AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0502500

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0502500 MtrunA17_Chr3g0101011 92.789 943 62 3 1 938 1 942 0.0 1749
Msa0502500 MtrunA17_Chr3g0101271 52.360 911 396 17 28 930 7 887 0.0 843
Msa0502500 MtrunA17_Chr3g0101241 52.360 911 396 17 28 930 7 887 0.0 843
Msa0502500 MtrunA17_Chr3g0101201 50.633 948 421 21 1 929 1 920 0.0 832
Msa0502500 MtrunA17_Chr3g0101221 50.419 954 426 21 1 932 1 929 0.0 828
Msa0502500 MtrunA17_Chr3g0101231 49.630 947 440 16 1 929 1 928 0.0 825
Msa0502500 MtrunA17_Chr3g0101321 49.510 919 438 13 14 927 6 903 0.0 820
Msa0502500 MtrunA17_Chr3g0100831 48.568 943 447 19 1 936 1 912 0.0 810
Msa0502500 MtrunA17_Chr3g0112511 50.108 922 427 17 14 929 6 900 0.0 803
Msa0502500 MtrunA17_Chr1g0189351 49.189 925 420 17 1 902 1 898 0.0 801
Msa0502500 MtrunA17_Chr3g0101331 48.541 925 432 17 1 902 1 904 0.0 795
Msa0502500 MtrunA17_Chr3g0101251 49.108 953 390 22 1 929 1 882 0.0 790
Msa0502500 MtrunA17_Chr3g0100961 47.970 936 454 16 1 932 1 907 0.0 790
Msa0502500 MtrunA17_Chr3g0080741 45.705 943 480 15 1 929 1 925 0.0 760
Msa0502500 MtrunA17_Chr3g0094301 46.432 939 477 13 1 929 1 923 0.0 758
Msa0502500 MtrunA17_Chr7g0229761 46.432 939 477 13 1 929 1 923 0.0 758
Msa0502500 MtrunA17_Chr1g0151481 45.455 957 478 18 1 939 1 931 0.0 754
Msa0502500 MtrunA17_Chr3g0101181 48.625 909 422 20 27 911 29 916 0.0 749
Msa0502500 MtrunA17_Chr3g0080771 45.580 939 480 14 1 927 1 920 0.0 745
Msa0502500 MtrunA17_Chr3g0080601 44.883 938 492 12 1 929 1 922 0.0 743
Msa0502500 MtrunA17_Chr3g0080791 45.377 941 479 15 1 927 1 920 0.0 730
Msa0502500 MtrunA17_Chr3g0080751 43.319 958 516 15 1 947 1 942 0.0 722
Msa0502500 MtrunA17_Chr3g0081341 44.105 950 496 14 1 937 66 993 0.0 709
Msa0502500 MtrunA17_Chr3g0100971 51.187 758 339 14 1 752 1 733 0.0 708
Msa0502500 MtrunA17_Chr3g0100801 46.897 838 372 14 14 847 3 771 0.0 696
Msa0502500 MtrunA17_Chr3g0081391 42.994 942 505 14 1 929 1 923 0.0 692
Msa0502500 MtrunA17_Chr3g0080731 42.239 947 521 12 1 938 1 930 0.0 689
Msa0502500 MtrunA17_Chr3g0081191 43.143 948 503 15 1 936 1 924 0.0 687
Msa0502500 MtrunA17_Chr3g0081211 44.043 940 497 13 1 929 1 922 0.0 682
Msa0502500 MtrunA17_Chr3g0081361 41.134 970 536 13 1 954 1 951 0.0 678
Msa0502500 MtrunA17_Chr3g0080631 42.362 923 469 12 17 929 9 878 0.0 676
Msa0502500 MtrunA17_Chr3g0100851 47.208 788 382 13 124 906 6 764 0.0 665
Msa0502500 MtrunA17_Chr3g0100761 48.865 749 320 13 10 752 2 693 0.0 662
Msa0502500 MtrunA17_Chr3g0081371 42.161 944 504 14 1 929 13 929 0.0 658
Msa0502500 MtrunA17_Chr3g0081181 41.870 941 507 14 1 932 1 910 0.0 630
Msa0502500 MtrunA17_Chr3g0080721 45.994 674 347 11 273 938 2 666 0.0 564
Msa0502500 MtrunA17_Chr3g0100681 52.108 593 269 11 200 788 1 582 0.0 555
Msa0502500 MtrunA17_Chr3g0100731 45.962 681 346 12 257 930 1 666 0.0 541
Msa0502500 MtrunA17_Chr5g0410001 35.288 921 556 20 21 927 12 906 7.68e-171 523
Msa0502500 MtrunA17_Chr5g0410031 34.004 944 573 20 1 927 1 911 5.28e-163 503
Msa0502500 MtrunA17_Chr5g0410021 36.047 946 544 19 1 927 1 904 1.73e-162 501
Msa0502500 MtrunA17_Chr5g0409991 35.000 940 560 16 1 927 1 902 4.00e-159 493
Msa0502500 MtrunA17_Chr3g0101391 47.440 586 285 11 330 902 1 576 8.21e-159 480
Msa0502500 MtrunA17_Chr3g0080651 44.304 632 335 9 316 938 222 845 1.60e-155 481
Msa0502500 MtrunA17_Chr3g0080651 39.574 235 132 3 1 235 4 228 8.74e-37 149
Msa0502500 MtrunA17_Chr5g0409971 34.346 955 569 20 1 936 1 916 1.07e-154 481
Msa0502500 MtrunA17_Chr3g0084351 44.876 566 298 9 78 641 1 554 2.30e-150 457
Msa0502500 MtrunA17_Chr3g0101211 51.069 421 182 10 215 629 1 403 6.64e-131 400
Msa0502500 MtrunA17_Chr1g0189271 57.716 324 134 3 177 498 2 324 1.03e-127 389
Msa0502500 MtrunA17_Chr3g0100781 51.053 380 174 7 10 386 2 372 1.00e-119 370
Msa0502500 MtrunA17_Chr5g0404741 28.917 951 606 20 1 927 1 905 1.82e-103 344
Msa0502500 MtrunA17_Chr3g0100701 44.703 472 238 11 466 932 285 738 1.62e-102 337
Msa0502500 MtrunA17_Chr3g0100701 49.660 294 135 3 1 293 1 282 4.35e-77 268
Msa0502500 MtrunA17_Chr1g0149071 37.624 606 216 14 248 849 5 452 7.27e-101 324
Msa0502500 MtrunA17_Chr2g0299001 28.479 927 595 26 34 925 26 919 1.96e-100 336
Msa0502500 MtrunA17_Chr5g0444301 46.916 454 222 10 455 899 1 444 5.03e-98 316
Msa0502500 MtrunA17_Chr3g0100791 44.573 433 227 8 477 906 1 423 2.50e-95 309
Msa0502500 MtrunA17_Chr3g0101361 41.856 485 242 10 476 930 295 769 8.67e-94 314
Msa0502500 MtrunA17_Chr3g0101361 56.376 298 118 7 1 293 1 291 5.11e-90 304
Msa0502500 MtrunA17_Chr4g0037421 29.595 963 563 33 1 897 38 951 2.03e-85 296
Msa0502500 MtrunA17_Chr3g0101421 48.649 296 141 5 1 295 1 286 1.28e-83 271
Msa0502500 MtrunA17_Chr3g0101341 55.109 274 106 5 31 293 1 268 2.52e-81 265
Msa0502500 MtrunA17_Chr7g0219851 27.959 980 605 30 1 927 3 934 4.77e-81 283
Msa0502500 MtrunA17_Chr1g0189281 44.386 383 190 10 525 895 2 373 2.08e-76 255
Msa0502500 MtrunA17_Chr3g0101351 58.403 238 91 4 1 237 5 235 1.25e-75 249
Msa0502500 MtrunA17_Chr1g0197241 27.978 915 563 27 32 902 670 1532 3.73e-74 268
Msa0502500 MtrunA17_Chr8g0352831 28.508 898 536 37 61 898 57 908 2.10e-67 246
Msa0502500 MtrunA17_Chr3g0090141 27.018 892 511 39 60 881 58 879 8.75e-63 232
Msa0502500 MtrunA17_Chr6g0467961 26.894 937 557 37 1 895 1 851 2.66e-61 224
Msa0502500 MtrunA17_Chr3g0085451 29.205 767 455 34 181 901 140 864 1.04e-60 225
Msa0502500 MtrunA17_Chr3g0085561 28.125 800 468 31 153 895 106 855 3.59e-60 223
Msa0502500 MtrunA17_Chr7g0248531 29.369 824 481 32 96 858 57 840 8.50e-60 221
Msa0502500 MtrunA17_Chr1g0189321 49.796 245 110 6 418 655 1 239 1.10e-59 204
Msa0502500 MtrunA17_Chr3g0090651 28.590 752 455 31 181 896 165 870 1.83e-59 221
Msa0502500 MtrunA17_Chr3g0090431 27.152 755 456 30 181 881 37 751 3.36e-59 220
Msa0502500 MtrunA17_Chr3g0087841 26.066 844 486 35 181 949 165 945 4.11e-59 221
Msa0502500 MtrunA17_Chr3g0096971 55.114 176 77 2 276 450 1 175 6.30e-59 199
Msa0502500 MtrunA17_Chr6g0468451 26.183 951 571 37 10 910 2 871 7.34e-58 217
Msa0502500 MtrunA17_Chr3g0090371 27.219 845 472 36 181 948 165 943 7.87e-58 217
Msa0502500 MtrunA17_Chr3g0082101 32.164 513 263 17 206 706 198 637 1.50e-57 214
Msa0502500 MtrunA17_Chr4g0025391 27.509 807 475 32 181 910 156 929 2.58e-57 215
Msa0502500 MtrunA17_Chr3g0090401 27.164 751 441 33 181 881 376 1070 5.17e-57 215
Msa0502500 MtrunA17_Chr3g0091061 28.476 748 461 28 181 896 165 870 6.11e-57 214
Msa0502500 MtrunA17_Chr3g0091081 28.366 765 465 30 181 899 165 892 9.38e-57 214
Msa0502500 MtrunA17_Chr8g0352861 27.926 752 452 28 203 903 198 910 1.13e-56 213
Msa0502500 MtrunA17_Chr3g0089651 28.468 829 473 43 181 943 169 943 1.25e-56 213
Msa0502500 MtrunA17_Chr5g0431051 27.479 968 555 40 11 918 3 883 1.43e-56 212
Msa0502500 MtrunA17_Chr5g0430721 25.657 951 588 34 11 915 44 921 1.84e-56 212
Msa0502500 MtrunA17_Chr1g0155321 26.105 950 581 36 11 915 3 876 3.96e-56 211
Msa0502500 MtrunA17_Chr3g0092241 27.968 758 447 34 181 881 165 880 4.38e-56 211
Msa0502500 MtrunA17_Chr3g0085331 27.617 793 475 33 153 895 137 880 5.60e-56 211
Msa0502500 MtrunA17_Chr2g0316291 25.998 927 584 37 32 904 28 906 1.15e-55 210
Msa0502500 MtrunA17_Chr1g0164611 30.682 528 303 18 206 706 198 689 1.41e-55 209
Msa0502500 MtrunA17_Chr3g0082131 27.838 916 509 41 59 894 53 896 2.53e-55 209
Msa0502500 MtrunA17_Chr5g0415471 25.296 929 598 33 11 899 3 875 7.07e-55 207
Msa0502500 MtrunA17_Chr1g0164391 27.795 662 371 21 59 673 54 655 1.03e-54 207
Msa0502500 MtrunA17_Chr6g0468121 26.361 937 559 37 1 896 1 847 1.21e-54 207
Msa0502500 MtrunA17_Chr3g0086181 28.590 780 464 31 181 913 150 883 1.99e-54 204
Msa0502500 MtrunA17_Chr5g0430621 26.791 963 551 37 11 910 3 874 2.06e-54 205
Msa0502500 MtrunA17_Chr2g0309721 26.218 862 505 38 59 856 55 849 2.18e-54 206
Msa0502500 MtrunA17_Chr3g0082311 27.702 657 377 19 59 673 54 654 2.65e-54 206
Msa0502500 MtrunA17_Chr3g0089991 28.261 690 400 28 181 821 169 812 5.12e-54 205
Msa0502500 MtrunA17_Chr1g0197201 26.928 843 515 28 130 906 541 1348 5.43e-54 205
Msa0502500 MtrunA17_Chr3g0092261 26.139 922 521 41 38 881 85 924 1.22e-53 204
Msa0502500 MtrunA17_Chr3g0084361 46.250 240 128 1 688 927 1 239 1.36e-53 187
Msa0502500 MtrunA17_Chr3g0089761 27.145 781 443 35 181 892 165 888 1.57e-53 204
Msa0502500 MtrunA17_Chr3g0089811 26.413 973 540 46 59 943 55 939 1.59e-53 204
Msa0502500 MtrunA17_Chr3g0082791 28.645 775 457 34 184 913 171 894 2.17e-53 202
Msa0502500 MtrunA17_Chr3g0087701 28.087 826 456 34 181 922 152 923 2.53e-53 202
Msa0502500 MtrunA17_Chr3g0086151 28.841 690 403 27 181 826 150 795 3.75e-53 201
Msa0502500 MtrunA17_Chr3g0086161 28.215 762 465 27 181 897 150 874 3.79e-53 202
Msa0502500 MtrunA17_Chr6g0470081 26.190 924 563 35 11 886 3 855 4.07e-53 202
Msa0502500 MtrunA17_Chr3g0090691 28.133 750 460 29 181 896 165 869 4.63e-53 202
Msa0502500 MtrunA17_Chr3g0089961 26.959 753 460 32 183 881 167 883 4.88e-53 201
Msa0502500 MtrunA17_Chr3g0089911 28.669 586 336 21 128 673 108 651 5.00e-53 197
Msa0502500 MtrunA17_Chr6g0468021 26.401 928 546 35 11 885 3 846 5.05e-53 202
