Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0164660 | XP_003629897.2 | 95.842 | 481 | 20 | 0 | 1 | 481 | 1 | 481 | 0.0 | 819 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0164660 | sp|Q8L7A0|TAUE3_ARATH | 65.375 | 413 | 138 | 2 | 67 | 478 | 67 | 475 | 0.0 | 519 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0164660 | B7FND1 | 95.842 | 481 | 20 | 0 | 1 | 481 | 1 | 481 | 0.0 | 819 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006700 | Msa0164660 | 0.810573 | 1.077588e-50 | -8.615850e-47 |
| Msa0020630 | Msa0164660 | 0.815919 | 7.223216e-52 | -8.615850e-47 |
| Msa0022640 | Msa0164660 | 0.812978 | 3.229501e-51 | -8.615850e-47 |
| Msa0030030 | Msa0164660 | 0.812758 | 3.608954e-51 | -8.615850e-47 |
| Msa0036150 | Msa0164660 | 0.830141 | 3.470709e-55 | -8.615850e-47 |
| Msa0038310 | Msa0164660 | 0.804987 | 1.659211e-49 | -8.615850e-47 |
| Msa0044100 | Msa0164660 | 0.802388 | 5.743832e-49 | -8.615850e-47 |
| Msa0051100 | Msa0164660 | 0.815385 | 9.500173e-52 | -8.615850e-47 |
| Msa0055280 | Msa0164660 | 0.811924 | 5.488221e-51 | -8.615850e-47 |
| Msa0060600 | Msa0164660 | 0.803355 | 3.626790e-49 | -8.615850e-47 |
| Msa0101060 | Msa0164660 | 0.822546 | 2.236062e-53 | -8.615850e-47 |
| Msa0105340 | Msa0164660 | 0.815143 | 1.075102e-51 | -8.615850e-47 |
| Msa0139720 | Msa0164660 | -0.831324 | 1.780775e-55 | -8.615850e-47 |
| Msa0140910 | Msa0164660 | 0.828467 | 8.845033e-55 | -8.615850e-47 |
| Msa0141670 | Msa0164660 | 0.809593 | 1.752934e-50 | -8.615850e-47 |
| Msa0149500 | Msa0164660 | 0.808959 | 2.397102e-50 | -8.615850e-47 |
| Msa0153440 | Msa0164660 | 0.801465 | 8.890304e-49 | -8.615850e-47 |
| Msa0159750 | Msa0164660 | 0.813601 | 2.356988e-51 | -8.615850e-47 |
| Msa0161680 | Msa0164660 | 0.809937 | 1.478418e-50 | -8.615850e-47 |
| Msa0162050 | Msa0164660 | 0.803337 | 3.658782e-49 | -8.615850e-47 |
| Msa0164660 | Msa0169960 | 0.827413 | 1.586412e-54 | -8.615850e-47 |
| Msa0164660 | Msa0183750 | 0.822895 | 1.854270e-53 | -8.615850e-47 |
| Msa0164660 | Msa0185640 | -0.814655 | 1.379398e-51 | -8.615850e-47 |
| Msa0164660 | Msa0197750 | -0.817189 | 3.752663e-52 | -8.615850e-47 |
| Msa0164660 | Msa0211010 | 0.831120 | 1.998319e-55 | -8.615850e-47 |
| Msa0164660 | Msa0213080 | 0.833551 | 4.998097e-56 | -8.615850e-47 |
| Msa0164660 | Msa0217470 | 0.805764 | 1.140515e-49 | -8.615850e-47 |
| Msa0164660 | Msa0232860 | 0.810971 | 8.837817e-51 | -8.615850e-47 |
| Msa0164660 | Msa0235550 | 0.821534 | 3.837426e-53 | -8.615850e-47 |
| Msa0164660 | Msa0242700 | -0.800324 | 1.520562e-48 | -8.615850e-47 |
| Msa0164660 | Msa0251670 | 0.824488 | 7.853811e-54 | -8.615850e-47 |
| Msa0164660 | Msa0253370 | 0.821815 | 3.304058e-53 | -8.615850e-47 |
| Msa0164660 | Msa0260970 | 0.815091 | 1.103853e-51 | -8.615850e-47 |
| Msa0164660 | Msa0264940 | -0.805740 | 1.153407e-49 | -8.615850e-47 |
| Msa0164660 | Msa0269360 | 0.801565 | 8.481126e-49 | -8.615850e-47 |
| Msa0164660 | Msa0272420 | 0.802781 | 4.767389e-49 | -8.615850e-47 |
| Msa0164660 | Msa0274520 | 0.802611 | 5.167021e-49 | -8.615850e-47 |
| Msa0164660 | Msa0277280 | -0.815647 | 8.305336e-52 | -8.615850e-47 |
| Msa0164660 | Msa0282170 | 0.820502 | 6.632431e-53 | -8.615850e-47 |
| Msa0164660 | Msa0290650 | 0.817852 | 2.660275e-52 | -8.615850e-47 |
| Msa0164660 | Msa0292180 | 0.807948 | 3.938695e-50 | -8.615850e-47 |
| Msa0164660 | Msa0296610 | 0.810435 | 1.154299e-50 | -8.615850e-47 |
| Msa0164660 | Msa0302990 | -0.811458 | 6.930279e-51 | -8.615850e-47 |
| Msa0164660 | Msa0304990 | 0.818595 | 1.805877e-52 | -8.615850e-47 |
| Msa0164660 | Msa0306130 | 0.834669 | 2.622383e-56 | -8.615850e-47 |
| Msa0164660 | Msa0323630 | 0.833783 | 4.372313e-56 | -8.615850e-47 |
| Msa0164660 | Msa0329710 | 0.820866 | 5.469039e-53 | -8.615850e-47 |
| Msa0164660 | Msa0330270 | 0.817247 | 3.639962e-52 | -8.615850e-47 |
| Msa0164660 | Msa0330400 | 0.819736 | 9.929849e-53 | -8.615850e-47 |
| Msa0164660 | Msa0342340 | -0.808367 | 3.207432e-50 | -8.615850e-47 |
| Msa0164660 | Msa0357380 | 0.811311 | 7.459703e-51 | -8.615850e-47 |
| Msa0164660 | Msa0365360 | 0.820155 | 7.963981e-53 | -8.615850e-47 |
| Msa0164660 | Msa0371540 | 0.809529 | 1.809011e-50 | -8.615850e-47 |
| Msa0164660 | Msa0371570 | 0.809816 | 1.569307e-50 | -8.615850e-47 |
| Msa0164660 | Msa0371610 | 0.830822 | 2.364490e-55 | -8.615850e-47 |
| Msa0164660 | Msa0371820 | 0.823548 | 1.305091e-53 | -8.615850e-47 |
| Msa0164660 | Msa0389050 | 0.815912 | 7.247710e-52 | -8.615850e-47 |
| Msa0164660 | Msa0389060 | 0.822674 | 2.087580e-53 | -8.615850e-47 |
| Msa0164660 | Msa0409820 | 0.832959 | 7.019460e-56 | -8.615850e-47 |
| Msa0164660 | Msa0411000 | 0.803281 | 3.757570e-49 | -8.615850e-47 |
| Msa0164660 | Msa0413740 | 0.813000 | 3.194331e-51 | -8.615850e-47 |
| Msa0164660 | Msa0414070 | 0.824395 | 8.263835e-54 | -8.615850e-47 |
| Msa0164660 | Msa0418000 | 0.867039 | 1.835766e-65 | -8.615850e-47 |
| Msa0164660 | Msa0419990 | 0.800994 | 1.109766e-48 | -8.615850e-47 |
| Msa0164660 | Msa0423600 | 0.829939 | 3.888044e-55 | -8.615850e-47 |
| Msa0164660 | Msa0440110 | 0.808322 | 3.278897e-50 | -8.615850e-47 |
| Msa0164660 | Msa0457370 | 0.805437 | 1.335320e-49 | -8.615850e-47 |
| Msa0164660 | Msa0458790 | 0.808255 | 3.388806e-50 | -8.615850e-47 |
| Msa0164660 | Msa0459120 | 0.800406 | 1.463204e-48 | -8.615850e-47 |
| Msa0164660 | Msa0465930 | 0.810151 | 1.329143e-50 | -8.615850e-47 |
| Msa0164660 | Msa0465970 | 0.817984 | 2.483151e-52 | -8.615850e-47 |
| Msa0164660 | Msa0502500 | 0.836469 | 9.188533e-57 | -8.615850e-47 |
| Msa0164660 | Msa0505390 | 0.812602 | 3.903682e-51 | -8.615850e-47 |
| Msa0164660 | Msa0505660 | 0.810843 | 9.422322e-51 | -8.615850e-47 |
| Msa0164660 | Msa0511890 | 0.803438 | 3.485619e-49 | -8.615850e-47 |
| Msa0164660 | Msa0517340 | 0.813605 | 2.351828e-51 | -8.615850e-47 |
| Msa0164660 | Msa0524050 | 0.823890 | 1.085634e-53 | -8.615850e-47 |
| Msa0164660 | Msa0530930 | 0.806745 | 7.085621e-50 | -8.615850e-47 |
| Msa0164660 | Msa0557680 | 0.855282 | 7.002406e-62 | -8.615850e-47 |
| Msa0164660 | Msa0563140 | 0.831748 | 1.400229e-55 | -8.615850e-47 |
| Msa0164660 | Msa0565490 | 0.876806 | 1.041586e-68 | -8.615850e-47 |
| Msa0164660 | Msa0574170 | 0.807847 | 4.139107e-50 | -8.615850e-47 |
| Msa0164660 | Msa0576420 | 0.802089 | 6.620323e-49 | -8.615850e-47 |
| Msa0164660 | Msa0589600 | 0.801685 | 8.012631e-49 | -8.615850e-47 |
| Msa0164660 | Msa0592470 | 0.812207 | 4.761378e-51 | -8.615850e-47 |
| Msa0164660 | Msa0598250 | 0.828892 | 6.981429e-55 | -8.615850e-47 |
| Msa0164660 | Msa0617370 | 0.821265 | 4.426531e-53 | -8.615850e-47 |
| Msa0164660 | Msa0618290 | 0.865466 | 5.786852e-65 | -8.615850e-47 |
| Msa0164660 | Msa0619330 | 0.826673 | 2.384014e-54 | -8.615850e-47 |
| Msa0164660 | Msa0620640 | 0.819356 | 1.212353e-52 | -8.615850e-47 |
| Msa0164660 | Msa0621890 | 0.827756 | 1.312492e-54 | -8.615850e-47 |
| Msa0164660 | Msa0623170 | 0.809507 | 1.828623e-50 | -8.615850e-47 |
| Msa0164660 | Msa0632560 | 0.800128 | 1.666630e-48 | -8.615850e-47 |
| Msa0164660 | Msa0641020 | 0.814813 | 1.272329e-51 | -8.615850e-47 |
| Msa0164660 | Msa0647000 | 0.812415 | 4.287776e-51 | -8.615850e-47 |
| Msa0164660 | Msa0649970 | 0.800879 | 1.171521e-48 | -8.615850e-47 |
| Msa0164660 | Msa0651790 | 0.804201 | 2.419772e-49 | -8.615850e-47 |
| Msa0164660 | Msa0657890 | 0.900802 | 5.088218e-78 | -8.615850e-47 |
| Msa0164660 | Msa0669340 | 0.805552 | 1.263251e-49 | -8.615850e-47 |
| Msa0164660 | Msa0669990 | 0.806979 | 6.324232e-50 | -8.615850e-47 |
| Msa0164660 | Msa0678240 | 0.833288 | 5.813846e-56 | -8.615850e-47 |
| Msa0164660 | Msa0701770 | 0.970751 | 4.277204e-132 | -8.615850e-47 |
| Msa0164660 | Msa0714600 | 0.807833 | 4.165829e-50 | -8.615850e-47 |
| Msa0164660 | Msa0718240 | 0.800774 | 1.230616e-48 | -8.615850e-47 |
| Msa0164660 | Msa0721150 | 0.839651 | 1.395136e-57 | -8.615850e-47 |
| Msa0164660 | Msa0722930 | 0.821746 | 3.428062e-53 | -8.615850e-47 |
| Msa0164660 | Msa0723140 | 0.825147 | 5.491715e-54 | -8.615850e-47 |
| Msa0164660 | Msa0726610 | 0.804483 | 2.114239e-49 | -8.615850e-47 |
| Msa0164660 | Msa0731710 | 0.846547 | 2.027609e-59 | -8.615850e-47 |
| Msa0164660 | Msa0739570 | 0.820762 | 5.779479e-53 | -8.615850e-47 |
| Msa0164660 | Msa0740420 | 0.803073 | 4.148932e-49 | -8.615850e-47 |
| Msa0164660 | Msa0752580 | 0.815104 | 1.096942e-51 | -8.615850e-47 |
| Msa0164660 | Msa0754500 | 0.803472 | 3.430490e-49 | -8.615850e-47 |
| Msa0164660 | Msa0756480 | 0.839298 | 1.722680e-57 | -8.615850e-47 |
| Msa0164660 | Msa0760890 | 0.810840 | 9.436822e-51 | -8.615850e-47 |
| Msa0164660 | Msa0761760 | 0.841740 | 3.954903e-58 | -8.615850e-47 |
| Msa0164660 | Msa0770430 | 0.806130 | 9.551264e-50 | -8.615850e-47 |
| Msa0164660 | Msa0772150 | 0.810485 | 1.126050e-50 | -8.615850e-47 |
| Msa0164660 | Msa0773610 | 0.813858 | 2.068900e-51 | -8.615850e-47 |
| Msa0164660 | Msa0782330 | 0.812107 | 5.006927e-51 | -8.615850e-47 |
| Msa0164660 | Msa0792510 | 0.823421 | 1.397869e-53 | -8.615850e-47 |
| Msa0164660 | Msa0796430 | -0.816276 | 6.012736e-52 | -8.615850e-47 |
| Msa0164660 | Msa0801100 | 0.806894 | 6.591386e-50 | -8.615850e-47 |
| Msa0164660 | Msa0801390 | 0.802311 | 5.959039e-49 | -8.615850e-47 |
| Msa0164660 | Msa0804060 | 0.843098 | 1.726609e-58 | -8.615850e-47 |
| Msa0164660 | Msa0811000 | 0.852294 | 5.073031e-61 | -8.615850e-47 |
| Msa0164660 | Msa0820670 | 0.807042 | 6.133140e-50 | -8.615850e-47 |
| Msa0164660 | Msa0830900 | 0.814184 | 1.753509e-51 | -8.615850e-47 |
| Msa0164660 | Msa0834270 | -0.824157 | 9.397433e-54 | -8.615850e-47 |
| Msa0164660 | Msa0835510 | 0.834539 | 2.826690e-56 | -8.615850e-47 |
| Msa0164660 | Msa0837990 | 0.804335 | 2.270028e-49 | -8.615850e-47 |
| Msa0164660 | Msa0842240 | 0.833377 | 5.524382e-56 | -8.615850e-47 |
| Msa0164660 | Msa0843280 | 0.803416 | 3.522170e-49 | -8.615850e-47 |
| Msa0164660 | Msa0860270 | 0.840284 | 9.540231e-58 | -8.615850e-47 |
| Msa0164660 | Msa0862020 | 0.831497 | 1.614608e-55 | -8.615850e-47 |
| Msa0164660 | Msa0870630 | 0.814642 | 1.388519e-51 | -8.615850e-47 |
