AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1007930

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1007930 MtrunA17_Chr7g0218261 83.333 354 33 4 1 329 1 353 0.0 583
Msa1007930 MtrunA17_Chr7g0218261 67.397 365 57 6 456 761 7 368 4.61e-157 460
Msa1007930 MtrunA17_Chr7g0218211 80.274 365 11 4 456 761 7 369 0.0 563
Msa1007930 MtrunA17_Chr7g0218211 70.056 354 81 3 1 329 1 354 3.50e-173 501
Msa1007930 MtrunA17_Chr7g0218131 70.822 353 78 3 2 329 3 355 2.34e-179 517
Msa1007930 MtrunA17_Chr7g0218131 65.753 365 64 5 456 761 8 370 2.14e-154 453
Msa1007930 MtrunA17_Chr7g0218301 68.365 373 83 5 2 345 3 369 1.52e-170 495
Msa1007930 MtrunA17_Chr7g0218301 61.141 368 81 5 456 761 8 375 6.38e-143 424
Msa1007930 MtrunA17_Chr7g0218271 69.101 356 83 3 2 330 3 358 1.62e-170 495
Msa1007930 MtrunA17_Chr7g0218271 60.326 368 84 5 456 761 8 375 2.86e-142 422
Msa1007930 MtrunA17_Chr7g0218181 69.501 341 77 4 2 319 3 339 2.32e-160 469
Msa1007930 MtrunA17_Chr7g0218181 60.929 366 77 5 456 761 8 367 3.25e-141 419
Msa1007930 MtrunA17_Chr2g0307521 61.261 333 106 3 20 330 15 346 1.17e-138 413
Msa1007930 MtrunA17_Chr2g0307521 57.670 352 87 4 469 761 15 363 1.13e-125 379
Msa1007930 MtrunA17_Chr1g0200491 59.312 349 116 4 7 330 8 355 8.64e-138 411
Msa1007930 MtrunA17_Chr1g0200491 50.407 369 120 6 454 761 6 372 1.17e-110 341
Msa1007930 MtrunA17_Chr1g0163611 46.893 354 159 6 4 331 3 353 2.91e-103 322
Msa1007930 MtrunA17_Chr1g0163611 40.379 369 155 9 455 761 5 370 1.76e-77 254
Msa1007930 MtrunA17_Chr1g0163601 46.328 354 161 6 4 331 3 353 1.25e-101 317
Msa1007930 MtrunA17_Chr1g0163601 40.108 369 156 8 455 761 5 370 1.37e-76 251
Msa1007930 MtrunA17_Chr3g0085201 47.945 365 153 8 12 349 1 355 6.53e-97 305
Msa1007930 MtrunA17_Chr3g0085201 43.094 362 140 9 461 761 1 357 4.37e-78 255
Msa1007930 MtrunA17_Chr3g0085211 47.091 361 159 8 14 349 15 368 4.80e-96 303
Msa1007930 MtrunA17_Chr3g0085211 43.548 372 141 9 454 761 4 370 1.63e-79 259
Msa1007930 MtrunA17_Chr1g0163621 48.368 337 146 5 21 331 33 367 1.09e-95 302
Msa1007930 MtrunA17_Chr1g0163621 40.960 354 145 7 470 761 33 384 2.36e-70 235
Msa1007930 MtrunA17_Chr3g0128011 43.658 339 168 4 14 330 64 401 1.62e-85 277
Msa1007930 MtrunA17_Chr3g0128011 36.827 353 158 8 469 761 70 417 7.04e-56 197
Msa1007930 MtrunA17_Chr7g0276401 39.835 364 190 8 4 341 13 373 2.71e-75 248
Msa1007930 MtrunA17_Chr7g0276401 31.880 367 182 10 456 761 16 375 3.07e-44 163
Msa1007930 MtrunA17_Chr5g0448091 41.945 329 164 6 18 321 12 338 2.35e-74 245
Msa1007930 MtrunA17_Chr5g0448091 33.791 364 170 11 462 761 7 363 5.96e-49 176
Msa1007930 MtrunA17_Chr8g0367441 38.623 334 179 6 13 321 20 352 7.27e-70 234
Msa1007930 MtrunA17_Chr8g0367441 30.601 366 180 10 462 761 20 377 4.68e-41 154
Msa1007930 MtrunA17_Chr8g0367451 37.243 341 188 6 13 328 19 358 8.15e-66 223
Msa1007930 MtrunA17_Chr8g0367451 30.220 364 184 9 462 761 19 376 3.00e-38 146
Msa1007930 MtrunA17_Chr7g0276411 36.676 349 184 9 12 328 4 347 6.83e-65 220
Msa1007930 MtrunA17_Chr7g0276411 29.973 367 183 10 461 761 4 362 7.42e-38 145
Msa1007930 MtrunA17_Chr8g0367491 37.160 331 180 6 25 328 32 361 7.09e-63 215
Msa1007930 MtrunA17_Chr8g0367491 29.630 351 178 8 474 761 32 376 9.55e-35 136
Msa1007930 MtrunA17_Chr8g0367381 37.855 317 172 6 13 314 20 326 1.16e-61 210
Msa1007930 MtrunA17_Chr8g0367381 32.189 233 137 5 462 685 20 240 1.59e-30 122
Msa1007930 MtrunA17_Chr8g0345851 40.433 277 148 5 81 341 13 288 2.12e-59 202
Msa1007930 MtrunA17_Chr8g0345851 32.857 280 131 8 537 761 13 290 1.10e-30 122
Msa1007930 MtrunA17_Chr8g0367501 37.179 312 171 5 34 321 28 338 2.15e-59 207
Msa1007930 MtrunA17_Chr8g0367501 29.942 344 170 11 483 761 28 365 2.54e-33 133
Msa1007930 MtrunA17_Chr2g0314271 33.134 335 191 7 25 333 14 341 1.27e-47 172
Msa1007930 MtrunA17_Chr2g0314271 30.218 321 161 10 481 742 20 336 9.78e-30 121
Msa1007930 MtrunA17_Chr3g0130061 33.141 347 197 9 25 342 17 357 1.51e-45 167
Msa1007930 MtrunA17_Chr3g0130061 29.664 327 167 9 474 741 17 339 4.60e-24 104
Msa1007930 MtrunA17_Chr3g0130011 32.861 353 200 9 8 331 2 346 5.93e-45 165
Msa1007930 MtrunA17_Chr3g0130011 29.799 349 177 10 474 761 17 358 1.40e-26 112
Msa1007930 MtrunA17_Chr3g0121301 32.915 319 174 13 38 327 38 345 2.37e-40 152
Msa1007930 MtrunA17_Chr3g0121301 23.659 317 178 8 487 746 38 347 2.87e-13 72.0
Msa1007930 MtrunA17_Chr4g0022021 33.226 310 169 12 40 321 44 343 4.68e-40 151
Msa1007930 MtrunA17_Chr4g0022021 26.627 338 168 16 489 760 44 367 6.66e-16 80.1
Msa1007930 MtrunA17_Chr6g0482291 42.771 166 86 2 164 328 1 158 1.93e-38 140
Msa1007930 MtrunA17_Chr6g0482291 32.402 179 81 4 620 761 1 176 8.77e-22 93.2
Msa1007930 MtrunA17_Chr4g0021981 33.654 312 165 14 40 321 44 343 2.45e-37 144
Msa1007930 MtrunA17_Chr4g0021981 26.543 324 161 14 489 747 44 355 2.79e-13 72.4
Msa1007930 MtrunA17_Chr1g0188371 28.739 341 198 11 19 321 2 335 1.67e-36 141
Msa1007930 MtrunA17_Chr1g0188371 23.143 350 189 10 468 744 2 344 1.36e-13 73.2
Msa1007930 MtrunA17_Chr7g0223241 29.052 327 199 10 37 339 29 346 2.44e-35 137
Msa1007930 MtrunA17_Chr7g0223241 24.779 339 168 15 486 759 29 345 1.04e-12 70.5
Msa1007930 MtrunA17_Chr1g0188391 28.852 305 193 7 40 321 33 336 1.14e-33 133
Msa1007930 MtrunA17_Chr1g0188391 26.570 207 130 5 489 678 33 234 1.70e-11 66.6
Msa1007930 MtrunA17_Chr7g0223231 28.852 305 189 8 37 321 29 325 5.05e-32 127
Msa1007930 MtrunA17_Chr7g0223231 28.095 210 117 9 486 677 29 222 1.89e-11 66.2
Msa1007930 MtrunA17_Chr8g0367401 52.041 98 47 0 153 250 14 111 7.19e-31 118
Msa1007930 MtrunA17_Chr8g0367401 36.719 128 70 2 609 726 14 140 1.06e-19 86.3
Msa1007930 MtrunA17_Chr6g0476581 67.045 88 23 2 456 541 8 91 9.56e-31 116
Msa1007930 MtrunA17_Chr6g0476581 60.000 90 21 3 2 78 3 90 1.85e-22 93.2
Msa1007930 MtrunA17_Chr7g0219161 27.820 266 174 5 70 321 71 332 1.56e-30 124
Msa1007930 MtrunA17_Chr5g0432251 26.752 314 200 9 33 321 26 334 2.14e-30 123
Msa1007930 MtrunA17_Chr4g0046531 29.003 331 197 11 37 338 30 351 2.27e-30 127
Msa1007930 MtrunA17_Chr4g0046531 28.701 331 204 9 37 341 392 716 3.50e-30 127
Msa1007930 MtrunA17_Chr1g0170941 69.737 76 23 0 172 247 1 76 2.39e-30 114
Msa1007930 MtrunA17_Chr1g0170941 68.966 58 18 0 628 685 1 58 5.99e-22 90.5
Msa1007930 MtrunA17_Chr5g0432301 36.207 174 106 3 153 321 162 335 1.86e-28 117
Msa1007930 MtrunA17_Chr7g0219141 26.316 304 198 8 40 321 33 332 5.68e-28 116
Msa1007930 MtrunA17_Chr4g0046361 28.076 317 194 8 33 321 26 336 1.29e-27 115
Msa1007930 MtrunA17_Chr4g0040621 35.567 194 115 3 149 338 168 355 1.38e-27 115
Msa1007930 MtrunA17_Chr4g0014561 29.889 271 158 8 39 281 32 298 2.05e-27 114
Msa1007930 MtrunA17_Chr4g0014561 28.241 216 119 8 488 678 32 236 3.24e-11 65.9
Msa1007930 MtrunA17_Chr5g0432241 34.483 174 109 3 153 321 162 335 3.11e-27 114
Msa1007930 MtrunA17_Chr5g0432261 37.063 143 87 1 182 321 160 302 6.23e-27 112
Msa1007930 MtrunA17_Chr4g0014681 29.520 271 159 8 39 281 32 298 1.55e-26 112
Msa1007930 MtrunA17_Chr4g0014681 28.241 216 119 8 488 678 32 236 3.21e-11 65.9
Msa1007930 MtrunA17_Chr5g0432211 31.429 210 128 4 128 321 111 320 5.37e-26 110
Msa1007930 MtrunA17_Chr4g0014641 28.044 271 163 8 39 281 32 298 6.34e-25 107
Msa1007930 MtrunA17_Chr4g0046341 28.302 318 195 7 33 321 26 339 7.11e-24 104
Msa1007930 MtrunA17_Chr1g0170931 46.957 115 53 3 474 581 6 119 1.55e-22 94.0
Msa1007930 MtrunA17_Chr1g0170931 41.667 120 54 3 25 130 6 123 5.95e-19 83.6
Msa1007930 MtrunA17_Chr4g0014661 27.626 257 153 6 39 271 32 279 4.11e-22 99.0
Msa1007930 MtrunA17_Chr4g0014591 27.344 256 153 6 39 270 32 278 9.76e-21 94.7
Msa1007930 MtrunA17_Chr8g0367421 39.796 98 42 1 153 250 14 94 7.86e-18 80.5
Msa1007930 MtrunA17_Chr8g0367421 41.667 72 42 0 609 680 14 85 1.18e-12 65.5
Msa1007930 MtrunA17_Chr4g0014601 26.471 238 141 7 39 252 32 259 8.38e-16 78.2
Msa1007930 MtrunA17_Chr8g0367461 39.175 97 55 2 236 328 1 97 3.13e-15 72.4
Msa1007930 MtrunA17_Chr8g0367471 44.595 74 41 0 164 237 1 74 1.06e-14 70.5
Msa1007930 MtrunA17_Chr8g0367471 51.724 58 28 0 628 685 9 66 1.07e-13 67.4
Msa1007930 MtrunA17_Chr7g0219171 32.407 108 69 2 217 321 117 223 1.89e-14 73.9
Msa1007930 MtrunA17_Chr5g0393501 26.923 156 94 1 321 456 86 241 4.79e-12 66.6
Msa1007930 MtrunA17_Chr8g0367481 31.852 135 77 4 14 134 21 154 3.07e-11 62.4
Msa1007930 MtrunA17_Chr1g0170951 40.625 64 38 0 258 321 17 80 3.68e-11 60.5
Msa1007930 MtrunA17_Chr8g0367391 43.243 74 41 1 249 321 36 109 5.89e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1007930 AT5G54160.1 42.577 357 169 7 14 341 10 359 2.42e-83 270
Msa1007930 AT5G54160.1 37.677 353 153 8 469 761 16 361 3.46e-58 202
Msa1007930 AT1G51990.2 38.123 341 173 8 20 329 12 345 5.16e-69 231
Msa1007930 AT1G51990.2 30.878 353 180 8 469 760 12 361 1.76e-40 153
Msa1007930 AT1G51990.1 37.830 341 174 8 20 329 12 345 5.33e-68 229
Msa1007930 AT1G51990.1 30.878 353 180 8 469 760 12 361 9.02e-40 151
Msa1007930 AT1G77520.1 39.450 327 169 7 24 321 30 356 1.06e-67 228
Msa1007930 AT1G77520.1 30.894 369 185 9 460 761 16 381 8.98e-43 160
Msa1007930 AT1G33030.1 37.539 317 175 5 27 321 10 325 3.43e-60 207
Msa1007930 AT1G33030.1 32.092 349 166 11 476 761 10 350 9.58e-37 142
Msa1007930 AT1G77530.1 39.450 327 169 6 24 321 30 356 2.57e-59 206
Msa1007930 AT1G77530.1 32.113 355 172 9 473 761 30 381 3.16e-34 135
Msa1007930 AT1G63140.4 36.111 360 187 9 4 321 18 376 8.79e-58 202
Msa1007930 AT1G63140.4 30.748 361 177 11 469 761 46 401 1.93e-34 136
Msa1007930 AT1G63140.2 36.236 356 184 9 8 321 2 356 1.43e-57 201
Msa1007930 AT1G63140.2 30.748 361 177 11 469 761 26 381 1.07e-34 137
Msa1007930 AT1G21100.1 37.971 345 176 10 16 327 15 354 4.42e-55 194
Msa1007930 AT1G21100.1 30.986 355 172 11 465 751 15 364 5.78e-31 125
Msa1007930 AT1G21120.1 37.681 345 177 10 16 327 15 354 1.25e-54 193
Msa1007930 AT1G21120.1 30.986 355 172 11 465 751 15 364 5.28e-30 122
Msa1007930 AT1G21110.1 37.391 345 178 10 16 327 15 354 3.31e-54 191
Msa1007930 AT1G21110.1 31.831 355 169 11 465 751 15 364 5.02e-32 129
Msa1007930 AT1G21130.1 37.752 347 178 10 14 327 13 354 3.77e-54 191
Msa1007930 AT1G21130.1 31.373 357 172 11 463 751 13 364 7.68e-32 128
Msa1007930 AT1G21120.2 37.681 345 177 10 16 327 63 402 4.27e-54 192
Msa1007930 AT1G21120.2 30.986 355 172 11 465 751 63 412 1.27e-29 122
Msa1007930 AT1G76790.1 35.380 342 177 9 17 321 6 340 5.08e-50 180
Msa1007930 AT1G76790.1 31.608 367 173 14 466 761 6 365 2.80e-27 114
Msa1007930 AT5G53810.1 35.873 315 172 8 37 321 39 353 1.05e-49 179
Msa1007930 AT5G53810.1 29.070 344 172 11 486 761 39 378 3.20e-27 114
Msa1007930 AT1G62900.1 47.273 165 85 2 159 321 16 180 1.28e-43 157
Msa1007930 AT1G62900.1 33.503 197 86 4 609 761 10 205 1.15e-24 102
Msa1007930 AT3G53140.1 30.245 367 211 9 12 342 1 358 2.28e-43 161
Msa1007930 AT3G53140.1 27.143 350 184 8 461 745 1 344 2.65e-26 111
Msa1007930 AT1G33030.3 36.842 247 134 4 27 252 10 255 1.07e-42 156
Msa1007930 AT1G33030.3 35.526 228 124 7 476 685 10 232 2.83e-31 124
Msa1007930 AT1G33030.2 36.735 245 133 4 27 250 10 253 1.07e-41 153
Msa1007930 AT1G33030.2 35.526 228 124 7 476 685 10 232 2.30e-31 124
Msa1007930 AT5G37170.1 31.765 340 178 9 4 321 2 309 1.50e-41 155
Msa1007930 AT5G37170.1 26.861 309 145 9 511 761 49 334 2.57e-20 93.6
Msa1007930 AT5G37170.2 45.349 172 91 3 153 321 38 209 3.43e-41 151