Msa0502500 MtrunA17_Chr3g0089211 27.632 760 446 32 181 881 212 926 6.43e-53 202
Msa0502500 MtrunA17_Chr3g0089501 27.064 739 425 30 181 856 163 850 6.48e-53 200
Msa0502500 MtrunA17_Chr5g0429961 26.096 958 576 38 11 918 3 878 7.07e-53 201
Msa0502500 MtrunA17_Chr3g0100721 50.000 220 101 4 16 234 8 219 7.42e-53 184
Msa0502500 MtrunA17_Chr3g0089421 25.352 923 550 39 75 899 41 922 8.49e-53 201
Msa0502500 MtrunA17_Chr3g0089781 27.540 817 451 33 181 908 165 929 1.00e-52 200
Msa0502500 MtrunA17_Chr2g0299091 26.841 842 509 31 129 914 102 892 1.06e-52 200
Msa0502500 MtrunA17_Chr3g0082391 26.106 678 423 21 27 673 25 655 1.82e-52 197
Msa0502500 MtrunA17_Chr3g0086221 27.427 886 541 36 37 881 33 857 2.14e-52 200
Msa0502500 MtrunA17_Chr3g0089541 26.848 771 464 34 181 895 169 895 2.24e-52 200
Msa0502500 MtrunA17_Chr3g0085501 27.330 794 473 30 153 895 137 877 2.79e-52 199
Msa0502500 MtrunA17_Chr6g0470011 28.496 758 449 33 175 886 145 855 3.13e-52 199
Msa0502500 MtrunA17_Chr6g0470021 28.287 753 447 31 175 881 36 741 4.31e-52 197
Msa0502500 MtrunA17_Chr3g0089601 27.064 739 425 30 181 856 163 850 4.87e-52 197
Msa0502500 MtrunA17_Chr5g0414311 24.026 924 592 34 19 889 11 877 5.03e-52 199
Msa0502500 MtrunA17_Chr3g0089871 26.750 800 439 33 181 899 157 890 6.00e-52 199
Msa0502500 MtrunA17_Chr5g0446611 28.802 743 405 34 207 895 196 868 6.34e-52 197
Msa0502500 MtrunA17_Chr3g0081841 48.113 212 105 3 177 387 2 209 7.25e-52 190
Msa0502500 MtrunA17_Chr3g0081841 45.522 134 71 2 473 606 212 343 1.45e-25 111
Msa0502500 MtrunA17_Chr3g0081841 43.564 101 56 1 726 826 384 483 2.58e-15 80.1
Msa0502500 MtrunA17_Chr4g0051651 26.597 673 419 22 19 651 33 670 2.11e-51 192
Msa0502500 MtrunA17_Chr3g0085651 27.880 764 457 29 181 884 159 888 2.13e-51 197
Msa0502500 MtrunA17_Chr4g0027251 26.495 970 567 35 11 918 3 888 2.31e-51 196
Msa0502500 MtrunA17_Chr5g0430511 26.715 962 567 39 11 915 3 883 3.14e-51 196
Msa0502500 MtrunA17_Chr3g0089251 26.510 811 471 34 181 910 194 960 3.56e-51 196
Msa0502500 MtrunA17_Chr5g0430141 26.002 973 573 35 11 921 3 890 3.60e-51 195
Msa0502500 MtrunA17_Chr3g0087541 27.815 755 466 28 181 893 168 885 4.41e-51 196
Msa0502500 MtrunA17_Chr3g0084051 28.828 725 422 30 181 861 168 842 4.59e-51 196
Msa0502500 MtrunA17_Chr7g0248221 27.504 669 420 25 27 673 23 648 4.94e-51 194
Msa0502500 MtrunA17_Chr8g0346831 24.239 953 594 31 32 900 28 936 6.31e-51 194
Msa0502500 MtrunA17_Chr3g0089591 29.921 508 320 18 181 673 170 656 7.24e-51 195
Msa0502500 MtrunA17_Chr3g0100911 47.660 235 114 4 644 875 2 230 8.24e-51 178
Msa0502500 MtrunA17_Chr1g0164631 27.179 677 396 21 59 679 54 689 2.51e-50 192
Msa0502500 MtrunA17_Chr3g0085801 26.795 780 464 28 159 897 145 858 3.71e-50 192
Msa0502500 MtrunA17_Chr8g0348931 26.456 790 475 29 181 895 164 922 6.26e-50 192
Msa0502500 MtrunA17_Chr3g0113791 26.692 783 492 28 176 914 145 889 6.85e-50 192
Msa0502500 MtrunA17_Chr7g0257541 23.810 903 542 29 34 895 32 829 8.39e-50 190
Msa0502500 MtrunA17_Chr2g0282991 26.082 832 490 33 27 803 26 787 8.64e-50 192
Msa0502500 MtrunA17_Chr3g0082811 25.789 729 450 27 112 802 96 771 8.66e-50 189
Msa0502500 MtrunA17_Chr7g0221481 28.356 663 399 22 181 800 154 783 1.09e-49 190
Msa0502500 MtrunA17_Chr1g0189551 27.356 658 414 24 34 673 58 669 1.61e-49 189
Msa0502500 MtrunA17_Chr3g0084031 27.119 767 483 33 181 910 170 897 1.61e-49 191
Msa0502500 MtrunA17_Chr5g0430291 25.181 965 578 33 11 915 3 883 1.74e-49 190
Msa0502500 MtrunA17_Chr1g0147141 26.515 792 470 29 116 858 124 852 1.77e-49 190
Msa0502500 MtrunA17_Chr6g0467911 26.431 821 511 31 11 800 3 761 1.83e-49 188
Msa0502500 MtrunA17_Chr3g0087731 29.508 610 371 24 219 802 2 578 2.28e-49 189
Msa0502500 MtrunA17_Chr3g0087581 28.253 807 477 36 181 922 153 922 2.79e-49 190
Msa0502500 MtrunA17_Chr2g0299151 27.001 837 507 30 133 909 104 896 3.17e-49 190
Msa0502500 MtrunA17_Chr3g0082351 25.888 676 424 21 27 673 25 652 4.49e-49 189
Msa0502500 MtrunA17_Chr5g0430581 26.316 969 556 40 11 918 3 874 5.35e-49 188
Msa0502500 MtrunA17_Chr5g0414201 25.433 924 559 37 19 885 11 861 6.46e-49 188
Msa0502500 MtrunA17_Chr6g0468271 26.014 888 551 31 10 860 2 820 8.87e-49 188
Msa0502500 MtrunA17_Chr5g0430641 25.681 954 593 38 8 918 1 881 1.32e-48 187
Msa0502500 MtrunA17_Chr3g0089471 27.006 648 391 26 59 673 55 653 1.43e-48 188
Msa0502500 MtrunA17_Chr1g0164581 29.216 753 454 32 190 894 151 872 1.71e-48 187
Msa0502500 MtrunA17_Chr5g0429951 25.773 970 566 35 11 915 3 883 1.80e-48 187
Msa0502500 MtrunA17_Chr2g0299101 27.755 717 425 26 129 803 128 793 2.17e-48 186
Msa0502500 MtrunA17_Chr7g0244231 26.528 965 556 41 11 915 3 874 2.40e-48 186
Msa0502500 MtrunA17_Chr3g0086091 29.590 757 437 35 219 913 2 724 3.52e-48 186
Msa0502500 MtrunA17_Chr3g0085471 27.020 755 470 28 181 896 168 880 7.62e-48 186
Msa0502500 MtrunA17_Chr3g0123111 25.321 936 582 35 11 913 3 854 1.08e-47 185
Msa0502500 MtrunA17_Chr5g0433771 26.783 799 498 32 27 793 23 766 1.13e-47 184
Msa0502500 MtrunA17_Chr3g0084081 28.275 771 473 31 181 913 168 896 1.29e-47 185
Msa0502500 MtrunA17_Chr3g0084971 26.179 806 454 33 59 803 55 780 1.52e-47 185
Msa0502500 MtrunA17_Chr2g0299121 26.154 845 511 30 129 914 128 918 2.57e-47 183
Msa0502500 MtrunA17_Chr3g0082871 26.293 696 418 29 45 701 19 658 4.86e-47 180
Msa0502500 MtrunA17_Chr1g0155991 25.263 950 581 33 11 910 3 873 5.31e-47 182
Msa0502500 MtrunA17_Chr1g0169901 25.591 930 564 37 27 896 26 887 8.41e-47 182
Msa0502500 MtrunA17_Chr5g0414181 24.473 997 602 37 11 949 3 906 1.15e-46 181
Msa0502500 MtrunA17_Chr3g0113481 28.043 649 398 23 176 791 145 757 1.45e-46 179
Msa0502500 MtrunA17_Chr3g0086621 27.320 776 471 30 181 896 150 892 1.94e-46 181
Msa0502500 MtrunA17_Chr6g0468101 25.295 933 548 37 11 913 3 816 3.28e-46 180
Msa0502500 MtrunA17_Chr5g0430441 25.965 959 585 38 11 921 3 884 3.96e-46 179
Msa0502500 MtrunA17_Chr7g0257201 23.562 904 552 32 34 899 30 832 7.99e-46 178
Msa0502500 MtrunA17_Chr3g0082881 26.524 607 374 22 175 752 150 713 1.54e-45 177
Msa0502500 MtrunA17_Chr4g0020501 26.047 645 384 20 59 682 10 582 1.55e-45 177
Msa0502500 MtrunA17_Chr4g0009781 28.502 614 372 21 175 754 151 731 1.94e-45 177
Msa0502500 MtrunA17_Chr6g0471941 23.444 964 586 34 32 902 28 932 2.06e-45 177
Msa0502500 MtrunA17_Chr4g0010201 27.512 607 382 20 175 752 151 728 3.76e-45 177
Msa0502500 MtrunA17_Chr6g0475491 26.466 665 420 22 32 673 28 646 4.57e-45 175
Msa0502500 MtrunA17_Chr8g0338621 25.490 663 423 24 32 673 28 640 4.66e-45 173
Msa0502500 MtrunA17_Chr8g0338671 27.778 522 323 18 175 673 39 529 1.47e-44 171
Msa0502500 MtrunA17_Chr3g0083621 26.378 762 450 26 209 892 187 915 2.01e-44 175
Msa0502500 MtrunA17_Chr4g0008461 28.014 564 319 16 183 683 128 667 2.46e-44 174
Msa0502500 MtrunA17_Chr8g0337891 24.511 665 431 24 32 674 28 643 3.52e-44 172
Msa0502500 MtrunA17_Chr4g0010261 28.226 620 377 21 175 761 151 735 5.35e-44 173
Msa0502500 MtrunA17_Chr3g0085931 27.249 756 459 33 175 886 145 853 8.54e-44 172
Msa0502500 MtrunA17_Chr8g0338391 24.066 723 479 26 32 728 28 706 1.47e-43 171
Msa0502500 MtrunA17_Chr3g0091041 31.831 355 202 14 181 527 165 487 2.49e-43 166
Msa0502500 MtrunA17_Chr6g0468151 24.718 886 551 34 21 860 13 828 3.49e-43 171
Msa0502500 MtrunA17_Chr3g0085551 27.536 759 467 33 181 896 42 760 4.22e-43 169
Msa0502500 MtrunA17_Chr3g0101401 48.128 187 92 3 93 277 1 184 6.19e-43 154
Msa0502500 MtrunA17_Chr3g0078361 28.541 466 272 14 215 644 1 441 1.95e-42 161
Msa0502500 MtrunA17_Chr7g0257221 23.894 904 555 33 27 895 23 828 3.91e-42 166
Msa0502500 MtrunA17_Chr8g0344071 29.518 498 299 14 184 664 446 908 5.82e-42 167
Msa0502500 MtrunA17_Chr6g0456131 24.726 914 562 32 64 911 49 902 6.19e-42 166
Msa0502500 MtrunA17_Chr6g0468331 25.825 697 424 27 11 659 3 654 7.62e-42 164
Msa0502500 MtrunA17_Chr3g0083751 27.194 581 362 16 209 754 181 735 7.79e-42 166
Msa0502500 MtrunA17_Chr5g0430951 25.383 784 483 31 11 762 3 716 2.20e-41 164
Msa0502500 MtrunA17_Chr6g0484551 25.298 755 441 34 181 881 167 852 2.39e-41 164
Msa0502500 MtrunA17_Chr6g0468341 28.427 496 314 15 11 501 3 462 5.79e-41 163
Msa0502500 MtrunA17_Chr1g0159111 25.714 770 472 33 174 885 138 865 7.52e-41 162
Msa0502500 MtrunA17_Chr1g0169951 26.152 673 423 25 39 674 28 663 9.69e-41 161
Msa0502500 MtrunA17_Chr7g0257191 22.907 908 560 32 27 895 23 829 1.53e-40 161
Msa0502500 MtrunA17_Chr8g0338261 25.155 644 414 23 32 653 28 625 1.87e-40 161
Msa0502500 MtrunA17_Chr3g0089431 31.746 315 182 10 181 482 169 463 2.30e-40 155
Msa0502500 MtrunA17_Chr4g0010221 28.243 609 378 23 175 754 151 729 2.94e-40 161
Msa0502500 MtrunA17_Chr3g0082891 26.296 521 325 17 175 673 150 633 3.03e-40 160
Msa0502500 MtrunA17_Chr3g0083721 25.945 767 469 33 184 892 120 845 4.46e-40 160
Msa0502500 MtrunA17_Chr3g0113781 26.177 722 454 27 234 914 1 684 6.63e-40 159
Msa0502500 MtrunA17_Chr8g0355411 23.095 853 545 25 19 828 17 801 1.22e-39 158
Msa0502500 MtrunA17_Chr8g0338361 24.696 494 338 17 172 652 17 489 1.88e-39 154
Msa0502500 MtrunA17_Chr3g0081201 42.308 208 118 2 723 929 2 208 2.32e-39 145
Msa0502500 MtrunA17_Chr7g0218941 23.404 940 586 31 32 895 28 909 3.12e-39 157