| Msa0164660 | Msa0887070 | 0.829916 | 3.937595e-55 | -8.615850e-47 |
| Msa0164660 | Msa0896210 | 0.814227 | 1.715382e-51 | -8.615850e-47 |
| Msa0164660 | Msa0900200 | 0.806525 | 7.886159e-50 | -8.615850e-47 |
| Msa0164660 | Msa0902140 | 0.802667 | 5.032779e-49 | -8.615850e-47 |
| Msa0164660 | Msa0903730 | 0.847074 | 1.455088e-59 | -8.615850e-47 |
| Msa0164660 | Msa0921630 | 0.811098 | 8.298288e-51 | -8.615850e-47 |
| Msa0164660 | Msa0937940 | 0.810104 | 1.360435e-50 | -8.615850e-47 |
| Msa0164660 | Msa0950620 | 0.803091 | 4.112785e-49 | -8.615850e-47 |
| Msa0164660 | Msa0951720 | 0.847898 | 8.641202e-60 | -8.615850e-47 |
| Msa0164660 | Msa0965520 | 0.814178 | 1.758395e-51 | -8.615850e-47 |
| Msa0164660 | Msa0973130 | 0.826288 | 2.946152e-54 | -8.615850e-47 |
| Msa0164660 | Msa0973230 | 0.829669 | 4.523168e-55 | -8.615850e-47 |
| Msa0164660 | Msa0981010 | 0.835436 | 1.679858e-56 | -8.615850e-47 |
| Msa0164660 | Msa0984720 | 0.817816 | 2.710665e-52 | -8.615850e-47 |
| Msa0164660 | Msa0988500 | 0.810002 | 1.431103e-50 | -8.615850e-47 |
| Msa0164660 | Msa1000020 | 0.819959 | 8.831676e-53 | -8.615850e-47 |
| Msa0164660 | Msa1009000 | 0.802168 | 6.377218e-49 | -8.615850e-47 |
| Msa0164660 | Msa1014350 | 0.806324 | 8.695203e-50 | -8.615850e-47 |
| Msa0164660 | Msa1032350 | 0.821700 | 3.512903e-53 | -8.615850e-47 |
| Msa0164660 | Msa1036390 | 0.819653 | 1.037500e-52 | -8.615850e-47 |
| Msa0164660 | Msa1038320 | 0.818705 | 1.704800e-52 | -8.615850e-47 |
| Msa0164660 | Msa1044040 | 0.809480 | 1.852897e-50 | -8.615850e-47 |
| Msa0164660 | Msa1046610 | 0.801051 | 1.080612e-48 | -8.615850e-47 |
| Msa0164660 | Msa1049950 | 0.809168 | 2.162039e-50 | -8.615850e-47 |
| Msa0164660 | Msa1055360 | 0.813079 | 3.069565e-51 | -8.615850e-47 |
| Msa0164660 | Msa1069300 | 0.806195 | 9.253428e-50 | -8.615850e-47 |
| Msa0164660 | Msa1072350 | 0.831332 | 1.772882e-55 | -8.615850e-47 |
| Msa0164660 | Msa1073500 | 0.812196 | 4.786831e-51 | -8.615850e-47 |
| Msa0164660 | Msa1076680 | 0.817555 | 3.102762e-52 | -8.615850e-47 |
| Msa0164660 | Msa1079610 | 0.814336 | 1.623053e-51 | -8.615850e-47 |
| Msa0164660 | Msa1081600 | 0.838480 | 2.804758e-57 | -8.615850e-47 |
| Msa0164660 | Msa1081700 | 0.825637 | 4.206018e-54 | -8.615850e-47 |
| Msa0164660 | Msa1089680 | 0.806553 | 7.778945e-50 | -8.615850e-47 |
| Msa0164660 | Msa1093390 | 0.815797 | 7.689659e-52 | -8.615850e-47 |
| Msa0164660 | Msa1108780 | 0.810935 | 8.999257e-51 | -8.615850e-47 |
| Msa0164660 | Msa1118140 | 0.815383 | 9.511039e-52 | -8.615850e-47 |
| Msa0164660 | Msa1122510 | 0.807145 | 5.831527e-50 | -8.615850e-47 |
| Msa0164660 | Msa1132560 | -0.835838 | 1.328902e-56 | -8.615850e-47 |
| Msa0164660 | Msa1139240 | 0.804767 | 1.844670e-49 | -8.615850e-47 |
| Msa0164660 | Msa1140010 | 0.832802 | 7.676930e-56 | -8.615850e-47 |
| Msa0164660 | Msa1152280 | 0.800028 | 1.746675e-48 | -8.615850e-47 |
| Msa0164660 | Msa1159360 | 0.817036 | 4.061161e-52 | -8.615850e-47 |
| Msa0164660 | Msa1166370 | 0.832069 | 1.166658e-55 | -8.615850e-47 |
| Msa0164660 | Msa1182830 | 0.823775 | 1.155170e-53 | -8.615850e-47 |
| Msa0164660 | Msa1184580 | 0.804083 | 2.561461e-49 | -8.615850e-47 |
| Msa0164660 | Msa1201990 | 0.804293 | 2.316150e-49 | -8.615850e-47 |
| Msa0164660 | Msa1204980 | -0.806823 | 6.820189e-50 | -8.615850e-47 |
| Msa0164660 | Msa1205010 | -0.809947 | 1.470715e-50 | -8.615850e-47 |
| Msa0164660 | Msa1207480 | -0.831749 | 1.399086e-55 | -8.615850e-47 |
| Msa0164660 | Msa1221200 | -0.816039 | 6.790137e-52 | -8.615850e-47 |
| Msa0164660 | Msa1224400 | 0.803909 | 2.784049e-49 | -8.615850e-47 |
| Msa0164660 | Msa1233770 | 0.806527 | 7.876713e-50 | -8.615850e-47 |
| Msa0164660 | Msa1237260 | 0.800847 | 1.189333e-48 | -8.615850e-47 |
| Msa0164660 | Msa1238480 | 0.804283 | 2.326874e-49 | -8.615850e-47 |
| Msa0164660 | Msa1244830 | 0.821851 | 3.241376e-53 | -8.615850e-47 |
| Msa0164660 | Msa1256540 | -0.806995 | 6.273039e-50 | -8.615850e-47 |
| Msa0164660 | Msa1258280 | 0.816354 | 5.775067e-52 | -8.615850e-47 |
| Msa0164660 | Msa1262310 | 0.809051 | 2.290280e-50 | -8.615850e-47 |
| Msa0164660 | Msa1279850 | 0.801405 | 9.145716e-49 | -8.615850e-47 |
| Msa0164660 | Msa1279860 | 0.846128 | 2.638186e-59 | -8.615850e-47 |
| Msa0164660 | Msa1279870 | 0.827866 | 1.234493e-54 | -8.615850e-47 |
| Msa0164660 | Msa1287160 | 0.859390 | 4.275417e-63 | -8.615850e-47 |
| Msa0164660 | Msa1287340 | 0.848377 | 6.372383e-60 | -8.615850e-47 |
| Msa0164660 | Msa1287700 | 0.805166 | 1.522261e-49 | -8.615850e-47 |
| Msa0164660 | Msa1296960 | -0.819867 | 9.271438e-53 | -8.615850e-47 |
| Msa0164660 | Msa1298290 | 0.811437 | 7.003173e-51 | -8.615850e-47 |
| Msa0164660 | Msa1302150 | 0.807637 | 4.587190e-50 | -8.615850e-47 |
| Msa0164660 | Msa1302160 | 0.804792 | 1.822290e-49 | -8.615850e-47 |
| Msa0164660 | Msa1306200 | 0.812812 | 3.510829e-51 | -8.615850e-47 |
| Msa0164660 | Msa1317710 | 0.826840 | 2.174705e-54 | -8.615850e-47 |
| Msa0164660 | Msa1326000 | 0.819288 | 1.256829e-52 | -8.615850e-47 |
| Msa0164660 | Msa1329990 | 0.829089 | 6.254704e-55 | -8.615850e-47 |
| Msa0164660 | Msa1337190 | 0.813011 | 3.176622e-51 | -8.615850e-47 |
| Msa0164660 | Msa1355260 | 0.853072 | 3.041827e-61 | -8.615850e-47 |
| Msa0164660 | Msa1365040 | -0.802516 | 5.407354e-49 | -8.615850e-47 |
| Msa0164660 | Msa1369700 | 0.809003 | 2.345821e-50 | -8.615850e-47 |
| Msa0164660 | Msa1373950 | 0.822926 | 1.823711e-53 | -8.615850e-47 |
| Msa0164660 | Msa1386020 | 0.804768 | 1.843465e-49 | -8.615850e-47 |
| Msa0164660 | Msa1387090 | 0.800098 | 1.690081e-48 | -8.615850e-47 |
| Msa0164660 | Msa1389120 | 0.801475 | 8.850169e-49 | -8.615850e-47 |
| Msa0164660 | Msa1397540 | 0.807853 | 4.126280e-50 | -8.615850e-47 |
| Msa0164660 | Msa1399500 | 0.806982 | 6.314348e-50 | -8.615850e-47 |
| Msa0164660 | Msa1405470 | 0.819590 | 1.072440e-52 | -8.615850e-47 |
| Msa0164660 | Msa1409750 | 0.815180 | 1.055071e-51 | -8.615850e-47 |
| Msa0164660 | Msa1418200 | 0.811225 | 7.787299e-51 | -8.615850e-47 |
| Msa0164660 | Msa1428440 | 0.813062 | 3.095442e-51 | -8.615850e-47 |
| Msa0164660 | Msa1437190 | 0.818221 | 2.195355e-52 | -8.615850e-47 |
| Msa0164660 | Msa1438270 | 0.810075 | 1.380149e-50 | -8.615850e-47 |
| Msa0164660 | Msa1445250 | 0.809289 | 2.036318e-50 | -8.615850e-47 |
| Msa0164660 | Msa1447440 | 0.812924 | 3.318918e-51 | -8.615850e-47 |
| Msa0164660 | Msa1450020 | 0.822230 | 2.646790e-53 | -8.615850e-47 |
| Msa0164660 | Msa1457670 | -0.806252 | 9.003578e-50 | -8.615850e-47 |
| Msa0164660 | Msa1460310 | -0.810657 | 1.033581e-50 | -8.615850e-47 |
| Msa0164660 | Msa1460380 | 0.825528 | 4.463306e-54 | -8.615850e-47 |
| Msa0164660 | Msa1464560 | 0.816340 | 5.816252e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0164660 | MtrunA17_Chr8g0380211 | 95.842 | 481 | 20 | 0 | 1 | 481 | 1 | 481 | 0.0 | 819 |
| Msa0164660 | MtrunA17_Chr3g0139541 | 60.000 | 470 | 162 | 5 | 26 | 478 | 9 | 469 | 0.0 | 516 |
| Msa0164660 | MtrunA17_Chr8g0380191 | 78.310 | 355 | 33 | 2 | 127 | 481 | 10 | 320 | 1.80e-175 | 495 |
| Msa0164660 | MtrunA17_Chr8g0373471 | 63.043 | 414 | 148 | 3 | 67 | 480 | 62 | 470 | 2.49e-171 | 490 |
| Msa0164660 | MtrunA17_Chr5g0403901 | 58.099 | 463 | 176 | 5 | 21 | 475 | 16 | 468 | 6.04e-157 | 454 |
| Msa0164660 | MtrunA17_Chr1g0157751 | 52.298 | 457 | 207 | 4 | 24 | 475 | 5 | 455 | 1.96e-144 | 421 |
| Msa0164660 | MtrunA17_Chr7g0265481 | 48.998 | 449 | 206 | 5 | 41 | 476 | 22 | 460 | 2.38e-122 | 365 |
| Msa0164660 | MtrunA17_Chr1g0179621 | 47.115 | 416 | 203 | 3 | 71 | 476 | 55 | 463 | 1.02e-109 | 333 |
| Msa0164660 | MtrunA17_Chr2g0280401 | 30.591 | 389 | 243 | 9 | 105 | 475 | 87 | 466 | 1.91e-42 | 156 |
| Msa0164660 | MtrunA17_Chr3g0139621 | 55.462 | 119 | 31 | 1 | 310 | 406 | 27 | 145 | 4.33e-26 | 103 |
| Msa0164660 | MtrunA17_Chr8g0380201 | 90.385 | 52 | 4 | 1 | 74 | 125 | 1 | 51 | 3.06e-13 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0164660 | AT2G25737.1 | 65.375 | 413 | 138 | 2 | 67 | 478 | 67 | 475 | 0.0 | 519 |
| Msa0164660 | AT2G25737.2 | 62.783 | 309 | 110 | 2 | 67 | 374 | 67 | 371 | 3.04e-123 | 364 |
| Msa0164660 | AT2G36630.1 | 46.304 | 460 | 222 | 5 | 28 | 476 | 12 | 457 | 1.22e-117 | 353 |
| Msa0164660 | AT1G11540.2 | 31.311 | 412 | 249 | 9 | 81 | 475 | 56 | 450 | 1.70e-42 | 157 |
| Msa0164660 | AT1G11540.1 | 30.990 | 384 | 231 | 9 | 109 | 475 | 1 | 367 | 2.04e-42 | 154 |
| Msa0164660 | AT1G61740.1 | 29.885 | 435 | 255 | 10 | 68 | 475 | 47 | 458 | 1.05e-39 | 149 |
| Msa0164660 | AT4G21250.1 | 32.530 | 415 | 250 | 8 | 74 | 475 | 52 | 449 | 5.10e-38 | 144 |
| Msa0164660 | AT4G21260.1 | 30.259 | 347 | 186 | 7 | 114 | 456 | 80 | 374 | 1.67e-31 | 125 |
Find 116 sgRNAs with CRISPR-Local
Find 605 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTAAGCAACCTTCTTAATT+AGG | 0.114343 | 1_4:+44180384 | None:intergenic |
| AGAAAGCTTATTGCCATATT+AGG | 0.163678 | 1_4:-44178820 | Msa0164660:CDS |
| CTTGGTGGAGGGTTTATCTT+AGG | 0.185544 | 1_4:-44179260 | Msa0164660:CDS |
| TTGCATCAAATCCAACAATT+AGG | 0.193443 | 1_4:+44187469 | None:intergenic |
| TGCATTCAAACACACGTTTA+AGG | 0.202922 | 1_4:+44178105 | None:intergenic |
| TATATTACATGTTAGAAAAT+TGG | 0.215788 | 1_4:+44178069 | None:intergenic |
| TTCAGTTAACGCTTTCTTAA+AGG | 0.219446 | 1_4:-44180432 | Msa0164660:CDS |
| ATTATAGTAGGCACCATAAT+TGG | 0.247950 | 1_4:-44187561 | Msa0164660:CDS |
| AAATTTGTGCCTCAGATATT+AGG | 0.252420 | 1_4:-44179982 | Msa0164660:intron |
| CAACTTGCTCTGTGATATAT+TGG | 0.267366 | 1_4:-44179566 | Msa0164660:CDS |
| ATTTGTTTGTTGATCTCCTT+TGG | 0.293134 | 1_4:+44179355 | None:intergenic |
| AATTGAAGCTCTCCCTAATA+TGG | 0.302872 | 1_4:+44178807 | None:intergenic |
| CTGTTATTGAGAATGTTTAT+TGG | 0.304503 | 1_4:-44179783 | Msa0164660:CDS |
| GCATATCAAATCTAATTAAA+AGG | 0.306853 | 1_4:-44178326 | Msa0164660:CDS |
| TTAAGCAACCTTCTTAATTA+GGG | 0.308535 | 1_4:+44180385 | None:intergenic |
| AAGGAGATCAACAAACAAAT+TGG | 0.317337 | 1_4:-44179352 | Msa0164660:CDS |
| TCAGTTAACGCTTTCTTAAA+GGG | 0.319947 | 1_4:-44180431 | Msa0164660:CDS |