Msa1007930 AT5G37170.2 30.303 198 92 4 609 761 38 234 2.73e-21 94.0
Msa1007930 AT1G63140.1 34.843 287 146 7 4 250 18 303 5.34e-39 147
Msa1007930 AT1G63140.1 34.322 236 127 7 469 680 46 277 5.47e-25 106
Msa1007930 AT5G37170.3 45.963 161 84 3 164 321 1 161 8.93e-39 142
Msa1007930 AT5G37170.3 29.412 187 86 4 620 761 1 186 3.38e-18 83.6
Msa1007930 AT1G21130.2 38.433 268 129 8 14 250 13 275 4.40e-34 132
Msa1007930 AT1G21130.2 35.628 247 130 9 463 685 13 254 5.07e-24 103
Msa1007930 AT1G77530.2 38.136 236 119 5 24 232 30 265 7.43e-33 128
Msa1007930 AT1G77530.2 37.295 244 125 7 473 694 30 267 8.63e-27 110
Msa1007930 AT1G63140.3 33.088 272 141 7 4 235 18 288 8.80e-30 120
Msa1007930 AT1G63140.3 34.322 236 127 7 469 680 46 277 3.99e-25 106
Msa1007930 AT4G35150.1 35.838 173 101 5 157 319 125 297 1.13e-29 120
Msa1007930 AT4G35160.1 29.206 315 186 8 38 319 44 354 7.60e-29 119

Find 172 sgRNAs with CRISPR-Local

Find 813 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAAATGGTGATTCTTATT+TGG 0.110334 7_1:-7761754 Msa1007930:CDS
TTGTGTCACCCTGCTTTCTT+AGG 0.145605 7_1:-7771147 Msa1007930:CDS
TGCCTTTATTGATGGATATT+TGG 0.160057 7_1:+7768342 None:intergenic
TGCCTTTATTGATGGGTATT+TGG 0.171496 7_1:+7760686 None:intergenic
TGATGGATATTTGGATATAA+TGG 0.199838 7_1:+7768351 None:intergenic
TTCTTTGATCCTAGATCTTC+TGG 0.207724 7_1:+7767907 None:intergenic
TGAAAATGACCGTGGCTATT+TGG 0.212694 7_1:-7771187 Msa1007930:CDS
GAAAATGACCGTGGCTATTT+GGG 0.233700 7_1:-7771186 Msa1007930:CDS
GGTAGCATAGTGAGAGTTTA+TGG 0.246664 7_1:-7761810 Msa1007930:CDS
TTTGTTGGTTCTAGATCTTC+TGG 0.251949 7_1:+7759671 None:intergenic
AATTTAGGGATTGAACATTT+TGG 0.256339 7_1:-7768186 Msa1007930:intron
GAAGTTCCTATCGTTGGATA+TGG 0.258835 7_1:-7763845 Msa1007930:CDS
TGTGAAGGAATATGAGAGTT+TGG 0.271292 7_1:-7759582 Msa1007930:CDS
TATCAAACGATTACCTTGAT+AGG 0.274418 7_1:+7768279 None:intergenic
AATCTTGATGTTTCACTCTA+AGG 0.274923 7_1:+7763679 None:intergenic
GAAAATGGTGATTCTTATTT+GGG 0.280555 7_1:-7761753 Msa1007930:CDS
GGTAAGATGGTGAGAATTTA+TGG 0.297794 7_1:-7771243 Msa1007930:CDS
TGTCTTGCTTTCTCTATCAT+TGG 0.299632 7_1:-7759524 Msa1007930:CDS
TATGGTACTTGGTGCAAATT+TGG 0.299869 7_1:-7771472 Msa1007930:CDS
ATTCTCTTTCTCATTGGTAT+AGG 0.302862 7_1:+7771548 None:intergenic
AAGTTGATTGCCTTTATTGA+TGG 0.303709 7_1:+7768334 None:intergenic
CATATCCTTTGTATATTTCA+AGG 0.318611 7_1:+7768428 None:intergenic
TGTAGCTTGTGTGCCATAAT+TGG 0.329579 7_1:-7768017 Msa1007930:intron
AACATACGATCGAGCCTATT+CGG 0.337571 7_1:+7761888 None:intergenic
CCAAAGGAATATGAGAGTTT+AGG 0.337934 7_1:-7767817 Msa1007930:intron
GTCTCACCCTGCTTTGTCAA+TGG 0.339346 7_1:-7761712 Msa1007930:CDS
CACCATCTTACCAGCATCAT+TGG 0.343103 7_1:+7771254 None:intergenic
TTCCATGAACTTTCTTGAAT+AGG 0.343440 7_1:+7768545 None:intergenic
CTCCAAATACCCATCAATAA+AGG 0.347086 7_1:-7760688 Msa1007930:CDS
AAATTAATTGCCTTTATTGA+TGG 0.347116 7_1:+7760678 None:intergenic
CAAATCCTTGGTATATTTCA+AGG 0.351720 7_1:+7760772 None:intergenic
CCTAAACTCTCATATTCCTT+TGG 0.353807 7_1:+7767817 None:intergenic
ATCCAAATATCCATCAATAA+AGG 0.367463 7_1:-7768344 Msa1007930:CDS
TAGGAACTACGTGATACTTT+TGG 0.367790 7_1:-7763708 Msa1007930:CDS
CGATTATTCTACGAATTTAG+TGG 0.373935 7_1:-7764001 Msa1007930:CDS
CACATGATTCTCTTTCTCAT+TGG 0.381581 7_1:+7771542 None:intergenic
TGTGTCACCCTGCTTTCTTA+GGG 0.392354 7_1:-7771146 Msa1007930:CDS
TGAAATATACAAAGGATATG+AGG 0.400826 7_1:-7768425 Msa1007930:CDS
GAATTTCAAGGATGCAGTTA+TGG 0.405462 7_1:-7768581 Msa1007930:CDS
GTAATATAGGTTGAATTTCA+AGG 0.410479 7_1:-7768593 Msa1007930:intron
ACAATAATGACCTTACCATT+TGG 0.414692 7_1:+7767943 None:intergenic
TATGGTACTTGGTGCCAATA+TGG 0.415869 7_1:-7762045 Msa1007930:CDS
TCCGAACATCACATTTGGTA+TGG 0.417548 7_1:+7763594 None:intergenic
TTCTAGATCTTCTGGTTGCA+AGG 0.420081 7_1:+7759679 None:intergenic
GTTGATGCAGGAGGTGGAAA+TGG 0.422151 7_1:-7768388 Msa1007930:CDS
CTCTTCTGTCTGTTTCTACT+CGG 0.428133 7_1:-7761845 Msa1007930:CDS
ATCTACTTCCACCAAGGTAC+TGG 0.428620 7_1:+7763960 None:intergenic
AATTAATTGCCTTTATTGAT+GGG 0.430852 7_1:+7760679 None:intergenic
TACAAAGCTTTGCCACCAAA+TGG 0.432948 7_1:-7759722 Msa1007930:intron
ACCTTTGAAGTTCCTATCGT+TGG 0.439777 7_1:-7763851 Msa1007930:CDS
AGCCATCGAGATACATTTGT+TGG 0.440383 7_1:+7759656 None:intergenic
GTGAAGGAATATGAGAGTTT+GGG 0.444889 7_1:-7759581 Msa1007930:CDS
CTCTTCTGTCTATTTCTACT+CGG 0.445033 7_1:-7771278 Msa1007930:CDS
AACACTCTGATTTGCCGAAT+AGG 0.445684 7_1:-7761902 Msa1007930:CDS
AACCGCAGGAAACACCATAT+TGG 0.452926 7_1:+7762031 None:intergenic
CACAAAGCTTTGCCTCCAAA+TGG 0.455140 7_1:-7767958 Msa1007930:CDS
GAGAGTTTGGGAAAACGATC+TGG 0.456073 7_1:-7759569 Msa1007930:CDS
TATCATTGTCATCTATTTGT+GGG 0.458069 7_1:+7762078 None:intergenic
TATCATTGTCATCTATTTGT+GGG 0.458069 7_1:+7771505 None:intergenic
TGAAATATACCAAGGATTTG+AGG 0.458232 7_1:-7760769 Msa1007930:CDS
GAAATATACCAAGGATTTGA+GGG 0.458648 7_1:-7760768 Msa1007930:CDS
AGGAGATGCTATAATGCTTA+AGG 0.460184 7_1:-7768136 Msa1007930:intron
ATATCAACTTTGGTTGATGT+AGG 0.461312 7_1:-7760744 Msa1007930:CDS
TTGATATTCCCTCAAATCCT+TGG 0.462356 7_1:+7760760 None:intergenic
TTGTGCTGCCAATGGTATTG+AGG 0.463000 7_1:-7763554 Msa1007930:CDS
ATTTATGGTATCACACCATC+TGG 0.463582 7_1:-7771228 Msa1007930:CDS
GCCGCACTCATGGAATGATA+TGG 0.467521 7_1:+7763890 None:intergenic
CACTATGCTACCATCATCAT+TGG 0.468574 7_1:+7761821 None:intergenic
TCATTGATTTGTTAAATATG+TGG 0.472047 7_1:+7768482 None:intergenic
CCCATACCAAATGTGATGTT+CGG 0.472080 7_1:-7763595 Msa1007930:CDS
CCAAATGTGATGTTCGGAAA+AGG 0.475440 7_1:-7763589 Msa1007930:CDS
ATGAGAATGAGCTTTCCATT+TGG 0.475637 7_1:+7759707 None:intergenic
TATCAACTTTGGTTGATGTA+GGG 0.479740 7_1:-7760743 Msa1007930:CDS
ACCCTGCTTTCTTAGGGGTG+TGG 0.483296 7_1:-7771140 Msa1007930:intron
TTTATTTGATATCATTGCTA+AGG 0.484926 7_1:-7761985 Msa1007930:CDS
TTTATTTGATATCATTGCTA+AGG 0.484926 7_1:-7771412 Msa1007930:CDS
ATCAACTTTGGTTGATGTAG+GGG 0.485080 7_1:-7760742 Msa1007930:CDS
GTATCATTGTCATCTATTTG+TGG 0.485841 7_1:+7762077 None:intergenic
GTATCATTGTCATCTATTTG+TGG 0.485841 7_1:+7771504 None:intergenic
ACACTCTCTGCTATGGTACT+TGG 0.489061 7_1:-7762056 Msa1007930:CDS
AGAATGAGCTTTCCATTTGG+TGG 0.491504 7_1:+7759710 None:intergenic
GTAGCATAGTGAGAGTTTAT+GGG 0.492258 7_1:-7761809 Msa1007930:CDS
CCGAACATCACATTTGGTAT+GGG 0.497922 7_1:+7763595 None:intergenic
AACATCATGTTTATCACAGC+TGG 0.498404 7_1:-7767856 Msa1007930:CDS
ATTTGAGGGAATATCAACTT+TGG 0.500220 7_1:-7760754 Msa1007930:CDS
AAGGAAAGTTCACATAATGA+TGG 0.500299 7_1:-7761966 Msa1007930:CDS
ACATGATGATGCCGCACTCA+TGG 0.500506 7_1:+7763880 None:intergenic
TTGTCATCTATTTGTGGGGT+GGG 0.500756 7_1:+7771510 None:intergenic
TGTGCTGCCAATGGTATTGA+GGG 0.501205 7_1:-7763553 Msa1007930:CDS
ATTATTGCTTTCCAGTACCT+TGG 0.503165 7_1:-7763971 Msa1007930:CDS
TTCTTATCACCAGAAGATCT+AGG 0.505074 7_1:-7767916 Msa1007930:CDS
ATCTAAGATGGTTTCAATTG+TGG 0.508062 7_1:-7767881 Msa1007930:CDS
GTGCATGTTCAATCACTTGT+GGG 0.508307 7_1:+7768305 None:intergenic
ACACTCTCAGCTATGGTACT+TGG 0.515175 7_1:-7771483 Msa1007930:CDS
ATCAAAGAATGCATCTAAGA+TGG 0.518349 7_1:-7767893 Msa1007930:CDS
TTTCTCTATCATTGGAGTGA+TGG 0.521287 7_1:-7759516 Msa1007930:CDS
GTTTATCACAGCTGGTGGTA+AGG 0.522095 7_1:-7767848 Msa1007930:CDS
TACCACACCCCTAAGAAAGC+AGG 0.522755 7_1:+7771138 None:intergenic
ACACTAGTTGATGCAGGAGG+TGG 0.525144 7_1:-7768394 Msa1007930:CDS
ATTGTCATCTATTTGTGGGG+TGG 0.525366 7_1:+7771509 None:intergenic
TAACTTTGAAGCAATTTCAA+AGG 0.526373 7_1:+7761932 None:intergenic
TAACTTTGAAGCAATTTCAA+AGG 0.526373 7_1:+7771365 None:intergenic
TCTAGATCTTCTGGTTGCAA+GGG 0.529836 7_1:+7759680 None:intergenic
GGCCGTTGTTGACAGATGGT+TGG 0.533142 7_1:-7764033 Msa1007930:intron
ATAATGACCTTACCATTTGG+AGG 0.535537 7_1:+7767946 None:intergenic
TACCACACCATTGACAAAGC+AGG 0.536967 7_1:+7761705 None:intergenic
GTTTATGGGATCACACCATC+TGG 0.539788 7_1:-7761795 Msa1007930:CDS
GAAGCAATTATTGATCCAGA+AGG 0.539977 7_1:-7760915 Msa1007930:CDS
GGTGCATGTTCAATCACTTG+TGG 0.542683 7_1:+7768304 None:intergenic
ATCAAACGATTACCTTGATA+GGG 0.543293 7_1:+7768280 None:intergenic
AAGCAATTATTGATCCAGAA+GGG 0.545644 7_1:-7760914 Msa1007930:CDS
ATTGCAGCGTTAAGAACTGC+AGG 0.546169 7_1:+7771444 None:intergenic
TTAAATATTTCATTTATCTG+TGG 0.548437 7_1:+7760837 None:intergenic
ATTGCTTTCCAGTACCTTGG+TGG 0.549152 7_1:-7763968 Msa1007930:CDS
AGCTTTGCCTCCAAATGGTA+AGG 0.551516 7_1:-7767953 Msa1007930:CDS
GGCAAATCAGAGTGTTGAGT+TGG 0.551660 7_1:+7761909 None:intergenic
GAAATATACAAAGGATATGA+GGG 0.554252 7_1:-7768424 Msa1007930:CDS
GAACATGCACCACCCTATCA+AGG 0.555845 7_1:-7768292 Msa1007930:intron
AACATGATGTTTGTCACAGC+TGG 0.557381 7_1:-7759620 Msa1007930:CDS
CAATGATACACTCTCTGCTA+TGG 0.557805 7_1:-7762063 Msa1007930:CDS
CTAACAAAATATTTGCCAGA+TGG 0.558170 7_1:+7771213 None:intergenic
GAAAATACACCACCTTGTCC+AGG 0.565413 7_1:-7760636 Msa1007930:intron
GTGTCACCCTGCTTTCTTAG+GGG 0.567433 7_1:-7771145 Msa1007930:CDS
TTTCAAGTGCAAGTGCGTCA+TGG 0.567746 7_1:-7763515 Msa1007930:CDS
CAATGATACACTCTCAGCTA+TGG 0.570430 7_1:-7771490 Msa1007930:CDS
GTTTGTCACAGCTGGTGGAA+TGG 0.572866 7_1:-7759612 Msa1007930:CDS
AAATGGTAAGGTCATTATTG+TGG 0.574360 7_1:-7767941 Msa1007930:CDS
GACCAATGATGCTGGTAAGA+TGG 0.575549 7_1:-7771256 Msa1007930:CDS
TCTACTCGGACCAATGATGC+TGG 0.579916 7_1:-7771264 Msa1007930:CDS
ATATCAACACTAGTTGATGC+AGG 0.580056 7_1:-7768400 Msa1007930:CDS
ATCATTGCTAAGGAAAGTAA+TGG 0.580805 7_1:-7771402 Msa1007930:CDS
TTGACAAAATATTTACCAGA+TGG 0.581272 7_1:+7761780 None:intergenic
GTCTCCGCCCTCAATACCAT+TGG 0.581950 7_1:+7763546 None:intergenic
AGCATTATAGCATCTCCTTG+TGG 0.587439 7_1:+7768141 None:intergenic
ATTGCAGCGTTAAGAACCGC+AGG 0.587759 7_1:+7762017 None:intergenic
TCTACTCGGACCAATGATGA+TGG 0.591740 7_1:-7761831 Msa1007930:CDS
ACCACACCATTGACAAAGCA+GGG 0.592656 7_1:+7761706 None:intergenic
TTCTTGAATAGGTCAATCTG+TGG 0.593090 7_1:+7768556 None:intergenic
ATCATTGTCATCTATTTGTG+GGG 0.602565 7_1:+7762079 None:intergenic
ATCATTGTCATCTATTTGTG+GGG 0.602565 7_1:+7771506 None:intergenic
ACCCTGCTTTGTCAATGGTG+TGG 0.605546 7_1:-7761707 Msa1007930:intron
AACCAACAAATGTATCTCGA+TGG 0.605786 7_1:-7759658 Msa1007930:CDS
ATGTGATGTTCGGAAAAGGT+TGG 0.606400 7_1:-7763585 Msa1007930:CDS
ATGATGTTTGTCACAGCTGG+TGG 0.606417 7_1:-7759617 Msa1007930:CDS
GCTTGTGTGCCATAATTGGC+CGG 0.609839 7_1:-7768013 Msa1007930:CDS
TCCAACGATAGGAACTTCAA+AGG 0.611311 7_1:+7763850 None:intergenic
AATATTTAACAAATCAATGA+CGG 0.613308 7_1:-7760823 Msa1007930:CDS
TCAACTTTGGTTGATGTAGG+GGG 0.614546 7_1:-7760741 Msa1007930:CDS
GTTAGTAATGAAAATGACCG+TGG 0.620038 7_1:-7771195 Msa1007930:CDS
AGAATCCTTGAAATATACAA+AGG 0.621043 7_1:-7768433 Msa1007930:CDS
ACCACACCCCTAAGAAAGCA+GGG 0.625227 7_1:+7771139 None:intergenic
AGCAATTATTGATCCAGAAG+GGG 0.627732 7_1:-7760913 Msa1007930:CDS
GTCGATCCATATCCAACGAT+AGG 0.629633 7_1:+7763839 None:intergenic
ACCATATCATTCCATGAGTG+CGG 0.630455 7_1:-7763891 Msa1007930:CDS
ATCATGTTTATCACAGCTGG+TGG 0.631832 7_1:-7767853 Msa1007930:CDS
TGGTAAGGAAAGAACTCCAA+AGG 0.640143 7_1:-7767833 Msa1007930:CDS
AGAAATAGATTACCTGGACA+AGG 0.643454 7_1:+7760624 None:intergenic
AGAATCCTTGAAATATACCA+AGG 0.645385 7_1:-7760777 Msa1007930:CDS
GCACTCATGGAATGATATGG+TGG 0.648560 7_1:+7763893 None:intergenic
AAAATGACCGTGGCTATTTG+GGG 0.651797 7_1:-7771185 Msa1007930:CDS
AAACGATTACCTTGATAGGG+TGG 0.654233 7_1:+7768283 None:intergenic
ATGTTTGAATGTGTTCCACA+AGG 0.665860 7_1:-7768156 Msa1007930:CDS
TCATTGACCCCAAATAGCCA+CGG 0.680122 7_1:+7771178 None:intergenic