Msa0502500 MtrunA17_Chr3g0089931 26.899 487 281 17 59 525 55 486 3.72e-39 153
Msa0502500 MtrunA17_Chr7g0248431 26.445 571 359 21 27 577 23 552 5.35e-39 154
Msa0502500 MtrunA17_Chr3g0086741 26.164 730 461 27 174 858 170 866 5.99e-39 156
Msa0502500 MtrunA17_Chr8g0338251 24.454 732 462 26 32 743 28 688 1.61e-38 154
Msa0502500 MtrunA17_Chr5g0415551 26.872 681 418 21 181 822 27 666 5.94e-38 152
Msa0502500 MtrunA17_Chr5g0414231 24.858 527 351 14 11 525 3 496 9.39e-38 149
Msa0502500 MtrunA17_Chr4g0010251 28.444 559 340 21 220 752 200 724 1.04e-37 153
Msa0502500 MtrunA17_Chr3g0085131 25.441 794 464 28 181 910 150 879 1.42e-37 153
Msa0502500 MtrunA17_Chr3g0085091 27.078 794 468 36 181 913 153 896 1.45e-37 153
Msa0502500 MtrunA17_Chr4g0048471 25.236 741 442 30 209 885 48 740 5.38e-37 150
Msa0502500 MtrunA17_Chr3g0080701 42.718 206 115 3 21 224 13 217 9.06e-37 139
Msa0502500 MtrunA17_Chr3g0085521 23.934 915 590 37 42 913 34 885 1.60e-36 149
Msa0502500 MtrunA17_Chr8g0356251 25.066 758 451 25 209 882 202 926 1.76e-36 149
Msa0502500 MtrunA17_Chr3g0085111 26.308 688 386 27 180 802 148 779 1.84e-36 149
Msa0502500 MtrunA17_Chr6g0456121 24.931 726 457 29 182 867 150 827 2.94e-36 148
Msa0502500 MtrunA17_Chr3g0085161 24.485 776 463 26 177 881 24 747 4.98e-36 147
Msa0502500 MtrunA17_Chr3g0084811 25.277 811 475 26 159 894 302 1056 1.76e-35 146
Msa0502500 MtrunA17_Chr3g0091011 26.087 690 409 27 181 826 151 783 1.83e-35 145
Msa0502500 MtrunA17_Chr5g0417301 24.189 678 395 20 11 669 3 580 2.38e-35 142
Msa0502500 MtrunA17_Chr3g0085751 24.778 900 566 39 51 901 40 877 3.15e-35 145
Msa0502500 MtrunA17_Chr4g0048421 23.902 774 491 30 168 885 124 855 3.73e-35 144
Msa0502500 MtrunA17_Chr3g0080871 23.985 788 474 27 183 890 156 898 1.93e-34 143
Msa0502500 MtrunA17_Chr5g0415511 24.907 538 346 16 173 701 154 642 2.19e-34 141
Msa0502500 MtrunA17_Chr3g0084061 26.132 773 490 29 183 910 160 896 9.88e-34 140
Msa0502500 MtrunA17_Chr5g0430331 27.061 473 285 14 11 469 3 429 2.08e-33 134
Msa0502500 MtrunA17_Chr8g0351821 26.875 480 297 17 10 477 2 439 2.41e-33 135
Msa0502500 MtrunA17_Chr4g0071021 24.949 493 293 15 11 486 3 435 2.50e-33 134
Msa0502500 MtrunA17_Chr3g0083591 26.724 580 342 22 194 720 144 693 9.61e-33 137
Msa0502500 MtrunA17_Chr6g0478721 24.559 737 445 28 209 885 91 776 1.05e-32 136
Msa0502500 MtrunA17_Chr3g0091971 25.493 659 386 21 146 766 113 704 1.06e-32 137
Msa0502500 MtrunA17_Chr1g0168901 27.027 555 322 18 183 693 142 657 6.76e-32 134
Msa0502500 MtrunA17_Chr7g0257551 27.928 333 213 8 180 493 86 410 9.68e-32 129
Msa0502500 MtrunA17_Chr5g0430901 29.095 409 238 14 11 404 3 374 2.29e-31 132
Msa0502500 MtrunA17_Chr3g0101171 58.511 94 39 0 444 537 5 98 2.51e-31 118
Msa0502500 MtrunA17_Chr1g0197181 27.184 515 305 18 446 902 3 505 7.83e-31 128
Msa0502500 MtrunA17_Chr1g0160871 41.026 156 80 2 650 798 1 151 1.30e-30 118
Msa0502500 MtrunA17_Chr3g0107181 28.157 483 302 20 209 673 157 612 2.83e-30 129
Msa0502500 MtrunA17_Chr8g0352211 23.654 947 600 32 34 900 1030 1933 1.13e-29 128
Msa0502500 MtrunA17_Chr2g0309151 27.828 442 281 18 273 701 39 455 1.14e-29 124
Msa0502500 MtrunA17_Chr2g0299141 27.294 425 258 13 320 717 13 413 6.43e-29 120
Msa0502500 MtrunA17_Chr3g0100841 58.242 91 37 1 16 105 8 98 6.73e-29 111
Msa0502500 MtrunA17_Chr1g0189301 44.928 138 69 3 75 212 3 133 1.02e-28 112
Msa0502500 MtrunA17_Chr5g0413811 25.395 697 457 26 241 916 1 655 1.16e-28 123
Msa0502500 MtrunA17_Chr3g0101161 41.117 197 102 4 738 930 3 189 1.79e-28 113
Msa0502500 MtrunA17_Chr4g0010491 31.987 297 168 9 175 460 151 424 2.46e-28 119
Msa0502500 MtrunA17_Chr7g0248411 27.515 338 207 13 80 401 5 320 3.71e-28 116
Msa0502500 MtrunA17_Chr3g0082321 28.571 357 202 8 343 673 271 600 7.65e-28 121
Msa0502500 MtrunA17_Chr5g0410161 25.120 836 471 37 130 885 255 1015 7.96e-28 121
Msa0502500 MtrunA17_Chr8g0360991 27.447 521 324 18 205 701 169 659 1.87e-27 120
Msa0502500 MtrunA17_Chr5g0414291 25.799 407 261 14 43 430 28 412 2.08e-27 116
Msa0502500 MtrunA17_Chr6g0469991 33.613 238 140 9 172 402 142 368 1.69e-26 112
Msa0502500 MtrunA17_Chr5g0417251 24.118 680 448 26 271 918 14 657 1.73e-26 116
Msa0502500 MtrunA17_Chr3g0085701 33.117 308 178 10 181 478 150 439 2.98e-26 116
Msa0502500 MtrunA17_Chr2g0308491 31.818 264 160 9 202 460 10 258 3.20e-26 108
Msa0502500 MtrunA17_Chr8g0355071 28.777 278 176 7 231 501 29 291 3.95e-26 110
Msa0502500 MtrunA17_Chr3g0083681 25.617 527 322 19 181 679 149 633 8.78e-26 115
Msa0502500 MtrunA17_Chr3g0096821 27.168 519 325 23 177 673 136 623 1.28e-25 114
Msa0502500 MtrunA17_Chr3g0083641 25.090 558 312 18 181 680 147 656 3.03e-25 113
Msa0502500 MtrunA17_Chr7g0229721 26.518 494 324 19 194 673 154 622 4.90e-25 112
Msa0502500 MtrunA17_Chr5g0415491 30.493 223 139 7 171 387 9 221 3.94e-24 102
Msa0502500 MtrunA17_Chr5g0410401 25.143 700 409 30 183 827 17 656 6.78e-24 108
Msa0502500 MtrunA17_Chr2g0299131 31.739 230 136 6 183 402 2 220 7.63e-24 100
Msa0502500 MtrunA17_Chr3g0085171 24.273 791 486 29 183 910 138 878 8.82e-24 108
Msa0502500 MtrunA17_Chr7g0229751 25.646 503 333 18 187 673 97 574 9.85e-24 108
Msa0502500 MtrunA17_Chr3g0086071 28.402 507 292 23 431 884 11 499 2.59e-23 106
Msa0502500 MtrunA17_Chr3g0087301 26.073 303 182 11 173 448 154 441 4.49e-23 106
Msa0502500 MtrunA17_Chr6g0468111 26.419 511 266 19 180 674 51 467 4.98e-23 104
Msa0502500 MtrunA17_Chr1g0189261 49.495 99 42 1 1 99 1 91 9.65e-23 93.6
Msa0502500 MtrunA17_Chr3g0096721 26.223 511 335 21 177 673 140 622 2.71e-22 103
Msa0502500 MtrunA17_Chr3g0105571 26.400 500 315 22 193 671 105 572 3.95e-22 102
Msa0502500 MtrunA17_Chr5g0443761 25.444 507 289 20 214 676 38 499 1.08e-21 102
Msa0502500 MtrunA17_Chr8g0338861 24.620 658 397 27 321 900 7 643 1.93e-21 100
Msa0502500 MtrunA17_Chr3g0085431 26.476 559 321 25 387 913 2 502 1.95e-21 99.4
Msa0502500 MtrunA17_Chr3g0108811 25.787 508 322 18 190 673 163 639 5.14e-21 100
Msa0502500 MtrunA17_Chr3g0091961 24.940 417 253 11 342 721 4 397 6.92e-21 96.3
Msa0502500 MtrunA17_Chr1g0189311 56.250 80 34 1 215 293 1 80 8.75e-21 87.4
Msa0502500 MtrunA17_Chr5g0410481 25.391 512 268 21 270 721 200 657 8.98e-21 99.0
Msa0502500 MtrunA17_Chr5g0410301 25.097 777 446 34 183 885 139 853 1.76e-20 97.8
Msa0502500 MtrunA17_Chr2g0282981 31.188 202 124 5 207 404 193 383 2.19e-20 95.1
Msa0502500 MtrunA17_Chr5g0410351 25.427 468 284 18 378 803 324 768 3.08e-20 97.1
Msa0502500 MtrunA17_Chr8g0338681 29.902 204 133 4 289 489 44 240 3.35e-20 91.3
Msa0502500 MtrunA17_Chr1g0197191 29.921 254 160 7 160 409 93 332 4.27e-20 92.8
Msa0502500 MtrunA17_Chr6g0468401 25.449 334 210 11 10 335 2 304 4.40e-20 92.8
Msa0502500 MtrunA17_Chr6g0468201 24.754 509 311 18 435 910 4 473 5.90e-20 95.5
Msa0502500 MtrunA17_Chr6g0470001 25.866 491 295 19 434 886 3 462 2.03e-19 94.0
Msa0502500 MtrunA17_Chr3g0108821 26.119 536 341 21 190 704 151 652 2.46e-19 94.4
Msa0502500 MtrunA17_Chr3g0085721 28.016 257 168 6 154 404 112 357 2.52e-19 91.3
Msa0502500 MtrunA17_Chr7g0255111 25.686 510 317 23 191 673 159 633 4.68e-19 93.6
Msa0502500 MtrunA17_Chr3g0107211 25.933 509 317 24 194 673 156 633 6.84e-19 92.8
Msa0502500 MtrunA17_Chr3g0105521 26.226 469 294 19 214 664 57 491 6.98e-19 92.8
Msa0502500 MtrunA17_Chr6g0468141 30.213 235 128 7 181 411 55 257 7.76e-19 87.8
Msa0502500 MtrunA17_Chr3g0107931 24.800 500 303 20 209 673 191 652 8.04e-19 92.8
Msa0502500 MtrunA17_Chr7g0223931 25.364 481 311 17 215 673 1 455 1.67e-18 90.9
Msa0502500 MtrunA17_Chr3g0100261 25.049 515 336 20 209 701 173 659 2.02e-18 91.3
Msa0502500 MtrunA17_Chr5g0410261 24.499 698 398 32 179 803 153 794 2.03e-18 91.3
Msa0502500 MtrunA17_Chr3g0082381 24.847 326 193 13 42 351 43 332 2.07e-18 87.8
Msa0502500 MtrunA17_Chr7g0255401 23.564 679 412 25 210 821 118 756 3.20e-18 90.9
Msa0502500 MtrunA17_Chr1g0169941 28.085 235 155 6 273 502 31 256 3.37e-18 87.4
Msa0502500 MtrunA17_Chr2g0282891 24.818 411 205 15 319 687 9 357 3.52e-18 87.4
Msa0502500 MtrunA17_Chr8g0392521 29.592 196 122 7 181 367 131 319 3.62e-18 87.0
Msa0502500 MtrunA17_Chr8g0374301 25.265 661 424 28 186 823 172 785 4.83e-18 89.7
Msa0502500 MtrunA17_Chr5g0416571 24.926 337 183 11 11 333 3 283 4.91e-18 86.7
Msa0502500 MtrunA17_Chr3g0091121 24.821 419 253 19 418 802 8 398 7.48e-18 89.0
Msa0502500 MtrunA17_Chr1g0189331 44.444 108 55 2 697 800 3 109 1.42e-17 79.3
Msa0502500 MtrunA17_Chr3g0105551 25.662 491 316 19 193 664 151 611 1.76e-17 88.6
Msa0502500 MtrunA17_Chr3g0091851 24.250 400 263 14 292 673 186 563 4.11e-17 87.0
Msa0502500 MtrunA17_Chr7g0221071 24.603 504 316 20 209 687 96 560 1.13e-16 84.7
Msa0502500 MtrunA17_Chr1g0189511 28.013 307 156 11 375 673 6 255 1.57e-16 80.9
Msa0502500 MtrunA17_Chr5g0402771 23.234 736 442 34 183 895 158 793 1.79e-16 84.7
Msa0502500 MtrunA17_Chr5g0439121 23.909 481 315 18 205 673 169 610 1.93e-16 85.1
Msa0502500 MtrunA17_Chr3g0082371 26.480 321 175 13 395 672 1 303 6.49e-16 81.6
Msa0502500 MtrunA17_Chr5g0402671 25.135 370 226 17 183 535 160 495 8.23e-16 82.4
Msa0502500 MtrunA17_Chr3g0108211 26.498 317 206 10 215 524 1 297 8.82e-16 80.9