| AAGGACAATTCACAATTAAA+TGG | 0.329730 | 1_4:-44180259 | Msa0164660:intron |
| ATCAACCCCTTTGGTCTCAT+TGG | 0.333284 | 1_4:+44187928 | None:intergenic |
| TGTATCCAGGGGATGAAATT+TGG | 0.334894 | 1_4:-44187591 | Msa0164660:intron |
| GCCACTATTGCTGCACTTGT+TGG | 0.337503 | 1_4:-44178856 | Msa0164660:CDS |
| GGCACCATAATTGGATTTCT+AGG | 0.338037 | 1_4:-44187552 | Msa0164660:CDS |
| GGCTTGCTTGGTCTTGGTGG+AGG | 0.362627 | 1_4:-44179272 | Msa0164660:CDS |
| GAAAGCTTATTGCCATATTA+GGG | 0.364933 | 1_4:-44178819 | Msa0164660:CDS |
| TGATCCTAGAAATCCAATTA+TGG | 0.365400 | 1_4:+44187548 | None:intergenic |
| TTGGATATTGAATCTACTTC+AGG | 0.367111 | 1_4:-44179547 | Msa0164660:intron |
| CCCATGCTTACCCTAATTGT+TGG | 0.368742 | 1_4:-44187480 | Msa0164660:CDS |
| TGCATCAAATCCAACAATTA+GGG | 0.369369 | 1_4:+44187470 | None:intergenic |
| AACAAAGAGTACATGGGATT+TGG | 0.369556 | 1_4:-44178297 | Msa0164660:CDS |
| GCACTGTAGGAGGTGTTGGC+GGG | 0.372369 | 1_4:-44187518 | Msa0164660:CDS |
| ATCTTAGGGCCACTATTCAT+TGG | 0.374272 | 1_4:-44179245 | Msa0164660:CDS |
| TATATAAATATATAGATATA+CGG | 0.382605 | 1_4:+44188109 | None:intergenic |
| TGCACTTGTTGGGCAACATT+TGG | 0.384364 | 1_4:-44178845 | Msa0164660:CDS |
| ACTTATGTGCGTACGGGGTT+AGG | 0.385870 | 1_4:-44178272 | Msa0164660:CDS |
| TGGTGTGAAGTCATGATTAC+AGG | 0.393803 | 1_4:-44180746 | Msa0164660:intron |
| ATCGGTGGCTTGCTTGGTCT+TGG | 0.395082 | 1_4:-44179278 | Msa0164660:CDS |
| GCTTGCTTGGTCTTGGTGGA+GGG | 0.410598 | 1_4:-44179271 | Msa0164660:CDS |
| CCACTCACTCCTACAGCTAT+AGG | 0.412332 | 1_4:+44179422 | None:intergenic |
| CTTCAAATTACAGGTGGAAC+AGG | 0.416473 | 1_4:-44178348 | Msa0164660:intron |
| GGGCCACTATTCATTGGACT+TGG | 0.419608 | 1_4:-44179239 | Msa0164660:CDS |
| GGATTTCTAGGATCATCATT+TGG | 0.421957 | 1_4:-44187540 | Msa0164660:CDS |
| GGCACTGTAGGAGGTGTTGG+CGG | 0.422371 | 1_4:-44187519 | Msa0164660:CDS |
| ACTGTAGGAGGTGTTGGCGG+GGG | 0.427739 | 1_4:-44187516 | Msa0164660:CDS |
| CCACTATTGCTGCACTTGTT+GGG | 0.428728 | 1_4:-44178855 | Msa0164660:CDS |
| TTCCAACCAATGTTAATGCT+TGG | 0.430788 | 1_4:-44180635 | Msa0164660:CDS |
| TTAGAAAATTGGAACTAAGT+TGG | 0.434497 | 1_4:+44178080 | None:intergenic |
| GGAATAATCGGTGGCTTGCT+TGG | 0.437494 | 1_4:-44179284 | Msa0164660:CDS |
| TGTTCATGTGGCATAATTGC+TGG | 0.437661 | 1_4:-44179305 | Msa0164660:CDS |
| TTTGGTTGGAGAATTATAGT+AGG | 0.441512 | 1_4:-44187573 | Msa0164660:CDS |
| TTCCAAGCATTAACATTGGT+TGG | 0.444141 | 1_4:+44180633 | None:intergenic |
| GTGGTTGGAAATCAGCATTT+AGG | 0.446065 | 1_4:-44178152 | Msa0164660:three_prime_UTR |
| AGCATGAATATCAACCCCTT+TGG | 0.447045 | 1_4:+44187919 | None:intergenic |
| AATGTTTATTGGAAGGAACT+TGG | 0.447909 | 1_4:-44179772 | Msa0164660:CDS |
| CCTACCCTTACCATATGGAA+TGG | 0.459474 | 1_4:+44178979 | None:intergenic |
| GGCATAATTGCTGGAATAAT+CGG | 0.460672 | 1_4:-44179296 | Msa0164660:CDS |
| CACTGTAGGAGGTGTTGGCG+GGG | 0.461011 | 1_4:-44187517 | Msa0164660:CDS |
| GGTGGCTTGCTTGGTCTTGG+TGG | 0.463574 | 1_4:-44179275 | Msa0164660:CDS |
| CCCAACAAGTGCAGCAATAG+TGG | 0.464252 | 1_4:+44178855 | None:intergenic |
| TTGGTGGAGGGTTTATCTTA+GGG | 0.471899 | 1_4:-44179259 | Msa0164660:CDS |
| ATGATACTTGCATTACAGAT+AGG | 0.472420 | 1_4:-44179727 | Msa0164660:CDS |
| TTTGGTAACTTATGTGCGTA+CGG | 0.475564 | 1_4:-44178279 | Msa0164660:CDS |
| TTGGTAACTTATGTGCGTAC+GGG | 0.479683 | 1_4:-44178278 | Msa0164660:CDS |
| CCTTTGGTCTCATTGGAAGC+TGG | 0.479702 | 1_4:+44187935 | None:intergenic |
| GACATGAAATGGGTAATTCT+CGG | 0.482560 | 1_4:-44188052 | Msa0164660:CDS |
| CTACCCTTACCATATGGAAT+GGG | 0.487368 | 1_4:+44178980 | None:intergenic |
| CAGCTTCCAATGAGACCAAA+GGG | 0.488935 | 1_4:-44187934 | Msa0164660:CDS |
| GGGTAATTCTCGGAAGATCA+AGG | 0.491898 | 1_4:-44188042 | Msa0164660:CDS |
| TCCAACAATTAGGGTAAGCA+TGG | 0.493163 | 1_4:+44187479 | None:intergenic |
| TCTTAAAGGGTGTTAACACT+TGG | 0.497473 | 1_4:-44180418 | Msa0164660:CDS |
| TCACAGGAAGGTCAAGGGTT+GGG | 0.499471 | 1_4:+44180681 | None:intergenic |
| GTCATGATTACAGGTGGAGC+AGG | 0.500271 | 1_4:-44180737 | Msa0164660:CDS |
| AAAGTTGTTATCATCCAGTC+AGG | 0.505433 | 1_4:+44180578 | None:intergenic |
| TTTGGCACTGTAGGAGGTGT+TGG | 0.507733 | 1_4:-44187522 | Msa0164660:CDS |
| AAAAGAAACCCTAATTAAGA+AGG | 0.512933 | 1_4:-44180393 | Msa0164660:intron |
| GCTTGAAAACAAAGAGTACA+TGG | 0.518457 | 1_4:-44178304 | Msa0164660:CDS |
| GGATCATCATTTGGCACTGT+AGG | 0.523691 | 1_4:-44187531 | Msa0164660:CDS |
| TATATTTATATACATGATGA+TGG | 0.524752 | 1_4:-44188098 | Msa0164660:exon |
| TTCTGCATCTATGTCTGTGG+TGG | 0.525724 | 1_4:-44179026 | Msa0164660:CDS |
| TCCAGGGGATGAAATTTGGT+TGG | 0.525775 | 1_4:-44187587 | Msa0164660:intron |
| TGTAGGAGTGAGTGGATATG+AGG | 0.525980 | 1_4:-44179414 | Msa0164660:CDS |
| TATTGAGAATGTTTATTGGA+AGG | 0.526737 | 1_4:-44179779 | Msa0164660:CDS |
| GCTAAATCATAGTCAATCAC+AGG | 0.528690 | 1_4:+44180665 | None:intergenic |
| ATCAATATGTGTAAAACTTG+AGG | 0.531622 | 1_4:-44178237 | Msa0164660:three_prime_UTR |
| TCATCATTTGGCACTGTAGG+AGG | 0.542570 | 1_4:-44187528 | Msa0164660:CDS |
| TTTCAGGTACCTATAGCTGT+AGG | 0.544579 | 1_4:-44179431 | Msa0164660:intron |
| AAAAGTACTACATGTGTGGT+TGG | 0.547002 | 1_4:-44178167 | Msa0164660:three_prime_UTR |
| TTAATTCTATATTGTTCATG+TGG | 0.547087 | 1_4:-44179317 | Msa0164660:CDS |
| TAGAATTAAGGTACCTGAGG+AGG | 0.548268 | 1_4:+44179212 | None:intergenic |
| TGGACTTGGAATCCCTCCTC+AGG | 0.548917 | 1_4:-44179225 | Msa0164660:intron |
| ATCACAGGAAGGTCAAGGGT+TGG | 0.551848 | 1_4:+44180680 | None:intergenic |
| CCTATAGCTGTAGGAGTGAG+TGG | 0.552521 | 1_4:-44179422 | Msa0164660:CDS |
| AAATCAGCATTTAGGACATA+CGG | 0.552529 | 1_4:-44178144 | Msa0164660:three_prime_UTR |
| GCTACACATGATCTTCAAGA+AGG | 0.556897 | 1_4:-44179950 | Msa0164660:CDS |
| CTACACATGATCTTCAAGAA+GGG | 0.558961 | 1_4:-44179949 | Msa0164660:CDS |
| TTTGTGAGTGGTATATCACT+AGG | 0.562499 | 1_4:-44178757 | Msa0164660:intron |
| GCTACAATTCCAGGAAGCTA+AGG | 0.564231 | 1_4:-44180278 | Msa0164660:intron |
| CTGATTCCAAGCATTAACAT+TGG | 0.568778 | 1_4:+44180629 | None:intergenic |
| AGAAAATGTCATTGCAAAAG+TGG | 0.570665 | 1_4:+44179045 | None:intergenic |
| ATTCCAAGTCCAATGAATAG+TGG | 0.572626 | 1_4:+44179236 | None:intergenic |
| AAAAGAGTTATAGCTTCCAA+AGG | 0.579010 | 1_4:-44179371 | Msa0164660:CDS |
| TTAATGCTTGGAATCAGTCT+TGG | 0.581697 | 1_4:-44180623 | Msa0164660:CDS |
| AGTCAATCACAGGAAGGTCA+AGG | 0.596559 | 1_4:+44180675 | None:intergenic |
| GAATGGGAAAACGTTTCAGA+AGG | 0.599938 | 1_4:+44178996 | None:intergenic |
| GTCAATCACAGGAAGGTCAA+GGG | 0.619378 | 1_4:+44180676 | None:intergenic |
| AGAATTAAGGTACCTGAGGA+GGG | 0.621634 | 1_4:+44179213 | None:intergenic |
| TGGTAACTTATGTGCGTACG+GGG | 0.625809 | 1_4:-44178277 | Msa0164660:CDS |
| TACATGATGATGGCTATGCA+TGG | 0.626660 | 1_4:-44188088 | Msa0164660:CDS |
| TACACATGATCTTCAAGAAG+GGG | 0.631347 | 1_4:-44179948 | Msa0164660:CDS |
| CCAGCTTCCAATGAGACCAA+AGG | 0.634848 | 1_4:-44187935 | Msa0164660:CDS |
| CCAACAATTAGGGTAAGCAT+GGG | 0.643147 | 1_4:+44187480 | None:intergenic |
| AATCATAGTCAATCACAGGA+AGG | 0.653054 | 1_4:+44180669 | None:intergenic |
| ATAATTGCTGGAATAATCGG+TGG | 0.658335 | 1_4:-44179293 | Msa0164660:CDS |
| CTTGAAAACAAAGAGTACAT+GGG | 0.660526 | 1_4:-44178303 | Msa0164660:CDS |
| TGTGAAGTCATGATTACAGG+TGG | 0.702559 | 1_4:-44180743 | Msa0164660:intron |
| TATCAAAAGTACTACATGTG+TGG | 0.725348 | 1_4:-44178171 | Msa0164660:three_prime_UTR |
| AGCTTCCAATGAGACCAAAG+GGG | 0.761463 | 1_4:-44187933 | Msa0164660:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATA+TGG | - | chr1_4:44178290-44178309 | Msa0164660:CDS | 0.0% |
| !! | AAAAAAAAAATCAAAGAATA+AGG | + | chr1_4:44178748-44178767 | None:intergenic | 10.0% |
| !!! | TCTTTGATTTTTTTTTTTTT+TGG | - | chr1_4:44178751-44178770 | Msa0164660:intron | 10.0% |
| !!! | CTTTGATTTTTTTTTTTTTT+GGG | - | chr1_4:44178752-44178771 | Msa0164660:intron | 10.0% |
| !!! | ATATTATTTTTATATTGCTT+TGG | + | chr1_4:44179129-44179148 | None:intergenic | 10.0% |
| !!! | ATATCACAATTAAATAATTT+TGG | + | chr1_4:44179245-44179264 | None:intergenic | 10.0% |
| !!! | CTTAATTATATCTAATTTTA+TGG | + | chr1_4:44179293-44179312 | None:intergenic | 10.0% |
| !!! | AATAAAATTAATTTTTTGAG+AGG | - | chr1_4:44179397-44179416 | Msa0164660:CDS | 10.0% |
| !!! | TTATTATTAGCTTTTTTTAT+CGG | - | chr1_4:44179484-44179503 | Msa0164660:intron | 10.0% |
| !! | TTATAAAGTAGTAAAATTTA+GGG | + | chr1_4:44179754-44179773 | None:intergenic | 10.0% |
| !! | TTTATAAAGTAGTAAAATTT+AGG | + | chr1_4:44179755-44179774 | None:intergenic | 10.0% |
| !!! | ATGTTAATACTTTTTTTTTT+TGG | + | chr1_4:44180483-44180502 | None:intergenic | 10.0% |
| !! | AGTAAAAATATGAAATTATA+GGG | + | chr1_4:44181217-44181236 | None:intergenic | 10.0% |
| !! | AAGTAAAAATATGAAATTAT+AGG | + | chr1_4:44181218-44181237 | None:intergenic | 10.0% |
| !!! | ATAATTTCATATTTTTACTT+TGG | - | chr1_4:44181218-44181237 | Msa0164660:intron | 10.0% |
| !!! | CTATAAAAAAAATCAATTTT+AGG | - | chr1_4:44181498-44181517 | Msa0164660:intron | 10.0% |
| !! | TTAATAAAAAAATGAGAAAA+AGG | + | chr1_4:44181669-44181688 | None:intergenic | 10.0% |
| !!! | CTCTTTTATTAATTATATTA+AGG | + | chr1_4:44183337-44183356 | None:intergenic | 10.0% |
| !!! | TAAATAAAATAAAAAAGTAC+TGG | - | chr1_4:44183592-44183611 | Msa0164660:intron | 10.0% |
| !!! | AAATAAAATAAAAAAGTACT+GGG | - | chr1_4:44183593-44183612 | Msa0164660:intron | 10.0% |
| !!! | TTGTTTCATATTTTATAATA+GGG | + | chr1_4:44183701-44183720 | None:intergenic | 10.0% |
| !! | CTTTATAATTTAAATATCAA+TGG | + | chr1_4:44183834-44183853 | None:intergenic | 10.0% |
| !!! | ATGAATTTATTTTTCTTAAA+TGG | - | chr1_4:44183856-44183875 | Msa0164660:intron | 10.0% |
| !! | TAGTACATATTTAATTATTA+AGG | - | chr1_4:44183938-44183957 | Msa0164660:intron | 10.0% |
| !! | AGTACATATTTAATTATTAA+GGG | - | chr1_4:44183939-44183958 | Msa0164660:intron | 10.0% |
| !!! | AACTTTTTTAATAATATACT+TGG | - | chr1_4:44184501-44184520 | Msa0164660:intron | 10.0% |
| !! | GACAAAAATAAAAATAATTT+AGG | - | chr1_4:44184523-44184542 | Msa0164660:intron | 10.0% |
| !! | TAGAAAAAATATATATATGT+TGG | + | chr1_4:44186293-44186312 | None:intergenic | 10.0% |