CATGTTCAATCACTTGTGGG+AGG 0.680883 7_1:+7768308 None:intergenic
TTTGAAATCTACTTCCACCA+AGG 0.681040 7_1:+7763954 None:intergenic
TGCCAATATGGTGTTTCCTG+CGG 0.681065 7_1:-7762033 Msa1007930:CDS
TGGAATGGAAAGAAGTGTGA+AGG 0.698054 7_1:-7759597 Msa1007930:CDS
TGGATCGACGAAATCACCGA+AGG 0.700849 7_1:-7763825 Msa1007930:intron
AATAGATTACCTGGACAAGG+TGG 0.704084 7_1:+7760627 None:intergenic
TCAACACTAGTTGATGCAGG+AGG 0.712058 7_1:-7768397 Msa1007930:CDS
CAATGAGAAAGAGAATCATG+TGG 0.722288 7_1:-7771541 Msa1007930:CDS
GCTGCCAATGGTATTGAGGG+CGG 0.739556 7_1:-7763550 Msa1007930:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+AGG - chr7_1:7761745-7761764 Msa1007930:CDS 0.0%
!! ATATATATATATATATATAT+GGG + chr7_1:7761745-7761764 None:intergenic 0.0%
!! TATATATATATATATATATA+TGG + chr7_1:7761746-7761765 None:intergenic 0.0%
!! ATAAATTAAAAATTAAAAAT+AGG + chr7_1:7765953-7765972 None:intergenic 0.0%
!! ATAAATTAAAAATTAAAAAT+AGG - chr7_1:7765953-7765972 Msa1007930:intron 0.0%
!!! TATAATAACCATTTTAATAA+GGG + chr7_1:7759951-7759970 None:intergenic 10.0%
!!! ATATAATAACCATTTTAATA+AGG + chr7_1:7759952-7759971 None:intergenic 10.0%
!! TATTTCAAAATATATATACA+TGG - chr7_1:7760031-7760050 Msa1007930:intron 10.0%
!! TAAATTTAATATTGATGTAT+TGG - chr7_1:7762371-7762390 Msa1007930:intron 10.0%
!!! AAAAATTGTTTTTGTAATAT+AGG - chr7_1:7762448-7762467 Msa1007930:intron 10.0%
!!! AAATTTTCAAAACAAAATTT+AGG - chr7_1:7762853-7762872 Msa1007930:intron 10.0%
!!! AATTTTCAAAACAAAATTTA+GGG - chr7_1:7762854-7762873 Msa1007930:intron 10.0%
!!! CTTTGTTTTTTTTTTTTTTT+AGG + chr7_1:7763921-7763940 None:intergenic 10.0%
!!! TTTTGAATTTATTTAGTTTT+TGG + chr7_1:7765597-7765616 None:intergenic 10.0%
!!! TTTTGAATTTATTTAGTTTT+TGG - chr7_1:7765597-7765616 Msa1007930:intron 10.0%
!! AGTATTATATATTTAAGTAA+CGG - chr7_1:7768745-7768764 Msa1007930:intron 10.0%
!! TAAAAAAATTGAATATTTGT+AGG - chr7_1:7769518-7769537 Msa1007930:intron 10.0%
!! ATATTTACTTATTTAAATAC+TGG - chr7_1:7769563-7769582 Msa1007930:intron 10.0%
!!! AAAATATTTTTATAATGTGT+AGG - chr7_1:7770104-7770123 Msa1007930:intron 10.0%
!! AATAATATTGTAACTTAAAT+TGG + chr7_1:7770484-7770503 None:intergenic 10.0%
!!! TAAAACACTTTTAAAAATAT+AGG - chr7_1:7770728-7770747 Msa1007930:intron 10.0%
!!! ATTCATTTTAAAAAATTAGT+GGG + chr7_1:7770793-7770812 None:intergenic 10.0%
!!! TATTCATTTTAAAAAATTAG+TGG + chr7_1:7770794-7770813 None:intergenic 10.0%
!!! AAGAACTATTTTATAAATAA+GGG + chr7_1:7771215-7771234 None:intergenic 10.0%
!!! TAAGAACTATTTTATAAATA+AGG + chr7_1:7771216-7771235 None:intergenic 10.0%
!!! TTTTATGTTGGAAAATAAAA+AGG + chr7_1:7760590-7760609 None:intergenic 15.0%
!!! TTATTTTCCAACATAAAAAA+AGG - chr7_1:7760592-7760611 Msa1007930:intron 15.0%
!!! ATTAACTTTTGTATTTCATT+AGG + chr7_1:7760896-7760915 None:intergenic 15.0%
!!! ACAAAATTAATTTTCACAAA+AGG - chr7_1:7760923-7760942 Msa1007930:CDS 15.0%
!!! TACTAAAAAGTGTATATTTT+TGG - chr7_1:7761002-7761021 Msa1007930:intron 15.0%
!!! TAATATGGACTTTTTAAAAA+TGG - chr7_1:7761451-7761470 Msa1007930:intron 15.0%
!!! ACTTTTTAAAAATGGTATAA+GGG - chr7_1:7761459-7761478 Msa1007930:intron 15.0%
!!! CTTTTTTTTTTTTTTTAAGC+TGG - chr7_1:7761634-7761653 Msa1007930:intron 15.0%
!! TATAAAATTAGGATTGAATT+AGG + chr7_1:7762094-7762113 None:intergenic 15.0%
!! GTAATGATAAATACATATAT+TGG + chr7_1:7762401-7762420 None:intergenic 15.0%
!!! TTAAATATGTGGTTTATTTT+TGG + chr7_1:7762564-7762583 None:intergenic 15.0%
!! TGTAATATATCATATAAATC+TGG - chr7_1:7763376-7763395 Msa1007930:intron 15.0%
!! TGAAATTATCTTCAATTAAT+TGG - chr7_1:7763611-7763630 Msa1007930:intron 15.0%
!! CTTAATTTATTATTGGATAT+GGG + chr7_1:7766013-7766032 None:intergenic 15.0%
!! ACTTAATTTATTATTGGATA+TGG + chr7_1:7766012-7766031 None:intergenic 15.0%
!! GGTTAATAATAAGATATATA+AGG + chr7_1:7765974-7765993 None:intergenic 15.0%
!!! ATGATTTATGAAATTTTGAA+TGG - chr7_1:7764652-7764671 Msa1007930:intron 15.0%
!! TAAATAAATTCAAAAATCCA+TGG - chr7_1:7764747-7764766 Msa1007930:intron 15.0%
!! AAATAAATTCAAAAATCCAT+GGG - chr7_1:7764748-7764767 Msa1007930:intron 15.0%
!! TTAAATATAGAGATATACTA+GGG + chr7_1:7764924-7764943 None:intergenic 15.0%
!! ATCATTTCTCTATATAATAT+AGG - chr7_1:7765057-7765076 Msa1007930:intron 15.0%
!! AAATAAATTCAAAAATCCAT+GGG + chr7_1:7764748-7764767 None:intergenic 15.0%
!! TAAATAAATTCAAAAATCCA+TGG + chr7_1:7764747-7764766 None:intergenic 15.0%
!!! ATGATTTATGAAATTTTGAA+TGG + chr7_1:7764652-7764671 None:intergenic 15.0%
!! GGTTAATAATAAGATATATA+AGG - chr7_1:7765974-7765993 Msa1007930:intron 15.0%
!! ACTTAATTTATTATTGGATA+TGG - chr7_1:7766012-7766031 Msa1007930:intron 15.0%
!! CTTAATTTATTATTGGATAT+GGG - chr7_1:7766013-7766032 Msa1007930:intron 15.0%
!!! GAATGAAAATTTAACTTTAA+TGG + chr7_1:7766761-7766780 None:intergenic 15.0%
!! TTCTATTTAAATAAGATGAA+TGG - chr7_1:7766833-7766852 Msa1007930:intron 15.0%
!! AAATATTCAACAATGAAAAA+TGG + chr7_1:7766921-7766940 None:intergenic 15.0%
!!! AACTTTAATTTTATGTTTAG+TGG - chr7_1:7767778-7767797 Msa1007930:intron 15.0%
!! TTAATAGAAAAACTTAGAAA+TGG - chr7_1:7768376-7768395 Msa1007930:CDS 15.0%
!! AAAATAATGTAATCATACAT+TGG + chr7_1:7768666-7768685 None:intergenic 15.0%
!! GTATTATATATTTAAGTAAC+GGG - chr7_1:7768746-7768765 Msa1007930:intron 15.0%
!! ATCAAACTTATAAAATTTCA+TGG + chr7_1:7769852-7769871 None:intergenic 15.0%
!! TGTTGTGTATAATAAATTAT+GGG + chr7_1:7769984-7770003 None:intergenic 15.0%
!! ATGTTGTGTATAATAAATTA+TGG + chr7_1:7769985-7770004 None:intergenic 15.0%
!! TTAAATATTTCATTTATCTG+TGG + chr7_1:7770220-7770239 None:intergenic 15.0%
!! AATATTTAACAAATCAATGA+CGG - chr7_1:7770231-7770250 Msa1007930:intron 15.0%
!! AATAAAAAACTAAAACTGAT+GGG + chr7_1:7770633-7770652 None:intergenic 15.0%
!! AAATAAAAAACTAAAACTGA+TGG + chr7_1:7770634-7770653 None:intergenic 15.0%
!!! TTTAAAATGAATATGTTAAG+TGG - chr7_1:7770801-7770820 Msa1007930:intron 15.0%
!!! TTTTATCATTGATTATCTAT+AGG - chr7_1:7770952-7770971 Msa1007930:intron 15.0%
!!! TTTATCATTGATTATCTATA+GGG - chr7_1:7770953-7770972 Msa1007930:intron 15.0%
!!! GATAAATGAAAAATTTTAGA+GGG + chr7_1:7771056-7771075 None:intergenic 15.0%
!!! TGATAAATGAAAAATTTTAG+AGG + chr7_1:7771057-7771076 None:intergenic 15.0%
!! AATCAAATGTTGATATATTT+AGG - chr7_1:7771169-7771188 Msa1007930:CDS 15.0%
!! ATCAAATGTTGATATATTTA+GGG - chr7_1:7771170-7771189 Msa1007930:CDS 15.0%
!! TTTATTTGATATCATTGCTA+AGG - chr7_1:7759642-7759661 Msa1007930:CDS 20.0%
!!! TCTTCACTTATTCTTTTTTT+TGG - chr7_1:7760094-7760113 Msa1007930:intron 20.0%
!! AAAATACACATGTTTAAACT+TGG - chr7_1:7760265-7760284 Msa1007930:intron 20.0%
!!! TTTTTTATAGTTTGTACTCT+TGG + chr7_1:7760555-7760574 None:intergenic 20.0%
!! TTAACCATAGTTGTAAAAAT+CGG - chr7_1:7760622-7760641 Msa1007930:intron 20.0%
!!! CACTTTTTAGTAAATATTGT+GGG + chr7_1:7760994-7761013 None:intergenic 20.0%
!!! ACACTTTTTAGTAAATATTG+TGG + chr7_1:7760995-7761014 None:intergenic 20.0%
!!! GACTTTTTAAAAATGGTATA+AGG - chr7_1:7761458-7761477 Msa1007930:intron 20.0%
!!! ACAATAGATCTTTCTATTTT+AGG + chr7_1:7761564-7761583 None:intergenic 20.0%
!! AAAATAGAAAGATCTATTGT+CGG - chr7_1:7761564-7761583 Msa1007930:intron 20.0%
!! AAAAAAAAAAAGTTGACCAA+TGG + chr7_1:7761626-7761645 None:intergenic 20.0%
!!! ACACCTTTTAAAAAATAAGT+GGG + chr7_1:7761817-7761836 None:intergenic 20.0%
!! AATTTCACATCAATGTTAAA+GGG + chr7_1:7762003-7762022 None:intergenic 20.0%
!! AAATTTCACATCAATGTTAA+AGG + chr7_1:7762004-7762023 None:intergenic 20.0%
!! AATTCACTCAATTCAAAATT+AGG + chr7_1:7762205-7762224 None:intergenic 20.0%
!!! AATTTTGAATTGAGTGAATT+TGG - chr7_1:7762205-7762224 Msa1007930:intron 20.0%
!! TTAAAATTGGTCATTTATGT+TGG + chr7_1:7762337-7762356 None:intergenic 20.0%
!!! TCATTGATTTGTTAAATATG+TGG + chr7_1:7762575-7762594 None:intergenic 20.0%
!! TTAAATAATTCTTGAGAAAG+TGG + chr7_1:7762826-7762845 None:intergenic 20.0%
!!! TCTAGAAAATTTAAAGTACA+TGG + chr7_1:7763402-7763421 None:intergenic 20.0%
!! ACAAAAATCATAGAGAAAAT+TGG + chr7_1:7763555-7763574 None:intergenic 20.0%
!! CATTAAACGATTAAGATTTA+TGG - chr7_1:7763946-7763965 Msa1007930:CDS 20.0%
!! ATATACACATAATTGTCTAT+TGG + chr7_1:7764134-7764153 None:intergenic 20.0%
!! ACAATTATGTGTATATCTTA+GGG - chr7_1:7764138-7764157 Msa1007930:intron 20.0%
!!! TTATGTTTTAAAGAAGAAGA+AGG + chr7_1:7765806-7765825 None:intergenic 20.0%
!! TAATCCATAGAAAAATAAGA+GGG + chr7_1:7765710-7765729 None:intergenic 20.0%
!! ATAATCCATAGAAAAATAAG+AGG + chr7_1:7765709-7765728 None:intergenic 20.0%
!!! AATTTTGAATGGATTATGTA+TGG - chr7_1:7764663-7764682 Msa1007930:intron 20.0%
!! CTTAAATATAGAGATATACT+AGG + chr7_1:7764925-7764944 None:intergenic 20.0%
!!! AACTCTAGCTTTTATAATAA+AGG + chr7_1:7765099-7765118 None:intergenic 20.0%
!! AAACATAGAATTTGAATCAA+CGG + chr7_1:7765222-7765241 None:intergenic 20.0%
!!! AATTTTGAATGGATTATGTA+TGG + chr7_1:7764663-7764682 None:intergenic 20.0%
!! ATAATCCATAGAAAAATAAG+AGG - chr7_1:7765709-7765728 Msa1007930:intron 20.0%
!! TAATCCATAGAAAAATAAGA+GGG - chr7_1:7765710-7765729 Msa1007930:intron 20.0%
!!! TTATGTTTTAAAGAAGAAGA+AGG - chr7_1:7765806-7765825 Msa1007930:intron 20.0%
!! AAGAAAAATAATGGTTTCAA+TGG - chr7_1:7765848-7765867 Msa1007930:intron 20.0%
!! AGAAAAATAATGGTTTCAAT+GGG - chr7_1:7765849-7765868 Msa1007930:intron 20.0%
!! TAGCAATGAATTTAAATCAA+CGG + chr7_1:7765187-7765206 None:intergenic 20.0%
!! TAACTTTAATGGTAAAATGT+GGG + chr7_1:7766750-7766769 None:intergenic 20.0%
!! TTAACTTTAATGGTAAAATG+TGG + chr7_1:7766751-7766770 None:intergenic 20.0%
!! AAGTTTATGGAATAAGTTTA+CGG + chr7_1:7766862-7766881 None:intergenic 20.0%
!! AAAAAACAATAAACAACCTT+CGG + chr7_1:7767248-7767267 None:intergenic 20.0%
!! ACATGAATTATATTGTCATA+AGG + chr7_1:7767418-7767437 None:intergenic 20.0%
!! ACATAAAATTAAAGTTGCTA+CGG + chr7_1:7767774-7767793 None:intergenic 20.0%
!! GAATTACTATAGTATTCTAA+TGG + chr7_1:7768014-7768033 None:intergenic 20.0%
!!! TCTAAGAAAGTTTTTTGTAA+AGG + chr7_1:7768076-7768095 None:intergenic 20.0%
!!! TTGATTTGATTTGTTTTGTT+TGG + chr7_1:7768838-7768857 None:intergenic 20.0%
!! AAAACAAATCAAATCAAATC+TGG - chr7_1:7768841-7768860 Msa1007930:intron 20.0%
!! TTTATTTGATATCATTGCTA+AGG - chr7_1:7759642-7759661 Msa1007930:CDS 20.0%
!!! TATTTTGTCAAGTATGAAAA+TGG - chr7_1:7769286-7769305 Msa1007930:intron 20.0%
!! AAATCGTGAATATAAATTGT+AGG - chr7_1:7769603-7769622 Msa1007930:intron 20.0%
!!! TGATATCATTTTAGAAATCA+TGG - chr7_1:7769682-7769701 Msa1007930:intron 20.0%
!! CTTTAACAAAATCATTACAA+TGG - chr7_1:7769801-7769820 Msa1007930:intron 20.0%
!! CTACAATAACTAATATCATT+AGG + chr7_1:7769932-7769951 None:intergenic 20.0%
!! AATTAATTGCCTTTATTGAT+GGG + chr7_1:7770378-7770397 None:intergenic 20.0%
!! AAATTAATTGCCTTTATTGA+TGG + chr7_1:7770379-7770398 None:intergenic 20.0%
!! AAAATTTCCCAATTTCATTT+AGG - chr7_1:7770509-7770528 Msa1007930:intron 20.0%
!! AGCAAGTTATAACTAAATTA+TGG - chr7_1:7770680-7770699 Msa1007930:intron 20.0%
!!! ACTTTTAAAAATATAGGTGT+AGG - chr7_1:7770734-7770753 Msa1007930:intron 20.0%
!! ATATGGATGAATTAATTCTT+AGG - chr7_1:7770869-7770888 Msa1007930:intron 20.0%
!! ACAAATTCTCAGTTATTAAT+TGG + chr7_1:7770930-7770949 None:intergenic 20.0%
!! ATCAAATGTTGGTATATTTA+GGG + chr7_1:7770998-7771017 None:intergenic 20.0%
!! AATCAAATGTTGGTATATTT+AGG + chr7_1:7770999-7771018 None:intergenic 20.0%
!!! AAAACCTAAGAAATGTTTTA+GGG + chr7_1:7771029-7771048 None:intergenic 20.0%
!!! AAAAACCTAAGAAATGTTTT+AGG + chr7_1:7771030-7771049 None:intergenic 20.0%
