 | 393 | 253 | 12 | 2 | 368 | 341 | 722 | 3.68e-16 | 81.6 |
| Msa1311170 | MtrunA17_Chr6g0468121 | 24.815 | 540 | 321 | 20 | 1 | 479 | 445 | 960 | 4.24e-16 | 81.6 |
| Msa1311170 | MtrunA17_Chr6g0468271 | 24.051 | 553 | 324 | 19 | 1 | 479 | 443 | 973 | 5.70e-16 | 81.3 |
| Msa1311170 | MtrunA17_Chr3g0084051 | 34.848 | 198 | 111 | 6 | 2 | 187 | 465 | 656 | 7.75e-16 | 80.9 |
| Msa1311170 | MtrunA17_Chr5g0430951 | 35.644 | 202 | 104 | 8 | 1 | 191 | 450 | 636 | 1.32e-15 | 80.1 |
| Msa1311170 | MtrunA17_Chr8g0355411 | 27.863 | 262 | 157 | 7 | 1 | 256 | 462 | 697 | 2.25e-15 | 79.3 |
| Msa1311170 | MtrunA17_Chr8g0356251 | 33.498 | 203 | 120 | 9 | 2 | 193 | 487 | 685 | 2.84e-15 | 79.3 |
| Msa1311170 | MtrunA17_Chr3g0091011 | 24.386 | 529 | 277 | 21 | 2 | 466 | 428 | 897 | 3.49e-15 | 78.6 |
| Msa1311170 | MtrunA17_Chr3g0085521 | 26.283 | 487 | 259 | 20 | 2 | 435 | 441 | 880 | 3.66e-15 | 79.0 |
| Msa1311170 | MtrunA17_Chr3g0085501 | 25.933 | 509 | 311 | 20 | 2 | 478 | 466 | 940 | 6.34e-15 | 78.2 |
| Msa1311170 | MtrunA17_Chr2g0309721 | 27.817 | 284 | 178 | 8 | 1 | 259 | 463 | 744 | 9.15e-15 | 77.4 |
| Msa1311170 | MtrunA17_Chr3g0091121 | 24.408 | 549 | 317 | 23 | 1 | 505 | 75 | 569 | 1.01e-14 | 77.0 |
| Msa1311170 | MtrunA17_Chr4g0008461 | 24.462 | 372 | 205 | 9 | 159 | 479 | 713 | 1059 | 1.86e-14 | 76.6 |
| Msa1311170 | MtrunA17_Chr3g0085711 | 25.714 | 490 | 258 | 22 | 2 | 435 | 16 | 455 | 2.26e-14 | 75.9 |
| Msa1311170 | MtrunA17_Chr3g0085131 | 32.381 | 210 | 121 | 7 | 2 | 196 | 446 | 649 | 2.31e-14 | 76.3 |
| Msa1311170 | MtrunA17_Chr3g0086071 | 31.418 | 261 | 137 | 10 | 2 | 243 | 67 | 304 | 3.52e-14 | 75.1 |
| Msa1311170 | MtrunA17_Chr5g0417301 | 37.791 | 172 | 82 | 6 | 1 | 160 | 402 | 560 | 3.54e-14 | 75.1 |
| Msa1311170 | MtrunA17_Chr3g0085171 | 31.556 | 225 | 105 | 7 | 2 | 196 | 434 | 639 | 3.72e-14 | 75.5 |
| Msa1311170 | MtrunA17_Chr3g0084031 | 34.010 | 197 | 114 | 8 | 2 | 187 | 467 | 658 | 3.78e-14 | 75.5 |
| Msa1311170 | MtrunA17_Chr3g0085651 | 25.000 | 548 | 318 | 24 | 2 | 483 | 458 | 978 | 3.99e-14 | 75.5 |
| Msa1311170 | MtrunA17_Chr3g0083721 | 30.348 | 201 | 129 | 6 | 2 | 193 | 404 | 602 | 4.10e-14 | 75.5 |
| Msa1311170 | MtrunA17_Chr3g0085091 | 24.125 | 543 | 269 | 23 | 1 | 482 | 451 | 911 | 4.11e-14 | 75.5 |
| Msa1311170 | MtrunA17_Chr4g0027251 | 29.412 | 306 | 173 | 11 | 214 | 500 | 757 | 1038 | 4.38e-14 | 75.5 |
| Msa1311170 | MtrunA17_Chr4g0027251 | 34.343 | 198 | 110 | 6 | 1 | 188 | 451 | 638 | 8.36e-13 | 71.2 |
| Msa1311170 | MtrunA17_Chr4g0071011 | 27.027 | 296 | 178 | 8 | 208 | 500 | 238 | 498 | 4.61e-14 | 74.7 |
| Msa1311170 | MtrunA17_Chr7g0248531 | 33.333 | 228 | 131 | 10 | 2 | 210 | 451 | 676 | 7.89e-14 | 74.3 |
| Msa1311170 | MtrunA17_Chr5g0417251 | 31.905 | 210 | 118 | 6 | 2 | 186 | 222 | 431 | 8.73e-14 | 73.9 |
| Msa1311170 | MtrunA17_Chr3g0084971 | 24.458 | 507 | 295 | 22 | 2 | 476 | 455 | 905 | 8.84e-14 | 74.3 |
| Msa1311170 | MtrunA17_Chr3g0085931 | 32.323 | 198 | 110 | 5 | 1 | 188 | 447 | 630 | 9.89e-14 | 74.3 |
| Msa1311170 | MtrunA17_Chr4g0025391 | 30.837 | 227 | 137 | 7 | 2 | 210 | 463 | 687 | 1.20e-13 | 73.9 |
| Msa1311170 | MtrunA17_Chr6g0468451 | 21.174 | 562 | 332 | 11 | 1 | 479 | 445 | 978 | 1.28e-13 | 73.9 |
| Msa1311170 | MtrunA17_Chr3g0086221 | 24.580 | 476 | 277 | 19 | 2 | 435 | 446 | 881 | 1.32e-13 | 73.9 |
| Msa1311170 | MtrunA17_Chr3g0090431 | 32.328 | 232 | 130 | 9 | 1 | 210 | 335 | 561 | 3.23e-13 | 72.4 |
| Msa1311170 | MtrunA17_Chr2g0282891 | 31.905 | 210 | 127 | 7 | 1 | 199 | 131 | 335 | 3.83e-13 | 70.9 |
| Msa1311170 | MtrunA17_Chr3g0086741 | 33.163 | 196 | 117 | 6 | 2 | 184 | 473 | 667 | 5.19e-13 | 71.6 |
| Msa1311170 | MtrunA17_Chr3g0089591 | 25.519 | 482 | 234 | 17 | 110 | 479 | 676 | 1144 | 5.25e-13 | 72.0 |
| Msa1311170 | MtrunA17_Chr3g0089591 | 33.505 | 194 | 114 | 7 | 1 | 184 | 468 | 656 | 1.63e-11 | 67.0 |
| Msa1311170 | MtrunA17_Chr3g0123111 | 31.658 | 199 | 114 | 6 | 1 | 191 | 446 | 630 | 6.34e-13 | 71.6 |
| Msa1311170 | MtrunA17_Chr3g0123111 | 37.500 | 88 | 55 | 0 | 418 | 505 | 1004 | 1091 | 1.12e-11 | 67.8 |