| !!! | AAATGTAAGTAATTATTTTT+TGG | - | chr1_4:44187703-44187722 | Msa0164660:intron | 10.0% |
| !! | TATATTTATATACATGATGA+TGG | - | chr1_4:44178034-44178053 | Msa0164660:three_prime_UTR | 15.0% |
| !!! | ATTTAAATGCATTTTTCTAA+AGG | + | chr1_4:44178821-44178840 | None:intergenic | 15.0% |
| !! | AAATGCATTTAAATTATGTT+AGG | - | chr1_4:44178827-44178846 | Msa0164660:CDS | 15.0% |
| !!! | TTTTTTTCTTTGTGAAAAAA+CGG | - | chr1_4:44179203-44179222 | Msa0164660:intron | 15.0% |
| !!! | TGTTTTTTTTTTTTTTAAGG+AGG | - | chr1_4:44179518-44179537 | Msa0164660:intron | 15.0% |
| !! | AATAAAATGAAAACTAACTA+AGG | + | chr1_4:44179705-44179724 | None:intergenic | 15.0% |
| !!! | TAGTTAGTTTTCATTTTATT+TGG | - | chr1_4:44179705-44179724 | Msa0164660:intron | 15.0% |
| !! | TATAAAGTAGTAAAATTTAG+GGG | + | chr1_4:44179753-44179772 | None:intergenic | 15.0% |
| !!! | TAATCATTACATTTTTTGTA+AGG | - | chr1_4:44180245-44180264 | Msa0164660:intron | 15.0% |
| !!! | AATACTTTTTTTTTTTGGTT+TGG | + | chr1_4:44180478-44180497 | None:intergenic | 15.0% |
| !!! | GTATTAACATCAATTATTTT+TGG | - | chr1_4:44180493-44180512 | Msa0164660:intron | 15.0% |
| !!! | AATAAGATACGTTTTTTTTA+GGG | + | chr1_4:44180719-44180738 | None:intergenic | 15.0% |
| !!! | AAATAAGATACGTTTTTTTT+AGG | + | chr1_4:44180720-44180739 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTACAACTCAAT+AGG | - | chr1_4:44180794-44180813 | Msa0164660:intron | 15.0% |
| !! | GAAGATCTATAAAATAAAAA+AGG | + | chr1_4:44180840-44180859 | None:intergenic | 15.0% |
| !! | ATAAGATGATATATTTGATA+GGG | + | chr1_4:44180887-44180906 | None:intergenic | 15.0% |
| !! | TATAAGATGATATATTTGAT+AGG | + | chr1_4:44180888-44180907 | None:intergenic | 15.0% |
| !! | TATACATATAAAGGAATAAT+CGG | + | chr1_4:44180954-44180973 | None:intergenic | 15.0% |
| !! | ATATGAACTTATACATATAA+AGG | + | chr1_4:44180963-44180982 | None:intergenic | 15.0% |
| !!! | AATTTTAAAATGAAATGTCA+AGG | - | chr1_4:44181016-44181035 | Msa0164660:intron | 15.0% |
| !! | CAATATTAAGATGATAAATT+AGG | - | chr1_4:44181126-44181145 | Msa0164660:intron | 15.0% |
| !! | GGTATTAAAATAAGTTAATT+TGG | + | chr1_4:44181292-44181311 | None:intergenic | 15.0% |
| !! | TATTAAAAATTAGTGTTAAC+TGG | - | chr1_4:44181358-44181377 | Msa0164660:intron | 15.0% |
| !!! | AATGTATATTACATTTTGAT+TGG | + | chr1_4:44181440-44181459 | None:intergenic | 15.0% |
| !! | AATCAAAATGTAATATACAT+TGG | - | chr1_4:44181439-44181458 | Msa0164660:intron | 15.0% |
| !! | GTTACAAATAAATAAGATAA+AGG | + | chr1_4:44181579-44181598 | None:intergenic | 15.0% |
| !! | TAACATTAATTCATGATATT+TGG | + | chr1_4:44181845-44181864 | None:intergenic | 15.0% |
| !!! | CTTATTTTTTTGTAACAATT+TGG | + | chr1_4:44182445-44182464 | None:intergenic | 15.0% |
| !! | GTTACAAAAAAATAAGATAA+AGG | - | chr1_4:44182449-44182468 | Msa0164660:intron | 15.0% |
| !!! | ATGTATATTTTAACATAAGA+GGG | + | chr1_4:44183408-44183427 | None:intergenic | 15.0% |
| !!! | AATGTATATTTTAACATAAG+AGG | + | chr1_4:44183409-44183428 | None:intergenic | 15.0% |
| !!! | AATAAAATAAAAAAGTACTG+GGG | - | chr1_4:44183594-44183613 | Msa0164660:intron | 15.0% |
| !!! | GTTGTTTCATATTTTATAAT+AGG | + | chr1_4:44183702-44183721 | None:intergenic | 15.0% |
| !! | TTACTAAATACAGTAAAATA+TGG | - | chr1_4:44183743-44183762 | Msa0164660:intron | 15.0% |
| !!! | AATTTATTTTTCTTAAATGG+TGG | - | chr1_4:44183859-44183878 | Msa0164660:intron | 15.0% |
| !!! | AGTGTAGATTTTATTTTTAA+AGG | - | chr1_4:44183997-44184016 | Msa0164660:intron | 15.0% |
| !!! | GTGTAGATTTTATTTTTAAA+GGG | - | chr1_4:44183998-44184017 | Msa0164660:intron | 15.0% |
| !! | AAAAGTTAATCTTAATCATA+AGG | + | chr1_4:44184102-44184121 | None:intergenic | 15.0% |
| !! | TATTATTAAAAAAGTTGACT+AGG | + | chr1_4:44184497-44184516 | None:intergenic | 15.0% |
| !! | TGTATATCTTAACATAAAAA+AGG | + | chr1_4:44184881-44184900 | None:intergenic | 15.0% |
| !!! | AAATTAAGATTCAATTTTGT+AGG | + | chr1_4:44185617-44185636 | None:intergenic | 15.0% |
| !!! | AGATTTTATGAAAAAGAAAA+GGG | + | chr1_4:44186950-44186969 | None:intergenic | 15.0% |
| !!! | TAGATTTTATGAAAAAGAAA+AGG | + | chr1_4:44186951-44186970 | None:intergenic | 15.0% |
| !! | TATATTACATGTTAGAAAAT+TGG | + | chr1_4:44188066-44188085 | None:intergenic | 15.0% |
| !!! | AAGTATTTTATAAACACACT+TGG | - | chr1_4:44178237-44178256 | Msa0164660:three_prime_UTR | 20.0% |
| !! | TAGGATTATATATGATTATG+TGG | - | chr1_4:44178494-44178513 | Msa0164660:intron | 20.0% |
| !! | ATAGTTCAAATCAAAGAATA+AGG | + | chr1_4:44178785-44178804 | None:intergenic | 20.0% |
| !!! | TTTTTTCTTTGTGAAAAAAC+GGG | - | chr1_4:44179204-44179223 | Msa0164660:intron | 20.0% |
| !!! | TTAAATAATTTTGGTAAGCA+TGG | + | chr1_4:44179236-44179255 | None:intergenic | 20.0% |
| !! | AATTAAGAATAAGAGAAAAG+CGG | - | chr1_4:44179306-44179325 | Msa0164660:CDS | 20.0% |
| !!! | AAAAATATCTATCTTTTCAC+TGG | - | chr1_4:44179366-44179385 | Msa0164660:CDS | 20.0% |
| !!! | TTCTTGAAGATTTTTTTTTG+AGG | - | chr1_4:44179450-44179469 | Msa0164660:intron | 20.0% |
| !!! | TCTTGAAGATTTTTTTTTGA+GGG | - | chr1_4:44179451-44179470 | Msa0164660:intron | 20.0% |
| !! | ATAAAGTAGTAAAATTTAGG+GGG | + | chr1_4:44179752-44179771 | None:intergenic | 20.0% |
| !!! | ATTTCCCTATATTTTTTTCA+CGG | + | chr1_4:44179853-44179872 | None:intergenic | 20.0% |
| !!! | TCAAGGAATGTTATATTTTT+GGG | + | chr1_4:44180053-44180072 | None:intergenic | 20.0% |
| !!! | TTCAAGGAATGTTATATTTT+TGG | + | chr1_4:44180054-44180073 | None:intergenic | 20.0% |
| !! | TTAGAATTAAGTGAATAAGT+GGG | - | chr1_4:44180334-44180353 | Msa0164660:intron | 20.0% |
| !!! | TTTTGTTGTTAGTTTTTATC+AGG | - | chr1_4:44180613-44180632 | Msa0164660:CDS | 20.0% |
| !! | AGATAACTCAATAAATTTAG+AGG | + | chr1_4:44180663-44180682 | None:intergenic | 20.0% |
| !! | TAAGATGATATATTTGATAG+GGG | + | chr1_4:44180886-44180905 | None:intergenic | 20.0% |
| !! | TATAGACAAGATTACATTAT+AGG | - | chr1_4:44181552-44181571 | Msa0164660:intron | 20.0% |
| !! | CTTATTTATTTGTAACACTT+TGG | - | chr1_4:44181583-44181602 | Msa0164660:intron | 20.0% |
| !! | ACGGAAAAAAATAAAGATAA+AGG | + | chr1_4:44181610-44181629 | None:intergenic | 20.0% |
| !!! | ATCTTTATTTTTTTCCGTTT+AGG | - | chr1_4:44181612-44181631 | Msa0164660:intron | 20.0% |
| !!! | AACTAAATCTCTTTTCTATA+GGG | + | chr1_4:44181907-44181926 | None:intergenic | 20.0% |
| !!! | AAACTAAATCTCTTTTCTAT+AGG | + | chr1_4:44181908-44181927 | None:intergenic | 20.0% |
| !! | TAACATTAATTCACGATATT+TGG | - | chr1_4:44182188-44182207 | Msa0164660:intron | 20.0% |
| !! | ATCTTGCCTTAATTATATTT+AGG | - | chr1_4:44182484-44182503 | Msa0164660:intron | 20.0% |
| !! | TGAACACCTAAATATAATTA+AGG | + | chr1_4:44182493-44182512 | None:intergenic | 20.0% |
| !! | GAATGTAATCGATAAATTTA+AGG | + | chr1_4:44182591-44182610 | None:intergenic | 20.0% |
| !! | CAAAATTGAACAATCAAAAT+GGG | + | chr1_4:44183096-44183115 | None:intergenic | 20.0% |
| !! | ACAAAATTGAACAATCAAAA+TGG | + | chr1_4:44183095-44183114 | None:intergenic | 20.0% |
| !!! | CTTTTTGATTTGATTTTTCT+TGG | - | chr1_4:44182766-44182785 | Msa0164660:intron | 20.0% |
| !! | ACAAAATTGAACAATCAAAA+TGG | - | chr1_4:44183095-44183114 | Msa0164660:intron | 20.0% |
| !! | CAAAATTGAACAATCAAAAT+GGG | - | chr1_4:44183096-44183115 | Msa0164660:intron | 20.0% |
| !!! | TGTATATTTTAACATAAGAG+GGG | + | chr1_4:44184028-44184047 | None:intergenic | 20.0% |
| !!! | TTCTAATATGTTTGGAATAA+GGG | + | chr1_4:44183440-44183459 | None:intergenic | 20.0% |
| !!! | TTTCTAATATGTTTGGAATA+AGG | + | chr1_4:44183441-44183460 | None:intergenic | 20.0% |
| !!! | GAAATGTTTTCTAATATGTT+TGG | + | chr1_4:44183448-44183467 | None:intergenic | 20.0% |
| !!! | ATAAAATAAAAAAGTACTGG+GGG | - | chr1_4:44183595-44183614 | Msa0164660:intron | 20.0% |
| !! | ATATTTAATTATTAAGGGAG+AGG | - | chr1_4:44183944-44183963 | Msa0164660:intron | 20.0% |
| !! | TATTTAATTATTAAGGGAGA+GGG | - | chr1_4:44183945-44183964 | Msa0164660:intron | 20.0% |
| !!! | TAGATTTTATTTTTAAAGGG+AGG | - | chr1_4:44184001-44184020 | Msa0164660:intron | 20.0% |
| !!! | AGATTTTATTTTTAAAGGGA+GGG | - | chr1_4:44184002-44184021 | Msa0164660:intron | 20.0% |
| !!! | TGTATATTTTAACATAAGAG+TGG | - | chr1_4:44184028-44184047 | Msa0164660:intron | 20.0% |
| !!! | TATGCATATTACATTTTGAT+TGG | - | chr1_4:44184169-44184188 | Msa0164660:intron | 20.0% |
| !! | CATCATAAAAAATTGTGATA+TGG | - | chr1_4:44184427-44184446 | Msa0164660:intron | 20.0% |
| !!! | TACTTTAAAAAATGTTGACT+CGG | + | chr1_4:44184457-44184476 | None:intergenic | 20.0% |
| !! | AAGATAAAAATGACTATGTA+GGG | + | chr1_4:44185119-44185138 | None:intergenic | 20.0% |
| !! | CTCTATTAAATTACCTAATA+TGG | - | chr1_4:44185333-44185352 | Msa0164660:intron | 20.0% |
| !!! | TTTTTACCAGAACTAAATTT+TGG | + | chr1_4:44185948-44185967 | None:intergenic | 20.0% |
| !! | AAATATATATATGTTGGACA+TGG | + | chr1_4:44186287-44186306 | None:intergenic | 20.0% |
| !! | TTAATTCTATATTGTTCATG+TGG | - | chr1_4:44186815-44186834 | Msa0164660:intron | 20.0% |
| !!! | GATTGAAGAATTTTCTATTA+AGG | - | chr1_4:44187049-44187068 | Msa0164660:intron | 20.0% |
| !!! | TATGTCTTGTTTTGTTAAAA+TGG | - | chr1_4:44187443-44187462 | Msa0164660:intron | 20.0% |
| !!! | CTAAAATGAATTTGTTTAAG+TGG | - | chr1_4:44187520-44187539 | Msa0164660:CDS | 20.0% |
| !! | GCATATCAAATCTAATTAAA+AGG | - | chr1_4:44187806-44187825 | Msa0164660:intron | 20.0% |
| ! | TGAATATTGAAAACACTTAC+CGG | + | chr1_4:44178263-44178282 | None:intergenic | 25.0% |
| !!! | AAGTAGTATTGAGATCTTTT+AGG | - | chr1_4:44178475-44178494 | Msa0164660:intron | 25.0% |
| ! | TTGGAATTGTTTAAATCACA+AGG | + | chr1_4:44179110-44179129 | None:intergenic | 25.0% |
| !! | TTTTTCTTTGTGAAAAAACG+GGG | - | chr1_4:44179205-44179224 | Msa0164660:intron | 25.0% |
| !!! | TCTTTATTCCTTGTTTTTTC+TGG | - | chr1_4:44179600-44179619 | Msa0164660:intron | 25.0% |
| ! | AAAACTAACTAAGGAAAAGA+AGG | + | chr1_4:44179696-44179715 | None:intergenic | 25.0% |
| !!! | TTTCCCTATATTTTTTTCAC+GGG | + | chr1_4:44179852-44179871 | None:intergenic | 25.0% |
| ! | ATTGGTTAAGGATATGAAAA+AGG | - | chr1_4:44179894-44179913 | Msa0164660:intron | 25.0% |
| !! | TCAAAAACAGTTTCCTTTTA+TGG | - | chr1_4:44179969-44179988 | Msa0164660:CDS | 25.0% |