!! TCAAATGTTGATATATTTAG+GGG - chr7_1:7771171-7771190 Msa1007930:CDS 20.0%
!!! ACTATTTTATAAATAAGGGT+TGG + chr7_1:7771211-7771230 None:intergenic 20.0%
! TATCATTGTCATCTATTTGT+GGG + chr7_1:7759552-7759571 None:intergenic 25.0%
!!! TAACTTTGAAGCAATTTCAA+AGG + chr7_1:7759692-7759711 None:intergenic 25.0%
!! GTGTTTTTCCCTTATTAAAA+TGG - chr7_1:7759940-7759959 Msa1007930:intron 25.0%
! AAAAGAATAAGTGAAGATTG+AGG + chr7_1:7760091-7760110 None:intergenic 25.0%
!!! TCACTTATTCTTTTTTTTGG+TGG - chr7_1:7760097-7760116 Msa1007930:intron 25.0%
! GACAATGTATTATATATGCA+AGG + chr7_1:7760145-7760164 None:intergenic 25.0%
!!! AGTACAATTCTCTGTTTTTT+CGG + chr7_1:7760408-7760427 None:intergenic 25.0%
! ACAAAACAAGTAACAAATGA+CGG - chr7_1:7760478-7760497 Msa1007930:intron 25.0%
!!! AGCAATACCTTTTTTTATGT+TGG + chr7_1:7760602-7760621 None:intergenic 25.0%
! TATAATTCGATTCTTTCATG+AGG + chr7_1:7760710-7760729 None:intergenic 25.0%
!!! AAATTACGCATTTTGAGTTT+TGG - chr7_1:7760946-7760965 Msa1007930:intron 25.0%
! TTATTGAATAGTTGCAAACA+AGG + chr7_1:7761247-7761266 None:intergenic 25.0%
!! TATATATATAGGAGTTTGCT+AGG - chr7_1:7761786-7761805 Msa1007930:CDS 25.0%
!!! ACACCCACTTATTTTTTAAA+AGG - chr7_1:7761811-7761830 Msa1007930:CDS 25.0%
!!! CACACCTTTTAAAAAATAAG+TGG + chr7_1:7761818-7761837 None:intergenic 25.0%
! AAGTAGTTAAATACACCTTA+AGG - chr7_1:7761859-7761878 Msa1007930:intron 25.0%
!!! AATGACCAATTTTAAAGTGT+AGG - chr7_1:7762342-7762361 Msa1007930:intron 25.0%
!!! TTTAGCCTACACTTTAAAAT+TGG + chr7_1:7762350-7762369 None:intergenic 25.0%
!! GTAATATAGGTTGAATTTCA+AGG - chr7_1:7762461-7762480 Msa1007930:intron 25.0%
! AGAATCCTTGAAATATACAA+AGG - chr7_1:7762621-7762640 Msa1007930:intron 25.0%
! CATATCCTTTGTATATTTCA+AGG + chr7_1:7762629-7762648 None:intergenic 25.0%
! TGAAATATACAAAGGATATG+AGG - chr7_1:7762629-7762648 Msa1007930:intron 25.0%
! GAAATATACAAAGGATATGA+GGG - chr7_1:7762630-7762649 Msa1007930:intron 25.0%
!! TGATGGATATTTGGATATAA+TGG + chr7_1:7762706-7762725 None:intergenic 25.0%
! ATCCAAATATCCATCAATAA+AGG - chr7_1:7762710-7762729 Msa1007930:intron 25.0%
!! AATTTAGGGATTGAACATTT+TGG - chr7_1:7762868-7762887 Msa1007930:intron 25.0%
!! TGATTCTAATTTTGTACACA+TGG - chr7_1:7763004-7763023 Msa1007930:intron 25.0%
!! ATTTCTAAGCATTTTTCATC+CGG + chr7_1:7763063-7763082 None:intergenic 25.0%
! GCTTTAATTGATCGTTAATT+GGG - chr7_1:7763481-7763500 Msa1007930:intron 25.0%
! AATGCATGTGTATAGTAAAA+AGG - chr7_1:7764002-7764021 Msa1007930:CDS 25.0%
!!! ACTTTTTTCTCTCTTTTGAT+TGG - chr7_1:7764087-7764106 Msa1007930:intron 25.0%
! GACAATTATGTGTATATCTT+AGG - chr7_1:7764137-7764156 Msa1007930:intron 25.0%
! CAATTATGTGTATATCTTAG+GGG - chr7_1:7764139-7764158 Msa1007930:intron 25.0%
! TTTGACTACCCATTATTATA+TGG - chr7_1:7764261-7764280 Msa1007930:intron 25.0%
! TATGACTTGAAAAGTTGAAT+CGG + chr7_1:7765917-7765936 None:intergenic 25.0%
!! AAAATAAAGGCATGGTTATT+GGG + chr7_1:7765881-7765900 None:intergenic 25.0%
!! AAAAATAAAGGCATGGTTAT+TGG + chr7_1:7765880-7765899 None:intergenic 25.0%
! ATTGAAGAAAAATAAAGGCA+TGG + chr7_1:7765873-7765892 None:intergenic 25.0%
! TGGGAATTGAAGAAAAATAA+AGG + chr7_1:7765839-7765858 None:intergenic 25.0%
! TGGGAATTGAAGAAAAATAA+TGG - chr7_1:7765839-7765858 Msa1007930:intron 25.0%
! TGGGAATTGAAGAAAAATAA+AGG - chr7_1:7765839-7765858 Msa1007930:intron 25.0%
! ATTGAAGAAAAATAAAGGCA+TGG - chr7_1:7765873-7765892 Msa1007930:intron 25.0%
!! AAAAATAAAGGCATGGTTAT+TGG - chr7_1:7765880-7765899 Msa1007930:intron 25.0%
!! AAAATAAAGGCATGGTTATT+GGG - chr7_1:7765881-7765900 Msa1007930:intron 25.0%
! TATGACTTGAAAAGTTGAAT+CGG - chr7_1:7765917-7765936 Msa1007930:intron 25.0%
! TTTGACTACCCATTATTATA+TGG + chr7_1:7764261-7764280 None:intergenic 25.0%
! TAAAAATGATGGTAGGATTA+GGG + chr7_1:7766201-7766220 None:intergenic 25.0%
! ATAAAAATGATGGTAGGATT+AGG + chr7_1:7766202-7766221 None:intergenic 25.0%
! GTTTCTGTAGATAAAAATGA+TGG + chr7_1:7766212-7766231 None:intergenic 25.0%
!! AAACATAGCTTTTGAATCAA+CGG + chr7_1:7766361-7766380 None:intergenic 25.0%
! GTTTCTGTAGATAAAAATGA+TGG + chr7_1:7766212-7766231 None:intergenic 25.0%
! TAACTTTAGTGGTAACATTT+GGG + chr7_1:7766629-7766648 None:intergenic 25.0%
! ATAACTTTAGTGGTAACATT+TGG + chr7_1:7766630-7766649 None:intergenic 25.0%
! AATGTTACCACTAAAGTTAT+AGG - chr7_1:7766630-7766649 Msa1007930:intron 25.0%
! ATATCTTCCTATAACTTTAG+TGG + chr7_1:7766640-7766659 None:intergenic 25.0%
! AACTTTAATGGTAAAATGTG+GGG + chr7_1:7766749-7766768 None:intergenic 25.0%
! AAATATTATCAGCTTTGCAT+AGG - chr7_1:7767673-7767692 Msa1007930:intron 25.0%
! TTTGTAAAGGAATTATAGCT+AGG + chr7_1:7768063-7768082 None:intergenic 25.0%
!! CTTTTATGACTGCAATAAAT+AGG - chr7_1:7768122-7768141 Msa1007930:intron 25.0%
!!! ATTTGCATCAATTGCTTTTA+TGG - chr7_1:7768311-7768330 Msa1007930:CDS 25.0%
! TTGCAATCACTTAAAAATGT+TGG - chr7_1:7768399-7768418 Msa1007930:CDS 25.0%
! TTGAAAATACTAATCGTTGA+TGG - chr7_1:7768498-7768517 Msa1007930:CDS 25.0%
! ATTCTCTTTATCATTGGTAT+AGG + chr7_1:7768936-7768955 None:intergenic 25.0%
! TATCATTGTCATCTATTTGT+GGG + chr7_1:7759552-7759571 None:intergenic 25.0%
!!! TAACTTTGAAGCAATTTCAA+AGG + chr7_1:7759692-7759711 None:intergenic 25.0%
! TTGACAAAATATTTACCAGA+TGG + chr7_1:7769277-7769296 None:intergenic 25.0%
! TGAAAATGGTGATTCTTATT+TGG - chr7_1:7769300-7769319 Msa1007930:intron 25.0%
!! GAAAATGGTGATTCTTATTT+GGG - chr7_1:7769301-7769320 Msa1007930:intron 25.0%
! TAATATTAGGTTTCTGCTAT+CGG + chr7_1:7769633-7769652 None:intergenic 25.0%
! CTTATAAAATTTCATGGAGT+AGG + chr7_1:7769846-7769865 None:intergenic 25.0%
!! TATTTTCAATTACTTGTGGA+AGG + chr7_1:7770405-7770424 None:intergenic 25.0%
! TAAATGAGAAATAGATTACC+TGG + chr7_1:7770439-7770458 None:intergenic 25.0%
! TTCAATGCCTAAATGAAATT+GGG + chr7_1:7770519-7770538 None:intergenic 25.0%
! ATTCAATGCCTAAATGAAAT+TGG + chr7_1:7770520-7770539 None:intergenic 25.0%
!!! AAACCTAAGAAATGTTTTAG+GGG + chr7_1:7771028-7771047 None:intergenic 25.0%
!! TAAAATATTCTTCAGGCTTT+TGG + chr7_1:7771139-7771158 None:intergenic 25.0%
!! AAAGCCTGAAGAATATTTTA+TGG - chr7_1:7771139-7771158 Msa1007930:intron 25.0%
!! AAGCCTGAAGAATATTTTAT+GGG - chr7_1:7771140-7771159 Msa1007930:intron 25.0%
! CAAATGTTGATATATTTAGG+GGG - chr7_1:7771172-7771191 Msa1007930:CDS 25.0%
! GAGCAATGAAAAATAATTCA+AGG + chr7_1:7771255-7771274 None:intergenic 25.0%
!!! GAATTATTTTTCATTGCTCT+AGG - chr7_1:7771256-7771275 Msa1007930:CDS 25.0%
ATTCTCTTTCTCATTGGTAT+AGG + chr7_1:7759509-7759528 None:intergenic 30.0%
ATCATTGTCATCTATTTGTG+GGG + chr7_1:7759551-7759570 None:intergenic 30.0%
GTATCATTGTCATCTATTTG+TGG + chr7_1:7759553-7759572 None:intergenic 30.0%
ATCATTGCTAAGGAAAGTAA+TGG - chr7_1:7759652-7759671 Msa1007930:CDS 30.0%
CTAACAAAATATTTGCCAGA+TGG + chr7_1:7759844-7759863 None:intergenic 30.0%
GTGTCAATTGCATTATTCTA+GGG - chr7_1:7760053-7760072 Msa1007930:intron 30.0%
!!! CTTATTCTTTTTTTTGGTGG+TGG - chr7_1:7760100-7760119 Msa1007930:intron 30.0%
TATTATATATGCAAGGTCTG+GGG + chr7_1:7760138-7760157 None:intergenic 30.0%
GTATTATATATGCAAGGTCT+GGG + chr7_1:7760139-7760158 None:intergenic 30.0%
TGTATTATATATGCAAGGTC+TGG + chr7_1:7760140-7760159 None:intergenic 30.0%
TAACAATGCATACGCATTAA+TGG - chr7_1:7760369-7760388 Msa1007930:intron 30.0%
! ACAAATGACGGAAGTAAAAA+AGG - chr7_1:7760490-7760509 Msa1007930:intron 30.0%
! ATTGTCTCATGATTTTGTGA+GGG + chr7_1:7760525-7760544 None:intergenic 30.0%
! AATTGTCTCATGATTTTGTG+AGG + chr7_1:7760526-7760545 None:intergenic 30.0%
AGATCAAACCATTGAGTTAT+TGG - chr7_1:7760679-7760698 Msa1007930:CDS 30.0%
ATTCAATAAATAGACTGAGC+CGG - chr7_1:7761275-7761294 Msa1007930:intron 30.0%
!!! GGATGTGGACTTTTTTTTTT+TGG - chr7_1:7761348-7761367 Msa1007930:intron 30.0%
!!! TGTGGACTTTTTTTTTTTGG+TGG - chr7_1:7761351-7761370 Msa1007930:intron 30.0%
GACAATGCATAAAATATGCA+AGG + chr7_1:7761399-7761418 None:intergenic 30.0%
TCCTTCAACAAAAAAAAACC+AGG - chr7_1:7761674-7761693 Msa1007930:intron 30.0%
!!! ACCTGGTTTTTTTTTGTTGA+AGG + chr7_1:7761678-7761697 None:intergenic 30.0%
ACAAAAAAAAACCAGGTCAT+TGG - chr7_1:7761681-7761700 Msa1007930:intron 30.0%
!!! TTTAAAAGGTGTGTTTTAGC+AGG - chr7_1:7761825-7761844 Msa1007930:CDS 30.0%
TTCCATGAACTTTCTTGAAT+AGG + chr7_1:7762512-7762531 None:intergenic 30.0%
! TGCCTTTATTGATGGATATT+TGG + chr7_1:7762715-7762734 None:intergenic 30.0%
! AAGTTGATTGCCTTTATTGA+TGG + chr7_1:7762723-7762742 None:intergenic 30.0%
ATCAAACGATTACCTTGATA+GGG + chr7_1:7762777-7762796 None:intergenic 30.0%
TATCAAACGATTACCTTGAT+AGG + chr7_1:7762778-7762797 None:intergenic 30.0%
ACAATAATGACCTTACCATT+TGG + chr7_1:7763114-7763133 None:intergenic 30.0%
AAATGGTAAGGTCATTATTG+TGG - chr7_1:7763113-7763132 Msa1007930:intron 30.0%
ATCAAAGAATGCATCTAAGA+TGG - chr7_1:7763161-7763180 Msa1007930:intron 30.0%
! ATCTAAGATGGTTTCAATTG+TGG - chr7_1:7763173-7763192 Msa1007930:intron 30.0%
CGCTTTAATTGATCGTTAAT+TGG - chr7_1:7763480-7763499 Msa1007930:intron 30.0%
TCAATTAATTGGAAGATCCA+AGG - chr7_1:7763622-7763641 Msa1007930:intron 30.0%
! TATTCATCATGTATTAGCCT+TGG + chr7_1:7763642-7763661 None:intergenic 30.0%
!!! AAACTTTTAGAGCACAATGT+TGG - chr7_1:7763671-7763690 Msa1007930:intron 30.0%
!!! AACTTTTAGAGCACAATGTT+GGG - chr7_1:7763672-7763691 Msa1007930:CDS 30.0%
TATGAAAACGCATAAAACAG+AGG + chr7_1:7763833-7763852 None:intergenic 30.0%
! GTATCCAAGGGTATAATTAA+CGG - chr7_1:7764235-7764254 Msa1007930:intron 30.0%
! TATCCAAGGGTATAATTAAC+GGG - chr7_1:7764236-7764255 Msa1007930:intron 30.0%
GTCAGTGTCCATATAATAAT+GGG + chr7_1:7766067-7766086 None:intergenic 30.0%
TGTCAGTGTCCATATAATAA+TGG + chr7_1:7766066-7766085 None:intergenic 30.0%
TTATTATATGGACACTGACA+CGG - chr7_1:7764273-7764292 Msa1007930:intron 30.0%
! AAATAAAGGCATGGTTATTG+GGG + chr7_1:7765882-7765901 None:intergenic 30.0%
!!! GTTTTAAAGAAGAAGAAGGA+TGG + chr7_1:7765810-7765829 None:intergenic 30.0%
TGGGTATCATATTTATCCAA+CGG - chr7_1:7764849-7764868 Msa1007930:intron 30.0%
GATTAGCATTAACTACGTAA+TGG + chr7_1:7765287-7765306 None:intergenic 30.0%
TAGAAAATGGTAATCGTTAG+GGG + chr7_1:7765379-7765398 None:intergenic 30.0%
GTAGAAAATGGTAATCGTTA+GGG + chr7_1:7765380-7765399 None:intergenic 30.0%
!! GAGATGATAATGGTAGAAAA+TGG + chr7_1:7765392-7765411 None:intergenic 30.0%
TGGGTATCATATTTATCCAA+CGG + chr7_1:7764849-7764868 None:intergenic 30.0%
!!! GTTTTAAAGAAGAAGAAGGA+TGG - chr7_1:7765810-7765829 Msa1007930:intron 30.0%
! AAATAAAGGCATGGTTATTG+GGG - chr7_1:7765882-7765901 Msa1007930:intron 30.0%
TTATTATATGGACACTGACA+CGG + chr7_1:7764273-7764292 None:intergenic 30.0%
TGTCAGTGTCCATATAATAA+TGG - chr7_1:7766066-7766085 Msa1007930:intron 30.0%
GTCAGTGTCCATATAATAAT+GGG - chr7_1:7766067-7766086 Msa1007930:intron 30.0%
! TATCCAAGGGTATAATTAAC+GGG + chr7_1:7764236-7764255 None:intergenic 30.0%
! GTATCCAAGGGTATAATTAA+CGG + chr7_1:7764235-7764254 None:intergenic 30.0%
AAAAATGATGGTAGGATTAG+GGG + chr7_1:7766200-7766219 None:intergenic 30.0%
CTGTAGATAAAAATGATGGT+AGG + chr7_1:7766208-7766227 None:intergenic 30.0%
! AGCATTAACTACGTTTTTGA+TGG + chr7_1:7766426-7766445 None:intergenic 30.0%
!! GAAATGATAATGGTAGAAGA+TGG + chr7_1:7766535-7766554 None:intergenic 30.0%
! ATAATGGTGGGAAATGATAA+TGG + chr7_1:7766545-7766564 None:intergenic 30.0%
CTGTAGATAAAAATGATGGT+AGG + chr7_1:7766208-7766227 None:intergenic 30.0%
AACTTTAGTGGTAACATTTG+GGG + chr7_1:7766628-7766647 None:intergenic 30.0%
ATCTTCCTATCACTCTATTT+CGG + chr7_1:7766704-7766723 None:intergenic 30.0%