| Msa1311170 | MtrunA17_Chr1g0169901 | 30.964 | 197 | 123 | 4 | 1 | 188 | 456 | 648 | 8.92e-13 | 71.2 |
| Msa1311170 | MtrunA17_Chr3g0083621 | 26.239 | 343 | 201 | 12 | 181 | 479 | 754 | 1088 | 9.78e-13 | 71.2 |
| Msa1311170 | MtrunA17_Chr3g0101181 | 22.998 | 487 | 324 | 13 | 1 | 473 | 479 | 928 | 1.88e-12 | 70.1 |
| Msa1311170 | MtrunA17_Chr3g0089471 | 25.726 | 482 | 233 | 18 | 110 | 479 | 673 | 1141 | 2.16e-12 | 70.1 |
| Msa1311170 | MtrunA17_Chr6g0484551 | 33.624 | 229 | 131 | 9 | 1 | 210 | 437 | 663 | 2.91e-12 | 69.3 |
| Msa1311170 | MtrunA17_Chr3g0082791 | 31.980 | 197 | 119 | 6 | 2 | 188 | 467 | 658 | 2.91e-12 | 69.3 |
| Msa1311170 | MtrunA17_Chr6g0467911 | 29.442 | 197 | 119 | 5 | 1 | 188 | 447 | 632 | 3.46e-12 | 68.9 |
| Msa1311170 | MtrunA17_Chr6g0468361 | 31.633 | 196 | 110 | 5 | 1 | 186 | 54 | 235 | 3.55e-12 | 68.6 |
| Msa1311170 | MtrunA17_Chr3g0085111 | 23.892 | 519 | 288 | 20 | 2 | 478 | 447 | 900 | 3.76e-12 | 69.3 |
| Msa1311170 | MtrunA17_Chr6g0468261 | 26.774 | 310 | 172 | 11 | 214 | 501 | 64 | 340 | 5.05e-12 | 67.4 |
| Msa1311170 | MtrunA17_Chr3g0089961 | 27.021 | 470 | 270 | 21 | 1 | 430 | 466 | 902 | 5.21e-12 | 68.6 |
| Msa1311170 | MtrunA17_Chr6g0467961 | 31.633 | 196 | 113 | 7 | 1 | 188 | 444 | 626 | 5.33e-12 | 68.6 |
| Msa1311170 | MtrunA17_Chr5g0446611 | 30.882 | 204 | 126 | 6 | 1 | 193 | 462 | 661 | 7.59e-12 | 68.2 |
| Msa1311170 | MtrunA17_Chr3g0083751 | 25.915 | 355 | 194 | 12 | 179 | 481 | 748 | 1085 | 9.07e-12 | 68.2 |
| Msa1311170 | MtrunA17_Chr5g0413811 | 24.008 | 529 | 280 | 19 | 2 | 502 | 232 | 666 | 1.15e-11 | 67.4 |
| Msa1311170 | MtrunA17_Chr8g0352831 | 31.532 | 222 | 125 | 8 | 1 | 204 | 474 | 686 | 1.22e-11 | 67.4 |
| Msa1311170 | MtrunA17_Chr3g0089871 | 24.184 | 521 | 279 | 23 | 2 | 471 | 463 | 918 | 1.27e-11 | 67.4 |
| Msa1311170 | MtrunA17_Chr3g0092241 | 31.004 | 229 | 137 | 7 | 1 | 210 | 463 | 689 | 1.37e-11 | 67.4 |
| Msa1311170 | MtrunA17_Chr3g0086181 | 25.370 | 473 | 273 | 22 | 2 | 435 | 447 | 878 | 1.52e-11 | 67.0 |
| Msa1311170 | MtrunA17_Chr3g0087841 | 31.466 | 232 | 132 | 9 | 1 | 210 | 463 | 689 | 1.52e-11 | 67.4 |
| Msa1311170 | MtrunA17_Chr3g0083681 | 31.527 | 203 | 124 | 8 | 2 | 193 | 438 | 636 | 1.67e-11 | 67.0 |
| Msa1311170 | MtrunA17_Chr5g0414201 | 29.064 | 203 | 121 | 6 | 2 | 182 | 457 | 658 | 1.67e-11 | 67.0 |
| Msa1311170 | MtrunA17_Chr6g0468251 | 38.043 | 92 | 55 | 1 | 409 | 500 | 345 | 434 | 1.82e-11 | 66.2 |
| Msa1311170 | MtrunA17_Chr3g0089251 | 23.985 | 542 | 329 | 20 | 1 | 504 | 492 | 988 | 2.11e-11 | 67.0 |
| Msa1311170 | MtrunA17_Chr3g0092291 | 31.658 | 199 | 127 | 6 | 2 | 193 | 16 | 212 | 2.14e-11 | 65.9 |
| Msa1311170 | MtrunA17_Chr4g0051651 | 29.412 | 187 | 95 | 7 | 2 | 159 | 493 | 671 | 3.03e-11 | 65.9 |
| Msa1311170 | MtrunA17_Chr6g0468101 | 23.048 | 525 | 321 | 18 | 1 | 478 | 446 | 934 | 3.11e-11 | 66.2 |
| Msa1311170 | MtrunA17_Chr3g0087581 | 25.194 | 516 | 254 | 24 | 2 | 463 | 450 | 887 | 3.35e-11 | 66.2 |
| Msa1311170 | MtrunA17_Chr1g0164391 | 31.707 | 205 | 123 | 7 | 2 | 193 | 464 | 664 | 3.81e-11 | 65.9 |
| Msa1311170 | MtrunA17_Chr3g0087731 | 33.846 | 195 | 107 | 9 | 2 | 184 | 259 | 443 | 3.94e-11 | 65.9 |
| Msa1311170 | MtrunA17_Chr3g0082131 | 24.532 | 534 | 320 | 23 | 1 | 478 | 461 | 967 | 6.44e-11 | 65.1 |
| Msa1311170 | MtrunA17_Chr3g0101321 | 21.260 | 508 | 320 | 15 | 1 | 500 | 466 | 901 | 6.68e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1311170 | AT3G14460.1 | 33.161 | 193 | 114 | 5 | 1 | 182 | 458 | 646 | 5.69e-16 | 82.0 |
Find 81 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGGAAAATATTACATTTA+AGG | 0.046481 | 8_4:+7852753 | Msa1311170:CDS |
| GATTTCTAGGGTCTGTAATT+TGG | 0.172540 | 8_4:-7852893 | None:intergenic |
| TTTGCTTACAAACACTATTA+TGG | 0.185906 | 8_4:+7851954 | Msa1311170:CDS |
| AATTTCAGGAAATTGGAATT+TGG | 0.222302 | 8_4:+7852701 | Msa1311170:CDS |
| TGAATCCTTCTTCCCATCTT+TGG | 0.222705 | 8_4:+7852291 | Msa1311170:CDS |
| AACAAGATTACTTATGGATT+TGG | 0.241057 | 8_4:-7851933 | None:intergenic |
| TCTCACATTCTTCAAGTAAA+AGG | 0.243609 | 8_4:-7852927 | None:intergenic |