| ! | AGGTTAAGCATATCATAAAA+GGG | + | chr1_4:44180003-44180022 | None:intergenic | 25.0% |
| !!! | TTTTTTGTAAGGTAGTCTAA+TGG | - | chr1_4:44180222-44180241 | Msa0164660:intron | 25.0% |
| !!! | TTTTTTGTAAGGTAGTCTAA+TGG | - | chr1_4:44180222-44180241 | Msa0164660:intron | 25.0% |
| ! | GTTAGAATTAAGTGAATAAG+TGG | - | chr1_4:44180333-44180352 | Msa0164660:intron | 25.0% |
| ! | TAGAATTAAGTGAATAAGTG+GGG | - | chr1_4:44180335-44180354 | Msa0164660:intron | 25.0% |
| ! | TATTGAGTTATCTCTAAATC+AGG | - | chr1_4:44180670-44180689 | Msa0164660:CDS | 25.0% |
| !! | TAGATCTTCTTTGTTGTATT+TGG | - | chr1_4:44180851-44180870 | Msa0164660:intron | 25.0% |
| ! | TATCATCTTATATGCTTAAG+AGG | - | chr1_4:44180896-44180915 | Msa0164660:intron | 25.0% |
| ! | TAGGTAAAAATAATCGGATT+AGG | + | chr1_4:44180929-44180948 | None:intergenic | 25.0% |
| !! | TCGGATTAGGTAAAAATAAT+CGG | + | chr1_4:44180935-44180954 | None:intergenic | 25.0% |
| ! | TATAAAGGAATAATCGGATT+AGG | + | chr1_4:44180948-44180967 | None:intergenic | 25.0% |
| !! | TCTGGAATATAAGTCAAATA+TGG | - | chr1_4:44181168-44181187 | Msa0164660:intron | 25.0% |
| ! | TGTGTTTAAAAGAAGATTTG+AGG | + | chr1_4:44182159-44182178 | None:intergenic | 25.0% |
| !!! | TTTTGAGGTTATTTTTATGC+CGG | + | chr1_4:44182006-44182025 | None:intergenic | 25.0% |
| ! | TACAAAAGTTAAGATTGTTC+TGG | + | chr1_4:44182063-44182082 | None:intergenic | 25.0% |
| ! | TTAATTTCACAAATGTTGCA+AGG | + | chr1_4:44182127-44182146 | None:intergenic | 25.0% |
| ! | TTGCAACATTTGTGAAATTA+AGG | - | chr1_4:44182126-44182145 | Msa0164660:intron | 25.0% |
| ! | TGTGTTTAAAAGAAGATTTG+AGG | - | chr1_4:44182159-44182178 | Msa0164660:intron | 25.0% |
| !!! | TATCTTTATTTTTCCCGTTT+AGG | + | chr1_4:44182417-44182436 | None:intergenic | 25.0% |
| ! | ATTAAGGCAAGATTACATTA+GGG | + | chr1_4:44182477-44182496 | None:intergenic | 25.0% |
| ! | AATTAAGGCAAGATTACATT+AGG | + | chr1_4:44182478-44182497 | None:intergenic | 25.0% |
| ! | ATTAATTTACACTACAAGAC+TGG | - | chr1_4:44182519-44182538 | Msa0164660:intron | 25.0% |
| ! | AAGTCATCTGTTATACTTTA+AGG | - | chr1_4:44182819-44182838 | Msa0164660:intron | 25.0% |
| ! | AGAAACAAGAATTGATCAAT+AGG | - | chr1_4:44183132-44183151 | Msa0164660:intron | 25.0% |
| ! | GAAACAAGAATTGATCAATA+GGG | - | chr1_4:44183133-44183152 | Msa0164660:intron | 25.0% |
| ! | GAATGTAAGTGATGAATTTA+AGG | - | chr1_4:44183233-44183252 | Msa0164660:intron | 25.0% |
| ! | TACATCAAATTTCTTTCATC+TGG | + | chr1_4:44183263-44183282 | None:intergenic | 25.0% |
| ! | TGTAATTCAAGAATCTTTGA+GGG | + | chr1_4:44183377-44183396 | None:intergenic | 25.0% |
| !! | TCTAATATGTTTGGAATAAG+GGG | + | chr1_4:44183439-44183458 | None:intergenic | 25.0% |
| !!! | GATTTTAACATAAGAAGAGA+GGG | + | chr1_4:44183506-44183525 | None:intergenic | 25.0% |
| !!! | AGATTTTAACATAAGAAGAG+AGG | + | chr1_4:44183507-44183526 | None:intergenic | 25.0% |
| ! | TTGTAATTCAAGCATCTTAT+AGG | - | chr1_4:44183968-44183987 | Msa0164660:intron | 25.0% |
| ! | TGTAATTCAAGCATCTTATA+GGG | - | chr1_4:44183969-44183988 | Msa0164660:intron | 25.0% |
| !!! | ATATTTTAACATAAGAGTGG+AGG | - | chr1_4:44184031-44184050 | Msa0164660:intron | 25.0% |
| !!! | TATTTTAACATAAGAGTGGA+GGG | - | chr1_4:44184032-44184051 | Msa0164660:intron | 25.0% |
| ! | TGGTGTATATATGTGAAAAT+TGG | - | chr1_4:44184686-44184705 | Msa0164660:intron | 25.0% |
| ! | GGTGTATATATGTGAAAATT+GGG | - | chr1_4:44184687-44184706 | Msa0164660:intron | 25.0% |
| ! | CAAGAAAATAAGATAGGAAT+TGG | + | chr1_4:44184768-44184787 | None:intergenic | 25.0% |
| !!! | CAATTCCTATCTTATTTTCT+TGG | - | chr1_4:44184766-44184785 | Msa0164660:intron | 25.0% |
| ! | TATCTTACTTTGAACTAGAT+GGG | + | chr1_4:44184911-44184930 | None:intergenic | 25.0% |
| !!! | ATGCGGTTTTAAGATATTTT+TGG | + | chr1_4:44184941-44184960 | None:intergenic | 25.0% |
| ! | CAAGATAAAAATGACTATGT+AGG | + | chr1_4:44185120-44185139 | None:intergenic | 25.0% |
| ! | AATATCAAGATCAACCAAAA+AGG | - | chr1_4:44185236-44185255 | Msa0164660:intron | 25.0% |
| !! | ATGTTATATTGGTTAGAAAG+AGG | + | chr1_4:44185270-44185289 | None:intergenic | 25.0% |
| ! | ATATGCATTCAATCCATATT+AGG | + | chr1_4:44185349-44185368 | None:intergenic | 25.0% |
| ! | TATGTGTTTGTTTGTTTGTT+TGG | - | chr1_4:44185366-44185385 | Msa0164660:intron | 25.0% |
| !! | TTGCTAATCATATTTTTCAC+TGG | - | chr1_4:44185575-44185594 | Msa0164660:intron | 25.0% |
| ! | TATCGAAAACTACATCAATA+TGG | + | chr1_4:44185665-44185684 | None:intergenic | 25.0% |
| !! | TTGATGTAGTTTTCGATATA+TGG | - | chr1_4:44185667-44185686 | Msa0164660:intron | 25.0% |
| !! | TGATGTAGTTTTCGATATAT+GGG | - | chr1_4:44185668-44185687 | Msa0164660:intron | 25.0% |
| ! | AAAAGAAACCCTAATTAAGA+AGG | - | chr1_4:44185739-44185758 | Msa0164660:intron | 25.0% |
| ! | TTAAGCAACCTTCTTAATTA+GGG | + | chr1_4:44185750-44185769 | None:intergenic | 25.0% |
| ! | TTTAAGCAACCTTCTTAATT+AGG | + | chr1_4:44185751-44185770 | None:intergenic | 25.0% |
| ! | AAGGACAATTCACAATTAAA+TGG | - | chr1_4:44185873-44185892 | Msa0164660:intron | 25.0% |
| ! | ATTCACTTGTCACTAAATTT+AGG | - | chr1_4:44185985-44186004 | Msa0164660:intron | 25.0% |
| ! | TTCACTTGTCACTAAATTTA+GGG | - | chr1_4:44185986-44186005 | Msa0164660:intron | 25.0% |
| ! | ACATAATGTATAGAAAATGC+AGG | + | chr1_4:44186092-44186111 | None:intergenic | 25.0% |
| !! | TTTTCTTGGTAGATTAGTAT+TGG | + | chr1_4:44186231-44186250 | None:intergenic | 25.0% |
| ! | TACTAATCTACCAAGAAAAA+AGG | - | chr1_4:44186232-44186251 | Msa0164660:intron | 25.0% |
| ! | CTGTTATTGAGAATGTTTAT+TGG | - | chr1_4:44186349-44186368 | Msa0164660:intron | 25.0% |
| ! | TATTGAGAATGTTTATTGGA+AGG | - | chr1_4:44186353-44186372 | Msa0164660:intron | 25.0% |
| ! | ATCTACTTCAGGTATATATA+TGG | - | chr1_4:44186596-44186615 | Msa0164660:intron | 25.0% |
| !! | TGAAGAATTTTCTATTAAGG+TGG | - | chr1_4:44187052-44187071 | Msa0164660:intron | 25.0% |
| ! | TTGTTAAAATGGAGATACAA+AGG | - | chr1_4:44187454-44187473 | Msa0164660:CDS | 25.0% |
| !! | ATAGTGAGAGAAAAAAGTTT+TGG | - | chr1_4:44187595-44187614 | Msa0164660:intron | 25.0% |
| !! | ACATTTGAAGTAAACAAACA+AGG | + | chr1_4:44187689-44187708 | None:intergenic | 25.0% |
| !!! | TTTTTTTCCCTTCAAATTAC+AGG | - | chr1_4:44187775-44187794 | Msa0164660:intron | 25.0% |
| ! | ATCAATATGTGTAAAACTTG+AGG | - | chr1_4:44187895-44187914 | Msa0164660:CDS | 25.0% |
| ! | TTAGAAAATTGGAACTAAGT+TGG | + | chr1_4:44188055-44188074 | None:intergenic | 25.0% |
| TATGCATGGATCAAAAAGAA+GGG | - | chr1_4:44178058-44178077 | Msa0164660:three_prime_UTR | 30.0% | |
| AAAAAGAAGGGACATGAAAT+GGG | - | chr1_4:44178070-44178089 | Msa0164660:three_prime_UTR | 30.0% | |
| ! | ATTTTATAAACACACTTGGC+CGG | - | chr1_4:44178241-44178260 | Msa0164660:three_prime_UTR | 30.0% |
| ! | TTTTGAACTGATGATCTTTG+TGG | - | chr1_4:44178518-44178537 | Msa0164660:intron | 30.0% |
| TTTGGTTGGAGAATTATAGT+AGG | - | chr1_4:44178559-44178578 | Msa0164660:intron | 30.0% | |
| ATTATAGTAGGCACCATAAT+TGG | - | chr1_4:44178571-44178590 | Msa0164660:intron | 30.0% | |
| TGATCCTAGAAATCCAATTA+TGG | + | chr1_4:44178587-44178606 | None:intergenic | 30.0% | |
| TGCATCAAATCCAACAATTA+GGG | + | chr1_4:44178665-44178684 | None:intergenic | 30.0% | |
| TTGCATCAAATCCAACAATT+AGG | + | chr1_4:44178666-44178685 | None:intergenic | 30.0% | |
| ATAGCATTCTGAATGTTATG+AGG | + | chr1_4:44178921-44178940 | None:intergenic | 30.0% | |
| GTTAGTTGAGAGATCTTATT+TGG | - | chr1_4:44179169-44179188 | Msa0164660:intron | 30.0% | |
| TATGCGTGCAAGTAAATATT+TGG | - | chr1_4:44179570-44179589 | Msa0164660:CDS | 30.0% | |
| CCAATATTCCAGAAAAAACA+AGG | + | chr1_4:44179611-44179630 | None:intergenic | 30.0% | |
| !!! | CCTTGTTTTTTCTGGAATAT+TGG | - | chr1_4:44179608-44179627 | Msa0164660:intron | 30.0% |
| TAGTAAAATTTAGGGGGAAA+AGG | + | chr1_4:44179746-44179765 | None:intergenic | 30.0% | |
| TTCTCCCGTGAAAAAAATAT+AGG | - | chr1_4:44179845-44179864 | Msa0164660:intron | 30.0% | |
| TCTCCCGTGAAAAAAATATA+GGG | - | chr1_4:44179846-44179865 | Msa0164660:intron | 30.0% | |
| AAATATAGGGAAATGCTAAC+TGG | - | chr1_4:44179859-44179878 | Msa0164660:intron | 30.0% | |
| !! | AAGGGTATTGTTACCATAAA+AGG | + | chr1_4:44179985-44180004 | None:intergenic | 30.0% |
| CAGGTTAAGCATATCATAAA+AGG | + | chr1_4:44180004-44180023 | None:intergenic | 30.0% | |
| ACTTTCTCTCTAATTAAGCT+AGG | - | chr1_4:44180106-44180125 | Msa0164660:intron | 30.0% | |
| ! | CTTAAAAAGTTTGAAGCCTA+AGG | + | chr1_4:44180180-44180199 | None:intergenic | 30.0% |
| ! | CTTAGGCTTCAAACTTTTTA+AGG | - | chr1_4:44180178-44180197 | Msa0164660:intron | 30.0% |
| ! | GTTTTGTAAGGTAGTCTAAT+GGG | - | chr1_4:44180311-44180330 | Msa0164660:intron | 30.0% |
| !! | GTATTAGTGTTATTTGTCTC+TGG | - | chr1_4:44181150-44181169 | Msa0164660:intron | 30.0% |
| ! | ATTCATCAGTTTTCGTTTCA+GGG | + | chr1_4:44181267-44181286 | None:intergenic | 30.0% |
| ! | TATTCATCAGTTTTCGTTTC+AGG | + | chr1_4:44181268-44181287 | None:intergenic | 30.0% |
| TCATTTACATGAAACATGGA+TGG | + | chr1_4:44181317-44181336 | None:intergenic | 30.0% | |
| ATCCATGTTTCATGTAAATG+AGG | - | chr1_4:44181316-44181335 | Msa0164660:intron | 30.0% | |
| ! | TTGATTGGTTGATATCATGA+GGG | + | chr1_4:44184184-44184203 | None:intergenic | 30.0% |
| ! | TTTGATTGGTTGATATCATG+AGG | + | chr1_4:44184183-44184202 | None:intergenic | 30.0% |
| TGAGAGATAAAAGACCTAAA+CGG | + | chr1_4:44181629-44181648 | None:intergenic | 30.0% | |
| GTACATCTTCATCATATTTC+TGG | + | chr1_4:44181749-44181768 | None:intergenic | 30.0% | |
| GAAGATTCAAAGAAAGAAGA+TGG | + | chr1_4:44181779-44181798 | None:intergenic | 30.0% | |
| TCTAACTCAATATTCAAACC+CGG | - | chr1_4:44181984-44182003 | Msa0164660:intron | 30.0% | |
| !!! | TTTGAGGTTATTTTTATGCC+GGG | + | chr1_4:44182005-44182024 | None:intergenic | 30.0% |
| AGAAGATGATGAAGATTCAA+AGG | - | chr1_4:44182243-44182262 | Msa0164660:intron | 30.0% | |
| GAACATCTTCATCATATTTC+TGG | - | chr1_4:44182283-44182302 | Msa0164660:intron | 30.0% | |
| !! | TGTGCTTTTAAGAGAGATAA+AGG | - | chr1_4:44182390-44182409 | Msa0164660:intron | 30.0% |
| TTAAGGCAAGATTACATTAG+GGG | + | chr1_4:44182476-44182495 | None:intergenic | 30.0% | |