! ATAGGAAGATATGCGTTTTA+AGG - chr7_1:7766714-7766733 Msa1007930:intron 30.0%
ACTTTAATGGTAAAATGTGG+GGG + chr7_1:7766748-7766767 None:intergenic 30.0%
AGTTAGGCAGAAAAAGTTTA+TGG + chr7_1:7766875-7766894 None:intergenic 30.0%
TGTTCAACAAATCAGTTTGT+TGG - chr7_1:7767000-7767019 Msa1007930:intron 30.0%
CGATTATTCTACGAATTTAG+TGG - chr7_1:7767053-7767072 Msa1007930:intron 30.0%
AATCTTGATGTTTCACTCTA+AGG + chr7_1:7767378-7767397 None:intergenic 30.0%
AGCTTTGCATAGGTAAAAAA+AGG - chr7_1:7767683-7767702 Msa1007930:intron 30.0%
! GGCAAAAAAAGTATGTAATG+CGG - chr7_1:7767704-7767723 Msa1007930:intron 30.0%
AAAAAGAGAGCAAACTAAAC+TGG + chr7_1:7767747-7767766 None:intergenic 30.0%
TAGTAATTCACCTTAAAAGC+AGG - chr7_1:7768025-7768044 Msa1007930:intron 30.0%
TATGACTGCAATAAATAGGT+AGG - chr7_1:7768126-7768145 Msa1007930:intron 30.0%
TGCTTTCAATACGTAGTAAT+TGG + chr7_1:7767892-7767911 None:intergenic 30.0%
! CTTTTATGGCTGCAATAAAT+AGG - chr7_1:7768325-7768344 Msa1007930:CDS 30.0%
TCTTTCGTAATGTATCTTGA+TGG - chr7_1:7768568-7768587 Msa1007930:CDS 30.0%
CATACAGACAAAAAATCAAC+TGG + chr7_1:7768626-7768645 None:intergenic 30.0%
TGATTCGATTAACTTCTATG+TGG - chr7_1:7768689-7768708 Msa1007930:intron 30.0%
! TTGTGTGTCACTATTTCATT+TGG + chr7_1:7768812-7768831 None:intergenic 30.0%
CACATGATTCTCTTTATCAT+TGG + chr7_1:7768942-7768961 None:intergenic 30.0%
ATCATTGTCATCTATTTGTG+GGG + chr7_1:7759551-7759570 None:intergenic 30.0%
GTATCATTGTCATCTATTTG+TGG + chr7_1:7759553-7759572 None:intergenic 30.0%
AAGGAAAGTTCACATAATGA+TGG - chr7_1:7769088-7769107 Msa1007930:intron 30.0%
ATACATGACTACATCAATCA+AGG + chr7_1:7769394-7769413 None:intergenic 30.0%
AATATTAGGTTTCTGCTATC+GGG + chr7_1:7769632-7769651 None:intergenic 30.0%
AGCAGAAACCTAATATTAGA+TGG - chr7_1:7769635-7769654 Msa1007930:intron 30.0%
!!! AAGTTTTGAATTCAACAGAC+AGG - chr7_1:7769883-7769902 Msa1007930:intron 30.0%
GAATTCAAGGCTAAAAAACA+AGG + chr7_1:7770018-7770037 None:intergenic 30.0%
TATATCAACAAGCTATTAGC+AGG + chr7_1:7770078-7770097 None:intergenic 30.0%
AAGCAATTATTGATCCAGAA+GGG - chr7_1:7770140-7770159 Msa1007930:intron 30.0%
!!! TTCCATGAACTTTTTTGAAC+AGG + chr7_1:7770168-7770187 None:intergenic 30.0%
AGAATCCTTGAAATATACCA+AGG - chr7_1:7770277-7770296 Msa1007930:intron 30.0%
CAAATCCTTGGTATATTTCA+AGG + chr7_1:7770285-7770304 None:intergenic 30.0%
TGAAATATACCAAGGATTTG+AGG - chr7_1:7770285-7770304 Msa1007930:intron 30.0%
GAAATATACCAAGGATTTGA+GGG - chr7_1:7770286-7770305 Msa1007930:intron 30.0%
ATTTGAGGGAATATCAACTT+TGG - chr7_1:7770300-7770319 Msa1007930:intron 30.0%
! ATATCAACTTTGGTTGATGT+AGG - chr7_1:7770310-7770329 Msa1007930:intron 30.0%
! TATCAACTTTGGTTGATGTA+GGG - chr7_1:7770311-7770330 Msa1007930:intron 30.0%
! GGTGTATTTTCAATTACTTG+TGG + chr7_1:7770409-7770428 None:intergenic 30.0%
!! CATTTAGGCATTGAATATGT+TGG - chr7_1:7770524-7770543 Msa1007930:intron 30.0%
ATCATTATGACATCTCCTTT+GGG + chr7_1:7770572-7770591 None:intergenic 30.0%
AATCATTATGACATCTCCTT+TGG + chr7_1:7770573-7770592 None:intergenic 30.0%
AGGAGATGTCATAATGATTA+AGG - chr7_1:7770574-7770593 Msa1007930:intron 30.0%
! AGATATGTTGCTGACTAATA+TGG - chr7_1:7770852-7770871 Msa1007930:intron 30.0%
!! AACCTAAGAAATGTTTTAGG+GGG + chr7_1:7771027-7771046 None:intergenic 30.0%
! AGCCTGAAGAATATTTTATG+GGG - chr7_1:7771141-7771160 Msa1007930:CDS 30.0%
ATCCCCATAAAATATTCTTC+AGG + chr7_1:7771146-7771165 None:intergenic 30.0%
CACATGATTCTCTTTCTCAT+TGG + chr7_1:7759515-7759534 None:intergenic 35.0%
CAATGAGAAAGAGAATCATG+TGG - chr7_1:7759513-7759532 Msa1007930:CDS 35.0%
!! TATGGTACTTGGTGCAAATT+TGG - chr7_1:7759582-7759601 Msa1007930:CDS 35.0%
!! CTCTTCTGTCTATTTCTACT+CGG - chr7_1:7759776-7759795 Msa1007930:intron 35.0%
GGTAAGATGGTGAGAATTTA+TGG - chr7_1:7759811-7759830 Msa1007930:intron 35.0%
ATTTATGGTATCACACCATC+TGG - chr7_1:7759826-7759845 Msa1007930:intron 35.0%
GTTAGTAATGAAAATGACCG+TGG - chr7_1:7759859-7759878 Msa1007930:intron 35.0%
GGTGTCAATTGCATTATTCT+AGG - chr7_1:7760052-7760071 Msa1007930:intron 35.0%
CATAGTTGTAAAAATCGGAC+CGG - chr7_1:7760627-7760646 Msa1007930:intron 35.0%
AGGTTTGACCAATAACTCAA+TGG + chr7_1:7760690-7760709 None:intergenic 35.0%
CAACGAGAACCAAAATAAAC+CGG + chr7_1:7761218-7761237 None:intergenic 35.0%
!!! GGACTTTTTTTTTTTGGTGG+TGG - chr7_1:7761354-7761373 Msa1007930:intron 35.0%
TGCATAAAATATGCAAGGTC+CGG + chr7_1:7761394-7761413 None:intergenic 35.0%
GATTAAGGGGTTCTCTAAAT+TGG + chr7_1:7761597-7761616 None:intergenic 35.0%
! ACCAATGGAATGTCGATTAA+GGG + chr7_1:7761611-7761630 None:intergenic 35.0%
! TTTTAAGCTGGTTAACAACC+AGG - chr7_1:7761646-7761665 Msa1007930:intron 35.0%
! TTTTGTTGAAGGAAATGACC+TGG + chr7_1:7761667-7761686 None:intergenic 35.0%
! TTTTAGCAAGCTACACCTTA+AGG + chr7_1:7761877-7761896 None:intergenic 35.0%
ACTCCCACATAAAAACTAGT+GGG - chr7_1:7761898-7761917 Msa1007930:CDS 35.0%
!!! ACACCCACTAGTTTTTATGT+GGG + chr7_1:7761904-7761923 None:intergenic 35.0%
GAATTTCAAGGATGCAGTTA+TGG - chr7_1:7762473-7762492 Msa1007930:intron 35.0%
TTCTTGAATAGGTCAATCTG+TGG + chr7_1:7762501-7762520 None:intergenic 35.0%
GACCTATTCAAGAAAGTTCA+TGG - chr7_1:7762507-7762526 Msa1007930:intron 35.0%
! ATATCAACACTAGTTGATGC+AGG - chr7_1:7762654-7762673 Msa1007930:intron 35.0%
! TTAGGGATTGAACATTTTGG+AGG - chr7_1:7762871-7762890 Msa1007930:intron 35.0%
ATGTTTGAATGTGTTCCACA+AGG - chr7_1:7762898-7762917 Msa1007930:intron 35.0%
AGGAGATGCTATAATGCTTA+AGG - chr7_1:7762918-7762937 Msa1007930:intron 35.0%
GATGCTATAATGCTTAAGGT+TGG - chr7_1:7762922-7762941 Msa1007930:intron 35.0%
! ATTTTTCATCCGGCCAATTA+TGG + chr7_1:7763053-7763072 None:intergenic 35.0%
ATAATGACCTTACCATTTGG+AGG + chr7_1:7763111-7763130 None:intergenic 35.0%
TTCTTATCACCAGAAGATCT+AGG - chr7_1:7763138-7763157 Msa1007930:intron 35.0%
TTCTTTGATCCTAGATCTTC+TGG + chr7_1:7763150-7763169 None:intergenic 35.0%
AACATCATGTTTATCACAGC+TGG - chr7_1:7763198-7763217 Msa1007930:intron 35.0%
CCTAAACTCTCATATTCCTT+TGG + chr7_1:7763240-7763259 None:intergenic 35.0%
CCAAAGGAATATGAGAGTTT+AGG - chr7_1:7763237-7763256 Msa1007930:intron 35.0%
GAGAGTTTAGGTAAACAATG+TGG - chr7_1:7763249-7763268 Msa1007930:intron 35.0%
CAAATAACCAAGTCACATCT+AGG - chr7_1:7763332-7763351 Msa1007930:intron 35.0%
TATTGATCCTAGATGTGACT+TGG + chr7_1:7763342-7763361 None:intergenic 35.0%
TTATGTGTATATCTTAGGGG+TGG - chr7_1:7764142-7764161 Msa1007930:intron 35.0%
ATACCCGTTAATTATACCCT+TGG + chr7_1:7766097-7766116 None:intergenic 35.0%
AAGCAAACGAGAAGATAAGA+GGG + chr7_1:7765763-7765782 None:intergenic 35.0%
TTGCTTCTTATATGCTAGCT+AGG - chr7_1:7764590-7764609 Msa1007930:intron 35.0%
CATAGAAAAATAAGAGGGAG+TGG + chr7_1:7765715-7765734 None:intergenic 35.0%
!!! CACTCCCTCTTATTTTTCTA+TGG - chr7_1:7764622-7764641 Msa1007930:intron 35.0%
AAGTATCCATGGGTATTCAT+TGG + chr7_1:7765563-7765582 None:intergenic 35.0%
GGGTATCATATTTATCCAAC+GGG - chr7_1:7764850-7764869 Msa1007930:intron 35.0%
ATCATATTTATCCAACGGGA+CGG - chr7_1:7764854-7764873 Msa1007930:intron 35.0%
TATCATACTATCCATGTCCA+TGG - chr7_1:7764884-7764903 Msa1007930:intron 35.0%
ATCATACTATCCATGTCCAT+GGG - chr7_1:7764885-7764904 Msa1007930:intron 35.0%
GATATACTAGGGATGTCAAT+AGG + chr7_1:7764913-7764932 None:intergenic 35.0%
GGGAAAAAAGCTAGTGATTA+GGG + chr7_1:7765140-7765159 None:intergenic 35.0%
AGGGAAAAAAGCTAGTGATT+AGG + chr7_1:7765141-7765160 None:intergenic 35.0%
TTGAGATCAGATACATGCTT+AGG + chr7_1:7765164-7765183 None:intergenic 35.0%
TGACGTATGTTTATGAGAGA+GGG + chr7_1:7765258-7765277 None:intergenic 35.0%
ATGACGTATGTTTATGAGAG+AGG + chr7_1:7765259-7765278 None:intergenic 35.0%
GTTATGGTGATTTGATTAGC+GGG + chr7_1:7765300-7765319 None:intergenic 35.0%
GGTTATGGTGATTTGATTAG+CGG + chr7_1:7765358-7765377 None:intergenic 35.0%
GGTAGAAAATGGTAATCGTT+AGG + chr7_1:7765381-7765400 None:intergenic 35.0%
! ATAATGGTGGGAGATGATAA+TGG + chr7_1:7765402-7765421 None:intergenic 35.0%
ATCATACTATCCATGTCCAT+GGG + chr7_1:7764885-7764904 None:intergenic 35.0%
TATCATACTATCCATGTCCA+TGG + chr7_1:7764884-7764903 None:intergenic 35.0%
ATCATATTTATCCAACGGGA+CGG + chr7_1:7764854-7764873 None:intergenic 35.0%
GGGTATCATATTTATCCAAC+GGG + chr7_1:7764850-7764869 None:intergenic 35.0%
AAGTATCCATGGGTATTCAT+TGG - chr7_1:7765563-7765582 Msa1007930:intron 35.0%
!!! CACTCCCTCTTATTTTTCTA+TGG + chr7_1:7764622-7764641 None:intergenic 35.0%
CATAGAAAAATAAGAGGGAG+TGG - chr7_1:7765715-7765734 Msa1007930:intron 35.0%
TTGCTTCTTATATGCTAGCT+AGG + chr7_1:7764590-7764609 None:intergenic 35.0%
AAGCAAACGAGAAGATAAGA+GGG - chr7_1:7765763-7765782 Msa1007930:intron 35.0%
ATACCCGTTAATTATACCCT+TGG - chr7_1:7766097-7766116 Msa1007930:intron 35.0%
GTAGATAAACGAGTATCCAA+GGG + chr7_1:7766116-7766135 None:intergenic 35.0%
TTAGGGAAAACATGATAGCT+TGG + chr7_1:7766262-7766281 None:intergenic 35.0%
GGGAAAAAAGCTAGTGATTA+GGG + chr7_1:7765140-7765159 None:intergenic 35.0%
AGGGAAAAAAGCTAGTGATT+AGG + chr7_1:7765141-7765160 None:intergenic 35.0%
CTAAGATCAGATACATGCTT+AGG + chr7_1:7766303-7766322 None:intergenic 35.0%
ATGACATATATGTATGAGCG+AGG + chr7_1:7766398-7766417 None:intergenic 35.0%
ATGGTAATCGTTGAGAGTTA+TGG + chr7_1:7766459-7766478 None:intergenic 35.0%
GTTATGGTGATTTGATTAGC+GGG + chr7_1:7765300-7765319 None:intergenic 35.0%
GGTTATGGTGATTTGATTAG+CGG + chr7_1:7765358-7765377 None:intergenic 35.0%
TAGAAGATGGTAATCGTTAG+GGG + chr7_1:7766522-7766541 None:intergenic 35.0%
GTAGAAGATGGTAATCGTTA+GGG + chr7_1:7766523-7766542 None:intergenic 35.0%
AAACTCTTAACGACTGCTAA+AGG - chr7_1:7766593-7766612 Msa1007930:intron 35.0%
ACTTTAGTGGTAACATTTGG+GGG + chr7_1:7766627-7766646 None:intergenic 35.0%
!! ACTTTTTCTGCCTAACTTCT+AGG - chr7_1:7766878-7766897 Msa1007930:intron 35.0%
! TGAATATTTCTACGAGCTAC+TGG - chr7_1:7766932-7766951 Msa1007930:intron 35.0%
ATTATTGCTTTCCAGTACCT+TGG - chr7_1:7767083-7767102 Msa1007930:intron 35.0%
! TTTGAAATCTACTTCCACCA+AGG + chr7_1:7767103-7767122 None:intergenic 35.0%
! TAGGAACTACGTGATACTTT+TGG - chr7_1:7767346-7767365 Msa1007930:intron 35.0%
! ATACTAATCGTTGATGGAGA+TGG - chr7_1:7768504-7768523 Msa1007930:intron 35.0%
! ACGTCCTCAAATGTTGTTTA+TGG - chr7_1:7768540-7768559 Msa1007930:intron 35.0%
TTCGCCATAAACAACATTTG+AGG + chr7_1:7768547-7768566 None:intergenic 35.0%
TCGATTAACTTCTATGTGGT+AGG - chr7_1:7768693-7768712 Msa1007930:intron 35.0%
! TGTCACTATTTCATTTGGTG+GGG + chr7_1:7768807-7768826 None:intergenic 35.0%
! GTGTCACTATTTCATTTGGT+GGG + chr7_1:7768808-7768827 None:intergenic 35.0%
! TGTGTCACTATTTCATTTGG+TGG + chr7_1:7768809-7768828 None:intergenic 35.0%
! TTGTTTTCGTGATCCTTTGA+TGG + chr7_1:7768903-7768922 None:intergenic 35.0%
GTAGCATAGTGAGAGTTTAT+GGG - chr7_1:7769245-7769264 Msa1007930:intron 35.0%
CCTAATATTAGATGGTCCAA+CGG - chr7_1:7769643-7769662 Msa1007930:intron 35.0%
TTTGTTAAAGAGTCTCGCAT+CGG + chr7_1:7769791-7769810 None:intergenic 35.0%
TAGCCGCTAAGTTTGAATAT+GGG - chr7_1:7769949-7769968 Msa1007930:intron 35.0%
TCACCCATATTCAAACTTAG+CGG + chr7_1:7769955-7769974 None:intergenic 35.0%
AAGGCTAAAAAACAAGGTCA+TGG + chr7_1:7770012-7770031 None:intergenic 35.0%
AACATGTCGTCAAGAATTCA+AGG + chr7_1:7770031-7770050 None:intergenic 35.0%
GAAGCAATTATTGATCCAGA+AGG - chr7_1:7770139-7770158 Msa1007930:intron 35.0%
AGCAATTATTGATCCAGAAG+GGG - chr7_1:7770141-7770160 Msa1007930:intron 35.0%
GACCTGTTCAAAAAAGTTCA+TGG - chr7_1:7770163-7770182 Msa1007930:intron 35.0%
TTGATATTCCCTCAAATCCT+TGG + chr7_1:7770297-7770316 None:intergenic 35.0%
! ATCAACTTTGGTTGATGTAG+GGG - chr7_1:7770312-7770331 Msa1007930:intron 35.0%