Msa0502500 MtrunA17_Chr6g0468361 23.673 452 297 16 435 860 4 433 1.08e-15 80.9
Msa0502500 MtrunA17_Chr3g0099591 22.531 648 394 24 205 780 170 781 1.16e-15 82.4
Msa0502500 MtrunA17_Chr1g0167981 22.803 478 321 15 210 673 176 619 1.37e-15 82.4
Msa0502500 MtrunA17_Chr5g0444291 42.857 91 30 3 299 368 8 97 1.61e-15 73.2
Msa0502500 MtrunA17_Chr3g0101411 43.023 86 41 1 1 86 1 78 2.25e-15 72.0
Msa0502500 MtrunA17_Chr1g0189341 51.899 79 36 1 818 896 1 77 3.29e-15 73.2
Msa0502500 MtrunA17_Chr2g0313491 23.289 760 440 34 188 887 149 825 3.48e-15 80.9
Msa0502500 MtrunA17_Chr3g0099571 24.270 548 318 21 198 701 161 655 4.12e-15 80.5
Msa0502500 MtrunA17_Chr1g0174511 22.476 525 353 17 210 706 175 673 5.48e-15 80.1
Msa0502500 MtrunA17_Chr7g0221171 23.477 673 442 31 149 789 165 796 6.00e-15 79.7
Msa0502500 MtrunA17_Chr5g0414911 26.523 509 304 23 193 673 163 629 7.35e-15 79.7
Msa0502500 MtrunA17_Chr3g0108171 24.449 499 337 19 194 673 173 650 9.03e-15 79.7
Msa0502500 MtrunA17_Chr8g0374561 23.607 682 412 32 186 823 157 773 1.15e-14 78.6
Msa0502500 MtrunA17_Chr3g0097631 25.316 395 259 17 215 597 1 371 1.42e-14 77.0
Msa0502500 MtrunA17_Chr3g0108061 23.395 483 306 23 215 665 1 451 1.43e-14 78.2
Msa0502500 MtrunA17_Chr5g0402721 23.577 369 244 14 176 535 144 483 3.44e-14 77.0
Msa0502500 MtrunA17_Chr3g0108791 24.946 461 305 18 215 657 1 438 3.53e-14 76.3
Msa0502500 MtrunA17_Chr3g0100981 35.556 135 85 1 793 927 3 135 3.83e-14 70.5
Msa0502500 MtrunA17_Chr3g0100771 35.556 135 85 1 793 927 3 135 3.83e-14 70.5
Msa0502500 MtrunA17_Chr1g0163791 22.391 527 351 18 210 706 175 673 4.71e-14 77.0
Msa0502500 MtrunA17_Chr1g0153981 26.599 297 178 10 187 472 184 451 6.25e-14 76.3
Msa0502500 MtrunA17_Chr2g0313591 22.846 766 434 33 191 878 154 840 8.70e-14 76.3
Msa0502500 MtrunA17_Chr3g0085421 27.742 155 96 5 186 333 97 242 9.82e-14 72.4
Msa0502500 MtrunA17_Chr7g0257251 29.518 166 95 4 348 502 10 164 1.00e-13 70.5
Msa0502500 MtrunA17_Chr3g0105621 26.667 345 212 15 194 525 106 422 1.82e-13 74.3
Msa0502500 MtrunA17_Chr5g0414171 29.949 197 129 4 303 499 210 397 2.05e-13 73.6
Msa0502500 MtrunA17_Chr3g0100691 37.313 134 82 1 793 926 3 134 2.17e-13 68.2
Msa0502500 MtrunA17_Chr3g0091861 23.600 500 321 23 209 680 109 575 2.69e-13 74.7
Msa0502500 MtrunA17_Chr3g0105481 26.364 330 204 14 209 525 119 422 2.70e-13 74.7
Msa0502500 MtrunA17_Chr7g0220981 28.912 294 179 14 205 488 51 324 4.45e-13 72.8
Msa0502500 MtrunA17_Chr2g0299841 27.083 336 201 12 169 488 216 523 6.51e-13 73.2
Msa0502500 MtrunA17_Chr6g0474801 27.762 353 197 15 186 525 196 503 7.49e-13 72.8
Msa0502500 MtrunA17_Chr6g0478771 29.268 287 176 11 170 451 171 435 9.49e-13 72.8
Msa0502500 MtrunA17_Chr7g0255681 29.719 249 148 8 209 451 213 440 1.07e-12 72.8
Msa0502500 MtrunA17_Chr8g0374471 25.278 360 235 14 178 525 134 471 1.32e-12 72.0
Msa0502500 MtrunA17_Chr6g0468191 23.715 253 154 8 1 247 1 220 1.63e-12 68.9
Msa0502500 MtrunA17_Chr3g0081941 22.300 426 258 14 3 420 2 362 9.18e-12 69.7
Msa0502500 MtrunA17_Chr8g0374511 23.885 381 245 15 129 488 50 406 1.52e-11 68.6
Msa0502500 MtrunA17_Chr4g0009241 30.303 330 185 20 141 456 683 981 1.85e-11 68.6
Msa0502500 MtrunA17_Chr8g0351811 26.415 318 195 13 618 910 92 395 2.52e-11 67.8
Msa0502500 MtrunA17_Chr4g0009171 28.669 293 166 15 141 418 141 405 2.89e-11 68.2
Msa0502500 MtrunA17_Chr5g0430341 28.097 331 186 13 617 918 118 425 4.57e-11 66.6
Msa0502500 MtrunA17_Chr5g0403291 25.926 243 155 11 183 421 34 255 4.79e-11 66.6
Msa0502500 MtrunA17_Chr8g0353001 25.053 471 277 21 206 660 212 622 5.66e-11 67.0
Msa0502500 MtrunA17_Chr2g0298291 29.391 279 161 12 185 456 193 442 5.93e-11 67.0
Msa0502500 MtrunA17_Chr3g0107621 27.548 363 217 17 193 537 154 488 8.54e-11 65.9
Msa0502500 MtrunA17_Chr4g0020411 36.937 111 66 2 345 455 43 149 9.81e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0502500 AT3G07040.1 29.533 921 597 18 21 917 13 905 3.36e-129 414
Msa0502500 AT1G58400.3 26.557 915 598 27 1 888 1 868 2.22e-76 270
Msa0502500 AT1G58400.2 26.557 915 598 27 1 888 1 868 2.22e-76 270
Msa0502500 AT5G43470.3 25.756 959 630 24 1 931 1 905 2.03e-75 266
Msa0502500 AT5G43470.2 25.756 959 630 24 1 931 1 905 2.03e-75 266
Msa0502500 AT5G43470.4 25.756 959 630 24 1 931 1 905 2.03e-75 266
Msa0502500 AT5G43470.1 25.756 959 630 24 1 931 1 905 2.03e-75 266
Msa0502500 AT1G58390.1 27.056 924 564 31 12 888 4 864 3.43e-75 266
Msa0502500 AT1G58390.2 27.056 924 564 31 12 888 4 864 3.43e-75 266
Msa0502500 AT5G35450.2 25.708 953 619 30 1 927 1 890 7.81e-74 262
Msa0502500 AT5G35450.1 25.708 953 619 30 1 927 1 890 7.81e-74 262
Msa0502500 AT3G46710.1 29.465 879 529 31 25 877 17 830 1.03e-72 258
Msa0502500 AT5G48620.6 25.367 954 640 25 1 931 1 905 5.86e-72 257
Msa0502500 AT5G48620.1 25.367 954 640 25 1 931 1 905 5.86e-72 257
Msa0502500 AT5G48620.4 25.367 954 640 25 1 931 1 905 5.86e-72 257
Msa0502500 AT5G48620.2 25.367 954 640 25 1 931 1 905 5.86e-72 257
Msa0502500 AT5G48620.3 25.367 954 640 25 1 931 1 905 5.86e-72 257
Msa0502500 AT5G48620.5 25.367 954 640 25 1 931 1 905 5.86e-72 257
Msa0502500 AT3G46530.1 28.253 853 543 26 25 870 17 807 5.48e-71 253
Msa0502500 AT3G46730.1 28.635 901 537 29 1 873 1 823 1.84e-70 251
Msa0502500 AT1G58400.1 25.792 915 595 27 1 888 1 858 1.96e-70 252
Msa0502500 AT1G50180.1 30.482 643 380 21 34 652 26 625 2.46e-70 251
Msa0502500 AT1G59780.2 25.079 953 614 31 1 927 1 879 9.40e-70 250
Msa0502500 AT1G59780.1 25.079 953 614 31 1 927 6 884 1.51e-69 250
Msa0502500 AT1G53350.1 25.311 964 626 32 1 931 1 903 6.92e-69 248
Msa0502500 AT1G58410.1 26.498 951 607 33 12 927 2 895 8.96e-69 248
Msa0502500 AT1G58410.4 26.498 951 607 33 12 927 2 895 8.96e-69 248
Msa0502500 AT1G58410.2 26.498 951 607 33 12 927 2 895 8.96e-69 248
Msa0502500 AT1G59218.1 25.914 930 567 32 12 885 4 867 4.94e-68 247
Msa0502500 AT1G59218.2 25.914 930 567 32 12 885 4 867 4.94e-68 247
Msa0502500 AT1G59218.3 25.914 930 567 32 12 885 4 867 4.94e-68 247
Msa0502500 AT1G58848.1 25.914 930 567 32 12 885 4 867 4.94e-68 247
Msa0502500 AT1G58848.2 25.914 930 567 32 12 885 4 867 4.94e-68 247
Msa0502500 AT1G59124.1 25.501 898 573 30 12 870 4 844 3.19e-63 231
Msa0502500 AT1G58807.2 25.501 898 573 30 12 870 4 844 3.19e-63 231
Msa0502500 AT1G59124.2 25.301 913 586 30 12 885 4 859 3.40e-63 233
Msa0502500 AT1G58807.1 25.301 913 586 30 12 885 4 859 3.40e-63 233
Msa0502500 AT1G59620.2 25.864 781 496 22 173 927 14 737 8.15e-63 228
Msa0502500 AT1G58602.2 24.810 919 589 29 12 885 4 865 4.57e-61 227
Msa0502500 AT1G58602.1 24.810 919 589 29 12 885 4 865 4.57e-61 227
Msa0502500 AT1G10920.1 27.762 724 464 24 150 843 4 698 9.96e-59 215
Msa0502500 AT1G10920.2 27.762 724 464 24 150 843 4 698 9.96e-59 215
Msa0502500 AT1G10920.4 27.762 724 464 24 150 843 4 698 9.96e-59 215
Msa0502500 AT3G50950.2 26.036 772 498 26 11 761 3 722 6.28e-57 212
Msa0502500 AT3G50950.1 26.036 772 498 26 11 761 3 722 6.28e-57 212
Msa0502500 AT1G58410.3 24.947 946 596 33 12 927 2 863 1.14e-55 208
Msa0502500 AT3G14470.1 26.758 654 402 24 181 780 167 797 5.53e-46 180
Msa0502500 AT3G14470.2 26.758 654 402 24 181 780 167 797 5.53e-46 180
Msa0502500 AT3G14460.1 27.405 551 340 20 175 701 157 671 3.44e-40 162
Msa0502500 AT4G26090.1 24.227 776 480 28 145 901 118 804 3.88e-35 145
Msa0502500 AT1G10920.5 26.364 550 354 20 323 843 1 528 1.10e-34 140
Msa0502500 AT1G10920.3 26.364 550 354 20 323 843 1 528 1.10e-34 140
Msa0502500 AT1G12220.3 26.476 559 345 22 155 673 8 540 8.07e-33 137
Msa0502500 AT1G12210.1 26.326 528 335 18 183 686 154 651 1.31e-32 137
Msa0502500 AT1G12210.3 26.145 524 341 16 183 686 112 609 1.32e-32 137
Msa0502500 AT1G12210.2 26.145 524 341 16 183 686 112 609 1.32e-32 137
Msa0502500 AT1G12220.1 26.476 559 345 22 155 673 129 661 1.50e-32 137
Msa0502500 AT1G12220.2 26.476 559 345 22 155 673 129 661 1.50e-32 137
Msa0502500 AT1G12280.1 26.604 530 307 21 169 673 143 615 4.06e-32 135
Msa0502500 AT5G47250.1 27.273 539 330 23 204 729 173 662 1.65e-29 127
Msa0502500 AT1G15890.2 30.655 336 197 15 204 527 11 322 7.34e-29 124
Msa0502500 AT1G15890.1 30.655 336 197 15 204 527 171 482 8.63e-29 124
Msa0502500 AT4G27220.2 26.096 502 297 22 210 678 145 605 8.87e-29 124
Msa0502500 AT4G27220.1 26.096 502 297 22 210 678 137 597 9.63e-29 124
Msa0502500 AT1G51480.1 25.306 735 446 30 205 892 171 849 1.42e-28 124
Msa0502500 AT4G10780.2 25.610 492 307 17 210 673 176 636 3.95e-28 122
Msa0502500 AT4G10780.1 25.610 492 307 17 210 673 176 636 4.92e-28 122
Msa0502500 AT5G63020.1 25.852 499 329 19 191 673 159 632 1.08e-27 121
Msa0502500 AT5G05400.1 22.818 951 591 38 6 910 7 860 2.64e-27 120
Msa0502500 AT1G61180.1 25.304 494 313 19 186 655 153 614 1.65e-26 117
Msa0502500 AT5G43730.4 26.006 646 390 28 205 805 170 772 1.95e-26 117
Msa0502500 AT5G43730.1 26.006 646 390 28 205 805 170 772 1.95e-26 117
Msa0502500 AT5G43730.3 26.006 646 390 28 205 805 170 772 1.95e-26 117
Msa0502500 AT5G43730.2 26.006 646 390 28 205 805 170 772 1.95e-26 117
Msa0502500 AT5G43730.5 26.006 646 390 28 205 805 170 772 1.95e-26 117
Msa0502500 AT1G61180.2 25.403 496 310 20 186 655 153 614 2.22e-26 117