| CTCACGAAAATTGAAAAATG+CGG | + | chr1_4:44182662-44182681 | None:intergenic | 30.0% | |
| !! | TTTGATTTTTCTTGGTTGTG+AGG | - | chr1_4:44182774-44182793 | Msa0164660:intron | 30.0% |
| !! | GTTCTTTTGTTTGGACTTAA+AGG | - | chr1_4:44182932-44182951 | Msa0164660:intron | 30.0% |
| ! | GTTAGCAGATTTTATTAGGT+TGG | - | chr1_4:44182982-44183001 | Msa0164660:intron | 30.0% |
| CAATCAAAATGGGAAGATAA+TGG | - | chr1_4:44183106-44183125 | Msa0164660:intron | 30.0% | |
| GTAATTCAAGAATCTTTGAG+GGG | + | chr1_4:44183376-44183395 | None:intergenic | 30.0% | |
| GTGTAATTCAAGAATCTTTG+AGG | + | chr1_4:44183378-44183397 | None:intergenic | 30.0% | |
| !!! | TATTTTAACATAAGAGGGGA+GGG | + | chr1_4:44183403-44183422 | None:intergenic | 30.0% |
| !!! | ATATTTTAACATAAGAGGGG+AGG | + | chr1_4:44183404-44183423 | None:intergenic | 30.0% |
| GTAATTCAAGCTTCTCTTAA+GGG | + | chr1_4:44183479-44183498 | None:intergenic | 30.0% | |
| TGTAATTCAAGCTTCTCTTA+AGG | + | chr1_4:44183480-44183499 | None:intergenic | 30.0% | |
| !! | ATTTTAACATAAGAGTGGAG+GGG | - | chr1_4:44184033-44184052 | Msa0164660:intron | 30.0% |
| ! | TTTTTACCTGTCTATCATGA+AGG | - | chr1_4:44184298-44184317 | Msa0164660:intron | 30.0% |
| ! | TTTTACCTGTCTATCATGAA+GGG | - | chr1_4:44184299-44184318 | Msa0164660:intron | 30.0% |
| GTAAAGTTATTTAGTGCGAA+TGG | + | chr1_4:44184378-44184397 | None:intergenic | 30.0% | |
| ATAGTAAAGAGGAAGATGAT+TGG | + | chr1_4:44184567-44184586 | None:intergenic | 30.0% | |
| GGAAAAAGATGATAGTAAAG+AGG | + | chr1_4:44184578-44184597 | None:intergenic | 30.0% | |
| !! | GATAGGAATTGGAAAGTATT+TGG | + | chr1_4:44184757-44184776 | None:intergenic | 30.0% |
| CGGAAAATGTTAATTAGTAG+AGG | - | chr1_4:44184809-44184828 | Msa0164660:intron | 30.0% | |
| CTATCTTACTTTGAACTAGA+TGG | + | chr1_4:44184912-44184931 | None:intergenic | 30.0% | |
| GATATTCAACATATACCATG+AGG | + | chr1_4:44185222-44185241 | None:intergenic | 30.0% | |
| ! | AAGAGGAATTTTGTCCTTTT+TGG | + | chr1_4:44185253-44185272 | None:intergenic | 30.0% |
| TGTTGTAGCACATGTTATAT+TGG | + | chr1_4:44185281-44185300 | None:intergenic | 30.0% | |
| TTCAGTTAACGCTTTCTTAA+AGG | - | chr1_4:44185700-44185719 | Msa0164660:intron | 30.0% | |
| TCAGTTAACGCTTTCTTAAA+GGG | - | chr1_4:44185701-44185720 | Msa0164660:intron | 30.0% | |
| !! | AACTGTGCATTTTGATGATT+TGG | - | chr1_4:44185817-44185836 | Msa0164660:intron | 30.0% |
| ! | TTACCAGAACTAAATTTTGG+TGG | + | chr1_4:44185945-44185964 | None:intergenic | 30.0% |
| TAGAAAATGCAGGATTACTA+GGG | + | chr1_4:44186082-44186101 | None:intergenic | 30.0% | |
| ATAGAAAATGCAGGATTACT+AGG | + | chr1_4:44186083-44186102 | None:intergenic | 30.0% | |
| AAATTTGTGCCTCAGATATT+AGG | - | chr1_4:44186150-44186169 | Msa0164660:intron | 30.0% | |
| !!! | TTTCCTACTACCTTTTTTCT+TGG | + | chr1_4:44186245-44186264 | None:intergenic | 30.0% |
| AATGTTTATTGGAAGGAACT+TGG | - | chr1_4:44186360-44186379 | Msa0164660:intron | 30.0% | |
| ATGATACTTGCATTACAGAT+AGG | - | chr1_4:44186405-44186424 | Msa0164660:intron | 30.0% | |
| TACTCATGCATACAAGAATA+TGG | + | chr1_4:44186495-44186514 | None:intergenic | 30.0% | |
| TTGGATATTGAATCTACTTC+AGG | - | chr1_4:44186585-44186604 | Msa0164660:intron | 30.0% | |
| TATATATATGGCCTCAAAGT+TGG | - | chr1_4:44186608-44186627 | Msa0164660:intron | 30.0% | |
| ATATATATGGCCTCAAAGTT+GGG | - | chr1_4:44186609-44186628 | Msa0164660:intron | 30.0% | |
| !!! | TCTTTTTCCCTTGTTTTTTC+AGG | - | chr1_4:44186685-44186704 | Msa0164660:intron | 30.0% |
| ATAGGTACCTGAAAAAACAA+GGG | + | chr1_4:44186695-44186714 | None:intergenic | 30.0% | |
| TATAGGTACCTGAAAAAACA+AGG | + | chr1_4:44186696-44186715 | None:intergenic | 30.0% | |
| ! | GAGGCTATACTTTTATACAA+AGG | - | chr1_4:44186737-44186756 | Msa0164660:intron | 30.0% |
| AAAAGAGTTATAGCTTCCAA+AGG | - | chr1_4:44186761-44186780 | Msa0164660:intron | 30.0% | |
| ! | ATTTGTTTGTTGATCTCCTT+TGG | + | chr1_4:44186780-44186799 | None:intergenic | 30.0% |
| AAGGAGATCAACAAACAAAT+TGG | - | chr1_4:44186780-44186799 | Msa0164660:intron | 30.0% | |
| AGAAAATGTCATTGCAAAAG+TGG | + | chr1_4:44187090-44187109 | None:intergenic | 30.0% | |
| AGAAAGCTTATTGCCATATT+AGG | - | chr1_4:44187312-44187331 | Msa0164660:intron | 30.0% | |
| GAAAGCTTATTGCCATATTA+GGG | - | chr1_4:44187313-44187332 | Msa0164660:intron | 30.0% | |
| TGCTAGTCATAATTACAAAG+AGG | + | chr1_4:44187420-44187439 | None:intergenic | 30.0% | |
| ! | CTTGAAAACAAAGAGTACAT+GGG | - | chr1_4:44187829-44187848 | Msa0164660:intron | 30.0% |
| !!! | ATAGTTTTGTGTTGTCAAGT+TGG | - | chr1_4:44187938-44187957 | Msa0164660:CDS | 30.0% |
| !! | TATCAAAAGTACTACATGTG+TGG | - | chr1_4:44187961-44187980 | Msa0164660:CDS | 30.0% |
| ! | AAATCAGCATTTAGGACATA+CGG | - | chr1_4:44187988-44188007 | Msa0164660:CDS | 30.0% |
| CTATGCATGGATCAAAAAGA+AGG | - | chr1_4:44178057-44178076 | Msa0164660:three_prime_UTR | 35.0% | |
| CAAAAAGAAGGGACATGAAA+TGG | - | chr1_4:44178069-44178088 | Msa0164660:three_prime_UTR | 35.0% | |
| GACATGAAATGGGTAATTCT+CGG | - | chr1_4:44178080-44178099 | Msa0164660:three_prime_UTR | 35.0% | |
| !! | GGATTTCTAGGATCATCATT+TGG | - | chr1_4:44178592-44178611 | Msa0164660:intron | 35.0% |
| AATAAAATGCATGTGTGCTG+TGG | - | chr1_4:44178871-44178890 | Msa0164660:CDS | 35.0% | |
| TTCTGAATGTTATGAGGCAA+TGG | + | chr1_4:44178915-44178934 | None:intergenic | 35.0% | |
| AATAAGAGAAAAGCGGACAA+AGG | - | chr1_4:44179313-44179332 | Msa0164660:CDS | 35.0% | |
| AAGCTAGGTTTGATTATGAC+AGG | - | chr1_4:44180121-44180140 | Msa0164660:intron | 35.0% | |
| AGCTAGGTTTGATTATGACA+GGG | - | chr1_4:44180122-44180141 | Msa0164660:intron | 35.0% | |
| !!! | GGTAGTCTAATGGTTTTGTA+AGG | - | chr1_4:44180266-44180285 | Msa0164660:CDS | 35.0% |
| ! | GTTTTGTAAGGTAGTCTGTA+AGG | - | chr1_4:44180278-44180297 | Msa0164660:intron | 35.0% |
| TAGTCTGTAAGGTAGTCTAA+TGG | - | chr1_4:44180289-44180308 | Msa0164660:intron | 35.0% | |
| !!! | GGTAGTCTAATGGTTTTGTA+AGG | - | chr1_4:44180266-44180285 | Msa0164660:CDS | 35.0% |
| !! | GGTTTTGTAAGGTAGTCTAA+TGG | - | chr1_4:44180310-44180329 | Msa0164660:intron | 35.0% |
| TTACATGAAACATGGATGGT+TGG | + | chr1_4:44181313-44181332 | None:intergenic | 35.0% | |
| AGCCTCATTTACATGAAACA+TGG | + | chr1_4:44181321-44181340 | None:intergenic | 35.0% | |
| ! | ATTACCCTCTCTTGTTTAGA+GGG | - | chr1_4:44181391-44181410 | Msa0164660:intron | 35.0% |
| AATACCCTCTAAACAAGAGA+GGG | + | chr1_4:44181398-44181417 | None:intergenic | 35.0% | |
| AAATACCCTCTAAACAAGAG+AGG | + | chr1_4:44181399-44181418 | None:intergenic | 35.0% | |
| ! | TGATTGGTTGATATCATGAG+GGG | + | chr1_4:44184185-44184204 | None:intergenic | 35.0% |
| ATTTCACAAATGTTGCAAGG+AGG | + | chr1_4:44182124-44182143 | None:intergenic | 35.0% | |
| AGAGAGATAAAGGACCTAAA+CGG | - | chr1_4:44182400-44182419 | Msa0164660:intron | 35.0% | |
| ACGGTAATTCTCACGATATT+TGG | + | chr1_4:44182707-44182726 | None:intergenic | 35.0% | |
| !! | TGACATGGTTCTGGAAATAA+CGG | + | chr1_4:44182726-44182745 | None:intergenic | 35.0% |
| ! | ATACTTTAAGGATTGCTAGC+AGG | - | chr1_4:44182831-44182850 | Msa0164660:intron | 35.0% |
| !!! | GAGTTTGCTAGCATCTTTTT+CGG | - | chr1_4:44182876-44182895 | Msa0164660:intron | 35.0% |
| ! | GAGGCTTTTGTTCTTTTGTT+TGG | - | chr1_4:44182923-44182942 | Msa0164660:intron | 35.0% |
| TTGTTTGGACTTAAAGGCTT+TGG | - | chr1_4:44182938-44182957 | Msa0164660:intron | 35.0% | |
| ! | GCGTGTTAGCAGATTTTATT+AGG | - | chr1_4:44182978-44182997 | Msa0164660:intron | 35.0% |
| ! | AATTTGAAACTGCAGCAGTT+TGG | - | chr1_4:44183068-44183087 | Msa0164660:intron | 35.0% |
| !! | GATGTTTTTGTTCTCACGTT+CGG | - | chr1_4:44183185-44183204 | Msa0164660:intron | 35.0% |
| !! | ATGTTTTTGTTCTCACGTTC+GGG | - | chr1_4:44183186-44183205 | Msa0164660:intron | 35.0% |
| !! | ATTTTAACATAAGAGGGGAG+GGG | + | chr1_4:44183402-44183421 | None:intergenic | 35.0% |
| ! | TGATTGGTTGATATCATGAG+AGG | - | chr1_4:44184185-44184204 | Msa0164660:intron | 35.0% |
| ! | GATTGGTTGATATCATGAGA+GGG | - | chr1_4:44184186-44184205 | Msa0164660:intron | 35.0% |
| AATTACCCCTTAAACAAGAG+AGG | - | chr1_4:44184211-44184230 | Msa0164660:intron | 35.0% | |
| ATTACCCCTTAAACAAGAGA+GGG | - | chr1_4:44184212-44184231 | Msa0164660:intron | 35.0% | |
| CATTTGAGGAATACATGAAG+AGG | + | chr1_4:44184267-44184286 | None:intergenic | 35.0% | |
| CTCTTCATGTATTCCTCAAA+TGG | - | chr1_4:44184265-44184284 | Msa0164660:intron | 35.0% | |
| TTCATGTATTCCTCAAATGG+AGG | - | chr1_4:44184268-44184287 | Msa0164660:intron | 35.0% | |
| AAATATCACACCTCCATTTG+AGG | + | chr1_4:44184281-44184300 | None:intergenic | 35.0% | |
| AAAGAGGAAGATGATTGGAA+GGG | + | chr1_4:44184562-44184581 | None:intergenic | 35.0% | |
| TAAAGAGGAAGATGATTGGA+AGG | + | chr1_4:44184563-44184582 | None:intergenic | 35.0% | |
| AAGAGAAAGAAGTAGACGTA+AGG | + | chr1_4:44184663-44184682 | None:intergenic | 35.0% | |
| CTGGTCCAAGAAAATAAGAT+AGG | + | chr1_4:44184774-44184793 | None:intergenic | 35.0% | |
| !!! | ACCAGTGCATGCTTTTTTAT+CGG | - | chr1_4:44184789-44184808 | Msa0164660:intron | 35.0% |
| TCGGTAATCATGAAACACAT+TGG | + | chr1_4:44185182-44185201 | None:intergenic | 35.0% | |
| AATGTGTTTCATGATTACCG+AGG | - | chr1_4:44185181-44185200 | Msa0164660:intron | 35.0% | |
| ATTCAACATATACCATGAGG+TGG | + | chr1_4:44185219-44185238 | None:intergenic | 35.0% | |
| AATCATAGTCAATCACAGGA+AGG | + | chr1_4:44185466-44185485 | None:intergenic | 35.0% | |
| GCTAAATCATAGTCAATCAC+AGG | + | chr1_4:44185470-44185489 | None:intergenic | 35.0% | |
| TTCCAACCAATGTTAATGCT+TGG | - | chr1_4:44185497-44185516 | Msa0164660:intron | 35.0% | |
| TTCCAAGCATTAACATTGGT+TGG | + | chr1_4:44185502-44185521 | None:intergenic | 35.0% | |
| CTGATTCCAAGCATTAACAT+TGG | + | chr1_4:44185506-44185525 | None:intergenic | 35.0% | |
| TTAATGCTTGGAATCAGTCT+TGG | - | chr1_4:44185509-44185528 | Msa0164660:intron | 35.0% | |
| !! | TCAATCTCATTTTTCCTGAC+TGG | - | chr1_4:44185540-44185559 | Msa0164660:intron | 35.0% |
| AAAGTTGTTATCATCCAGTC+AGG | + | chr1_4:44185557-44185576 | None:intergenic | 35.0% | |
| ! | AGTTTTCGATATATGGGAAC+AGG | - | chr1_4:44185674-44185693 | Msa0164660:intron | 35.0% |
| !! | TCTTAAAGGGTGTTAACACT+TGG | - | chr1_4:44185714-44185733 | Msa0164660:intron | 35.0% |