CTCCAAATACCCATCAATAA+AGG - chr7_1:7770366-7770385 Msa1007930:intron 35.0%
! TGCCTTTATTGATGGGTATT+TGG + chr7_1:7770371-7770390 None:intergenic 35.0%
AGAAATAGATTACCTGGACA+AGG + chr7_1:7770433-7770452 None:intergenic 35.0%
!! TTAGGCATTGAATATGTTGG+AGG - chr7_1:7770527-7770546 Msa1007930:intron 35.0%
!! ATGTTTGAAAGTGTTCCCAA+AGG - chr7_1:7770554-7770573 Msa1007930:intron 35.0%
TTGAGTATTACACTAGAGCA+TGG - chr7_1:7771096-7771115 Msa1007930:intron 35.0%
! ACTTTTCATCCGACCAATTA+TGG + chr7_1:7771289-7771308 None:intergenic 35.0%
ATGAGAATGAGCTTTCCATT+TGG + chr7_1:7771350-7771369 None:intergenic 35.0%
!! TTTGTTGGTTCTAGATCTTC+TGG + chr7_1:7771386-7771405 None:intergenic 35.0%
AACCAACAAATGTATCTCGA+TGG - chr7_1:7771396-7771415 Msa1007930:CDS 35.0%
TGTGAAGGAATATGAGAGTT+TGG - chr7_1:7771472-7771491 Msa1007930:CDS 35.0%
GTGAAGGAATATGAGAGTTT+GGG - chr7_1:7771473-7771492 Msa1007930:CDS 35.0%
TGTCTTGCTTTCTCTATCAT+TGG - chr7_1:7771530-7771549 Msa1007930:CDS 35.0%
TTTCTCTATCATTGGAGTGA+TGG - chr7_1:7771538-7771557 Msa1007930:CDS 35.0%
TTGTCATCTATTTGTGGGGT+GGG + chr7_1:7759547-7759566 None:intergenic 40.0%
ATTGTCATCTATTTGTGGGG+TGG + chr7_1:7759548-7759567 None:intergenic 40.0%
CAATGATACACTCTCAGCTA+TGG - chr7_1:7759564-7759583 Msa1007930:CDS 40.0%
AGCATACGATCAAGCCTATT+TGG + chr7_1:7759736-7759755 None:intergenic 40.0%
TGAAAATGACCGTGGCTATT+TGG - chr7_1:7759867-7759886 Msa1007930:intron 40.0%
GAAAATGACCGTGGCTATTT+GGG - chr7_1:7759868-7759887 Msa1007930:intron 40.0%
AAAATGACCGTGGCTATTTG+GGG - chr7_1:7759869-7759888 Msa1007930:intron 40.0%
!!! TCTTTTTTTTGGTGGTGGTC+AGG - chr7_1:7760105-7760124 Msa1007930:intron 40.0%
TAGCTCAATTGGTAAGGGTA+AGG + chr7_1:7760167-7760186 None:intergenic 40.0%
GAGCTTAGCTCAATTGGTAA+GGG + chr7_1:7760172-7760191 None:intergenic 40.0%
TGAGCTTAGCTCAATTGGTA+AGG + chr7_1:7760173-7760192 None:intergenic 40.0%
TTAGAAACTGACCATGAGAC+TGG - chr7_1:7760455-7760474 Msa1007930:intron 40.0%
!!! ACTTGTTTTGTCCAGTCTCA+TGG + chr7_1:7760469-7760488 None:intergenic 40.0%
! CGGTCCGATTTTTACAACTA+TGG + chr7_1:7760629-7760648 None:intergenic 40.0%
! AGAGGTTTTCTCAAACGAGT+CGG + chr7_1:7761189-7761208 None:intergenic 40.0%
AAAATAAACCGGTGACTCAG+AGG + chr7_1:7761207-7761226 None:intergenic 40.0%
!!! TCTGAGTCACCGGTTTATTT+TGG - chr7_1:7761206-7761225 Msa1007930:intron 40.0%
!!! CGGTTTATTTTGGTTCTCGT+TGG - chr7_1:7761216-7761235 Msa1007930:intron 40.0%
!!! TTTTTTTTTTGGTGGTGGCC+AGG - chr7_1:7761359-7761378 Msa1007930:intron 40.0%
!!! TTTTTTTTTGGTGGTGGCCA+GGG - chr7_1:7761360-7761379 Msa1007930:intron 40.0%
CATAAAATATGCAAGGTCCG+GGG + chr7_1:7761392-7761411 None:intergenic 40.0%
GCATAAAATATGCAAGGTCC+GGG + chr7_1:7761393-7761412 None:intergenic 40.0%
! TGAGCTTAGATCAGTTGGTA+TGG + chr7_1:7761421-7761440 None:intergenic 40.0%
GCTCACGATGACATCTAATA+TGG - chr7_1:7761436-7761455 Msa1007930:intron 40.0%
! CCAATGGAATGTCGATTAAG+GGG + chr7_1:7761610-7761629 None:intergenic 40.0%
! GACCAATGGAATGTCGATTA+AGG + chr7_1:7761612-7761631 None:intergenic 40.0%
AACAAAGTTGACCAATGACC+TGG + chr7_1:7761695-7761714 None:intergenic 40.0%
CACTCCCACATAAAAACTAG+TGG - chr7_1:7761897-7761916 Msa1007930:CDS 40.0%
!!! CACACCCACTAGTTTTTATG+TGG + chr7_1:7761905-7761924 None:intergenic 40.0%
GTGCATGTTCAATCACTTGT+GGG + chr7_1:7762752-7762771 None:intergenic 40.0%
AAACGATTACCTTGATAGGG+TGG + chr7_1:7762774-7762793 None:intergenic 40.0%
AGCATTATAGCATCTCCTTG+TGG + chr7_1:7762916-7762935 None:intergenic 40.0%
! TGTAGCTTGTGTGCCATAAT+TGG - chr7_1:7763037-7763056 Msa1007930:intron 40.0%
ATCATGTTTATCACAGCTGG+TGG - chr7_1:7763201-7763220 Msa1007930:intron 40.0%
TGGTAAGGAAAGAACTCCAA+AGG - chr7_1:7763221-7763240 Msa1007930:intron 40.0%
ATCACTCGCAGATAATGTGT+GGG + chr7_1:7763580-7763599 None:intergenic 40.0%
AATCACTCGCAGATAATGTG+TGG + chr7_1:7763581-7763600 None:intergenic 40.0%
!!! AGCGCTTGGTTTGCTTTTTA+TGG + chr7_1:7763700-7763719 None:intergenic 40.0%
ACGCATAAAACAGAGGATTC+TGG + chr7_1:7763826-7763845 None:intergenic 40.0%
GTAGATAAACGGGTATCCAA+GGG - chr7_1:7764223-7764242 Msa1007930:intron 40.0%
GAAGCAAACGAGAAGATAAG+AGG + chr7_1:7765762-7765781 None:intergenic 40.0%
!! GTGGGTATTGAAGTATCCAT+GGG + chr7_1:7765553-7765572 None:intergenic 40.0%
CATGGATACTTCAATACCCA+CGG - chr7_1:7764785-7764804 Msa1007930:intron 40.0%
ATGGATACTTCAATACCCAC+GGG - chr7_1:7764786-7764805 Msa1007930:intron 40.0%
TCATATTTATCCAACGGGAC+GGG - chr7_1:7764855-7764874 Msa1007930:intron 40.0%
TTAGGGCAAACATGATAGCT+TGG + chr7_1:7765123-7765142 None:intergenic 40.0%
GATCAGATACATGCTTAGGA+GGG + chr7_1:7765160-7765179 None:intergenic 40.0%
AGATCAGATACATGCTTAGG+AGG + chr7_1:7765161-7765180 None:intergenic 40.0%
ATGGTAATCGTTGGGAGTTA+TGG + chr7_1:7765316-7765335 None:intergenic 40.0%
ATGGTAATCGTTAGGGGTTA+TGG + chr7_1:7765373-7765392 None:intergenic 40.0%
! AGGTAGGATACGATAATGGT+GGG + chr7_1:7765414-7765433 None:intergenic 40.0%
! TAGGTAGGATACGATAATGG+TGG + chr7_1:7765415-7765434 None:intergenic 40.0%
ACCATTATCGTATCCTACCT+AGG - chr7_1:7765414-7765433 Msa1007930:intron 40.0%
CCATTATCGTATCCTACCTA+GGG - chr7_1:7765415-7765434 Msa1007930:intron 40.0%
TCATATTTATCCAACGGGAC+GGG + chr7_1:7764855-7764874 None:intergenic 40.0%
ATGGATACTTCAATACCCAC+GGG + chr7_1:7764786-7764805 None:intergenic 40.0%
CATGGATACTTCAATACCCA+CGG + chr7_1:7764785-7764804 None:intergenic 40.0%
!! GTGGGTATTGAAGTATCCAT+GGG - chr7_1:7765553-7765572 Msa1007930:intron 40.0%
GAAGCAAACGAGAAGATAAG+AGG - chr7_1:7765762-7765781 Msa1007930:intron 40.0%
GGTAGATAAACGAGTATCCA+AGG + chr7_1:7766117-7766136 None:intergenic 40.0%
GATCAGATACATGCTTAGGA+GGG + chr7_1:7765160-7765179 None:intergenic 40.0%
AGATCAGATACATGCTTAGG+AGG + chr7_1:7765161-7765180 None:intergenic 40.0%
GAGATAACAATGGTAGGAGA+TGG + chr7_1:7766478-7766497 None:intergenic 40.0%
TGATTAGCGGGAGATAACAA+TGG + chr7_1:7766488-7766507 None:intergenic 40.0%
ATGGTAATCGTTAGGGGTTA+TGG + chr7_1:7765373-7765392 None:intergenic 40.0%
GGTAGAAGATGGTAATCGTT+AGG + chr7_1:7766524-7766543 None:intergenic 40.0%
ATGATGGTAGGAGACGATAA+TGG + chr7_1:7766561-7766580 None:intergenic 40.0%
GCTATCCGAAATAGAGTGAT+AGG - chr7_1:7766696-7766715 Msa1007930:intron 40.0%
CACAGTGCATGTACAAAATC+AGG - chr7_1:7766783-7766802 Msa1007930:intron 40.0%
! TGACACTTGCTAGATTGTGA+TGG - chr7_1:7766960-7766979 Msa1007930:intron 40.0%
ACCATATCATTCCATGAGTG+CGG - chr7_1:7767163-7767182 Msa1007930:intron 40.0%
!! ACCTTTGAAGTTCCTATCGT+TGG - chr7_1:7767203-7767222 Msa1007930:intron 40.0%
TCCAACGATAGGAACTTCAA+AGG + chr7_1:7767207-7767226 None:intergenic 40.0%
GAAGTTCCTATCGTTGGATA+TGG - chr7_1:7767209-7767228 Msa1007930:intron 40.0%
CCGAACATCACATTTGGTAT+GGG + chr7_1:7767462-7767481 None:intergenic 40.0%
CCCATACCAAATGTGATGTT+CGG - chr7_1:7767459-7767478 Msa1007930:intron 40.0%
TCCGAACATCACATTTGGTA+TGG + chr7_1:7767463-7767482 None:intergenic 40.0%
! CCTTTTCCGAACATCACATT+TGG + chr7_1:7767468-7767487 None:intergenic 40.0%
CCAAATGTGATGTTCGGAAA+AGG - chr7_1:7767465-7767484 Msa1007930:intron 40.0%
ATGTGATGTTCGGAAAAGGT+TGG - chr7_1:7767469-7767488 Msa1007930:intron 40.0%
GTCATGTGTTTATCAACGCT+TGG + chr7_1:7767586-7767605 None:intergenic 40.0%
!! AGCGTTGATAAACACATGAC+TGG - chr7_1:7767586-7767605 Msa1007930:intron 40.0%
!! TATTCACTCGCCTGCTTTTA+AGG + chr7_1:7768038-7768057 None:intergenic 40.0%
GTTGTACGTTGCAATTTCCA+TGG - chr7_1:7768458-7768477 Msa1007930:CDS 40.0%
TTCCATGGTCACTTCAAGAT+AGG - chr7_1:7768473-7768492 Msa1007930:CDS 40.0%
TCCATGGTCACTTCAAGATA+GGG - chr7_1:7768474-7768493 Msa1007930:CDS 40.0%
CAATGATACACTCTCTGCTA+TGG - chr7_1:7768991-7769010 Msa1007930:intron 40.0%
!! TATGGTACTTGGTGCCAATA+TGG - chr7_1:7769009-7769028 Msa1007930:intron 40.0%
! AACACTCTGATTTGCCGAAT+AGG - chr7_1:7769152-7769171 Msa1007930:intron 40.0%
AACATACGATCGAGCCTATT+CGG + chr7_1:7769169-7769188 None:intergenic 40.0%
!! CTCTTCTGTCTGTTTCTACT+CGG - chr7_1:7769209-7769228 Msa1007930:intron 40.0%
CACTATGCTACCATCATCAT+TGG + chr7_1:7769236-7769255 None:intergenic 40.0%
GGTAGCATAGTGAGAGTTTA+TGG - chr7_1:7769244-7769263 Msa1007930:intron 40.0%
CCGTTGGACCATCTAATATT+AGG + chr7_1:7769646-7769665 None:intergenic 40.0%
GATTCTCCTCAAAAATCCGT+TGG + chr7_1:7769662-7769681 None:intergenic 40.0%
GGACATGAGTTTATAAGTGG+AGG + chr7_1:7769754-7769773 None:intergenic 40.0%
CTCGGACATGAGTTTATAAG+TGG + chr7_1:7769757-7769776 None:intergenic 40.0%
GTAGCCGCTAAGTTTGAATA+TGG - chr7_1:7769948-7769967 Msa1007930:intron 40.0%
! TCAACTTTGGTTGATGTAGG+GGG - chr7_1:7770313-7770332 Msa1007930:intron 40.0%
AATAGATTACCTGGACAAGG+TGG + chr7_1:7770430-7770449 None:intergenic 40.0%
GGGGGACTAAAATCAAATGT+TGG + chr7_1:7771009-7771028 None:intergenic 40.0%
GTCCCCCTAAAACATTTCTT+AGG - chr7_1:7771022-7771041 Msa1007930:intron 40.0%
TACAAAGCTTTGCCACCAAA+TGG - chr7_1:7771332-7771351 Msa1007930:intron 40.0%
AGAATGAGCTTTCCATTTGG+TGG + chr7_1:7771347-7771366 None:intergenic 40.0%
! TCTAGATCTTCTGGTTGCAA+GGG + chr7_1:7771377-7771396 None:intergenic 40.0%
! TTCTAGATCTTCTGGTTGCA+AGG + chr7_1:7771378-7771397 None:intergenic 40.0%
AGCCATCGAGATACATTTGT+TGG + chr7_1:7771401-7771420 None:intergenic 40.0%
AACATGATGTTTGTCACAGC+TGG - chr7_1:7771434-7771453 Msa1007930:CDS 40.0%
! TGGAATGGAAAGAAGTGTGA+AGG - chr7_1:7771457-7771476 Msa1007930:CDS 40.0%
ACACTCTCAGCTATGGTACT+TGG - chr7_1:7759571-7759590 Msa1007930:CDS 45.0%
ATTGCAGCGTTAAGAACTGC+AGG + chr7_1:7759613-7759632 None:intergenic 45.0%
! AGCACTCTGACTTGCCAAAT+AGG - chr7_1:7759719-7759738 Msa1007930:intron 45.0%
GACCAATGATGCTGGTAAGA+TGG - chr7_1:7759798-7759817 Msa1007930:intron 45.0%
CACCATCTTACCAGCATCAT+TGG + chr7_1:7759803-7759822 None:intergenic 45.0%
TCATTGACCCCAAATAGCCA+CGG + chr7_1:7759879-7759898 None:intergenic 45.0%
TTGTGTCACCCTGCTTTCTT+AGG - chr7_1:7759907-7759926 Msa1007930:intron 45.0%
TGTGTCACCCTGCTTTCTTA+GGG - chr7_1:7759908-7759927 Msa1007930:intron 45.0%
! GAGGTTTTCTCAAACGAGTC+GGG + chr7_1:7761188-7761207 None:intergenic 45.0%
TGAGAAAACCTCTGAGTCAC+CGG - chr7_1:7761196-7761215 Msa1007930:intron 45.0%
CCGATCAAATCGATCTAACC+GGG + chr7_1:7761315-7761334 None:intergenic 45.0%
!! CCCGGTTAGATCGATTTGAT+CGG - chr7_1:7761312-7761331 Msa1007930:intron 45.0%
CCCGATCAAATCGATCTAAC+CGG + chr7_1:7761316-7761335 None:intergenic 45.0%
!! CCGGTTAGATCGATTTGATC+GGG - chr7_1:7761313-7761332 Msa1007930:intron 45.0%
TTGATCGGGAGCTAATACGA+CGG - chr7_1:7761327-7761346 Msa1007930:intron 45.0%
CATCGTGAGCTTAGATCAGT+TGG + chr7_1:7761426-7761445 None:intergenic 45.0%
CCCCTTAATCGACATTCCAT+TGG - chr7_1:7761607-7761626 Msa1007930:intron 45.0%
! TCAACACTAGTTGATGCAGG+AGG - chr7_1:7762657-7762676 Msa1007930:intron 45.0%
CATGTTCAATCACTTGTGGG+AGG + chr7_1:7762749-7762768 None:intergenic 45.0%
GGTGCATGTTCAATCACTTG+TGG + chr7_1:7762753-7762772 None:intergenic 45.0%
CACAAAGCTTTGCCTCCAAA+TGG - chr7_1:7763096-7763115 Msa1007930:intron 45.0%
AGCTTTGCCTCCAAATGGTA+AGG - chr7_1:7763101-7763120 Msa1007930:intron 45.0%
GTTTATCACAGCTGGTGGTA+AGG - chr7_1:7763206-7763225 Msa1007930:intron 45.0%
GCAAAAATACCCATGCCCAT+GGG - chr7_1:7764164-7764183 Msa1007930:intron 45.0%
GGTAGATAAACGGGTATCCA+AGG - chr7_1:7764222-7764241 Msa1007930:intron 45.0%
! TTTGATGGTACCCATACCCA+CGG - chr7_1:7764297-7764316 Msa1007930:intron 45.0%
TATTGGATATGGGTACCCGT+GGG + chr7_1:7766023-7766042 None:intergenic 45.0%
TTATTGGATATGGGTACCCG+TGG + chr7_1:7766022-7766041 None:intergenic 45.0%