| TAAGCAAACAAGATTACTTA+TGG | 0.261974 | 8_4:-7851939 | None:intergenic |
| TCAACAAAATCGTCACAAAT+TGG | 0.283581 | 8_4:-7851508 | None:intergenic |
| TACTTGCGCCTTGGCGGATA+TGG | 0.292252 | 8_4:+7852592 | Msa1311170:CDS |
| AAGAAGACAACATCTCTATT+TGG | 0.295065 | 8_4:+7852073 | Msa1311170:CDS |
| TATTAATTTAAGATTATGTT+TGG | 0.295785 | 8_4:-7852988 | None:intergenic |
| AATAGATAATCTTCGTGAAT+TGG | 0.314703 | 8_4:+7852237 | Msa1311170:CDS |
| CATCATGTGCTGCGAAGATT+TGG | 0.335189 | 8_4:+7852840 | Msa1311170:CDS |
| AGCTGAAGGGATGGAGGATG+AGG | 0.337913 | 8_4:+7852341 | Msa1311170:CDS |
| TCCAGGAGAGGAAGATTGTT+GGG | 0.360798 | 8_4:-7852736 | None:intergenic |
| CGCAGCACATGATGGTGATT+TGG | 0.376701 | 8_4:-7852831 | None:intergenic |
| ATCTAGATGCATTGCCAGAT+TGG | 0.379624 | 8_4:+7852785 | Msa1311170:CDS |
| GGCAAGGCGAGGCATTCCTT+CGG | 0.389540 | 8_4:-7852872 | None:intergenic |
| GCAAGGCGAGGCATTCCTTC+GGG | 0.392651 | 8_4:-7852871 | None:intergenic |
| CATCACCAATTTGAGCATCT+TGG | 0.401542 | 8_4:-7851544 | None:intergenic |
| TTCTAAGTGACTTAAGAAAC+TGG | 0.409683 | 8_4:-7852216 | None:intergenic |
| CTCACATTCTTCAAGTAAAA+GGG | 0.412044 | 8_4:-7852926 | None:intergenic |
| CGGTGATGATTGTTGTTACT+TGG | 0.425092 | 8_4:+7851625 | Msa1311170:CDS |
| AATGAGACAAACAGACTTGT+AGG | 0.428898 | 8_4:+7851650 | Msa1311170:CDS |
| AATATAATTTCCTCCAAAGA+TGG | 0.436885 | 8_4:-7852304 | None:intergenic |
| AACTGGAGACGTTCCATTGA+TGG | 0.437647 | 8_4:-7852199 | None:intergenic |
| ATTAATTTAAGATTATGTTT+GGG | 0.441374 | 8_4:-7852987 | None:intergenic |
| AGGGATGATGTCAATGATAA+TGG | 0.448722 | 8_4:+7852361 | Msa1311170:CDS |
| TGAACCCCTCTTCAAAATTG+AGG | 0.453490 | 8_4:+7851759 | Msa1311170:CDS |
| ATCCTTCTTCCCATCTTTGG+AGG | 0.458718 | 8_4:+7852294 | Msa1311170:CDS |
| AAGAGGTTGCAAATCCAATC+TGG | 0.460488 | 8_4:-7852799 | None:intergenic |
| TTAAAATACTTGCGCCTTGG+CGG | 0.464674 | 8_4:+7852586 | Msa1311170:CDS |
| CCCCAACAATCTTCCTCTCC+TGG | 0.465350 | 8_4:+7852735 | Msa1311170:CDS |
| ATTCTCTAGTGTGGAGGCAT+TGG | 0.474619 | 8_4:+7852504 | Msa1311170:CDS |
| TTCCTCCAAAGATGGGAAGA+AGG | 0.475749 | 8_4:-7852296 | None:intergenic |
| TGGAGTCATTGGATGCAAGC+AGG | 0.476678 | 8_4:+7851717 | Msa1311170:CDS |
| ATTGGAATTTATATATTATG+AGG | 0.477921 | 8_4:+7852255 | Msa1311170:CDS |
| ATCCCTTCAGCTTTCCACAT+TGG | 0.489705 | 8_4:-7852330 | None:intergenic |
| AATATTGTTCAAATCTCTCT+CGG | 0.496498 | 8_4:+7852151 | Msa1311170:CDS |
| GAACCCCTCTTCAAAATTGA+GGG | 0.501672 | 8_4:+7851760 | Msa1311170:CDS |
| TGTTGTCTTCTTCTGTTCAG+AGG | 0.501720 | 8_4:-7852062 | None:intergenic |
| TGTGCAGTATCTCCCATCAA+TGG | 0.503398 | 8_4:+7852186 | Msa1311170:CDS |
| GCGCCTTGGCGGATATGGTC+TGG | 0.505725 | 8_4:+7852597 | Msa1311170:CDS |
| TTCCAGGAGAGGAAGATTGT+TGG | 0.510902 | 8_4:-7852737 | None:intergenic |
| TGATTTGGTGAAGTGATAAG+AGG | 0.512143 | 8_4:-7852816 | None:intergenic |
| CTAGGGTCTGTAATTTGGCA+AGG | 0.530367 | 8_4:-7852888 | None:intergenic |
| ACTGGAGACGTTCCATTGAT+GGG | 0.538344 | 8_4:-7852198 | None:intergenic |
| TCTCCAATGTGGAAAGCTGA+AGG | 0.541166 | 8_4:+7852327 | Msa1311170:CDS |
| CTTTCCAACATTACATGCAC+AGG | 0.542088 | 8_4:-7851677 | None:intergenic |
| ATGTTAAAATACTTGCGCCT+TGG | 0.543861 | 8_4:+7852583 | Msa1311170:CDS |
| GCTGAAGGGATGGAGGATGA+GGG | 0.547225 | 8_4:+7852342 | Msa1311170:CDS |
| CATTGGATGCAAGCAGGGTG+CGG | 0.549265 | 8_4:+7851723 | Msa1311170:CDS |
| GCAGCGACATTAAACATGGC+AGG | 0.554078 | 8_4:+7852526 | Msa1311170:CDS |
| ATGTTGGAAAGTGATGCTTT+TGG | 0.555861 | 8_4:+7851689 | Msa1311170:CDS |
| ATATAATTTCCTCCAAAGAT+GGG | 0.556185 | 8_4:-7852303 | None:intergenic |
| CTCTTCAAAATTGAGGGAGA+AGG | 0.561827 | 8_4:+7851766 | Msa1311170:CDS |
| GGAGTCATTGGATGCAAGCA+GGG | 0.567478 | 8_4:+7851718 | Msa1311170:CDS |
| CCAGGAGAGGAAGATTGTTG+GGG | 0.568230 | 8_4:-7852735 | None:intergenic |
| CAAATCTTCGCAGCACATGA+TGG | 0.573110 | 8_4:-7852839 | None:intergenic |
| GTCTGTAATTTGGCAAGGCG+AGG | 0.576104 | 8_4:-7852883 | None:intergenic |
| GAGTTTAACATTCTCTAGTG+TGG | 0.579819 | 8_4:+7852495 | Msa1311170:CDS |
| AAGTCCTGTGCATGTAATGT+TGG | 0.582756 | 8_4:+7851673 | Msa1311170:CDS |