| ! | TAGCCACCAAAATTTAGTTC+TGG | - | chr1_4:44185939-44185958 | Msa0164660:intron | 35.0% |
| ATCTTCTGTCCTAATATCTG+AGG | + | chr1_4:44186162-44186181 | None:intergenic | 35.0% | |
| CTACACATGATCTTCAAGAA+GGG | - | chr1_4:44186183-44186202 | Msa0164660:intron | 35.0% | |
| TACACATGATCTTCAAGAAG+GGG | - | chr1_4:44186184-44186203 | Msa0164660:intron | 35.0% | |
| CTACCAAGAAAAAAGGTAGT+AGG | - | chr1_4:44186239-44186258 | Msa0164660:intron | 35.0% | |
| AAAAGATGCCATGAATGTGT+AGG | - | chr1_4:44186323-44186342 | Msa0164660:intron | 35.0% | |
| AACAGAAACCTACACATTCA+TGG | + | chr1_4:44186334-44186353 | None:intergenic | 35.0% | |
| ! | TTGGACTTCTTTTCTCTGTT+TGG | - | chr1_4:44186379-44186398 | Msa0164660:intron | 35.0% |
| CTTGTATGCATGAGTAAACA+AGG | - | chr1_4:44186499-44186518 | Msa0164660:intron | 35.0% | |
| ! | CAACTTGCTCTGTGATATAT+TGG | - | chr1_4:44186566-44186585 | Msa0164660:intron | 35.0% |
| ATTCTTAAGACCCAACTTTG+AGG | + | chr1_4:44186622-44186641 | None:intergenic | 35.0% | |
| GGCATAATTGCTGGAATAAT+CGG | - | chr1_4:44186836-44186855 | Msa0164660:intron | 35.0% | |
| ATAATTGCTGGAATAATCGG+TGG | - | chr1_4:44186839-44186858 | Msa0164660:intron | 35.0% | |
| ATTCCAAGTCCAATGAATAG+TGG | + | chr1_4:44186899-44186918 | None:intergenic | 35.0% | |
| ! | GAAAAGGGTACGTAGAATTA+AGG | + | chr1_4:44186935-44186954 | None:intergenic | 35.0% |
| ! | ATTTTCTGCATCTATGTCTG+TGG | - | chr1_4:44187103-44187122 | Msa0164660:intron | 35.0% |
| ! | AAACGTTTTCCCATTCCATA+TGG | - | chr1_4:44187143-44187162 | Msa0164660:intron | 35.0% |
| ! | TTTTCCCATTCCATATGGTA+AGG | - | chr1_4:44187148-44187167 | Msa0164660:intron | 35.0% |
| TTTCCCATTCCATATGGTAA+GGG | - | chr1_4:44187149-44187168 | Msa0164660:intron | 35.0% | |
| ! | TTTTTCCTACCCTTACCATA+TGG | + | chr1_4:44187161-44187180 | None:intergenic | 35.0% |
| ATATGGTAAGGGTAGGAAAA+AGG | - | chr1_4:44187160-44187179 | Msa0164660:intron | 35.0% | |
| TATGGTAAGGGTAGGAAAAA+GGG | - | chr1_4:44187161-44187180 | Msa0164660:intron | 35.0% | |
| AGGGATTGTTACACTAAAAG+AGG | - | chr1_4:44187180-44187199 | Msa0164660:intron | 35.0% | |
| GGGATTGTTACACTAAAAGA+GGG | - | chr1_4:44187181-44187200 | Msa0164660:intron | 35.0% | |
| CACTAAAAGAGGGCAATAAT+TGG | - | chr1_4:44187191-44187210 | Msa0164660:intron | 35.0% | |
| AATTGAAGCTCTCCCTAATA+TGG | + | chr1_4:44187328-44187347 | None:intergenic | 35.0% | |
| TTTGTGAGTGGTATATCACT+AGG | - | chr1_4:44187375-44187394 | Msa0164660:intron | 35.0% | |
| ! | TTTTCCCTTCAAATTACAGG+TGG | - | chr1_4:44187778-44187797 | Msa0164660:intron | 35.0% |
| TGTTCCACCTGTAATTTGAA+GGG | + | chr1_4:44187785-44187804 | None:intergenic | 35.0% | |
| ! | GCTTGAAAACAAAGAGTACA+TGG | - | chr1_4:44187828-44187847 | Msa0164660:intron | 35.0% |
| ! | AACAAAGAGTACATGGGATT+TGG | - | chr1_4:44187835-44187854 | Msa0164660:intron | 35.0% |
| ! | TTTGGTAACTTATGTGCGTA+CGG | - | chr1_4:44187853-44187872 | Msa0164660:intron | 35.0% |
| !! | AAAAGTACTACATGTGTGGT+TGG | - | chr1_4:44187965-44187984 | Msa0164660:CDS | 35.0% |
| TGCATTCAAACACACGTTTA+AGG | + | chr1_4:44188030-44188049 | None:intergenic | 35.0% | |
| !! | TACATGATGATGGCTATGCA+TGG | - | chr1_4:44178044-44178063 | Msa0164660:three_prime_UTR | 40.0% |
| AGCATGAATATCAACCCCTT+TGG | + | chr1_4:44178216-44178235 | None:intergenic | 40.0% | |
| ATGATCTTTGTGGTGTATCC+AGG | - | chr1_4:44178528-44178547 | Msa0164660:intron | 40.0% | |
| TGATCTTTGTGGTGTATCCA+GGG | - | chr1_4:44178529-44178548 | Msa0164660:intron | 40.0% | |
| TGTATCCAGGGGATGAAATT+TGG | - | chr1_4:44178541-44178560 | Msa0164660:intron | 40.0% | |
| GGCACCATAATTGGATTTCT+AGG | - | chr1_4:44178580-44178599 | Msa0164660:intron | 40.0% | |
| CCAACAATTAGGGTAAGCAT+GGG | + | chr1_4:44178655-44178674 | None:intergenic | 40.0% | |
| TCCAACAATTAGGGTAAGCA+TGG | + | chr1_4:44178656-44178675 | None:intergenic | 40.0% | |
| TGAATGTTATGAGGCAATGG+AGG | + | chr1_4:44178912-44178931 | None:intergenic | 40.0% | |
| !!! | TATTTTTGGGTCCTGCTAAC+CGG | + | chr1_4:44180040-44180059 | None:intergenic | 40.0% |
| CATTGAGTTTCGGATGAGTT+GGG | + | chr1_4:44180079-44180098 | None:intergenic | 40.0% | |
| ACATTGAGTTTCGGATGAGT+TGG | + | chr1_4:44180080-44180099 | None:intergenic | 40.0% | |
| AACTCATCCGAAACTCAATG+TGG | - | chr1_4:44180079-44180098 | Msa0164660:intron | 40.0% | |
| ACTCATCCGAAACTCAATGT+GGG | - | chr1_4:44180080-44180099 | Msa0164660:intron | 40.0% | |
| AAGTGAATAAGTGGGGATTC+CGG | - | chr1_4:44180342-44180361 | Msa0164660:intron | 40.0% | |
| ! | GATTACCCTCTCTTGTTTAG+AGG | - | chr1_4:44181390-44181409 | Msa0164660:intron | 40.0% |
| ! | GATTGGTTGATATCATGAGG+GGG | + | chr1_4:44181423-44181442 | None:intergenic | 40.0% |
| ! | CAAAGCTGCTCTCAATTTTG+AGG | + | chr1_4:44182021-44182040 | None:intergenic | 40.0% |
| AAATGTTGCAAGGAGGATAG+TGG | + | chr1_4:44182117-44182136 | None:intergenic | 40.0% | |
| GAGAGATAAAGGACCTAAAC+GGG | - | chr1_4:44182401-44182420 | Msa0164660:intron | 40.0% | |
| ! | GTTATTTCCAGAACCATGTC+AGG | - | chr1_4:44182725-44182744 | Msa0164660:intron | 40.0% |
| AAACTCCCAAAACATCACAG+CGG | + | chr1_4:44182862-44182881 | None:intergenic | 40.0% | |
| !! | TTTTTCGGTTGCTGCTGAAA+TGG | - | chr1_4:44182891-44182910 | Msa0164660:intron | 40.0% |
| GCTGAAATGGTTATGTCATG+AGG | - | chr1_4:44182904-44182923 | Msa0164660:intron | 40.0% | |
| ! | ACTTAAAGGCTTTGGCTGAT+AGG | - | chr1_4:44182946-44182965 | Msa0164660:intron | 40.0% |
| !! | TGTTTTTGTTCTCACGTTCG+GGG | - | chr1_4:44183187-44183206 | Msa0164660:intron | 40.0% |
| TTCAAGCTTCTCTTAAGGGA+GGG | + | chr1_4:44183475-44183494 | None:intergenic | 40.0% | |
| ATTCAAGCTTCTCTTAAGGG+AGG | + | chr1_4:44183476-44183495 | None:intergenic | 40.0% | |
| ! | GTTACCCTCTCTTGTTTAAG+GGG | + | chr1_4:44184219-44184238 | None:intergenic | 40.0% |
| ! | CGTTACCCTCTCTTGTTTAA+GGG | + | chr1_4:44184220-44184239 | None:intergenic | 40.0% |
| ! | ACGTTACCCTCTCTTGTTTA+AGG | + | chr1_4:44184221-44184240 | None:intergenic | 40.0% |
| TGAAGAGGTTGCAGTTAACA+CGG | + | chr1_4:44184252-44184271 | None:intergenic | 40.0% | |
| AAAGAAGTAGACGTAAGGCA+TGG | + | chr1_4:44184658-44184677 | None:intergenic | 40.0% | |
| GTCTACTTCTTTCTCTTTGC+TGG | - | chr1_4:44184666-44184685 | Msa0164660:intron | 40.0% | |
| ATATGTGAAAATTGGGCCAG+TGG | - | chr1_4:44184694-44184713 | Msa0164660:intron | 40.0% | |
| ! | TCCGATAAAAAAGCATGCAC+TGG | + | chr1_4:44184793-44184812 | None:intergenic | 40.0% |
| TACTTTGAACTAGATGGGAG+TGG | + | chr1_4:44184906-44184925 | None:intergenic | 40.0% | |
| ! | GCATTTTTCTTGTGCAGATG+CGG | + | chr1_4:44184958-44184977 | None:intergenic | 40.0% |
| TGGTGTGAAGTCATGATTAC+AGG | - | chr1_4:44185386-44185405 | Msa0164660:intron | 40.0% | |
| TGTGAAGTCATGATTACAGG+TGG | - | chr1_4:44185389-44185408 | Msa0164660:intron | 40.0% | |
| GCTACACATGATCTTCAAGA+AGG | - | chr1_4:44186182-44186201 | Msa0164660:intron | 40.0% | |
| ! | TTTCAGGTACCTATAGCTGT+AGG | - | chr1_4:44186701-44186720 | Msa0164660:intron | 40.0% |
| TGTTCATGTGGCATAATTGC+TGG | - | chr1_4:44186827-44186846 | Msa0164660:intron | 40.0% | |
| TTGGTGGAGGGTTTATCTTA+GGG | - | chr1_4:44186873-44186892 | Msa0164660:intron | 40.0% | |
| ATCTTAGGGCCACTATTCAT+TGG | - | chr1_4:44186887-44186906 | Msa0164660:intron | 40.0% | |
| ! | AGAATTAAGGTACCTGAGGA+GGG | + | chr1_4:44186922-44186941 | None:intergenic | 40.0% |
| ! | TAGAATTAAGGTACCTGAGG+AGG | + | chr1_4:44186923-44186942 | None:intergenic | 40.0% |
| ! | ACGTAGAATTAAGGTACCTG+AGG | + | chr1_4:44186926-44186945 | None:intergenic | 40.0% |
| GAATGGGAAAACGTTTCAGA+AGG | + | chr1_4:44187139-44187158 | None:intergenic | 40.0% | |
| CTACCCTTACCATATGGAAT+GGG | + | chr1_4:44187155-44187174 | None:intergenic | 40.0% | |
| ACCACTCACAAAAACTGTGA+GGG | + | chr1_4:44187367-44187386 | None:intergenic | 40.0% | |
| TACCACTCACAAAAACTGTG+AGG | + | chr1_4:44187368-44187387 | None:intergenic | 40.0% | |
| ! | GGTGCTCATCTTAATTTGAC+TGG | - | chr1_4:44187616-44187635 | Msa0164660:intron | 40.0% |
| CTGTTCCACCTGTAATTTGA+AGG | + | chr1_4:44187786-44187805 | None:intergenic | 40.0% | |
| CTTCAAATTACAGGTGGAAC+AGG | - | chr1_4:44187784-44187803 | Msa0164660:intron | 40.0% | |
| ! | TTGGTAACTTATGTGCGTAC+GGG | - | chr1_4:44187854-44187873 | Msa0164660:intron | 40.0% |
| GTGGTTGGAAATCAGCATTT+AGG | - | chr1_4:44187980-44187999 | Msa0164660:CDS | 40.0% | |
| GGGTAATTCTCGGAAGATCA+AGG | - | chr1_4:44178090-44178109 | Msa0164660:three_prime_UTR | 45.0% | |
| !!! | CTGGTGTTGCTTTTTGGTCA+GGG | + | chr1_4:44178181-44178200 | None:intergenic | 45.0% |
| !!! | TGGAAGCTGGTGTTGCTTTT+TGG | + | chr1_4:44178187-44178206 | None:intergenic | 45.0% |
| CAGCTTCCAATGAGACCAAA+GGG | - | chr1_4:44178198-44178217 | Msa0164660:three_prime_UTR | 45.0% | |
| AGCTTCCAATGAGACCAAAG+GGG | - | chr1_4:44178199-44178218 | Msa0164660:three_prime_UTR | 45.0% | |
| ATCAACCCCTTTGGTCTCAT+TGG | + | chr1_4:44178207-44178226 | None:intergenic | 45.0% | |
| GATCTTTGTGGTGTATCCAG+GGG | - | chr1_4:44178530-44178549 | Msa0164660:intron | 45.0% | |
| TCCAGGGGATGAAATTTGGT+TGG | - | chr1_4:44178545-44178564 | Msa0164660:intron | 45.0% | |
| TCCAACCAAATTTCATCCCC+TGG | + | chr1_4:44178549-44178568 | None:intergenic | 45.0% | |
| GGATCATCATTTGGCACTGT+AGG | - | chr1_4:44178601-44178620 | Msa0164660:intron | 45.0% | |
| TCATCATTTGGCACTGTAGG+AGG | - | chr1_4:44178604-44178623 | Msa0164660:intron | 45.0% | |
| CCCATGCTTACCCTAATTGT+TGG | - | chr1_4:44178652-44178671 | Msa0164660:intron | 45.0% | |
| GTGTGCTGTGGATGATACAT+AGG | - | chr1_4:44178883-44178902 | Msa0164660:intron | 45.0% | |
| ATATCCTTAACCAATGCCCC+GGG | + | chr1_4:44179889-44179908 | None:intergenic | 45.0% | |
| CATATCCTTAACCAATGCCC+CGG | + | chr1_4:44179890-44179909 | None:intergenic | 45.0% | |
| AGTCTGCCCACATTGAGTTT+CGG | + | chr1_4:44180089-44180108 | None:intergenic | 45.0% | |
| ACCCAAAGAGGTTGCAAGTA+AGG | - | chr1_4:44180148-44180167 | Msa0164660:intron | 45.0% | |
| GCCTTACTTGCAACCTCTTT+GGG | + | chr1_4:44180152-44180171 | None:intergenic | 45.0% | |
| TGCCTTACTTGCAACCTCTT+TGG | + | chr1_4:44180153-44180172 | None:intergenic | 45.0% | |