Msa0502500 AT5G43740.1 25.840 476 302 17 205 657 169 616 2.50e-26 117
Msa0502500 AT5G43740.2 25.840 476 302 17 205 657 169 616 2.50e-26 117
Msa0502500 AT1G63350.4 24.247 730 444 29 183 885 150 797 4.96e-26 115
Msa0502500 AT5G05400.2 24.426 610 379 24 209 780 8 573 4.98e-26 115
Msa0502500 AT5G05400.3 24.426 610 379 24 209 780 8 573 4.98e-26 115
Msa0502500 AT4G27190.1 25.217 575 345 22 198 725 150 686 2.75e-25 113
Msa0502500 AT1G63350.1 23.537 752 458 28 183 885 150 833 4.63e-25 112
Msa0502500 AT1G63350.3 23.537 752 458 28 183 885 150 833 5.21e-25 112
Msa0502500 AT1G63350.2 23.537 752 458 28 183 885 150 833 5.21e-25 112
Msa0502500 AT1G61190.2 25.358 489 316 18 186 652 154 615 8.86e-25 112
Msa0502500 AT1G61190.3 25.358 489 316 18 186 652 154 615 8.86e-25 112
Msa0502500 AT1G61190.1 25.205 488 316 17 187 652 155 615 1.80e-24 111
Msa0502500 AT1G12290.1 25.877 456 277 19 209 634 177 601 4.96e-24 109
Msa0502500 AT1G12290.4 25.877 456 277 19 209 634 135 559 4.97e-24 109
Msa0502500 AT1G12290.3 25.877 456 277 19 209 634 135 559 4.97e-24 109
Msa0502500 AT1G12290.2 25.877 456 277 19 209 634 135 559 4.97e-24 109
Msa0502500 AT1G61310.1 24.646 495 326 17 186 655 155 627 6.34e-24 109
Msa0502500 AT5G47260.1 23.453 695 467 23 210 885 172 820 1.13e-23 108
Msa0502500 AT1G61300.1 23.890 766 477 31 168 901 21 712 5.15e-23 105
Msa0502500 AT1G61190.4 28.080 349 226 14 186 527 154 484 8.67e-22 102
Msa0502500 AT1G12280.2 24.764 529 285 22 169 673 105 544 1.71e-21 101
Msa0502500 AT1G61300.2 27.500 320 212 11 168 480 21 327 6.08e-21 99.4
Msa0502500 AT1G62630.1 24.704 506 322 20 237 726 203 665 1.67e-16 85.1
Msa0502500 AT5G66910.1 23.872 687 409 29 146 768 136 772 4.41e-15 80.5
Msa0502500 AT1G27170.2 22.999 787 479 32 170 888 174 901 9.29e-15 79.7
Msa0502500 AT1G27170.1 22.999 787 479 32 170 888 174 901 1.10e-14 79.7
Msa0502500 AT5G66900.1 23.592 657 390 32 186 802 168 752 6.41e-13 73.6
Msa0502500 AT5G66900.2 23.592 657 390 32 186 802 216 800 7.16e-13 73.6
Msa0502500 AT5G51630.5 24.573 761 461 35 184 894 119 816 2.60e-12 71.6
Msa0502500 AT5G51630.1 24.573 761 461 35 184 894 183 880 2.95e-12 71.6
Msa0502500 AT5G51630.2 24.573 761 461 35 184 894 119 816 3.01e-12 71.6
Msa0502500 AT5G51630.4 24.573 761 461 35 184 894 119 816 3.24e-12 71.6
Msa0502500 AT5G51630.6 24.573 761 461 35 184 894 119 816 3.24e-12 71.6
Msa0502500 AT1G27180.2 22.624 747 468 32 186 895 200 873 3.31e-12 71.6
Msa0502500 AT1G27180.1 22.624 747 468 32 186 895 362 1035 3.58e-12 71.6
Msa0502500 AT1G27180.3 22.520 746 470 31 186 895 200 873 4.30e-12 70.9
Msa0502500 AT1G27180.5 22.624 747 468 32 186 895 198 871 4.64e-12 70.9
Msa0502500 AT1G27180.8 22.624 747 468 32 186 895 198 871 4.64e-12 70.9
Msa0502500 AT1G27180.7 22.624 747 468 32 186 895 24 697 6.83e-12 70.5
Msa0502500 AT1G27180.6 22.624 747 468 32 186 895 24 697 6.83e-12 70.5
Msa0502500 AT1G27180.4 22.624 747 468 32 186 895 24 697 6.83e-12 70.5
Msa0502500 AT5G66900.3 24.578 415 260 19 186 589 216 588 1.15e-11 69.3
Msa0502500 AT5G45490.2 26.275 255 137 9 188 393 63 315 7.14e-11 65.5
Msa0502500 AT5G45490.1 26.275 255 137 9 188 393 63 315 7.14e-11 65.5

Find 175 sgRNAs with CRISPR-Local

Find 221 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCATGTCTGCAACTTCTTT+TGG 0.153822 3_4:-44854038 None:intergenic
CAAGTGTTGCATCTCATTTA+TGG 0.193324 3_4:-44856157 None:intergenic
CCATTTGCTTCCACTATTAA+AGG 0.206014 3_4:+44853989 Msa0502500:CDS
ATCCTTATTTCAAAGTAAAA+AGG 0.228067 3_4:-44857194 Msa0502510:intron
CTTTGTTATAACATGTATAC+TGG 0.252568 3_4:-44855209 None:intergenic
TGAAGCTTGTTAATCTCTTT+TGG 0.253017 3_4:-44855913 None:intergenic
AAGTGTGGAATGAGCAATTT+TGG 0.264501 3_4:+44854831 Msa0502500:CDS
AAACAATGCTTCTTATACTT+TGG 0.280402 3_4:+44855271 Msa0502500:CDS
GATGCTAAGGCATAACAAAT+TGG 0.289449 3_4:-44856388 None:intergenic
TTATACTTTGGAATATTTCC+TGG 0.296718 3_4:+44855283 Msa0502500:CDS
ATACAAGAACCAACCTTCTA+TGG 0.302290 3_4:-44855423 None:intergenic
CCACTTGCAATTGTGGCTAT+TGG 0.302749 3_4:+44855103 Msa0502500:CDS
AATTTGAAATCCATCAAAAT+TGG 0.306306 3_4:+44856498 Msa0502500:CDS
TGAGCTTCTCCAATGTAAAA+TGG 0.306456 3_4:-44854464 None:intergenic
CAACTGATGGAGGTGCCTTC+TGG 0.310571 3_4:+44856570 Msa0502500:CDS
TCAAAGCAGACACTGAAATA+TGG 0.315956 3_4:-44857024 Msa0502510:three_prime_UTR
AGTTGGAGAGGTTTCCATAT+TGG 0.319580 3_4:+44856280 Msa0502500:CDS
CATAGTTTGCCTTATATCTA+AGG 0.330264 3_4:-44855878 None:intergenic
AATGATCCTTGATAAAATTC+AGG 0.330564 3_4:+44855504 Msa0502500:CDS
TGGGACACCTCTTATCATAT+TGG 0.334670 3_4:-44854018 None:intergenic
CTCTCTAAGGTTGTTCAATA+TGG 0.335617 3_4:-44854438 None:intergenic
ACGTCTAAAGGTGTTGGATA+TGG 0.337399 3_4:+44855964 Msa0502500:CDS
CTTCAGAAGCTTCGCCTTGT+AGG 0.338023 3_4:+44856255 Msa0502500:CDS
TTGATGTGAATATCTTTCTT+TGG 0.339725 3_4:-44855140 None:intergenic
GCTAGAAGTTGTCATGTTCA+TGG 0.344809 3_4:+44855469 Msa0502500:CDS
TGAAGCTCTCTAATCCAATA+TGG 0.344879 3_4:-44856294 None:intergenic
GCACTTCGCGTAGCGTTTGT+AGG 0.344898 3_4:-44856023 None:intergenic
AAATTAAGCAATTCTTTCCT+TGG 0.345487 3_4:-44854506 None:intergenic
ACCTAGAGACCTTAGATATA+AGG 0.348322 3_4:+44855869 Msa0502500:CDS
TCCTTGGGAAATTTCTGAAA+TGG 0.350391 3_4:+44854739 Msa0502500:CDS
TGTAAAATGGAGCCTCTCTA+AGG 0.359289 3_4:-44854451 None:intergenic
AAGCATTGTTTGAGATTGTA+AGG 0.360695 3_4:-44855259 None:intergenic
AGATCTTTCAATGATTTCAA+TGG 0.369339 3_4:-44856363 None:intergenic
CTTAATGTCCTGAATCTTGT+AGG 0.369715 3_4:-44854309 None:intergenic
ATTGCTTAATTTGTTGATAG+AGG 0.371939 3_4:+44854517 Msa0502500:CDS
GTTTAAGAGTCTTAAGAAAC+TGG 0.372742 3_4:+44856458 Msa0502500:CDS
GTCTTAAGAAACTGGTATTT+AGG 0.373748 3_4:+44856466 Msa0502500:CDS
GTAGAGAAGGTTCCATTTGT+AGG 0.377320 3_4:+44856693 Msa0502500:CDS
AAGGCATTATTTGACTTGAA+TGG 0.378155 3_4:+44855019 Msa0502500:CDS
ACAAATAGCCTACAAGATTC+AGG 0.380865 3_4:+44854301 Msa0502500:CDS
GTGTCAAAGATGATTTGATT+TGG 0.384640 3_4:-44854382 None:intergenic
TAACAGAGTTGATCCATAGA+AGG 0.384686 3_4:+44855410 Msa0502500:CDS
CTCACTGTCGTCTCGGTGGT+TGG 0.386689 3_4:+44854551 Msa0502500:CDS
AATACTTTGATTGTCATGTA+TGG 0.388807 3_4:+44854636 Msa0502500:CDS
TTAACAAGCTTCAAAAGTTA+AGG 0.399812 3_4:+44855923 Msa0502500:CDS
TTTAGTAATTTGAACTTTGA+AGG 0.401879 3_4:-44855712 None:intergenic
TAAAGCTTAAATATCTCAAA+TGG 0.402586 3_4:-44855798 None:intergenic
AATTAAGCAATTCTTTCCTT+GGG 0.403844 3_4:-44854505 None:intergenic
AAGAAAGATATTCACATCAA+TGG 0.404967 3_4:+44855143 Msa0502500:CDS
GTCTCGGTGGTTGGGATGGG+AGG 0.407262 3_4:+44854560 Msa0502500:CDS
AAACAGGAGAAGCTCTTCCT+TGG 0.409283 3_4:+44854723 Msa0502500:CDS
TGTCGTCTCGGTGGTTGGGA+TGG 0.411155 3_4:+44854556 Msa0502500:CDS
CTTAGATATAAGGCAAACTA+TGG 0.412827 3_4:+44855879 Msa0502500:CDS
CAAAACATTTACAAACAAAC+AGG 0.413674 3_4:+44854707 Msa0502500:CDS
ATCAGTTGCTTCCGTTAGCT+CGG 0.416517 3_4:+44853964 Msa0502500:CDS
AGGAATCTCCCAGGATCTAT+TGG 0.420832 3_4:+44855835 Msa0502500:CDS
TGAAAATTTGAGTTCAGAGT+TGG 0.422036 3_4:+44855177 Msa0502500:CDS
GTGTTAACTTCATAGTTTCC+AGG 0.428758 3_4:-44855301 None:intergenic
GTCGTCTCGGTGGTTGGGAT+GGG 0.429896 3_4:+44854557 Msa0502500:CDS
CGGTCAACTATTCCTACAAA+TGG 0.438093 3_4:-44856705 Msa0502510:three_prime_UTR
AGAAAGATATTCACATCAAT+GGG 0.439189 3_4:+44855144 Msa0502500:CDS
CGTATTGTCTTCTTCAGCTT+CGG 0.442090 3_4:-44854111 None:intergenic
TCACTGTCGTCTCGGTGGTT+GGG 0.443056 3_4:+44854552 Msa0502500:CDS
ATACTTGCCACAAAGGAATC+TGG 0.446537 3_4:-44855688 None:intergenic
TATTTGTAGACAAAGAATCT+TGG 0.449647 3_4:-44854285 None:intergenic
GGACAACAGCCTCATGATCC+TGG 0.455968 3_4:+44854221 Msa0502500:CDS
ATATGACAAACTTTAAGCCT+TGG 0.456112 3_4:-44856606 None:intergenic
TGAAGCTTACCAATAGATCC+TGG 0.456188 3_4:-44855844 None:intergenic
ATGCTAAGGCATAACAAATT+GGG 0.457914 3_4:-44856387 None:intergenic
TAGACGTATCATAAGCTAGA+AGG 0.458014 3_4:-44855948 None:intergenic
GCCTTATATCTAAGGTCTCT+AGG 0.458019 3_4:-44855870 None:intergenic
GCTTTAGAAATACAAAAGTA+AGG 0.462582 3_4:+44855815 Msa0502500:CDS
CTTGCAATTGTGGCTATTGG+TGG 0.463248 3_4:+44855106 Msa0502500:CDS
CCATTGTTTAATTAGTCTCA+TGG 0.469394 3_4:-44855323 None:intergenic
TTGGTTACTTCCTTTAATAG+TGG 0.473358 3_4:-44853999 None:intergenic
TGGAACTGGTTGATATTGTT+AGG 0.473849 3_4:-44855594 None:intergenic
TTCAGAAGCTTCGCCTTGTA+GGG 0.474788 3_4:+44856256 Msa0502500:CDS
GCTTCGCCTTGTAGGGAAGT+TGG 0.475787 3_4:+44856263 Msa0502500:CDS
CGCGAAGTGCAAGCAGATCA+TGG 0.478864 3_4:+44856036 Msa0502500:CDS
GGGTTTGTCAAAGAGGAAAC+AGG 0.478902 3_4:+44855355 Msa0502500:CDS
ATTGGAGAAGCTCAAGTTGT+GGG 0.481313 3_4:+44854473 Msa0502500:CDS
GGAAGTAAAGCTGCACATCC+AGG 0.482828 3_4:-44854239 None:intergenic
CATGAGACTAATTAAACAAT+GGG 0.485807 3_4:+44855324 Msa0502500:CDS
ATGTTGAATGCTCAAACATT+CGG 0.495358 3_4:+44855635 Msa0502500:CDS
CAACTTTACTCACGATAATG+AGG 0.495717 3_4:+44855540 Msa0502500:CDS
ATTTGATTTGGAGGAATCCA+TGG 0.496505 3_4:-44854370 None:intergenic
AACAGGAGAAGCTCTTCCTT+GGG 0.498834 3_4:+44854724 Msa0502500:CDS
GGGTCTGCCACTTGCAATTG+TGG 0.500271 3_4:+44855096 Msa0502500:CDS
CACTTCGCGTAGCGTTTGTA+GGG 0.504714 3_4:-44856022 None:intergenic
CAAAGCATTGATCGTGTTCG+AGG 0.505738 3_4:+44856654 Msa0502500:CDS