| GGGGCAATCAATGATTTCTA+GGG | 0.587384 | 8_4:-7852905 | None:intergenic |
| GATCTTGCAATGAAAGTAGC+CGG | 0.588998 | 8_4:+7851605 | Msa1311170:CDS |
| AATGTGGAAAGCTGAAGGGA+TGG | 0.603135 | 8_4:+7852332 | Msa1311170:CDS |
| CTCCAATGTGGAAAGCTGAA+GGG | 0.606041 | 8_4:+7852328 | Msa1311170:CDS |
| CAAGATGCTCAAATTGGTGA+TGG | 0.609406 | 8_4:+7851545 | Msa1311170:CDS |
| GAAATTATATTTCTCCAATG+TGG | 0.612153 | 8_4:+7852316 | Msa1311170:CDS |
| TTTAACATTCTCTAGTGTGG+AGG | 0.617791 | 8_4:+7852498 | Msa1311170:CDS |
| CAAGTAACAACAATCATCAC+CGG | 0.619614 | 8_4:-7851624 | None:intergenic |
| GATTTGGCTTCGCTGCCCGA+AGG | 0.619987 | 8_4:+7852856 | Msa1311170:CDS |
| AAAGACGAGGAAATGAGAGA+TGG | 0.621475 | 8_4:-7852402 | None:intergenic |
| TCACATTCTTCAAGTAAAAG+GGG | 0.627317 | 8_4:-7852925 | None:intergenic |
| CACATTCTTCAAGTAAAAGG+GGG | 0.650045 | 8_4:-7852924 | None:intergenic |
| CATCCAGACCATATCCGCCA+AGG | 0.652895 | 8_4:-7852600 | None:intergenic |
| GTGGAAAGCTGAAGGGATGG+AGG | 0.653506 | 8_4:+7852335 | Msa1311170:CDS |
| AAGTCTAATTTAGAAAGACG+AGG | 0.670406 | 8_4:-7852415 | None:intergenic |
| ATTGGCAGCGACATTAAACA+TGG | 0.671387 | 8_4:+7852522 | Msa1311170:CDS |
| AAGCAGCGCATGGAAGACAT+CGG | 0.678699 | 8_4:+7851482 | None:intergenic |
| AGACACAATCTAGTGCAACA+TGG | 0.745215 | 8_4:+7852947 | Msa1311170:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGGAATTTATATATTATG+AGG | + | chr8_4:7852255-7852274 | Msa1311170:CDS | 15.0% |
| !! | ATTGGAATTTATATATTATG+AGG | + | chr8_4:7852255-7852274 | Msa1311170:CDS | 15.0% |
| !! | CATAAAAAATTTCAGGAAAT+TGG | + | chr8_4:7852694-7852713 | Msa1311170:CDS | 20.0% |
| !! | CATAAAAAATTTCAGGAAAT+TGG | + | chr8_4:7852694-7852713 | Msa1311170:CDS | 20.0% |
| ! | AACAAGATTACTTATGGATT+TGG | - | chr8_4:7851936-7851955 | None:intergenic | 25.0% |
| ! | TAAGCAAACAAGATTACTTA+TGG | - | chr8_4:7851942-7851961 | None:intergenic | 25.0% |
| ! | TTTGCTTACAAACACTATTA+TGG | + | chr8_4:7851954-7851973 | Msa1311170:CDS | 25.0% |
| !!! | AAAATTCAACTTTTTCACAG+TGG | - | chr8_4:7851982-7852001 | None:intergenic | 25.0% |
| ! | AACATCTCTATTTGGAAAAA+TGG | + | chr8_4:7852081-7852100 | Msa1311170:CDS | 25.0% |
| ! | ACATCTCTATTTGGAAAAAT+GGG | + | chr8_4:7852082-7852101 | Msa1311170:CDS | 25.0% |
| !!! | AGAGTGTCATTTTTTCAAAT+TGG | + | chr8_4:7852113-7852132 | Msa1311170:CDS | 25.0% |
| ! | AATATTGTTCAAATCTCTCT+CGG | + | chr8_4:7852151-7852170 | Msa1311170:CDS | 25.0% |
| ! | AATAGATAATCTTCGTGAAT+TGG | + | chr8_4:7852237-7852256 | Msa1311170:CDS | 25.0% |
| ! | ATATAATTTCCTCCAAAGAT+GGG | - | chr8_4:7852306-7852325 | None:intergenic | 25.0% |
| ! | AATATAATTTCCTCCAAAGA+TGG | - | chr8_4:7852307-7852326 | None:intergenic | 25.0% |
| ! | GAAATTATATTTCTCCAATG+TGG | + | chr8_4:7852316-7852335 | Msa1311170:CDS | 25.0% |
| !! | TACTTTTCAAAAACTTGACA+CGG | + | chr8_4:7852468-7852487 | Msa1311170:CDS | 25.0% |
| !!! | AAGTATTTTAACATGGAAAG+AGG | - | chr8_4:7852577-7852596 | None:intergenic | 25.0% |
| ! | GCTTTCACATAAAAAATTTC+AGG | + | chr8_4:7852687-7852706 | Msa1311170:CDS | 25.0% |
| ! | AATTTCAGGAAATTGGAATT+TGG | + | chr8_4:7852701-7852720 | Msa1311170:CDS | 25.0% |
| !! | CCTTAAATGTAATATTTTCC+AGG | - | chr8_4:7852756-7852775 | None:intergenic | 25.0% |
| ! | CCTGGAAAATATTACATTTA+AGG | + | chr8_4:7852753-7852772 | Msa1311170:CDS | 25.0% |
| ! | AACAAGATTACTTATGGATT+TGG | - | chr8_4:7851936-7851955 | None:intergenic | 25.0% |
| ! | TAAGCAAACAAGATTACTTA+TGG | - | chr8_4:7851942-7851961 | None:intergenic | 25.0% |
| ! | TTTGCTTACAAACACTATTA+TGG | + | chr8_4:7851954-7851973 | Msa1311170:CDS | 25.0% |
| !!! | AAAATTCAACTTTTTCACAG+TGG | - | chr8_4:7851982-7852001 | None:intergenic | 25.0% |
| ! | AACATCTCTATTTGGAAAAA+TGG | + | chr8_4:7852081-7852100 | Msa1311170:CDS | 25.0% |
| ! | ACATCTCTATTTGGAAAAAT+GGG | + | chr8_4:7852082-7852101 | Msa1311170:CDS | 25.0% |
| !!! | AGAGTGTCATTTTTTCAAAT+TGG | + | chr8_4:7852113-7852132 | Msa1311170:CDS | 25.0% |
| ! | AATATTGTTCAAATCTCTCT+CGG | + | chr8_4:7852151-7852170 | Msa1311170:CDS | 25.0% |
| ! | AATAGATAATCTTCGTGAAT+TGG | + | chr8_4:7852237-7852256 | Msa1311170:CDS | 25.0% |