AGAAGAAGGATGGCTGCAAT+GGG + chr7_1:7765820-7765839 None:intergenic 45.0%
AAGAAGAAGGATGGCTGCAA+TGG + chr7_1:7765819-7765838 None:intergenic 45.0%
TGGGTATTCATTGGTACCCA+TGG + chr7_1:7765572-7765591 None:intergenic 45.0%
TGGGTACCAATGAATACCCA+TGG - chr7_1:7764767-7764786 Msa1007930:intron 45.0%
!! CGTGGGTATTGAAGTATCCA+TGG + chr7_1:7765552-7765571 None:intergenic 45.0%
CTCATGGGTACCCATTATGT+GGG + chr7_1:7765525-7765544 None:intergenic 45.0%
!! CACATAATGGGTACCCATGA+GGG - chr7_1:7764813-7764832 Msa1007930:intron 45.0%
TCAATAGGTACCCATGGACA+TGG + chr7_1:7765441-7765460 None:intergenic 45.0%
GGTAGGAGATGGTAATCGTT+GGG + chr7_1:7765324-7765343 None:intergenic 45.0%
TGGTAGGAGATGGTAATCGT+TGG + chr7_1:7765325-7765344 None:intergenic 45.0%
GAGATGACAATGGTAGGAGA+TGG + chr7_1:7765335-7765354 None:intergenic 45.0%
TGATTAGCGGGAGATGACAA+TGG + chr7_1:7765345-7765364 None:intergenic 45.0%
CCCTAGGTAGGATACGATAA+TGG + chr7_1:7765418-7765437 None:intergenic 45.0%
TCCTACCTAGGGATGTCAAT+AGG - chr7_1:7765426-7765445 Msa1007930:intron 45.0%
ACCTATTGACATCCCTAGGT+AGG + chr7_1:7765430-7765449 None:intergenic 45.0%
TCAATAGGTACCCATGGACA+TGG - chr7_1:7765441-7765460 Msa1007930:intron 45.0%
!! CACATAATGGGTACCCATGA+GGG + chr7_1:7764813-7764832 None:intergenic 45.0%
CTCATGGGTACCCATTATGT+GGG - chr7_1:7765525-7765544 Msa1007930:intron 45.0%
!! CGTGGGTATTGAAGTATCCA+TGG - chr7_1:7765552-7765571 Msa1007930:intron 45.0%
TGGGTACCAATGAATACCCA+TGG + chr7_1:7764767-7764786 None:intergenic 45.0%
TGGGTATTCATTGGTACCCA+TGG - chr7_1:7765572-7765591 Msa1007930:intron 45.0%
AAGAAGAAGGATGGCTGCAA+TGG - chr7_1:7765819-7765838 Msa1007930:intron 45.0%
AGAAGAAGGATGGCTGCAAT+GGG - chr7_1:7765820-7765839 Msa1007930:intron 45.0%
TTATTGGATATGGGTACCCG+TGG - chr7_1:7766022-7766041 Msa1007930:intron 45.0%
TATTGGATATGGGTACCCGT+GGG - chr7_1:7766023-7766042 Msa1007930:intron 45.0%
! TTTGATGGTACCCATACCCA+CGG + chr7_1:7764297-7764316 None:intergenic 45.0%
GCAAAAATACCCATGCCCAT+GGG + chr7_1:7764164-7764183 None:intergenic 45.0%
AATGATGGTAGGATTAGGGG+TGG + chr7_1:7766197-7766216 None:intergenic 45.0%
TAGCGGGAGATAACAATGGT+AGG + chr7_1:7766484-7766503 None:intergenic 45.0%
! TGGTAGGAGACGATAATGGT+GGG + chr7_1:7766557-7766576 None:intergenic 45.0%
! ATGGTAGGAGACGATAATGG+TGG + chr7_1:7766558-7766577 None:intergenic 45.0%
!! CTGCCTAACTTCTAGGATGT+CGG - chr7_1:7766885-7766904 Msa1007930:intron 45.0%
TCTCCGACATCCTAGAAGTT+AGG + chr7_1:7766891-7766910 None:intergenic 45.0%
CTCCAACCATCTGTCAACAA+CGG + chr7_1:7767026-7767045 None:intergenic 45.0%
ATTGCTTTCCAGTACCTTGG+TGG - chr7_1:7767086-7767105 Msa1007930:intron 45.0%
ATCTACTTCCACCAAGGTAC+TGG + chr7_1:7767097-7767116 None:intergenic 45.0%
GCACTCATGGAATGATATGG+TGG + chr7_1:7767164-7767183 None:intergenic 45.0%
GTCGATCCATATCCAACGAT+AGG + chr7_1:7767218-7767237 None:intergenic 45.0%
! ACGAGTTTTTGTGCTGCCAA+TGG - chr7_1:7767492-7767511 Msa1007930:intron 45.0%
TTGTGCTGCCAATGGTATTG+AGG - chr7_1:7767500-7767519 Msa1007930:intron 45.0%
! TGTGCTGCCAATGGTATTGA+GGG - chr7_1:7767501-7767520 Msa1007930:intron 45.0%
! TTTCAAGTGCAAGTGCGTCA+TGG - chr7_1:7767539-7767558 Msa1007930:intron 45.0%
AACTGACCATGCTAGAACAC+AGG + chr7_1:7768441-7768460 None:intergenic 45.0%
ACCCTATCTTGAAGTGACCA+TGG + chr7_1:7768478-7768497 None:intergenic 45.0%
AAGCAAGCACACACCATCAA+AGG - chr7_1:7768887-7768906 Msa1007930:intron 45.0%
ACACTCTCTGCTATGGTACT+TGG - chr7_1:7768998-7769017 Msa1007930:intron 45.0%
TGCCAATATGGTGTTTCCTG+CGG - chr7_1:7769021-7769040 Msa1007930:intron 45.0%
AACCGCAGGAAACACCATAT+TGG + chr7_1:7769026-7769045 None:intergenic 45.0%
!! GGCAAATCAGAGTGTTGAGT+TGG + chr7_1:7769148-7769167 None:intergenic 45.0%
TCTACTCGGACCAATGATGA+TGG - chr7_1:7769223-7769242 Msa1007930:intron 45.0%
GTTTATGGGATCACACCATC+TGG - chr7_1:7769259-7769278 Msa1007930:intron 45.0%
ACCACACCATTGACAAAGCA+GGG + chr7_1:7769351-7769370 None:intergenic 45.0%
TACCACACCATTGACAAAGC+AGG + chr7_1:7769352-7769371 None:intergenic 45.0%
!! GATGGTCCAACGGATTTTTG+AGG - chr7_1:7769653-7769672 Msa1007930:intron 45.0%
GTAATCCTCACCTCACAAGT+CGG + chr7_1:7769732-7769751 None:intergenic 45.0%
! TTTTTGAACAGGTCCCCTTC+TGG + chr7_1:7770157-7770176 None:intergenic 45.0%
GAAAATACACCACCTTGTCC+AGG - chr7_1:7770418-7770437 Msa1007930:intron 45.0%
TCTAGGCTGTCAGCCATAAT+TGG - chr7_1:7771273-7771292 Msa1007930:CDS 45.0%
ATGATGTTTGTCACAGCTGG+TGG - chr7_1:7771437-7771456 Msa1007930:CDS 45.0%
GAGAGTTTGGGAAAACGATC+TGG - chr7_1:7771485-7771504 Msa1007930:CDS 45.0%
!! AAATATTTATCTATAAAATT+AGG + chr7_1:7762105-7762124 None:intergenic 5.0%
!!! GATTTTTTTATTTTTTTTTT+AGG + chr7_1:7763883-7763902 None:intergenic 5.0%
!! TAATTAACTTAATTTATTAT+TGG + chr7_1:7766006-7766025 None:intergenic 5.0%
!! TAATTAACTTAATTTATTAT+TGG - chr7_1:7766006-7766025 Msa1007930:intron 5.0%
!!! TTTTTTTTCTTTTTTTTTTT+AGG - chr7_1:7767327-7767346 Msa1007930:intron 5.0%
TCTACTCGGACCAATGATGC+TGG - chr7_1:7759790-7759809 Msa1007930:intron 50.0%
GTGTCACCCTGCTTTCTTAG+GGG - chr7_1:7759909-7759928 Msa1007930:intron 50.0%
ACCACACCCCTAAGAAAGCA+GGG + chr7_1:7759918-7759937 None:intergenic 50.0%
TACCACACCCCTAAGAAAGC+AGG + chr7_1:7759919-7759938 None:intergenic 50.0%
CCTCGTGAGCTTAGCTCAAT+TGG + chr7_1:7760178-7760197 None:intergenic 50.0%
CCAATTGAGCTAAGCTCACG+AGG - chr7_1:7760175-7760194 Msa1007930:intron 50.0%
TTTGATACGAGCACCCTACC+AGG + chr7_1:7760660-7760679 None:intergenic 50.0%
AAATCGATCTAACCGGGAGC+AGG + chr7_1:7761309-7761328 None:intergenic 50.0%
! ACACTAGTTGATGCAGGAGG+TGG - chr7_1:7762660-7762679 Msa1007930:intron 50.0%
GTTGATGCAGGAGGTGGAAA+TGG - chr7_1:7762666-7762685 Msa1007930:intron 50.0%
GAACATGCACCACCCTATCA+AGG - chr7_1:7762762-7762781 Msa1007930:intron 50.0%
GCTTGTGTGCCATAATTGGC+CGG - chr7_1:7763041-7763060 Msa1007930:intron 50.0%
TGTCGTGCTTTCTCCATCCT+CGG - chr7_1:7763294-7763313 Msa1007930:intron 50.0%
TTTCTCCATCCTCGGAGTGA+TGG - chr7_1:7763302-7763321 Msa1007930:intron 50.0%
TGTAGAGTTCCATCACTCCG+AGG + chr7_1:7763314-7763333 None:intergenic 50.0%
TATGACTGGGCACCAAAGTC+TGG - chr7_1:7763727-7763746 Msa1007930:intron 50.0%
ATGACTGGGCACCAAAGTCT+GGG - chr7_1:7763728-7763747 Msa1007930:intron 50.0%
! GCCCTTGATAGCTTCGTTCT+GGG - chr7_1:7763759-7763778 Msa1007930:intron 50.0%
GCCCAGAACGAAGCTATCAA+GGG + chr7_1:7763763-7763782 None:intergenic 50.0%
! ACGGGCATCACATGCGATTT+TGG - chr7_1:7763796-7763815 Msa1007930:intron 50.0%
! CGGGCATCACATGCGATTTT+GGG - chr7_1:7763797-7763816 Msa1007930:intron 50.0%
GGCAAAAATACCCATGCCCA+TGG - chr7_1:7764163-7764182 Msa1007930:intron 50.0%
GGTAAAATCCATCACGGGCA+CGG - chr7_1:7764195-7764214 Msa1007930:intron 50.0%
GTAAAATCCATCACGGGCAC+GGG - chr7_1:7764196-7764215 Msa1007930:intron 50.0%
TAAAATCCATCACGGGCACG+GGG - chr7_1:7764197-7764216 Msa1007930:intron 50.0%
GGACACTGACACGGATTTGA+TGG - chr7_1:7764282-7764301 Msa1007930:intron 50.0%
! TTGATGGTACCCATACCCAC+GGG - chr7_1:7764298-7764317 Msa1007930:intron 50.0%
ATATGGGTACCCGTGGGTAT+GGG + chr7_1:7766029-7766048 None:intergenic 50.0%
CCTCATGGGTACCCATTATG+TGG + chr7_1:7765524-7765543 None:intergenic 50.0%
!! CCACATAATGGGTACCCATG+AGG - chr7_1:7764812-7764831 Msa1007930:intron 50.0%
AATGGGTACCCATGAGGGTA+CGG - chr7_1:7764818-7764837 Msa1007930:intron 50.0%
GGGATGTCAATAGGTACCCA+TGG + chr7_1:7765435-7765454 None:intergenic 50.0%
TAGCGGGAGATGACAATGGT+AGG + chr7_1:7765341-7765360 None:intergenic 50.0%
GGGTACCTATTGACATCCCT+AGG + chr7_1:7764905-7764924 None:intergenic 50.0%
GGGATGTCAATAGGTACCCA+TGG - chr7_1:7765435-7765454 Msa1007930:intron 50.0%
AATGGGTACCCATGAGGGTA+CGG + chr7_1:7764818-7764837 None:intergenic 50.0%
!! CCACATAATGGGTACCCATG+AGG + chr7_1:7764812-7764831 None:intergenic 50.0%
CCTCATGGGTACCCATTATG+TGG - chr7_1:7765524-7765543 Msa1007930:intron 50.0%
ATATGGGTACCCGTGGGTAT+GGG - chr7_1:7766029-7766048 Msa1007930:intron 50.0%
! TTGATGGTACCCATACCCAC+GGG + chr7_1:7764298-7764317 None:intergenic 50.0%
GGACACTGACACGGATTTGA+TGG + chr7_1:7764282-7764301 None:intergenic 50.0%
TAAAATCCATCACGGGCACG+GGG + chr7_1:7764197-7764216 None:intergenic 50.0%
GTAAAATCCATCACGGGCAC+GGG + chr7_1:7764196-7764215 None:intergenic 50.0%
GGTAAAATCCATCACGGGCA+CGG + chr7_1:7764195-7764214 None:intergenic 50.0%
GGCAAAAATACCCATGCCCA+TGG + chr7_1:7764163-7764182 None:intergenic 50.0%
TGTTGGCCGTTGTTGACAGA+TGG - chr7_1:7767017-7767036 Msa1007930:intron 50.0%
GCCGCACTCATGGAATGATA+TGG + chr7_1:7767167-7767186 None:intergenic 50.0%
! ACATGATGATGCCGCACTCA+TGG + chr7_1:7767177-7767196 None:intergenic 50.0%
TGGATCGACGAAATCACCGA+AGG - chr7_1:7767229-7767248 Msa1007930:intron 50.0%
CCATGCTAGAACACAGGACT+CGG + chr7_1:7768435-7768454 None:intergenic 50.0%
TCTATGTGGTAGGATCCGTG+CGG - chr7_1:7768703-7768722 Msa1007930:intron 50.0%
ATTGCAGCGTTAAGAACCGC+AGG + chr7_1:7769040-7769059 None:intergenic 50.0%
GTCTCACCCTGCTTTGTCAA+TGG - chr7_1:7769342-7769361 Msa1007930:intron 50.0%
ACCCTGCTTTGTCAATGGTG+TGG - chr7_1:7769347-7769366 Msa1007930:intron 50.0%
! ACCTCACAAGTCGGTTTCGT+GGG + chr7_1:7769723-7769742 None:intergenic 50.0%
GCATCGGATCAAAGATGGCT+CGG + chr7_1:7769775-7769794 None:intergenic 50.0%
GTCTCGCATCGGATCAAAGA+TGG + chr7_1:7769780-7769799 None:intergenic 50.0%
! ACTTTGGTTGATGTAGGGGG+TGG - chr7_1:7770316-7770335 Msa1007930:intron 50.0%
GGCTGTCAGCCATAATTGGT+CGG - chr7_1:7771277-7771296 Msa1007930:CDS 50.0%
GTTTGTCACAGCTGGTGGAA+TGG - chr7_1:7771442-7771461 Msa1007930:CDS 50.0%
!! GGCAAGTCAGAGTGCTGAGT+TGG + chr7_1:7759715-7759734 None:intergenic 55.0%
ACCCTGCTTTCTTAGGGGTG+TGG - chr7_1:7759914-7759933 Msa1007930:intron 55.0%
ATACGAGCACCCTACCAGGT+CGG + chr7_1:7760656-7760675 None:intergenic 55.0%
GGGAGCTAATACGACGGATG+TGG - chr7_1:7761333-7761352 Msa1007930:intron 55.0%
GAGTTCCATCACTCCGAGGA+TGG + chr7_1:7763310-7763329 None:intergenic 55.0%
AGTCATAGAGAGCGAGCGCT+TGG + chr7_1:7763714-7763733 None:intergenic 55.0%
AAGCGCTCGCTCTCTATGAC+TGG - chr7_1:7763713-7763732 Msa1007930:intron 55.0%
AGCGCTCGCTCTCTATGACT+GGG - chr7_1:7763714-7763733 Msa1007930:intron 55.0%
! CGCCCTTGATAGCTTCGTTC+TGG - chr7_1:7763758-7763777 Msa1007930:intron 55.0%
CGCCCAGAACGAAGCTATCA+AGG + chr7_1:7763764-7763783 None:intergenic 55.0%
! ATAGCTTCGTTCTGGGCGCT+AGG - chr7_1:7763766-7763785 Msa1007930:intron 55.0%
! TTTTACCCGCGGGTACCCAT+GGG + chr7_1:7766157-7766176 None:intergenic 55.0%
! ATTTTACCCGCGGGTACCCA+TGG + chr7_1:7766156-7766175 None:intergenic 55.0%
!!! CCGTGATGGATTTTACCCGC+GGG + chr7_1:7766147-7766166 None:intergenic 55.0%
CCCGCGGGTAAAATCCATCA+CGG - chr7_1:7764189-7764208 Msa1007930:intron 55.0%
!!! CCCGTGATGGATTTTACCCG+CGG + chr7_1:7766146-7766165 None:intergenic 55.0%
CCGCGGGTAAAATCCATCAC+GGG - chr7_1:7764190-7764209 Msa1007930:intron 55.0%
GATATGGGTACCCGTGGGTA+TGG + chr7_1:7766028-7766047 None:intergenic 55.0%
ACCCACGGGTACCCACATAA+TGG - chr7_1:7764800-7764819 Msa1007930:intron 55.0%
CCCATTATGTGGGTACCCGT+GGG + chr7_1:7765535-7765554 None:intergenic 55.0%
CCCACGGGTACCCACATAAT+GGG - chr7_1:7764801-7764820 Msa1007930:intron 55.0%
ACCCATTATGTGGGTACCCG+TGG + chr7_1:7765534-7765553 None:intergenic 55.0%
! ATGGGTACCCATGAGGGTAC+GGG - chr7_1:7764819-7764838 Msa1007930:intron 55.0%
TTTATCCAACGGGACGGGCA+CGG - chr7_1:7764860-7764879 Msa1007930:intron 55.0%
TTTATCCAACGGGACGGGCA+CGG + chr7_1:7764860-7764879 None:intergenic 55.0%
! ATGGGTACCCATGAGGGTAC+GGG + chr7_1:7764819-7764838 None:intergenic 55.0%
ACCCATTATGTGGGTACCCG+TGG - chr7_1:7765534-7765553 Msa1007930:intron 55.0%