CAATGGATCATGAGTTAACA+TGG 0.508670 3_4:-44856346 None:intergenic
GTTAGTGCAATGGATGATAC+TGG 0.513053 3_4:+44854338 Msa0502500:CDS
TTAGTAATTTGAACTTTGAA+GGG 0.513206 3_4:-44855711 None:intergenic
CTAGCTTATGATACGTCTAA+AGG 0.516007 3_4:+44855952 Msa0502500:CDS
GAAGTAACCAATATGATAAG+AGG 0.516962 3_4:+44854011 Msa0502500:CDS
AGTTAATATTCCACAACTGA+TGG 0.517152 3_4:+44856557 Msa0502500:CDS
TTTGAATACATAGGAACTCA+TGG 0.517228 3_4:+44856956 Msa0502500:intron
CATCAACAATGCAGATAGAA+TGG 0.517305 3_4:+44854088 Msa0502500:CDS
TGACAGTAAAGTGTTGGAAC+TGG 0.517587 3_4:-44855608 None:intergenic
TCAGTTGCTTCCGTTAGCTC+GGG 0.519761 3_4:+44853965 Msa0502500:CDS
ATTTCTTGACAGTAAAGTGT+TGG 0.520160 3_4:-44855614 None:intergenic
GAGTAAAGTTGCAAAAGCTT+AGG 0.521988 3_4:-44855528 None:intergenic
ATCCTCTTTCGTGCATATGA+AGG 0.522049 3_4:+44856408 Msa0502500:CDS
TTGCTTAATTTGTTGATAGA+GGG 0.522124 3_4:+44854518 Msa0502500:CDS
TCAAAGATGATTTGATTTGG+AGG 0.522967 3_4:-44854379 None:intergenic
CATAAATGAGATGCAACACT+TGG 0.524738 3_4:+44856158 Msa0502500:CDS
TATGATACGTCTAAAGGTGT+TGG 0.525034 3_4:+44855958 Msa0502500:CDS
CACCTTCATATGCACGAAAG+AGG 0.525402 3_4:-44856410 None:intergenic
GTGTTCGAGGAAAACATCAA+TGG 0.528573 3_4:+44856667 Msa0502500:CDS
CTTCTTGAGCCTCTCAAGAT+CGG 0.529292 3_4:-44856076 None:intergenic
CCTTTAATAGTGGAAGCAAA+TGG 0.531188 3_4:-44853989 None:intergenic
AGCAAATGGTCCCGAGCTAA+CGG 0.531567 3_4:-44853975 None:intergenic
ACCTCTCCAACTTCCCTACA+AGG 0.531933 3_4:-44856269 None:intergenic
ATGTTGCCATGTCTTGTAAG+AGG 0.533413 3_4:+44854924 Msa0502500:CDS
ATATGAGACCTTTGAACAGA+TGG 0.534092 3_4:+44857072 Msa0502500:CDS
GATATTCACATCAATGGGAA+AGG 0.537602 3_4:+44855149 Msa0502500:CDS
CTGGTGTCTACAACTTGCCA+AGG 0.541868 3_4:+44856589 Msa0502500:CDS
GTGGTTGGGATGGGAGGGCA+AGG 0.542027 3_4:+44854566 Msa0502500:CDS
TCATCAAGCTTAGGACTGAC+TGG 0.542547 3_4:-44855564 None:intergenic
GTGTCTCGACACACAGTTGA+AGG 0.544739 3_4:+44854665 Msa0502500:CDS
GATACTCCTTGCGAAACAAA+AGG 0.546460 3_4:+44854789 Msa0502500:CDS
CGAAGACCTCTTACAAGACA+TGG 0.548697 3_4:-44854930 None:intergenic
AGGCGAAGCTTCTGAAGTCT+AGG 0.549442 3_4:-44856249 None:intergenic
ATTAAACAATGGGTAGCGGA+AGG 0.551653 3_4:+44855334 Msa0502500:CDS
GATAATTCAGATTCTCCTTG+TGG 0.554005 3_4:+44856980 Msa0502500:CDS
GCCTTGTAGGGAAGTTGGAG+AGG 0.559278 3_4:+44856268 Msa0502500:CDS
TTGAATACATAGGAACTCAT+GGG 0.563152 3_4:+44856957 Msa0502500:intron
TGAATCACCCATCTGTTCAA+AGG 0.567547 3_4:-44857080 Msa0502510:three_prime_UTR
ATTCAACTGAATGATGGCAT+TGG 0.569887 3_4:+44855988 Msa0502500:CDS
CCATGAGACTAATTAAACAA+TGG 0.570977 3_4:+44855323 Msa0502500:CDS
AGAAGAGCTCACTGTCGTCT+CGG 0.572777 3_4:+44854544 Msa0502500:CDS
TCTCGGTGGTTGGGATGGGA+GGG 0.573284 3_4:+44854561 Msa0502500:CDS
ATGCACGAAAGAGGATGCTA+AGG 0.574037 3_4:-44856401 None:intergenic
AGAGTTGATCCATAGAAGGT+TGG 0.574110 3_4:+44855414 Msa0502500:CDS
ACTAATTAAACAATGGGTAG+CGG 0.575636 3_4:+44855330 Msa0502500:CDS
CATTGGAGAAGCTCAAGTTG+TGG 0.576741 3_4:+44854472 Msa0502500:CDS
GGCGACGAGTCATCAAGCTT+AGG 0.577276 3_4:-44855573 None:intergenic
AGAGTTACCAGATTCCTTTG+TGG 0.581326 3_4:+44855681 Msa0502500:CDS
TATGGAATTCAACTGAATGA+TGG 0.582946 3_4:+44855982 Msa0502500:CDS
AGCGGAAGGGTTTGTCAAAG+AGG 0.584072 3_4:+44855348 Msa0502500:CDS
TGAAGGGATACTTGCCACAA+AGG 0.584673 3_4:-44855695 None:intergenic
TTTGTTATAACATGTATACT+GGG 0.585017 3_4:-44855208 None:intergenic
ACATCAATGGATCGTAGAGA+AGG 0.585300 3_4:+44856680 Msa0502500:CDS
GAAGGCACCTCCATCAGTTG+TGG 0.586524 3_4:-44856567 None:intergenic
AGCTGATTACCGATCTTGAG+AGG 0.592354 3_4:+44856067 Msa0502500:CDS
GAAGCTTACCAATAGATCCT+GGG 0.593572 3_4:-44855843 None:intergenic
TCCATTTCAGAAATTTCCCA+AGG 0.594292 3_4:-44854740 None:intergenic
GGAATGTCATCATTGTTGAA+AGG 0.595311 3_4:-44857003 Msa0502510:three_prime_UTR
ATCATTGTTGAAAGGCCACA+AGG 0.600912 3_4:-44856995 Msa0502510:three_prime_UTR
ACACAGTTGAAGGGTTGCTG+AGG 0.603934 3_4:+44854675 Msa0502500:CDS
TTAAACAATGGGTAGCGGAA+GGG 0.604090 3_4:+44855335 Msa0502500:CDS
AAGCAACTGATCGCAAGCAA+AGG 0.607201 3_4:-44853952 None:intergenic
GAAGAAGACAATACGCGCGA+CGG 0.608675 3_4:+44854119 Msa0502500:CDS
TAAGTCACTAGTTAGTGCAA+TGG 0.609987 3_4:+44854328 Msa0502500:CDS
GGCAAGTTGTAGACACCAGA+AGG 0.611578 3_4:-44856585 None:intergenic
TCATCTTGTTTGATGAAGTG+TGG 0.611872 3_4:+44854816 Msa0502500:CDS
TATGAGACCTTTGAACAGAT+GGG 0.614748 3_4:+44857073 Msa0502500:CDS
CACAGTTGAAGGGTTGCTGA+GGG 0.622714 3_4:+44854676 Msa0502500:CDS
CCAATAGCCACAATTGCAAG+TGG 0.625052 3_4:-44855103 None:intergenic
TTGTGGGATTCGAAGACCCA+AGG 0.633042 3_4:+44854489 Msa0502500:CDS
TAATATTCCACAACTGATGG+AGG 0.634381 3_4:+44856560 Msa0502500:CDS
GCTGCACATCCAGGATCATG+AGG 0.642394 3_4:-44854230 None:intergenic
TAACTTGAACTTCTCTAGAG+AGG 0.643111 3_4:-44856535 None:intergenic
TGTCTCGACACACAGTTGAA+GGG 0.648547 3_4:+44854666 Msa0502500:CDS
ACAAAAGTAAGGAATCTCCC+AGG 0.649056 3_4:+44855826 Msa0502500:CDS
AGAGCTCACTGTCGTCTCGG+TGG 0.655409 3_4:+44854547 Msa0502500:CDS
CATATTGAACAACCTTAGAG+AGG 0.656445 3_4:+44854439 Msa0502500:CDS
TGATGAATATATGATATGTG+AGG 0.659084 3_4:+44854199 Msa0502500:CDS
GATGAATATATGATATGTGA+GGG 0.669067 3_4:+44854200 Msa0502500:CDS
ATCAAATCATCTTTGACACG+AGG 0.674690 3_4:+44854386 Msa0502500:CDS
GTAGGGTATTAATCACAACT+AGG 0.674769 3_4:+44854894 Msa0502500:CDS
ATGACATAGACAATTTAACA+AGG 0.679947 3_4:-44856320 None:intergenic
TGAATACATAGGAACTCATG+GGG 0.684174 3_4:+44856958 Msa0502500:intron
AGTGCAATGGATGATACTGG+TGG 0.723556 3_4:+44854341 Msa0502500:CDS
GAAGTGCAAGCAGATCATGG+TGG 0.829094 3_4:+44856039 Msa0502500:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATAATTTTTTTAAAAAATT+GGG - chr3_4:44856864-44856883 Msa0502510:intron 0.0%
!!! TTATAATTTTTTTAAAAAAT+TGG - chr3_4:44856865-44856884 Msa0502510:intron 0.0%
!!! ATGTTATAACAAAGATTTTA+GGG + chr3_4:44855218-44855237 Msa0502500:CDS 15.0%
!! ATTATGTTCCAAAAAATTTA+GGG + chr3_4:44855767-44855786 Msa0502500:CDS 15.0%
!!! TCTTTGATTGATAGTAAAAA+AGG + chr3_4:44854869-44854888 Msa0502500:CDS 20.0%
!! TAAAATTGTTGAAAAATGTG+AGG + chr3_4:44855075-44855094 Msa0502500:CDS 20.0%
!! AAAATTGTTGAAAAATGTGA+GGG + chr3_4:44855076-44855095 Msa0502500:CDS 20.0%
!!! TTTGTTATAACATGTATACT+GGG - chr3_4:44855211-44855230 None:intergenic 20.0%
!!! CATGTTATAACAAAGATTTT+AGG + chr3_4:44855217-44855236 Msa0502500:CDS 20.0%
!! TTAGTAATTTGAACTTTGAA+GGG - chr3_4:44855714-44855733 None:intergenic 20.0%
!! TTTAGTAATTTGAACTTTGA+AGG - chr3_4:44855715-44855734 None:intergenic 20.0%
!! CATTATGTTCCAAAAAATTT+AGG + chr3_4:44855766-44855785 Msa0502500:CDS 20.0%
!! TTATGTTCCAAAAAATTTAG+GGG + chr3_4:44855768-44855787 Msa0502500:CDS 20.0%
!!! AATAAATCCCCTAAATTTTT+TGG - chr3_4:44855778-44855797 None:intergenic 20.0%
!! TAAAGCTTAAATATCTCAAA+TGG - chr3_4:44855801-44855820 None:intergenic 20.0%
!!! AATTTGAAATCCATCAAAAT+TGG + chr3_4:44856498-44856517 Msa0502500:CDS 20.0%
!!! TTTTTTAAAAAATTGGGGAA+AGG - chr3_4:44856858-44856877 Msa0502510:intron 20.0%
!!! TTCCTTTTTACTTTGAAATA+AGG + chr3_4:44857192-44857211 Msa0502500:three_prime_UTR 20.0%
!!! ATCCTTATTTCAAAGTAAAA+AGG - chr3_4:44857197-44857216 Msa0502510:intron 20.0%
! TGATGAATATATGATATGTG+AGG + chr3_4:44854199-44854218 Msa0502500:CDS 25.0%
! GATGAATATATGATATGTGA+GGG + chr3_4:44854200-44854219 Msa0502500:CDS 25.0%
! TTGAAAAAGTCATTAATCTC+AGG - chr3_4:44854263-44854282 None:intergenic 25.0%
! TATTTGTAGACAAAGAATCT+TGG - chr3_4:44854288-44854307 None:intergenic 25.0%
! AATTAAGCAATTCTTTCCTT+GGG - chr3_4:44854508-44854527 None:intergenic 25.0%
! AAATTAAGCAATTCTTTCCT+TGG - chr3_4:44854509-44854528 None:intergenic 25.0%
!!! ATTGCTTAATTTGTTGATAG+AGG + chr3_4:44854517-44854536 Msa0502500:CDS 25.0%
!!! TTGCTTAATTTGTTGATAGA+GGG + chr3_4:44854518-44854537 Msa0502500:CDS 25.0%
! AATACTTTGATTGTCATGTA+TGG + chr3_4:44854636-44854655 Msa0502500:CDS 25.0%
! CAAAACATTTACAAACAAAC+AGG + chr3_4:44854707-44854726 Msa0502500:CDS 25.0%
!! TTGATAGTAAAAAAGGAAGT+AGG + chr3_4:44854876-44854895 Msa0502500:CDS 25.0%
! TGATAGTAAAAAAGGAAGTA+GGG + chr3_4:44854877-44854896 Msa0502500:CDS 25.0%
!! AAAGATTTTTCATGACTCAA+AGG - chr3_4:44854983-44855002 None:intergenic 25.0%
! TTTGAGTCATGAAAAATCTT+TGG + chr3_4:44854982-44855001 Msa0502500:CDS 25.0%
!!! TTTGGAGCTTTTTTATAAGA+AGG + chr3_4:44855000-44855019 Msa0502500:CDS 25.0%
!! GATACATTCATAAGATTTTC+AGG - chr3_4:44855052-44855071 None:intergenic 25.0%
! TTGATGTGAATATCTTTCTT+TGG - chr3_4:44855143-44855162 None:intergenic 25.0%
! AAGAAAGATATTCACATCAA+TGG + chr3_4:44855143-44855162 Msa0502500:CDS 25.0%
! AGAAAGATATTCACATCAAT+GGG + chr3_4:44855144-44855163 Msa0502500:CDS 25.0%
!! CTTTGTTATAACATGTATAC+TGG - chr3_4:44855212-44855231 None:intergenic 25.0%
! AAACAATGCTTCTTATACTT+TGG + chr3_4:44855271-44855290 Msa0502500:CDS 25.0%
!!! TTATACTTTGGAATATTTCC+TGG + chr3_4:44855283-44855302 Msa0502500:CDS 25.0%
! CATGAGACTAATTAAACAAT+GGG + chr3_4:44855324-44855343 Msa0502500:CDS 25.0%
! AATGATCCTTGATAAAATTC+AGG + chr3_4:44855504-44855523 Msa0502500:CDS 25.0%
!!! GCTTTAGAAATACAAAAGTA+AGG + chr3_4:44855815-44855834 Msa0502500:CDS 25.0%
! TTAACAAGCTTCAAAAGTTA+AGG + chr3_4:44855923-44855942 Msa0502500:CDS 25.0%