| ! | ATATAATTTCCTCCAAAGAT+GGG | - | chr8_4:7852306-7852325 | None:intergenic | 25.0% |
| ! | AATATAATTTCCTCCAAAGA+TGG | - | chr8_4:7852307-7852326 | None:intergenic | 25.0% |
| ! | GAAATTATATTTCTCCAATG+TGG | + | chr8_4:7852316-7852335 | Msa1311170:CDS | 25.0% |
| !! | TACTTTTCAAAAACTTGACA+CGG | + | chr8_4:7852468-7852487 | Msa1311170:CDS | 25.0% |
| !!! | AAGTATTTTAACATGGAAAG+AGG | - | chr8_4:7852577-7852596 | None:intergenic | 25.0% |
| ! | GCTTTCACATAAAAAATTTC+AGG | + | chr8_4:7852687-7852706 | Msa1311170:CDS | 25.0% |
| ! | AATTTCAGGAAATTGGAATT+TGG | + | chr8_4:7852701-7852720 | Msa1311170:CDS | 25.0% |
| !! | CCTTAAATGTAATATTTTCC+AGG | - | chr8_4:7852756-7852775 | None:intergenic | 25.0% |
| ! | CCTGGAAAATATTACATTTA+AGG | + | chr8_4:7852753-7852772 | Msa1311170:CDS | 25.0% |
| TCAACAAAATCGTCACAAAT+TGG | - | chr8_4:7851511-7851530 | None:intergenic | 30.0% | |
| ! | TTTTTCCAAGATGCTCAAAT+TGG | + | chr8_4:7851539-7851558 | Msa1311170:CDS | 30.0% |
| AAGAAGACAACATCTCTATT+TGG | + | chr8_4:7852073-7852092 | Msa1311170:CDS | 30.0% | |
| TTCTAAGTGACTTAAGAAAC+TGG | - | chr8_4:7852219-7852238 | None:intergenic | 30.0% | |
| AAGTCTAATTTAGAAAGACG+AGG | - | chr8_4:7852418-7852437 | None:intergenic | 30.0% | |
| !! | GTGTCAAGTTTTTGAAAAGT+AGG | - | chr8_4:7852469-7852488 | None:intergenic | 30.0% |
| !! | ATTTTAACATGGAAAGAGGA+GGG | - | chr8_4:7852573-7852592 | None:intergenic | 30.0% |
| !!! | TATTTTAACATGGAAAGAGG+AGG | - | chr8_4:7852574-7852593 | None:intergenic | 30.0% |
| ! | AATGTAATATTTTCCAGGAG+AGG | - | chr8_4:7852751-7852770 | None:intergenic | 30.0% |
| TCACATTCTTCAAGTAAAAG+GGG | - | chr8_4:7852928-7852947 | None:intergenic | 30.0% | |
| CTCACATTCTTCAAGTAAAA+GGG | - | chr8_4:7852929-7852948 | None:intergenic | 30.0% | |
| TCTCACATTCTTCAAGTAAA+AGG | - | chr8_4:7852930-7852949 | None:intergenic | 30.0% | |
| TCAACAAAATCGTCACAAAT+TGG | - | chr8_4:7851511-7851530 | None:intergenic | 30.0% | |
| ! | TTTTTCCAAGATGCTCAAAT+TGG | + | chr8_4:7851539-7851558 | Msa1311170:CDS | 30.0% |
| AAGAAGACAACATCTCTATT+TGG | + | chr8_4:7852073-7852092 | Msa1311170:CDS | 30.0% | |
| TTCTAAGTGACTTAAGAAAC+TGG | - | chr8_4:7852219-7852238 | None:intergenic | 30.0% | |
| AAGTCTAATTTAGAAAGACG+AGG | - | chr8_4:7852418-7852437 | None:intergenic | 30.0% | |
| !! | GTGTCAAGTTTTTGAAAAGT+AGG | - | chr8_4:7852469-7852488 | None:intergenic | 30.0% |
| !! | ATTTTAACATGGAAAGAGGA+GGG | - | chr8_4:7852573-7852592 | None:intergenic | 30.0% |
| !!! | TATTTTAACATGGAAAGAGG+AGG | - | chr8_4:7852574-7852593 | None:intergenic | 30.0% |
| ! | AATGTAATATTTTCCAGGAG+AGG | - | chr8_4:7852751-7852770 | None:intergenic | 30.0% |
| TCACATTCTTCAAGTAAAAG+GGG | - | chr8_4:7852928-7852947 | None:intergenic | 30.0% | |
| CTCACATTCTTCAAGTAAAA+GGG | - | chr8_4:7852929-7852948 | None:intergenic | 30.0% | |
| TCTCACATTCTTCAAGTAAA+AGG | - | chr8_4:7852930-7852949 | None:intergenic | 30.0% | |
| CAAGTAACAACAATCATCAC+CGG | - | chr8_4:7851627-7851646 | None:intergenic | 35.0% | |
| AATGAGACAAACAGACTTGT+AGG | + | chr8_4:7851650-7851669 | Msa1311170:CDS | 35.0% | |
| ! | ATGTTGGAAAGTGATGCTTT+TGG | + | chr8_4:7851689-7851708 | Msa1311170:CDS | 35.0% |
| !!! | AAGTGATGCTTTTGGTTTCT+TGG | + | chr8_4:7851697-7851716 | Msa1311170:CDS | 35.0% |
| !!! | TTTTGGTTTCTTGGAGTCAT+TGG | + | chr8_4:7851706-7851725 | Msa1311170:CDS | 35.0% |
| !! | TTCTCCCTCAATTTTGAAGA+GGG | - | chr8_4:7851767-7851786 | None:intergenic | 35.0% |
| TCTATTTGGAAAAATGGGTG+TGG | + | chr8_4:7852087-7852106 | Msa1311170:CDS | 35.0% | |
| CTATTTGGAAAAATGGGTGT+GGG | + | chr8_4:7852088-7852107 | Msa1311170:CDS | 35.0% | |
| AGGGATGATGTCAATGATAA+TGG | + | chr8_4:7852361-7852380 | Msa1311170:CDS | 35.0% | |
| GAGTTTAACATTCTCTAGTG+TGG | + | chr8_4:7852495-7852514 | Msa1311170:CDS | 35.0% | |
| TTTAACATTCTCTAGTGTGG+AGG | + | chr8_4:7852498-7852517 | Msa1311170:CDS | 35.0% | |
| !!! | AAGGCGCAAGTATTTTAACA+TGG | - | chr8_4:7852584-7852603 | None:intergenic | 35.0% |
| ATGTTAAAATACTTGCGCCT+TGG | + | chr8_4:7852583-7852602 | Msa1311170:CDS | 35.0% | |