CCCACGGGTACCCACATAAT+GGG + chr7_1:7764801-7764820 None:intergenic 55.0%
CCCATTATGTGGGTACCCGT+GGG - chr7_1:7765535-7765554 Msa1007930:intron 55.0%
ACCCACGGGTACCCACATAA+TGG + chr7_1:7764800-7764819 None:intergenic 55.0%
GATATGGGTACCCGTGGGTA+TGG - chr7_1:7766028-7766047 Msa1007930:intron 55.0%
CCGCGGGTAAAATCCATCAC+GGG + chr7_1:7764190-7764209 None:intergenic 55.0%
!!! CCCGTGATGGATTTTACCCG+CGG - chr7_1:7766146-7766165 Msa1007930:intron 55.0%
CCCGCGGGTAAAATCCATCA+CGG + chr7_1:7764189-7764208 None:intergenic 55.0%
!!! CCGTGATGGATTTTACCCGC+GGG - chr7_1:7766147-7766166 Msa1007930:intron 55.0%
! ATTTTACCCGCGGGTACCCA+TGG - chr7_1:7766156-7766175 Msa1007930:intron 55.0%
! TTTTACCCGCGGGTACCCAT+GGG - chr7_1:7766157-7766176 Msa1007930:intron 55.0%
GGCCGTTGTTGACAGATGGT+TGG - chr7_1:7767021-7767040 Msa1007930:intron 55.0%
! GCTGCCAATGGTATTGAGGG+CGG - chr7_1:7767504-7767523 Msa1007930:intron 55.0%
GTCTCCGCCCTCAATACCAT+TGG + chr7_1:7767511-7767530 None:intergenic 55.0%
CCGAGTCCTGTGTTCTAGCA+TGG - chr7_1:7768432-7768451 Msa1007930:CDS 55.0%
! CCTCACAAGTCGGTTTCGTG+GGG + chr7_1:7769722-7769741 None:intergenic 55.0%
! CACCTCACAAGTCGGTTTCG+TGG + chr7_1:7769724-7769743 None:intergenic 55.0%
!! CGAAACCGACTTGTGAGGTG+AGG - chr7_1:7769724-7769743 Msa1007930:intron 55.0%
GTTGATGTAGGGGGTGGAAC+AGG - chr7_1:7770322-7770341 Msa1007930:intron 55.0%
TCGATCTAACCGGGAGCAGG+AGG + chr7_1:7761306-7761325 None:intergenic 60.0%
AAGGTCCGGGGTTCAAACCC+TGG + chr7_1:7761380-7761399 None:intergenic 60.0%
GGCACCAAAGTCTGGGCGAT+AGG - chr7_1:7763735-7763754 Msa1007930:intron 60.0%
CTGGGCGCTAGGCTCTTGTA+CGG - chr7_1:7763777-7763796 Msa1007930:intron 60.0%
TGGGCGCTAGGCTCTTGTAC+GGG - chr7_1:7763778-7763797 Msa1007930:intron 60.0%
GCACGGGGCGGGTAGATAAA+CGG - chr7_1:7764212-7764231 Msa1007930:intron 60.0%
CACGGGGCGGGTAGATAAAC+GGG - chr7_1:7764213-7764232 Msa1007930:intron 60.0%
! TGGGTACCCATGAGGGTACG+GGG - chr7_1:7764820-7764839 Msa1007930:intron 60.0%
TTATCCAACGGGACGGGCAC+GGG - chr7_1:7764861-7764880 Msa1007930:intron 60.0%
TTATCCAACGGGACGGGCAC+GGG + chr7_1:7764861-7764880 None:intergenic 60.0%
! TGGGTACCCATGAGGGTACG+GGG + chr7_1:7764820-7764839 None:intergenic 60.0%
GTAGGATCCGTGCGGTAGCA+CGG - chr7_1:7768711-7768730 Msa1007930:intron 60.0%
TAGGATCCGTGCGGTAGCAC+GGG - chr7_1:7768712-7768731 Msa1007930:intron 60.0%
CAATGACCCGTGCTACCGCA+CGG + chr7_1:7768721-7768740 None:intergenic 60.0%
!! CCCCACGAAACCGACTTGTG+AGG - chr7_1:7769719-7769738 Msa1007930:intron 60.0%
GGTGGCCAGGGTTTGAACCC+CGG - chr7_1:7761372-7761391 Msa1007930:intron 65.0%
GGCGCCTATCGCCCAGACTT+TGG + chr7_1:7763742-7763761 None:intergenic 65.0%
AATCCATCACGGGCACGGGG+CGG - chr7_1:7764200-7764219 Msa1007930:intron 65.0%
! GTACCCATGAGGGTACGGGG+CGG - chr7_1:7764823-7764842 Msa1007930:intron 65.0%
! TACCCATGAGGGTACGGGGC+GGG - chr7_1:7764824-7764843 Msa1007930:intron 65.0%
! TACCCATGAGGGTACGGGGC+GGG + chr7_1:7764824-7764843 None:intergenic 65.0%
! GTACCCATGAGGGTACGGGG+CGG + chr7_1:7764823-7764842 None:intergenic 65.0%
AATCCATCACGGGCACGGGG+CGG + chr7_1:7764200-7764219 None:intergenic 65.0%
CGTGCGGTAGCACGGGTCAT+TGG - chr7_1:7768719-7768738 Msa1007930:intron 65.0%
AATCGGACCGGCCACCGACC+TGG - chr7_1:7760639-7760658 Msa1007930:CDS 70.0%
GACCGGCCACCGACCTGGTA+GGG - chr7_1:7760644-7760663 Msa1007930:CDS 70.0%
CACCCTACCAGGTCGGTGGC+CGG + chr7_1:7760649-7760668 None:intergenic 70.0%
CGAGCACCCTACCAGGTCGG+TGG + chr7_1:7760653-7760672 None:intergenic 70.0%
CCGGGAGCAGGAGGACGAAC+CGG + chr7_1:7761297-7761316 None:intergenic 70.0%
! CCGGTTCGTCCTCCTGCTCC+CGG - chr7_1:7761294-7761313 Msa1007930:intron 70.0%
CCGCGGGTACCCATGGGCAT+GGG + chr7_1:7766163-7766182 None:intergenic 70.0%
CCCATGCCCATGGGTACCCG+CGG - chr7_1:7764173-7764192 Msa1007930:intron 70.0%
CCATGCCCATGGGTACCCGC+GGG - chr7_1:7764174-7764193 Msa1007930:intron 70.0%
ATCCATCACGGGCACGGGGC+GGG - chr7_1:7764201-7764220 Msa1007930:intron 70.0%
TGCCCGCCCCGTACCCTCAT+GGG + chr7_1:7765510-7765529 None:intergenic 70.0%
ATGCCCGCCCCGTACCCTCA+TGG + chr7_1:7765509-7765528 None:intergenic 70.0%
! ATGAGGGTACGGGGCGGGCA+TGG - chr7_1:7764829-7764848 Msa1007930:intron 70.0%
! TGAGGGTACGGGGCGGGCAT+GGG - chr7_1:7764830-7764849 Msa1007930:intron 70.0%
GATACCCGTGCCCGTCCCGT+TGG + chr7_1:7765471-7765490 None:intergenic 70.0%
GATACCCGTGCCCGTCCCGT+TGG - chr7_1:7765471-7765490 Msa1007930:intron 70.0%
! TGAGGGTACGGGGCGGGCAT+GGG + chr7_1:7764830-7764849 None:intergenic 70.0%
! ATGAGGGTACGGGGCGGGCA+TGG + chr7_1:7764829-7764848 None:intergenic 70.0%
ATGCCCGCCCCGTACCCTCA+TGG - chr7_1:7765509-7765528 Msa1007930:intron 70.0%
TGCCCGCCCCGTACCCTCAT+GGG - chr7_1:7765510-7765529 Msa1007930:intron 70.0%
ATCCATCACGGGCACGGGGC+GGG + chr7_1:7764201-7764220 None:intergenic 70.0%
CCATGCCCATGGGTACCCGC+GGG + chr7_1:7764174-7764193 None:intergenic 70.0%
CCCATGCCCATGGGTACCCG+CGG + chr7_1:7764173-7764192 None:intergenic 70.0%
CCGCGGGTACCCATGGGCAT+GGG - chr7_1:7766163-7766182 Msa1007930:intron 70.0%
GGACCGGCCACCGACCTGGT+AGG - chr7_1:7760643-7760662 Msa1007930:CDS 75.0%
CCCGCGGGTACCCATGGGCA+TGG + chr7_1:7766162-7766181 None:intergenic 75.0%
TACCCGCCCCGTGCCCGTGA+TGG + chr7_1:7766133-7766152 None:intergenic 75.0%
TACCCGCCCCGTGCCCGTGA+TGG - chr7_1:7766133-7766152 Msa1007930:intron 75.0%
CCCGCGGGTACCCATGGGCA+TGG - chr7_1:7766162-7766181 Msa1007930:intron 75.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 7759502 7771574 7759502 ID=Msa1007930;Name=Msa1007930
chr7_1 mRNA 7759502 7771574 7759502 ID=Msa1007930-mRNA-1;Parent=Msa1007930;Name=Msa1007930-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0.23|0.07|1|0.46|0.14|14|0|761
chr7_1 exon 7771369 7771574 7771369 ID=Msa1007930-mRNA-1:exon:2331;Parent=Msa1007930-mRNA-1
chr7_1 exon 7771141 7771335 7771141 ID=Msa1007930-mRNA-1:exon:2330;Parent=Msa1007930-mRNA-1
chr7_1 exon 7768555 7768606 7768555 ID=Msa1007930-mRNA-1:exon:2329;Parent=Msa1007930-mRNA-1
chr7_1 exon 7768293 7768521 7768293 ID=Msa1007930-mRNA-1:exon:2328;Parent=Msa1007930-mRNA-1
chr7_1 exon 7768137 7768201 7768137 ID=Msa1007930-mRNA-1:exon:2327;Parent=Msa1007930-mRNA-1
chr7_1 exon 7767818 7768034 7767818 ID=Msa1007930-mRNA-1:exon:2326;Parent=Msa1007930-mRNA-1
chr7_1 exon 7763826 7764040 7763826 ID=Msa1007930-mRNA-1:exon:2325;Parent=Msa1007930-mRNA-1
chr7_1 exon 7763672 7763727 7763672 ID=Msa1007930-mRNA-1:exon:2324;Parent=Msa1007930-mRNA-1
chr7_1 exon 7763488 7763621 7763488 ID=Msa1007930-mRNA-1:exon:2323;Parent=Msa1007930-mRNA-1
chr7_1 exon 7761891 7762125 7761891 ID=Msa1007930-mRNA-1:exon:2322;Parent=Msa1007930-mRNA-1
chr7_1 exon 7761708 7761872 7761708 ID=Msa1007930-mRNA-1:exon:2321;Parent=Msa1007930-mRNA-1
chr7_1 exon 7760899 7760950 7760899 ID=Msa1007930-mRNA-1:exon:2320;Parent=Msa1007930-mRNA-1
chr7_1 exon 7760637 7760865 7760637 ID=Msa1007930-mRNA-1:exon:2319;Parent=Msa1007930-mRNA-1
chr7_1 exon 7759502 7759737 7759502 ID=Msa1007930-mRNA-1:exon:2318;Parent=Msa1007930-mRNA-1
chr7_1 CDS 7771369 7771574 7771369 ID=Msa1007930-mRNA-1:cds;Parent=Msa1007930-mRNA-1
chr7_1 CDS 7771141 7771335 7771141 ID=Msa1007930-mRNA-1:cds;Parent=Msa1007930-mRNA-1
chr7_1 CDS 7768555 7768606 7768555 ID=Msa1007930-mRNA-1:cds;Parent=Msa1007930-mRNA-1
chr7_1 CDS 7768293 7768521 7768293 ID=Msa1007930-mRNA-1:cds;Parent=Msa1007930-mRNA-1
chr7_1 CDS 7768137 7768201 7768137 ID=Msa1007930-mRNA-1:cds;Parent=Msa1007930-mRNA-1
chr7_1 CDS 7767818 7768034 7767818 ID=Msa1007930-mRNA-1:cds;Parent=Msa1007930-mRNA-1
chr7_1 CDS 7763826 7764040 7763826 ID=Msa1007930-mRNA-1:cds;Parent=Msa1007930-mRNA-1
chr7_1 CDS 7763672 7763727 7763672 ID=Msa1007930-mRNA-1:cds;Parent=Msa1007930-mRNA-1
chr7_1 CDS 7763488 7763621 7763488 ID=Msa1007930-mRNA-1:cds;Parent=Msa1007930-mRNA-1
chr7_1 CDS 7761891 7762125 7761891 ID=Msa1007930-mRNA-1:cds;Parent=Msa1007930-mRNA-1
chr7_1 CDS 7761708 7761872 7761708 ID=Msa1007930-mRNA-1:cds;Parent=Msa1007930-mRNA-1
chr7_1 CDS 7760899 7760950 7760899 ID=Msa1007930-mRNA-1:cds;Parent=Msa1007930-mRNA-1
chr7_1 CDS 7760637 7760865 7760637 ID=Msa1007930-mRNA-1:cds;Parent=Msa1007930-mRNA-1
chr7_1 CDS 7759502 7759737 7759502 ID=Msa1007930-mRNA-1:cds;Parent=Msa1007930-mRNA-1
Gene Sequence

>Msa1007930

ATGTCCTATACCAATGAGAAAGAGAATCATGTGGTAGAATCTCCCACCCCACAAATAGATGACAATGATACACTCTCAGCTATGGTACTTGGTGCAAATTTGGTGTTTCCTGCAGTTCTTAACGCTGCAATTGAACTCAATTTATTTGATATCATTGCTAAGGAAAGTAATGGTAGATTCTTGTCATCCTTTGAAATTGCTTCAAAGCTTGATCGTATGCTGCGCTTGCTTGCAAGCTACTCTCTTCTGTCTATTTCTACTCGGACCAATGATGCTGGTAAGATGGTGAGAATTTATGGTATCACACCATCTGGCAAATATTTTGTTAGTAATGAAAATGACCGTGGCTATTTGGGGTCAATGACTTCATATTTGTGTCACCCTGCTTTCTTAGGGGTGTGGTTGAATTTCAAGGATGCAGTTATGGATCCACAGATTGACCTATTCAAGAAAAAAGATCCAAAAATAAACCACATATTTAACAAATCAATGACTGATACATGTACACTACACATGAAAAGAATCCTTGAAATATACAAAGGATATGAGGGAATATCAACACTAGTTGATGCAGGAGGTGGAAATGGACAAAGTCTCAAAGCCATTATATCCAAATATCCATCAATAAAGGCAATCAACTTTGACCTCCCACAAGTGATTGAACATGCACCACCCTATCAAGGGATTGAACATTTTGGAGGAAATATGTTTGAATGTGTTCCACAAGGAGATGCTATAATGCTTAAGCTTGTGTGCCATAATTGGCCGGATGAAAAATGCTTAGAAATTTTAAGCAGTTGTCACAAAGCTTTGCCTCCAAATGGTAAGGTCATTATTGTGGAGTTCTTATCACCAGAAGATCTAGGATCAAAGAATGCATCTAAGATGGTTTCAATTGTGGACAACATCATGTTTATCACAGCTGGTGGTAAGGAAAGAACTCCAAAGGAATATGAGAGTTTAGATGGTTGGAGTGCATTGCGATTATTCTACGAATTTAGTGGAAGTAAGATTATTGCTTTCCAGTACCTTGGTGGAAGTAGATTTCAAATCTTTGTTTTTGCTCATAACATTACACTAGCTGATTATCCACCATATCATTCCATGAGTGCGGCATCATCATGTTATTGTACCTTTGAAGTTCCTATCGTTGGATATGGATCGACGAAATCACCGAAGGAACTACGTGATACTTTTGGCAAATTCCTTAGAGTGAAACATCAAGATTACGTCATACGACCCATACCAAATGTGATGTTCGGAAAAGGTTGGACGAGTTTTTGTGCTGCCAATGGTATTGAGGGCGGAGACGTGTTGATTTTCAAGTGCAAGTGCGTCATGGACAAAAAATATGTTATCGTATCCAAGCAGAATCATGTGTTGAAATCTCACACCCCACAAATAGATGACAATGATACACTCTCTGCTATGGTACTTGGTGCCAATATGGTGTTTCCTGCGGTTCTTAACGCTGCAATTGAACTCAATTTATTTGATATCATTGCTAAGGAAAGTTCACATAATGATGGATTCATGTCATCCTTTGAAATTGCTTCAAAGTTACCAACTCAACACTCTGATTTGCCGAATAGGCTCGATCGTATCTACTCTCTTCTGTCTGTTTCTACTCGGACCAATGATGATGGTAGCATAGTGAGAGTTTATGGGATCACACCATCTGGTAAATATTTTGTCAAGTATGAAAATGGTGATTCTTATTTGGGCTCATTCACATCATTTTTGTCTCACCCTGCTTTGTCAATGGTGTGGTTGAATTTTAAAGAAGCAATTATTGATCCAGAAGGGGACCTGTTCAAAAAAAAAGATCCACAGATAAATGAAATATTTAACAAATCAATGACGGATACATGCACAACTCACATGAAAAGAATCCTTGAAATATACCAAGGATTTGAGGGAATATCAACTTTGGTTGATGTAGGGGGTGGAACAGGACAAAGTCTCAAAATGATTATCTCCAAATACCCATCAATAAAGGCAATTAATTTTGACCTTCCACAAGTAATTGAAAATACACCACCTTGTCCAGCTTTGCCACCAAATGGAAAGCTCATTCTCATAGAGCCCTTGCAACCAGAAGATCTAGAACCAACAAATGTATCTCGATGGCTTTCAATTGCTGATAACATGATGTTTGTCACAGCTGGTGGAATGGAAAGAAGTGTGAAGGAATATGAGAGTTTGGGAAAACGATCTGGATTTTCTACGATTCAAGTTGTTTGTCTTGCTTTCTCTATCATTGGAGTGATGGAACTTTACAAATAA
Protein sequence

>Msa1007930

MSYTNEKENHVVESPTPQIDDNDTLSAMVLGANLVFPAVLNAAIELNLFDIIAKESNGRFLSSFEIASKLDRMLRLLASYSLLSISTRTNDAGKMVRIYGITPSGKYFVSNENDRGYLGSMTSYLCHPAFLGVWLNFKDAVMDPQIDLFKKKDPKINHIFNKSMTDTCTLHMKRILEIYKGYEGISTLVDAGGGNGQSLKAIISKYPSIKAINFDLPQVIEHAPPYQGIEHFGGNMFECVPQGDAIMLKLVCHNWPDEKCLEILSSCHKALPPNGKVIIVEFLSPEDLGSKNASKMVSIVDNIMFITAGGKERTPKEYESLDGWSALRLFYEFSGSKIIAFQYLGGSRFQIFVFAHNITLADYPPYHSMSAASSCYCTFEVPIVGYGSTKSPKELRDTFGKFLRVKHQDYVIRPIPNVMFGKGWTSFCAANGIEGGDVLIFKCKCVMDKKYVIVSKQNHVLKSHTPQIDDNDTLSAMVLGANMVFPAVLNAAIELNLFDIIAKESSHNDGFMSSFEIASKLPTQHSDLPNRLDRIYSLLSVSTRTNDDGSIVRVYGITPSGKYFVKYENGDSYLGSFTSFLSHPALSMVWLNFKEAIIDPEGDLFKKKDPQINEIFNKSMTDTCTTHMKRILEIYQGFEGISTLVDVGGGTGQSLKMIISKYPSIKAINFDLPQVIENTPPCPALPPNGKLILIEPLQPEDLEPTNVSRWLSIADNMMFVTAGGMERSVKEYESLGKRSGFSTIQVVCLAFSIIGVMELYK*