! CTCAAGAAGTTAAAAATGTT+GGG + chr3_4:44856090-44856109 Msa0502500:CDS 25.0%
! TCAAGAAGTTAAAAATGTTG+GGG + chr3_4:44856091-44856110 Msa0502500:CDS 25.0%
! ATGACATAGACAATTTAACA+AGG - chr3_4:44856323-44856342 None:intergenic 25.0%
! AGATCTTTCAATGATTTCAA+TGG - chr3_4:44856366-44856385 None:intergenic 25.0%
!!! ATTTGCATTTTCAAGATGAA+GGG + chr3_4:44856436-44856455 Msa0502500:CDS 25.0%
! GTGTAGATATAAATCACAAT+TGG - chr3_4:44856758-44856777 Msa0502510:intron 25.0%
!! TTTTCAAATTCGCTCAAAAA+CGG + chr3_4:44856791-44856810 Msa0502500:intron 25.0%
! AATCGTCAGATCATTAAAAA+TGG + chr3_4:44856899-44856918 Msa0502500:intron 25.0%
!! TATTTGTGCTTTGAATACAT+AGG + chr3_4:44856947-44856966 Msa0502500:intron 25.0%
TTGGTTACTTCCTTTAATAG+TGG - chr3_4:44854002-44854021 None:intergenic 30.0%
GAAGTAACCAATATGATAAG+AGG + chr3_4:44854011-44854030 Msa0502500:CDS 30.0%
!! TCAAAGATGATTTGATTTGG+AGG - chr3_4:44854382-44854401 None:intergenic 30.0%
GTGTCAAAGATGATTTGATT+TGG - chr3_4:44854385-44854404 None:intergenic 30.0%
! TTTGCTGTCAAAAACTATCT+TGG - chr3_4:44854606-44854625 None:intergenic 30.0%
!!! GAGCAATTTTGGAATGATAT+TGG + chr3_4:44854842-44854861 Msa0502500:CDS 30.0%
!! AAGGCATTATTTGACTTGAA+TGG + chr3_4:44855019-44855038 Msa0502500:CDS 30.0%
! TGAAAATTTGAGTTCAGAGT+TGG + chr3_4:44855177-44855196 Msa0502500:CDS 30.0%
! AAGCATTGTTTGAGATTGTA+AGG - chr3_4:44855262-44855281 None:intergenic 30.0%
! CCATTGTTTAATTAGTCTCA+TGG - chr3_4:44855326-44855345 None:intergenic 30.0%
CCATGAGACTAATTAAACAA+TGG + chr3_4:44855323-44855342 Msa0502500:CDS 30.0%
ACTAATTAAACAATGGGTAG+CGG + chr3_4:44855330-44855349 Msa0502500:CDS 30.0%
! TTAGGTCCTGAATTTTATCA+AGG - chr3_4:44855513-44855532 None:intergenic 30.0%
ATTTCTTGACAGTAAAGTGT+TGG - chr3_4:44855617-44855636 None:intergenic 30.0%
ATGTTGAATGCTCAAACATT+CGG + chr3_4:44855635-44855654 Msa0502500:CDS 30.0%
! CATAGTTTGCCTTATATCTA+AGG - chr3_4:44855881-44855900 None:intergenic 30.0%
CTTAGATATAAGGCAAACTA+TGG + chr3_4:44855879-44855898 Msa0502500:CDS 30.0%
!!! TGAAGCTTGTTAATCTCTTT+TGG - chr3_4:44855916-44855935 None:intergenic 30.0%
TATGGAATTCAACTGAATGA+TGG + chr3_4:44855982-44856001 Msa0502500:CDS 30.0%
GCTCAAGAAGTTAAAAATGT+TGG + chr3_4:44856089-44856108 Msa0502500:CDS 30.0%
ATGCTAAGGCATAACAAATT+GGG - chr3_4:44856390-44856409 None:intergenic 30.0%
!! CATTTGCATTTTCAAGATGA+AGG + chr3_4:44856435-44856454 Msa0502500:CDS 30.0%
GTTTAAGAGTCTTAAGAAAC+TGG + chr3_4:44856458-44856477 Msa0502500:CDS 30.0%
GTCTTAAGAAACTGGTATTT+AGG + chr3_4:44856466-44856485 Msa0502500:CDS 30.0%
AGTTAATATTCCACAACTGA+TGG + chr3_4:44856557-44856576 Msa0502500:CDS 30.0%
ATATGACAAACTTTAAGCCT+TGG - chr3_4:44856609-44856628 None:intergenic 30.0%
TTTGAATACATAGGAACTCA+TGG + chr3_4:44856956-44856975 Msa0502500:intron 30.0%
TTGAATACATAGGAACTCAT+GGG + chr3_4:44856957-44856976 Msa0502500:intron 30.0%
! CCTTTAATAGTGGAAGCAAA+TGG - chr3_4:44853992-44854011 None:intergenic 35.0%
CCATTTGCTTCCACTATTAA+AGG + chr3_4:44853989-44854008 Msa0502500:CDS 35.0%
! TCATGTCTGCAACTTCTTTT+GGG - chr3_4:44854040-44854059 None:intergenic 35.0%
! TTCATGTCTGCAACTTCTTT+TGG - chr3_4:44854041-44854060 None:intergenic 35.0%
CATCAACAATGCAGATAGAA+TGG + chr3_4:44854088-44854107 Msa0502500:CDS 35.0%
ACAAATAGCCTACAAGATTC+AGG + chr3_4:44854301-44854320 Msa0502500:CDS 35.0%
CTTAATGTCCTGAATCTTGT+AGG - chr3_4:44854312-44854331 None:intergenic 35.0%
TAAGTCACTAGTTAGTGCAA+TGG + chr3_4:44854328-44854347 Msa0502500:CDS 35.0%
!! ATTTGATTTGGAGGAATCCA+TGG - chr3_4:44854373-44854392 None:intergenic 35.0%
ATCAAATCATCTTTGACACG+AGG + chr3_4:44854386-44854405 Msa0502500:CDS 35.0%
!! CTCTCTAAGGTTGTTCAATA+TGG - chr3_4:44854441-44854460 None:intergenic 35.0%
CATATTGAACAACCTTAGAG+AGG + chr3_4:44854439-44854458 Msa0502500:CDS 35.0%
TGAGCTTCTCCAATGTAAAA+TGG - chr3_4:44854467-44854486 None:intergenic 35.0%
! GATAGTTTTTGACAGCAAAG+AGG + chr3_4:44854607-44854626 Msa0502500:CDS 35.0%
! TCCTTGGGAAATTTCTGAAA+TGG + chr3_4:44854739-44854758 Msa0502500:CDS 35.0%
TCCATTTCAGAAATTTCCCA+AGG - chr3_4:44854743-44854762 None:intergenic 35.0%
!! GATATACCTTTTGTTTCGCA+AGG - chr3_4:44854798-44854817 None:intergenic 35.0%
! TCATCTTGTTTGATGAAGTG+TGG + chr3_4:44854816-44854835 Msa0502500:CDS 35.0%
! AAGTGTGGAATGAGCAATTT+TGG + chr3_4:44854831-44854850 Msa0502500:CDS 35.0%
! GTAGGGTATTAATCACAACT+AGG + chr3_4:44854894-44854913 Msa0502500:CDS 35.0%
GATATTCACATCAATGGGAA+AGG + chr3_4:44855149-44855168 Msa0502500:CDS 35.0%
GTGTTAACTTCATAGTTTCC+AGG - chr3_4:44855304-44855323 None:intergenic 35.0%
CAAAGAGGAAACAGGAAAAA+CGG + chr3_4:44855363-44855382 Msa0502500:CDS 35.0%
AAAAACGGTGGAAGAAATTG+CGG + chr3_4:44855378-44855397 Msa0502500:CDS 35.0%
! TAACAGAGTTGATCCATAGA+AGG + chr3_4:44855410-44855429 Msa0502500:CDS 35.0%
ATACAAGAACCAACCTTCTA+TGG - chr3_4:44855426-44855445 None:intergenic 35.0%
GAGTAAAGTTGCAAAAGCTT+AGG - chr3_4:44855531-44855550 None:intergenic 35.0%
CAACTTTACTCACGATAATG+AGG + chr3_4:44855540-44855559 Msa0502500:CDS 35.0%
! TGGAACTGGTTGATATTGTT+AGG - chr3_4:44855597-44855616 None:intergenic 35.0%
ACCTAGAGACCTTAGATATA+AGG + chr3_4:44855869-44855888 Msa0502500:CDS 35.0%
TAGACGTATCATAAGCTAGA+AGG - chr3_4:44855951-44855970 None:intergenic 35.0%
CTAGCTTATGATACGTCTAA+AGG + chr3_4:44855952-44855971 Msa0502500:CDS 35.0%
! TATGATACGTCTAAAGGTGT+TGG + chr3_4:44855958-44855977 Msa0502500:CDS 35.0%
ATTCAACTGAATGATGGCAT+TGG + chr3_4:44855988-44856007 Msa0502500:CDS 35.0%
! CAAGTGTTGCATCTCATTTA+TGG - chr3_4:44856160-44856179 None:intergenic 35.0%
CATAAATGAGATGCAACACT+TGG + chr3_4:44856158-44856177 Msa0502500:CDS 35.0%
TGAAGCTCTCTAATCCAATA+TGG - chr3_4:44856297-44856316 None:intergenic 35.0%
CAATGGATCATGAGTTAACA+TGG - chr3_4:44856349-44856368 None:intergenic 35.0%
GATGCTAAGGCATAACAAAT+TGG - chr3_4:44856391-44856410 None:intergenic 35.0%
! TGCTCTTTCACCAATTTTGA+TGG - chr3_4:44856511-44856530 None:intergenic 35.0%
! TAACTTGAACTTCTCTAGAG+AGG - chr3_4:44856538-44856557 None:intergenic 35.0%
TAATATTCCACAACTGATGG+AGG + chr3_4:44856560-44856579 Msa0502500:CDS 35.0%
CATACCTTTATCACCAACTT+CGG - chr3_4:44856728-44856747 Msa0502510:three_prime_UTR 35.0%
GCTCAAAAACGGTTGTAAAA+TGG + chr3_4:44856802-44856821 Msa0502500:intron 35.0%
TGAATACATAGGAACTCATG+GGG + chr3_4:44856958-44856977 Msa0502500:intron 35.0%
GATAATTCAGATTCTCCTTG+TGG + chr3_4:44856980-44856999 Msa0502500:CDS 35.0%
GGAATGTCATCATTGTTGAA+AGG - chr3_4:44857006-44857025 Msa0502510:three_prime_UTR 35.0%
TCAAAGCAGACACTGAAATA+TGG - chr3_4:44857027-44857046 Msa0502510:three_prime_UTR 35.0%
ATATGAGACCTTTGAACAGA+TGG + chr3_4:44857072-44857091 Msa0502500:CDS 35.0%
TATGAGACCTTTGAACAGAT+GGG + chr3_4:44857073-44857092 Msa0502500:CDS 35.0%
TGGGACACCTCTTATCATAT+TGG - chr3_4:44854021-44854040 None:intergenic 40.0%
CGTATTGTCTTCTTCAGCTT+CGG - chr3_4:44854114-44854133 None:intergenic 40.0%
GTTAGTGCAATGGATGATAC+TGG + chr3_4:44854338-44854357 Msa0502500:CDS 40.0%
GATACTGGTGGAAAAAACCA+TGG + chr3_4:44854353-44854372 Msa0502500:CDS 40.0%
TGTAAAATGGAGCCTCTCTA+AGG - chr3_4:44854454-44854473 None:intergenic 40.0%
! AGAGAGGCTCCATTTTACAT+TGG + chr3_4:44854455-44854474 Msa0502500:CDS 40.0%
! ATTGGAGAAGCTCAAGTTGT+GGG + chr3_4:44854473-44854492 Msa0502500:CDS 40.0%
GATACTCCTTGCGAAACAAA+AGG + chr3_4:44854789-44854808 Msa0502500:CDS 40.0%
ATGTTGCCATGTCTTGTAAG+AGG + chr3_4:44854924-44854943 Msa0502500:CDS 40.0%
!! ATTAAACAATGGGTAGCGGA+AGG + chr3_4:44855334-44855353 Msa0502500:CDS 40.0%
!! TTAAACAATGGGTAGCGGAA+GGG + chr3_4:44855335-44855354 Msa0502500:CDS 40.0%
! AGAGTTGATCCATAGAAGGT+TGG + chr3_4:44855414-44855433 Msa0502500:CDS 40.0%
GCTAGAAGTTGTCATGTTCA+TGG + chr3_4:44855469-44855488 Msa0502500:CDS 40.0%
!! TGACAGTAAAGTGTTGGAAC+TGG - chr3_4:44855611-44855630 None:intergenic 40.0%
AGAGTTACCAGATTCCTTTG+TGG + chr3_4:44855681-44855700 Msa0502500:CDS 40.0%
ATACTTGCCACAAAGGAATC+TGG - chr3_4:44855691-44855710 None:intergenic 40.0%
ACAAAAGTAAGGAATCTCCC+AGG + chr3_4:44855826-44855845 Msa0502500:CDS 40.0%
GAAGCTTACCAATAGATCCT+GGG - chr3_4:44855846-44855865 None:intergenic 40.0%
TGAAGCTTACCAATAGATCC+TGG - chr3_4:44855847-44855866 None:intergenic 40.0%
! GCCTTATATCTAAGGTCTCT+AGG - chr3_4:44855873-44855892 None:intergenic 40.0%
!! ACGTCTAAAGGTGTTGGATA+TGG + chr3_4:44855964-44855983 Msa0502500:CDS 40.0%
AGTTGGAGAGGTTTCCATAT+TGG + chr3_4:44856280-44856299 Msa0502500:CDS 40.0%
ATCCTCTTTCGTGCATATGA+AGG + chr3_4:44856408-44856427 Msa0502500:CDS 40.0%
GTGTTCGAGGAAAACATCAA+TGG + chr3_4:44856667-44856686 Msa0502500:CDS 40.0%
ACATCAATGGATCGTAGAGA+AGG + chr3_4:44856680-44856699 Msa0502500:CDS 40.0%
GTAGAGAAGGTTCCATTTGT+AGG + chr3_4:44856693-44856712 Msa0502500:CDS 40.0%
CGGTCAACTATTCCTACAAA+TGG - chr3_4:44856708-44856727 Msa0502510:three_prime_UTR 40.0%
TAGGAATAGTTGACCGAAGT+TGG + chr3_4:44856712-44856731 Msa0502500:intron 40.0%
!! TTGACCGAAGTTGGTGATAA+AGG + chr3_4:44856721-44856740 Msa0502500:intron 40.0%
ATCATTGTTGAAAGGCCACA+AGG - chr3_4:44856998-44857017 Msa0502510:three_prime_UTR 40.0%
TGAATCACCCATCTGTTCAA+AGG - chr3_4:44857083-44857102 Msa0502510:three_prime_UTR 40.0%
AAGCAACTGATCGCAAGCAA+AGG - chr3_4:44853955-44853974 None:intergenic 45.0%