| TGAAAAAACTCCCAAAGGAT+TGG | + | chr8_4:7852623-7852642 | Msa1311170:CDS | 35.0% | |
| GAAAAAACTCCCAAAGGATT+GGG | + | chr8_4:7852624-7852643 | Msa1311170:CDS | 35.0% | |
| !! | TGATTTGGTGAAGTGATAAG+AGG | - | chr8_4:7852819-7852838 | None:intergenic | 35.0% |
| !! | GATTTCTAGGGTCTGTAATT+TGG | - | chr8_4:7852896-7852915 | None:intergenic | 35.0% |
| CACATTCTTCAAGTAAAAGG+GGG | - | chr8_4:7852927-7852946 | None:intergenic | 35.0% | |
| CAAGTAACAACAATCATCAC+CGG | - | chr8_4:7851627-7851646 | None:intergenic | 35.0% | |
| AATGAGACAAACAGACTTGT+AGG | + | chr8_4:7851650-7851669 | Msa1311170:CDS | 35.0% | |
| ! | ATGTTGGAAAGTGATGCTTT+TGG | + | chr8_4:7851689-7851708 | Msa1311170:CDS | 35.0% |
| !!! | AAGTGATGCTTTTGGTTTCT+TGG | + | chr8_4:7851697-7851716 | Msa1311170:CDS | 35.0% |
| !!! | TTTTGGTTTCTTGGAGTCAT+TGG | + | chr8_4:7851706-7851725 | Msa1311170:CDS | 35.0% |
| !! | TTCTCCCTCAATTTTGAAGA+GGG | - | chr8_4:7851767-7851786 | None:intergenic | 35.0% |
| TCTATTTGGAAAAATGGGTG+TGG | + | chr8_4:7852087-7852106 | Msa1311170:CDS | 35.0% | |
| CTATTTGGAAAAATGGGTGT+GGG | + | chr8_4:7852088-7852107 | Msa1311170:CDS | 35.0% | |
| AGGGATGATGTCAATGATAA+TGG | + | chr8_4:7852361-7852380 | Msa1311170:CDS | 35.0% | |
| GAGTTTAACATTCTCTAGTG+TGG | + | chr8_4:7852495-7852514 | Msa1311170:CDS | 35.0% | |
| TTTAACATTCTCTAGTGTGG+AGG | + | chr8_4:7852498-7852517 | Msa1311170:CDS | 35.0% | |
| !!! | AAGGCGCAAGTATTTTAACA+TGG | - | chr8_4:7852584-7852603 | None:intergenic | 35.0% |
| ATGTTAAAATACTTGCGCCT+TGG | + | chr8_4:7852583-7852602 | Msa1311170:CDS | 35.0% | |
| TGAAAAAACTCCCAAAGGAT+TGG | + | chr8_4:7852623-7852642 | Msa1311170:CDS | 35.0% | |
| GAAAAAACTCCCAAAGGATT+GGG | + | chr8_4:7852624-7852643 | Msa1311170:CDS | 35.0% | |
| !! | TGATTTGGTGAAGTGATAAG+AGG | - | chr8_4:7852819-7852838 | None:intergenic | 35.0% |
| !! | GATTTCTAGGGTCTGTAATT+TGG | - | chr8_4:7852896-7852915 | None:intergenic | 35.0% |
| CACATTCTTCAAGTAAAAGG+GGG | - | chr8_4:7852927-7852946 | None:intergenic | 35.0% | |
| CATCACCAATTTGAGCATCT+TGG | - | chr8_4:7851547-7851566 | None:intergenic | 40.0% | |
| CAAGATGCTCAAATTGGTGA+TGG | + | chr8_4:7851545-7851564 | Msa1311170:CDS | 40.0% | |
| GATCTTGCAATGAAAGTAGC+CGG | + | chr8_4:7851605-7851624 | Msa1311170:CDS | 40.0% | |
| ! | CGGTGATGATTGTTGTTACT+TGG | + | chr8_4:7851625-7851644 | Msa1311170:CDS | 40.0% |
| AAGTCCTGTGCATGTAATGT+TGG | + | chr8_4:7851673-7851692 | Msa1311170:CDS | 40.0% | |
| CTTTCCAACATTACATGCAC+AGG | - | chr8_4:7851680-7851699 | None:intergenic | 40.0% | |
| TGAACCCCTCTTCAAAATTG+AGG | + | chr8_4:7851759-7851778 | Msa1311170:CDS | 40.0% | |
| GAACCCCTCTTCAAAATTGA+GGG | + | chr8_4:7851760-7851779 | Msa1311170:CDS | 40.0% | |
| !! | TCTCCCTCAATTTTGAAGAG+GGG | - | chr8_4:7851766-7851785 | None:intergenic | 40.0% |
| !! | CTTCTCCCTCAATTTTGAAG+AGG | - | chr8_4:7851768-7851787 | None:intergenic | 40.0% |
| CTCTTCAAAATTGAGGGAGA+AGG | + | chr8_4:7851766-7851785 | Msa1311170:CDS | 40.0% | |
| TGTTGTCTTCTTCTGTTCAG+AGG | - | chr8_4:7852065-7852084 | None:intergenic | 40.0% | |
| TGAATCCTTCTTCCCATCTT+TGG | + | chr8_4:7852291-7852310 | Msa1311170:CDS | 40.0% | |
| AAAGACGAGGAAATGAGAGA+TGG | - | chr8_4:7852405-7852424 | None:intergenic | 40.0% | |
| ATTGGCAGCGACATTAAACA+TGG | + | chr8_4:7852522-7852541 | Msa1311170:CDS | 40.0% | |
| TTAAAATACTTGCGCCTTGG+CGG | + | chr8_4:7852586-7852605 | Msa1311170:CDS | 40.0% | |
| GGATGTGAAAAAACTCCCAA+AGG | + | chr8_4:7852618-7852637 | Msa1311170:CDS | 40.0% | |
| ! | GATTTTGCACCCAATCCTTT+GGG | - | chr8_4:7852636-7852655 | None:intergenic | 40.0% |
| ! | AGATTTTGCACCCAATCCTT+TGG | - | chr8_4:7852637-7852656 | None:intergenic | 40.0% |
| ATCTAGATGCATTGCCAGAT+TGG | + | chr8_4:7852785-7852804 | Msa1311170:CDS | 40.0% | |
| AAGAGGTTGCAAATCCAATC+TGG | - | chr8_4:7852802-7852821 | None:intergenic | 40.0% | |
| GGGGCAATCAATGATTTCTA+GGG | - | chr8_4:7852908-7852927 | None:intergenic | 40.0% | |
| AGACACAATCTAGTGCAACA+TGG | + | chr8_4:7852947-7852966 | Msa1311170:CDS | 40.0% | |
| CATCACCAATTTGAGCATCT+TGG | - | chr8_4:7851547-7851566 | None:intergenic | 40.0% | |
| CAAGATGCTCAAATTGGTGA+TGG | + | chr8_4:7851545-7851564 | Msa1311170:CDS | 40.0% | |
| GATCTTGCAATGAAAGTAGC+CGG | + | chr8_4:7851605-7851624 | Msa1311170:CDS | 40.0% | |
| ! | CGGTGATGATTGTTGTTACT+TGG | + | chr8_4:7851625-7851644 | Msa1311170:CDS | 40.0% |
| AAGTCCTGTGCATGTAATGT+TGG | + | chr8_4:7851673-7851692 | Msa1311170:CDS | 40.0% | |
| CTTTCCAACATTACATGCAC+AGG | - | chr8_4:7851680-7851699 | None:intergenic | 40.0% | |
| TGAACCCCTCTTCAAAATTG+AGG | + | chr8_4:7851759-7851778 | Msa1311170:CDS | 40.0% | |
| GAACCCCTCTTCAAAATTGA+GGG | + | chr8_4:7851760-7851779 | Msa1311170:CDS | 40.0% | |
| !! | TCTCCCTCAATTTTGAAGAG+GGG | - | chr8_4:7851766-7851785 | None:intergenic | 40.0% |
| !! | CTTCTCCCTCAATTTTGAAG+AGG | - | chr8_4:7851768-7851787 | None:intergenic | 40.0% |
| CTCTTCAAAATTGAGGGAGA+AGG | + | chr8_4:7851766-7851785 | Msa1311170:CDS | 40.0% | |
| TGTTGTCTTCTTCTGTTCAG+AGG | - | chr8_4:7852065-7852084 | None:intergenic | 40.0% | |
| TGAATCCTTCTTCCCATCTT+TGG | + | chr8_4:7852291-7852310 | Msa1311170:CDS | 40.0% | |
| AAAGACGAGGAAATGAGAGA+TGG | - | chr8_4:7852405-7852424 | None:intergenic | 40.0% | |
| ATTGGCAGCGACATTAAACA+TGG | + | chr8_4:7852522-7852541 | Msa1311170:CDS | 40.0% | |
| TTAAAATACTTGCGCCTTGG+CGG | + | chr8_4:7852586-7852605 | Msa1311170:CDS | 40.0% | |
| GGATGTGAAAAAACTCCCAA+AGG | + | chr8_4:7852618-7852637 | Msa1311170:CDS | 40.0% | |
| ! | GATTTTGCACCCAATCCTTT+GGG | - | chr8_4:7852636-7852655 | None:intergenic | 40.0% |
| ! | AGATTTTGCACCCAATCCTT+TGG | - | chr8_4:7852637-7852656 | None:intergenic | 40.0% |
| ATCTAGATGCATTGCCAGAT+TGG | + | chr8_4:7852785-7852804 | Msa1311170:CDS | 40.0% | |
| AAGAGGTTGCAAATCCAATC+TGG | - | chr8_4:7852802-7852821 | None:intergenic | 40.0% | |
| GGGGCAATCAATGATTTCTA+GGG | - | chr8_4:7852908-7852927 | None:intergenic | 40.0% | |
| AGACACAATCTAGTGCAACA+TGG | + | chr8_4:7852947-7852966 | Msa1311170:CDS | 40.0% | |
| TGTGCAGTATCTCCCATCAA+TGG | + | chr8_4:7852186-7852205 | Msa1311170:CDS | 45.0% | |
| ACTGGAGACGTTCCATTGAT+GGG | - | chr8_4:7852201-7852220 | None:intergenic | 45.0% | |
| AACTGGAGACGTTCCATTGA+TGG | - | chr8_4:7852202-7852221 | None:intergenic | 45.0% | |
| ATCCTTCTTCCCATCTTTGG+AGG | + | chr8_4:7852294-7852313 | Msa1311170:CDS | 45.0% | |
| TTCCTCCAAAGATGGGAAGA+AGG | - | chr8_4:7852299-7852318 | None:intergenic | 45.0% | |
| TCTCCAATGTGGAAAGCTGA+AGG | + | chr8_4:7852327-7852346 | Msa1311170:CDS | 45.0% | |
| CTCCAATGTGGAAAGCTGAA+GGG | + | chr8_4:7852328-7852347 | Msa1311170:CDS | 45.0% | |
| ATCCCTTCAGCTTTCCACAT+TGG | - | chr8_4:7852333-7852352 | None:intergenic | 45.0% | |
| AATGTGGAAAGCTGAAGGGA+TGG | + | chr8_4:7852332-7852351 | Msa1311170:CDS | 45.0% | |
| ! | ATTCTCTAGTGTGGAGGCAT+TGG | + | chr8_4:7852504-7852523 | Msa1311170:CDS | 45.0% |
| TCCAGGAGAGGAAGATTGTT+GGG | - | chr8_4:7852739-7852758 | None:intergenic | 45.0% | |
| TTCCAGGAGAGGAAGATTGT+TGG | - | chr8_4:7852740-7852759 | None:intergenic | 45.0% | |
| CAAATCTTCGCAGCACATGA+TGG | - | chr8_4:7852842-7852861 | None:intergenic | 45.0% | |
| CATCATGTGCTGCGAAGATT+TGG | + | chr8_4:7852840-7852859 | Msa1311170:CDS | 45.0% | |
| CTAGGGTCTGTAATTTGGCA+AGG | - | chr8_4:7852891-7852910 | None:intergenic | 45.0% | |
| GGGGGCAATCAATGATTTCT+AGG | - | chr8_4:7852909-7852928 | None:intergenic | 45.0% | |
| TGTGCAGTATCTCCCATCAA+TGG | + | chr8_4:7852186-7852205 | Msa1311170:CDS | 45.0% | |
| ACTGGAGACGTTCCATTGAT+GGG | - | chr8_4:7852201-7852220 | None:intergenic | 45.0% | |
| AACTGGAGACGTTCCATTGA+TGG | - | chr8_4:7852202-7852221 | None:intergenic | 45.0% | |
| ATCCTTCTTCCCATCTTTGG+AGG | + | chr8_4:7852294-7852313 | Msa1311170:CDS | 45.0% | |
| TTCCTCCAAAGATGGGAAGA+AGG | - | chr8_4:7852299-7852318 | None:intergenic | 45.0% | |
| TCTCCAATGTGGAAAGCTGA+AGG | + | chr8_4:7852327-7852346 | Msa1311170:CDS | 45.0% | |
| CTCCAATGTGGAAAGCTGAA+GGG | + | chr8_4:7852328-7852347 | Msa1311170:CDS | 45.0% | |
| ATCCCTTCAGCTTTCCACAT+TGG | - | chr8_4:7852333-7852352 | None:intergenic | 45.0% | |
| AATGTGGAAAGCTGAAGGGA+TGG | + | chr8_4:7852332-7852351 | Msa1311170:CDS | 45.0% | |