ATCAGTTGCTTCCGTTAGCT+CGG + chr3_4:44853964-44853983 Msa0502500:CDS 45.0%
AGTGCAATGGATGATACTGG+TGG + chr3_4:44854341-44854360 Msa0502500:CDS 45.0%
! CATTGGAGAAGCTCAAGTTG+TGG + chr3_4:44854472-44854491 Msa0502500:CDS 45.0%
TGTCTCGACACACAGTTGAA+GGG + chr3_4:44854666-44854685 Msa0502500:CDS 45.0%
AAACAGGAGAAGCTCTTCCT+TGG + chr3_4:44854723-44854742 Msa0502500:CDS 45.0%
AACAGGAGAAGCTCTTCCTT+GGG + chr3_4:44854724-44854743 Msa0502500:CDS 45.0%
CGAAGACCTCTTACAAGACA+TGG - chr3_4:44854933-44854952 None:intergenic 45.0%
CCAATAGCCACAATTGCAAG+TGG - chr3_4:44855106-44855125 None:intergenic 45.0%
CCACTTGCAATTGTGGCTAT+TGG + chr3_4:44855103-44855122 Msa0502500:CDS 45.0%
CTTGCAATTGTGGCTATTGG+TGG + chr3_4:44855106-44855125 Msa0502500:CDS 45.0%
GGGTTTGTCAAAGAGGAAAC+AGG + chr3_4:44855355-44855374 Msa0502500:CDS 45.0%
AGAGGAAACAGGAAAAACGG+TGG + chr3_4:44855366-44855385 Msa0502500:CDS 45.0%
TCATCAAGCTTAGGACTGAC+TGG - chr3_4:44855567-44855586 None:intergenic 45.0%
TGAAGGGATACTTGCCACAA+AGG - chr3_4:44855698-44855717 None:intergenic 45.0%
AGGAATCTCCCAGGATCTAT+TGG + chr3_4:44855835-44855854 Msa0502500:CDS 45.0%
AGCTGATTACCGATCTTGAG+AGG + chr3_4:44856067-44856086 Msa0502500:CDS 45.0%
CTTCTTGAGCCTCTCAAGAT+CGG - chr3_4:44856079-44856098 None:intergenic 45.0%
TTCAGAAGCTTCGCCTTGTA+GGG + chr3_4:44856256-44856275 Msa0502500:CDS 45.0%
ATGCACGAAAGAGGATGCTA+AGG - chr3_4:44856404-44856423 None:intergenic 45.0%
CACCTTCATATGCACGAAAG+AGG - chr3_4:44856413-44856432 None:intergenic 45.0%
!! CAAAGCATTGATCGTGTTCG+AGG + chr3_4:44856654-44856673 Msa0502500:CDS 45.0%
!!! ATAATTTTTTTAAAAAATTG+GGG - chr3_4:44856863-44856882 Msa0502510:intron 5.0%
TCAGTTGCTTCCGTTAGCTC+GGG + chr3_4:44853965-44853984 Msa0502500:CDS 50.0%
AGCAAATGGTCCCGAGCTAA+CGG - chr3_4:44853978-44853997 None:intergenic 50.0%
GAAGAAGACAATACGCGCGA+CGG + chr3_4:44854119-44854138 Msa0502500:CDS 50.0%
GGAAGTAAAGCTGCACATCC+AGG - chr3_4:44854242-44854261 None:intergenic 50.0%
TTGTGGGATTCGAAGACCCA+AGG + chr3_4:44854489-44854508 Msa0502500:CDS 50.0%
AGAAGAGCTCACTGTCGTCT+CGG + chr3_4:44854544-44854563 Msa0502500:CDS 50.0%
GTGTCTCGACACACAGTTGA+AGG + chr3_4:44854665-44854684 Msa0502500:CDS 50.0%
ACACAGTTGAAGGGTTGCTG+AGG + chr3_4:44854675-44854694 Msa0502500:CDS 50.0%
CACAGTTGAAGGGTTGCTGA+GGG + chr3_4:44854676-44854695 Msa0502500:CDS 50.0%
AGCGGAAGGGTTTGTCAAAG+AGG + chr3_4:44855348-44855367 Msa0502500:CDS 50.0%
CACTTCGCGTAGCGTTTGTA+GGG - chr3_4:44856025-44856044 None:intergenic 50.0%
GAAGTGCAAGCAGATCATGG+TGG + chr3_4:44856039-44856058 Msa0502500:CDS 50.0%
!! AGGCGAAGCTTCTGAAGTCT+AGG - chr3_4:44856252-44856271 None:intergenic 50.0%
CTTCAGAAGCTTCGCCTTGT+AGG + chr3_4:44856255-44856274 Msa0502500:CDS 50.0%
ACCTCTCCAACTTCCCTACA+AGG - chr3_4:44856272-44856291 None:intergenic 50.0%
GGCAAGTTGTAGACACCAGA+AGG - chr3_4:44856588-44856607 None:intergenic 50.0%
CTGGTGTCTACAACTTGCCA+AGG + chr3_4:44856589-44856608 Msa0502500:CDS 50.0%
GGACAACAGCCTCATGATCC+TGG + chr3_4:44854221-44854240 Msa0502500:CDS 55.0%
GCTGCACATCCAGGATCATG+AGG - chr3_4:44854233-44854252 None:intergenic 55.0%
TCACTGTCGTCTCGGTGGTT+GGG + chr3_4:44854552-44854571 Msa0502500:CDS 55.0%
! GGGTCTGCCACTTGCAATTG+TGG + chr3_4:44855096-44855115 Msa0502500:CDS 55.0%
GGCGACGAGTCATCAAGCTT+AGG - chr3_4:44855576-44855595 None:intergenic 55.0%
GCACTTCGCGTAGCGTTTGT+AGG - chr3_4:44856026-44856045 None:intergenic 55.0%
CGCGAAGTGCAAGCAGATCA+TGG + chr3_4:44856036-44856055 Msa0502500:CDS 55.0%
GCTTCGCCTTGTAGGGAAGT+TGG + chr3_4:44856263-44856282 Msa0502500:CDS 55.0%
GCCTTGTAGGGAAGTTGGAG+AGG + chr3_4:44856268-44856287 Msa0502500:CDS 55.0%
!! GAAGGCACCTCCATCAGTTG+TGG - chr3_4:44856570-44856589 None:intergenic 55.0%
!! CAACTGATGGAGGTGCCTTC+TGG + chr3_4:44856570-44856589 Msa0502500:CDS 55.0%
AGAGCTCACTGTCGTCTCGG+TGG + chr3_4:44854547-44854566 Msa0502500:CDS 60.0%
CTCACTGTCGTCTCGGTGGT+TGG + chr3_4:44854551-44854570 Msa0502500:CDS 60.0%
TGTCGTCTCGGTGGTTGGGA+TGG + chr3_4:44854556-44854575 Msa0502500:CDS 60.0%
GTCGTCTCGGTGGTTGGGAT+GGG + chr3_4:44854557-44854576 Msa0502500:CDS 60.0%
TCTCGGTGGTTGGGATGGGA+GGG + chr3_4:44854561-44854580 Msa0502500:CDS 60.0%
GTCTCGGTGGTTGGGATGGG+AGG + chr3_4:44854560-44854579 Msa0502500:CDS 65.0%
GTGGTTGGGATGGGAGGGCA+AGG + chr3_4:44854566-44854585 Msa0502500:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 44853933 44857233 44853933 ID=Msa0502500;Name=Msa0502500
chr3_4 mRNA 44853933 44857233 44853933 ID=Msa0502500-mRNA-1;Parent=Msa0502500;Name=Msa0502500-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|0|0.5|1|1|1|2|119|980
chr3_4 exon 44853933 44856729 44853933 ID=Msa0502500-mRNA-1:exon:9517;Parent=Msa0502500-mRNA-1
chr3_4 exon 44856969 44857233 44856969 ID=Msa0502500-mRNA-1:exon:9518;Parent=Msa0502500-mRNA-1
chr3_4 CDS 44853933 44856729 44853933 ID=Msa0502500-mRNA-1:cds;Parent=Msa0502500-mRNA-1
chr3_4 CDS 44856969 44857114 44856969 ID=Msa0502500-mRNA-1:cds;Parent=Msa0502500-mRNA-1
chr3_4 three_prime_UTR 44857115 44857233 44857115 ID=Msa0502500-mRNA-1:three_prime_utr;Parent=Msa0502500-mRNA-1
Gene Sequence

>Msa0502500

ATGTGTGACACTGTAATCTCCTTTGCTTGCGATCAGTTGCTTCCGTTAGCTCGGGACCATTTGCTTCCACTATTAAAGGAAGTAACCAATATGATAAGAGGTGTCCCAAAAGAAGTTGCAGACATGAAAAATGAACTAGAAAGCATTGAAGACTTCATCAACAATGCAGATAGAATGGCCGAAGCTGAAGAAGACAATACGCGCGACGGAATCAAAGCAAAGATCAGACAGCTAAGAGAAGCATCTTTTCGCATACAAGATGTCATTGATGAATATATGATATGTGAGGGACAACAGCCTCATGATCCTGGATGTGCAGCTTTACTTCCTGAGATTAATGACTTTTTCAAAACCAAGATTCTTTGTCTACAAATAGCCTACAAGATTCAGGACATTAAGTCACTAGTTAGTGCAATGGATGATACTGGTGGAAAAAACCATGGATTCCTCCAAATCAAATCATCTTTGACACGAGGATCAAGTAGTTCTGCAGCAAATGAAAACACCATATTGAACAACCTTAGAGAGGCTCCATTTTACATTGGAGAAGCTCAAGTTGTGGGATTCGAAGACCCAAGGAAAGAATTGCTTAATTTGTTGATAGAGGGAAGAGAAGAGCTCACTGTCGTCTCGGTGGTTGGGATGGGAGGGCAAGGTAAAACAACTCTTGCCAAGATAGTTTTTGACAGCAAAGAGGTTATTGAATACTTTGATTGTCATGTATGGATCACAGTGTCTCGACACACAGTTGAAGGGTTGCTGAGGGACATTTTACAAAACATTTACAAACAAACAGGAGAAGCTCTTCCTTGGGAAATTTCTGAAATGGATCGAAAGTCTTTAATTGATAAAGTGAGATACTCCTTGCGAAACAAAAGGTATATCATCTTGTTTGATGAAGTGTGGAATGAGCAATTTTGGAATGATATTGGATTTTCTTTGATTGATAGTAAAAAAGGAAGTAGGGTATTAATCACAACTAGGAAGATTGATGTTGCCATGTCTTGTAAGAGGTCTTCGTTTTTTCTTGAAGTGCATGAGTTGAAACCTTTGAGTCATGAAAAATCTTTGGAGCTTTTTTATAAGAAGGCATTATTTGACTTGAATGGACTATGTCCTGAAAATCTTATGAATGTATCTTCTAAAATTGTTGAAAAATGTGAGGGTCTGCCACTTGCAATTGTGGCTATTGGTGGTCTTTTATCTACCAAAGAAAGATATTCACATCAATGGGAAAGGTTTAGTGAAAATTTGAGTTCAGAGTTGGACAACAATCCCAGTATACATGTTATAACAAAGATTTTAGGGTTTAGTTTTCATGATTTACCTTACAATCTCAAACAATGCTTCTTATACTTTGGAATATTTCCTGGAAACTATGAAGTTAACACCATGAGACTAATTAAACAATGGGTAGCGGAAGGGTTTGTCAAAGAGGAAACAGGAAAAACGGTGGAAGAAATTGCGGAACAATATTTAACAGAGTTGATCCATAGAAGGTTGGTTCTTGTATCTTCTTTTTCAAGTAATAGCAAAGCTAGAAGTTGTCATGTTCATGGCTTAATACGAGAAATGATCCTTGATAAAATTCAGGACCTAAGCTTTTGCAACTTTACTCACGATAATGAGGACCAGTCAGTCCTAAGCTTGATGACTCGTCGCCTAACAATATCAACCAGTTCCAACACTTTACTGTCAAGAAATGTTGAATGCTCAAACATTCGGTCACTGCATGTTTTCAAAAATGAAGAGTTACCAGATTCCTTTGTGGCAAGTATCCCTTCAAAGTTCAAATTACTAAAAGTATTTGATTTTGAAGATGTTGCGCTGCATCATTATGTTCCAAAAAATTTAGGGGATTTATTCCATTTGAGATATTTAAGCTTTAGAAATACAAAAGTAAGGAATCTCCCAGGATCTATTGGTAAGCTTCATAACCTAGAGACCTTAGATATAAGGCAAACTATGGTGCGCGAGTTACCAAAAGAGATTAACAAGCTTCAAAAGTTAAGGCACCTTCTAGCTTATGATACGTCTAAAGGTGTTGGATATGGAATTCAACTGAATGATGGCATTGGAGACATAGCGTCCCTACAAACGCTACGCGAAGTGCAAGCAGATCATGGTGGAGTTGAGCTGATTACCGATCTTGAGAGGCTCAAGAAGTTAAAAATGTTGGGGTTGACTAATGTTAAGCAAGAATACACAGAAGCTGTATGTTCTTCCATAAATGAGATGCAACACTTGGAGAAGCTATACATTGCTGCAATAAATAGACATGAAGTCATTGATTTTTTGAATTTCGATGTATCATTACCTAGACTTCAGAAGCTTCGCCTTGTAGGGAAGTTGGAGAGGTTTCCATATTGGATTAGAGAGCTTCAAAACCTTGTTAAATTGTCTATGTCATATTCCATGTTAACTCATGATCCATTGAAATCATTGAAAGATCTTCCCAATTTGTTATGCCTTAGCATCCTCTTTCGTGCATATGAAGGTGAACATTTGCATTTTCAAGATGAAGGGTTTAAGAGTCTTAAGAAACTGGTATTTAGGCGCTTGTATAATTTGAAATCCATCAAAATTGGTGAAAGAGCATTATCCTCTCTAGAGAAGTTCAAGTTAGTTAATATTCCACAACTGATGGAGGTGCCTTCTGGTGTCTACAACTTGCCAAGGCTTAAAGTTTGTCATATCATAAACATGACTGATGAGTTTGAGCAAAGCATTGATCGTGTTCGAGGAAAACATCAATGGATCGTAGAGAAGGTTCCATTTGTAGGAATAGTTGACCGAAGAACTCATGGGGATAATTCAGATTCTCCTTGTGGCCTTTCAACAATGATGACATTCCATATTTCAGTGTCTGCTTTGATGCGTCAATTCTCAAATAAAGAGCAATATGAGACCTTTGAACAGATGGGTGATTCAAGACATTTTTGA
Protein sequence

>Msa0502500

MCDTVISFACDQLLPLARDHLLPLLKEVTNMIRGVPKEVADMKNELESIEDFINNADRMAEAEEDNTRDGIKAKIRQLREASFRIQDVIDEYMICEGQQPHDPGCAALLPEINDFFKTKILCLQIAYKIQDIKSLVSAMDDTGGKNHGFLQIKSSLTRGSSSSAANENTILNNLREAPFYIGEAQVVGFEDPRKELLNLLIEGREELTVVSVVGMGGQGKTTLAKIVFDSKEVIEYFDCHVWITVSRHTVEGLLRDILQNIYKQTGEALPWEISEMDRKSLIDKVRYSLRNKRYIILFDEVWNEQFWNDIGFSLIDSKKGSRVLITTRKIDVAMSCKRSSFFLEVHELKPLSHEKSLELFYKKALFDLNGLCPENLMNVSSKIVEKCEGLPLAIVAIGGLLSTKERYSHQWERFSENLSSELDNNPSIHVITKILGFSFHDLPYNLKQCFLYFGIFPGNYEVNTMRLIKQWVAEGFVKEETGKTVEEIAEQYLTELIHRRLVLVSSFSSNSKARSCHVHGLIREMILDKIQDLSFCNFTHDNEDQSVLSLMTRRLTISTSSNTLLSRNVECSNIRSLHVFKNEELPDSFVASIPSKFKLLKVFDFEDVALHHYVPKNLGDLFHLRYLSFRNTKVRNLPGSIGKLHNLETLDIRQTMVRELPKEINKLQKLRHLLAYDTSKGVGYGIQLNDGIGDIASLQTLREVQADHGGVELITDLERLKKLKMLGLTNVKQEYTEAVCSSINEMQHLEKLYIAAINRHEVIDFLNFDVSLPRLQKLRLVGKLERFPYWIRELQNLVKLSMSYSMLTHDPLKSLKDLPNLLCLSILFRAYEGEHLHFQDEGFKSLKKLVFRRLYNLKSIKIGERALSSLEKFKLVNIPQLMEVPSGVYNLPRLKVCHIINMTDEFEQSIDRVRGKHQWIVEKVPFVGIVDRRTHGDNSDSPCGLSTMMTFHISVSALMRQFSNKEQYETFEQMGDSRHF*