| ! | ATTCTCTAGTGTGGAGGCAT+TGG | + | chr8_4:7852504-7852523 | Msa1311170:CDS | 45.0% |
| TCCAGGAGAGGAAGATTGTT+GGG | - | chr8_4:7852739-7852758 | None:intergenic | 45.0% | |
| TTCCAGGAGAGGAAGATTGT+TGG | - | chr8_4:7852740-7852759 | None:intergenic | 45.0% | |
| CAAATCTTCGCAGCACATGA+TGG | - | chr8_4:7852842-7852861 | None:intergenic | 45.0% | |
| CATCATGTGCTGCGAAGATT+TGG | + | chr8_4:7852840-7852859 | Msa1311170:CDS | 45.0% | |
| CTAGGGTCTGTAATTTGGCA+AGG | - | chr8_4:7852891-7852910 | None:intergenic | 45.0% | |
| GGGGGCAATCAATGATTTCT+AGG | - | chr8_4:7852909-7852928 | None:intergenic | 45.0% | |
| TGGAGTCATTGGATGCAAGC+AGG | + | chr8_4:7851717-7851736 | Msa1311170:CDS | 50.0% | |
| GGAGTCATTGGATGCAAGCA+GGG | + | chr8_4:7851718-7851737 | Msa1311170:CDS | 50.0% | |
| GCAGCGACATTAAACATGGC+AGG | + | chr8_4:7852526-7852545 | Msa1311170:CDS | 50.0% | |
| CCAGGAGAGGAAGATTGTTG+GGG | - | chr8_4:7852738-7852757 | None:intergenic | 50.0% | |
| ! | CGCAGCACATGATGGTGATT+TGG | - | chr8_4:7852834-7852853 | None:intergenic | 50.0% |
| GTCTGTAATTTGGCAAGGCG+AGG | - | chr8_4:7852886-7852905 | None:intergenic | 50.0% | |
| TGGAGTCATTGGATGCAAGC+AGG | + | chr8_4:7851717-7851736 | Msa1311170:CDS | 50.0% | |
| GGAGTCATTGGATGCAAGCA+GGG | + | chr8_4:7851718-7851737 | Msa1311170:CDS | 50.0% | |
| GCAGCGACATTAAACATGGC+AGG | + | chr8_4:7852526-7852545 | Msa1311170:CDS | 50.0% | |
| CCAGGAGAGGAAGATTGTTG+GGG | - | chr8_4:7852738-7852757 | None:intergenic | 50.0% | |
| ! | CGCAGCACATGATGGTGATT+TGG | - | chr8_4:7852834-7852853 | None:intergenic | 50.0% |
| GTCTGTAATTTGGCAAGGCG+AGG | - | chr8_4:7852886-7852905 | None:intergenic | 50.0% | |
| CATTGGATGCAAGCAGGGTG+CGG | + | chr8_4:7851723-7851742 | Msa1311170:CDS | 55.0% | |
| GTGGAAAGCTGAAGGGATGG+AGG | + | chr8_4:7852335-7852354 | Msa1311170:CDS | 55.0% | |
| AGCTGAAGGGATGGAGGATG+AGG | + | chr8_4:7852341-7852360 | Msa1311170:CDS | 55.0% | |
| GCTGAAGGGATGGAGGATGA+GGG | + | chr8_4:7852342-7852361 | Msa1311170:CDS | 55.0% | |
| ! | TACTTGCGCCTTGGCGGATA+TGG | + | chr8_4:7852592-7852611 | Msa1311170:CDS | 55.0% |
| CATCCAGACCATATCCGCCA+AGG | - | chr8_4:7852603-7852622 | None:intergenic | 55.0% | |
| CCCCAACAATCTTCCTCTCC+TGG | + | chr8_4:7852735-7852754 | Msa1311170:CDS | 55.0% | |
| CATTGGATGCAAGCAGGGTG+CGG | + | chr8_4:7851723-7851742 | Msa1311170:CDS | 55.0% | |
| GTGGAAAGCTGAAGGGATGG+AGG | + | chr8_4:7852335-7852354 | Msa1311170:CDS | 55.0% | |
| AGCTGAAGGGATGGAGGATG+AGG | + | chr8_4:7852341-7852360 | Msa1311170:CDS | 55.0% | |
| GCTGAAGGGATGGAGGATGA+GGG | + | chr8_4:7852342-7852361 | Msa1311170:CDS | 55.0% | |
| ! | TACTTGCGCCTTGGCGGATA+TGG | + | chr8_4:7852592-7852611 | Msa1311170:CDS | 55.0% |
| CATCCAGACCATATCCGCCA+AGG | - | chr8_4:7852603-7852622 | None:intergenic | 55.0% | |
| CCCCAACAATCTTCCTCTCC+TGG | + | chr8_4:7852735-7852754 | Msa1311170:CDS | 55.0% | |
| ! | GATTTGGCTTCGCTGCCCGA+AGG | + | chr8_4:7852856-7852875 | Msa1311170:CDS | 60.0% |
| ! | GCAAGGCGAGGCATTCCTTC+GGG | - | chr8_4:7852874-7852893 | None:intergenic | 60.0% |
| ! | GGCAAGGCGAGGCATTCCTT+CGG | - | chr8_4:7852875-7852894 | None:intergenic | 60.0% |
| ! | GATTTGGCTTCGCTGCCCGA+AGG | + | chr8_4:7852856-7852875 | Msa1311170:CDS | 60.0% |
| ! | GCAAGGCGAGGCATTCCTTC+GGG | - | chr8_4:7852874-7852893 | None:intergenic | 60.0% |
| ! | GGCAAGGCGAGGCATTCCTT+CGG | - | chr8_4:7852875-7852894 | None:intergenic | 60.0% |
| ! | GCGCCTTGGCGGATATGGTC+TGG | + | chr8_4:7852597-7852616 | Msa1311170:CDS | 65.0% |
| ! | GCGCCTTGGCGGATATGGTC+TGG | + | chr8_4:7852597-7852616 | Msa1311170:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 7851491 | 7853008 | 7851491 | ID=Msa1311170;Name=Msa1311170 |
| chr8_4 | mRNA | 7851491 | 7853008 | 7851491 | ID=Msa1311170-mRNA-1;Parent=Msa1311170;Name=Msa1311170-mRNA-1;_AED=0.38;_eAED=0.38;_QI=0|-1|0|1|-1|1|1|0|505 |
| chr8_4 | exon | 7851491 | 7853008 | 7851491 | ID=Msa1311170-mRNA-1:exon:2894;Parent=Msa1311170-mRNA-1 |
| chr8_4 | CDS | 7851491 | 7853008 | 7851491 | ID=Msa1311170-mRNA-1:cds;Parent=Msa1311170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