| AGTGAATAAGTGGGGATTCC+GGG | - | chr1_4:44180343-44180362 | Msa0164660:intron | 45.0% | |
| GCATGCATCGTTATATGCAG+GGG | + | chr1_4:44180382-44180401 | None:intergenic | 45.0% | |
| GGCATGCATCGTTATATGCA+GGG | + | chr1_4:44180383-44180402 | None:intergenic | 45.0% | |
| TTCCAGAACCATGTCAGGTA+TGG | - | chr1_4:44182730-44182749 | Msa0164660:intron | 45.0% | |
| TCAACTCACCATACCTGACA+TGG | + | chr1_4:44182741-44182760 | None:intergenic | 45.0% | |
| ! | TGTTGCCGCTGTGATGTTTT+GGG | - | chr1_4:44182854-44182873 | Msa0164660:intron | 45.0% |
| ! | TGTTTGGAATAAGGGGAGAG+AGG | + | chr1_4:44183432-44183451 | None:intergenic | 45.0% |
| TCAAGCTTCTCTTAAGGGAG+GGG | + | chr1_4:44183474-44183493 | None:intergenic | 45.0% | |
| ACTTGCCCTTCATGATAGAC+AGG | + | chr1_4:44184307-44184326 | None:intergenic | 45.0% | |
| TGCATTCCAATGAGAGTCGA+GGG | + | chr1_4:44184604-44184623 | None:intergenic | 45.0% | |
| CAGTATGCCACATTGAGTGA+CGG | + | chr1_4:44184729-44184748 | None:intergenic | 45.0% | |
| ! | AAATGACTATGTAGGGCGCT+GGG | + | chr1_4:44185112-44185131 | None:intergenic | 45.0% |
| AAAATGACTATGTAGGGCGC+TGG | + | chr1_4:44185113-44185132 | None:intergenic | 45.0% | |
| ACTCTCATACTTCCACCTCA+TGG | - | chr1_4:44185204-44185223 | Msa0164660:intron | 45.0% | |
| GTCAATCACAGGAAGGTCAA+GGG | + | chr1_4:44185459-44185478 | None:intergenic | 45.0% | |
| AGTCAATCACAGGAAGGTCA+AGG | + | chr1_4:44185460-44185479 | None:intergenic | 45.0% | |
| TACATCCCTGCTACAATTCC+AGG | - | chr1_4:44185845-44185864 | Msa0164660:intron | 45.0% | |
| AGCTTCCTGGAATTGTAGCA+GGG | + | chr1_4:44185853-44185872 | None:intergenic | 45.0% | |
| TAGCTTCCTGGAATTGTAGC+AGG | + | chr1_4:44185854-44185873 | None:intergenic | 45.0% | |
| GCTACAATTCCAGGAAGCTA+AGG | - | chr1_4:44185854-44185873 | Msa0164660:intron | 45.0% | |
| GTGAATTGTCCTTAGCTTCC+TGG | + | chr1_4:44185866-44185885 | None:intergenic | 45.0% | |
| TGTAGGAGTGAGTGGATATG+AGG | - | chr1_4:44186718-44186737 | Msa0164660:intron | 45.0% | |
| CTTGGTGGAGGGTTTATCTT+AGG | - | chr1_4:44186872-44186891 | Msa0164660:intron | 45.0% | |
| TTCTGCATCTATGTCTGTGG+TGG | - | chr1_4:44187106-44187125 | Msa0164660:intron | 45.0% | |
| CCTACCCTTACCATATGGAA+TGG | + | chr1_4:44187156-44187175 | None:intergenic | 45.0% | |
| CCATTCCATATGGTAAGGGT+AGG | - | chr1_4:44187153-44187172 | Msa0164660:intron | 45.0% | |
| CCACTATTGCTGCACTTGTT+GGG | - | chr1_4:44187277-44187296 | Msa0164660:intron | 45.0% | |
| ! | TGCACTTGTTGGGCAACATT+TGG | - | chr1_4:44187287-44187306 | Msa0164660:intron | 45.0% |
| TGGTAACTTATGTGCGTACG+GGG | - | chr1_4:44187855-44187874 | Msa0164660:intron | 45.0% | |
| !! | TATATAAATATATAGATATA+CGG | + | chr1_4:44178026-44178045 | None:intergenic | 5.0% |
| !!! | AATTGTTTTTTTTTTTTTTA+AGG | - | chr1_4:44179515-44179534 | Msa0164660:intron | 5.0% |
| !!! | ATTATTTTTTATTTTTTGTA+AGG | - | chr1_4:44180211-44180230 | Msa0164660:intron | 5.0% |
| !!! | ATTAAAAAATAATTTTGAAT+CGG | + | chr1_4:44180434-44180453 | None:intergenic | 5.0% |
| !! | TAGAAAATAATAATAATATA+CGG | + | chr1_4:44181968-44181987 | None:intergenic | 5.0% |
| !! | ATTATTAAAAAAATATATTG+AGG | + | chr1_4:44183541-44183560 | None:intergenic | 5.0% |
| !!! | ATTATTGTAATTTTATTTTT+TGG | + | chr1_4:44183724-44183743 | None:intergenic | 5.0% |
| !! | ACAAAAATAAAAATAATTTA+GGG | - | chr1_4:44184524-44184543 | Msa0164660:intron | 5.0% |
| !!! | GCTGGTGTTGCTTTTTGGTC+AGG | + | chr1_4:44178182-44178201 | None:intergenic | 50.0% |
| CCTTTGGTCTCATTGGAAGC+TGG | + | chr1_4:44178200-44178219 | None:intergenic | 50.0% | |
| CCAGCTTCCAATGAGACCAA+AGG | - | chr1_4:44178197-44178216 | Msa0164660:three_prime_UTR | 50.0% | |
| ! | TTTGGCACTGTAGGAGGTGT+TGG | - | chr1_4:44178610-44178629 | Msa0164660:intron | 50.0% |
| TATCCTTAACCAATGCCCCG+GGG | + | chr1_4:44179888-44179907 | None:intergenic | 50.0% | |
| GATATGCTTAACCTGTGCCC+CGG | - | chr1_4:44180009-44180028 | Msa0164660:intron | 50.0% | |
| ATATGCTTAACCTGTGCCCC+GGG | - | chr1_4:44180010-44180029 | Msa0164660:intron | 50.0% | |
| ! | TCGGATGAGTTGGGTGTTCA+AGG | + | chr1_4:44180070-44180089 | None:intergenic | 50.0% |
| GCAAGTAAGGCAGATGCCTT+AGG | - | chr1_4:44180161-44180180 | Msa0164660:intron | 50.0% | |
| GTGAATAAGTGGGGATTCCG+GGG | - | chr1_4:44180344-44180363 | Msa0164660:intron | 50.0% | |
| ATCGTTATATGCAGGGGTCG+GGG | + | chr1_4:44180376-44180395 | None:intergenic | 50.0% | |
| CATCGTTATATGCAGGGGTC+GGG | + | chr1_4:44180377-44180396 | None:intergenic | 50.0% | |
| GCATCGTTATATGCAGGGGT+CGG | + | chr1_4:44180378-44180397 | None:intergenic | 50.0% | |
| GGGCATGCATCGTTATATGC+AGG | + | chr1_4:44180384-44180403 | None:intergenic | 50.0% | |
| TGAGCATAGCTCAGTTGGCA+GGG | + | chr1_4:44180405-44180424 | None:intergenic | 50.0% | |
| TGCCAACTGAGCTATGCTCA+CGG | - | chr1_4:44180405-44180424 | Msa0164660:CDS | 50.0% | |
| TAGTCACTGACGGAAGGGTT+AGG | + | chr1_4:44182089-44182108 | None:intergenic | 50.0% | |
| AGGCTTAGTCACTGACGGAA+GGG | + | chr1_4:44182094-44182113 | None:intergenic | 50.0% | |
| AGTGGAGGCTTAGTCACTGA+CGG | + | chr1_4:44182099-44182118 | None:intergenic | 50.0% | |
| ! | TGTTGCAAGGAGGATAGTGG+AGG | + | chr1_4:44182114-44182133 | None:intergenic | 50.0% |
| CACCATACCTGACATGGTTC+TGG | + | chr1_4:44182735-44182754 | None:intergenic | 50.0% | |
| ! | GTGTTGCCGCTGTGATGTTT+TGG | - | chr1_4:44182853-44182872 | Msa0164660:intron | 50.0% |
| ! | AAAGGCTTTGGCTGATAGGC+AGG | - | chr1_4:44182950-44182969 | Msa0164660:intron | 50.0% |
| CAAAGTCACGATACCTGACG+CGG | - | chr1_4:44183017-44183036 | Msa0164660:intron | 50.0% | |
| !! | GTTGTTTCTAGAACCGCGTC+AGG | + | chr1_4:44183033-44183052 | None:intergenic | 50.0% |
| TCCAATGAGAGTCGAGGGTT+GGG | + | chr1_4:44184599-44184618 | None:intergenic | 50.0% | |
| TTCCAATGAGAGTCGAGGGT+TGG | + | chr1_4:44184600-44184619 | None:intergenic | 50.0% | |
| CTGCATTCCAATGAGAGTCG+AGG | + | chr1_4:44184605-44184624 | None:intergenic | 50.0% | |
| CTCGACTCTCATTGGAATGC+AGG | - | chr1_4:44184603-44184622 | Msa0164660:intron | 50.0% | |
| ACATTGAGTGACGGCCATCT+AGG | + | chr1_4:44184720-44184739 | None:intergenic | 50.0% | |
| TAGATGGCCGTCACTCAATG+TGG | - | chr1_4:44184719-44184738 | Msa0164660:intron | 50.0% | |
| CTTAGGCGCAATGGCTTCTA+GGG | + | chr1_4:44184983-44185002 | None:intergenic | 50.0% | |
| ACTTAGGCGCAATGGCTTCT+AGG | + | chr1_4:44184984-44185003 | None:intergenic | 50.0% | |
| TAGAAGCCATTGCGCCTAAG+TGG | - | chr1_4:44184983-44185002 | Msa0164660:intron | 50.0% | |
| AGAAGCCATTGCGCCTAAGT+GGG | - | chr1_4:44184984-44185003 | Msa0164660:intron | 50.0% | |
| TCATTGTCCTTCTTGCGTCG+CGG | + | chr1_4:44185019-44185038 | None:intergenic | 50.0% | |
| !! | AAGGCAATGGGCTAGACACA+TGG | + | chr1_4:44185043-44185062 | None:intergenic | 50.0% |
| ATGTGTCTAGCCCATTGCCT+TGG | - | chr1_4:44185042-44185061 | Msa0164660:intron | 50.0% | |
| ! | GGTGGAAGTATGAGAGTCCT+CGG | + | chr1_4:44185201-44185220 | None:intergenic | 50.0% |
| GTCATGATTACAGGTGGAGC+AGG | - | chr1_4:44185395-44185414 | Msa0164660:intron | 50.0% | |
| TCACAGGAAGGTCAAGGGTT+GGG | + | chr1_4:44185454-44185473 | None:intergenic | 50.0% | |
| ATCACAGGAAGGTCAAGGGT+TGG | + | chr1_4:44185455-44185474 | None:intergenic | 50.0% | |
| CCACTCACTCCTACAGCTAT+AGG | + | chr1_4:44186713-44186732 | None:intergenic | 50.0% | |
| CCTATAGCTGTAGGAGTGAG+TGG | - | chr1_4:44186710-44186729 | Msa0164660:intron | 50.0% | |
| !! | GGAATAATCGGTGGCTTGCT+TGG | - | chr1_4:44186848-44186867 | Msa0164660:intron | 50.0% |
| GGGCCACTATTCATTGGACT+TGG | - | chr1_4:44186893-44186912 | Msa0164660:intron | 50.0% | |
| GCCACTATTGCTGCACTTGT+TGG | - | chr1_4:44187276-44187295 | Msa0164660:intron | 50.0% | |
| CCCAACAAGTGCAGCAATAG+TGG | + | chr1_4:44187280-44187299 | None:intergenic | 50.0% | |
| ! | GCCCTCACAGTTTTTGTGAG+TGG | - | chr1_4:44187363-44187382 | Msa0164660:intron | 50.0% |
| ACTTATGTGCGTACGGGGTT+AGG | - | chr1_4:44187860-44187879 | Msa0164660:intron | 50.0% | |
| CTTGCACGCATACACACTCG+AGG | + | chr1_4:44179562-44179581 | None:intergenic | 55.0% | |
| GAAATGCTAACTGGTGCCCC+CGG | - | chr1_4:44179868-44179887 | Msa0164660:intron | 55.0% | |
| AAATGCTAACTGGTGCCCCC+GGG | - | chr1_4:44179869-44179888 | Msa0164660:intron | 55.0% | |
| ATCCTTAACCAATGCCCCGG+GGG | + | chr1_4:44179887-44179906 | None:intergenic | 55.0% | |
| ATGACAGGGTCGACCCAAAG+AGG | - | chr1_4:44180136-44180155 | Msa0164660:intron | 55.0% | |
| GAGCATAGCTCAGTTGGCAG+GGG | + | chr1_4:44180404-44180423 | None:intergenic | 55.0% | |
| GTGAGCATAGCTCAGTTGGC+AGG | + | chr1_4:44180406-44180425 | None:intergenic | 55.0% | |
| GCCAACTGAGCTATGCTCAC+GGG | - | chr1_4:44180406-44180425 | Msa0164660:CDS | 55.0% | |
| ACCCGTGAGCATAGCTCAGT+TGG | + | chr1_4:44180410-44180429 | None:intergenic | 55.0% | |
| GAGGCTTAGTCACTGACGGA+AGG | + | chr1_4:44182095-44182114 | None:intergenic | 55.0% | |
| TGTTCTCACGTTCGGGGTTG+TGG | - | chr1_4:44183193-44183212 | Msa0164660:intron | 55.0% | |
| TCACGTTCGGGGTTGTGGAA+TGG | - | chr1_4:44183198-44183217 | Msa0164660:intron | 55.0% | |
| TCCCAACCCTCGACTCTCAT+TGG | - | chr1_4:44184595-44184614 | Msa0164660:intron | 55.0% | |
| AATTGGGCCAGTGGCCTAGA+TGG | - | chr1_4:44184703-44184722 | Msa0164660:intron | 55.0% | |
| CCTTCTTGCGTCGCGGTATT+GGG | + | chr1_4:44185012-44185031 | None:intergenic | 55.0% | |
| TCCTTCTTGCGTCGCGGTAT+TGG | + | chr1_4:44185013-44185032 | None:intergenic | 55.0% | |
| ! | TAGCCCATTGCCTTGGCTCT+TGG | - | chr1_4:44185049-44185068 | Msa0164660:intron | 55.0% |
| CTGCCAAGAGCCAAGGCAAT+GGG | + | chr1_4:44185055-44185074 | None:intergenic | 55.0% | |
| ATTCTGCCTGCCAAGAGCCA+AGG | + | chr1_4:44185062-44185081 | None:intergenic | 55.0% | |
| GGCAGAATCCCCGTGTTTGA+CGG | - | chr1_4:44185074-44185093 | Msa0164660:intron | 55.0% | |
| !! | ATCGGTGGCTTGCTTGGTCT+TGG | - | chr1_4:44186854-44186873 | Msa0164660:intron | 55.0% |
| !! | GCTTGCTTGGTCTTGGTGGA+GGG | - | chr1_4:44186861-44186880 | Msa0164660:intron | 55.0% |
| TGGACTTGGAATCCCTCCTC+AGG | - | chr1_4:44186907-44186926 | Msa0164660:intron | 55.0% | |
| !! | GGCACTGTAGGAGGTGTTGG+CGG | - | chr1_4:44178613-44178632 | Msa0164660:intron | 60.0% |
| !! | GCACTGTAGGAGGTGTTGGC+GGG | - | chr1_4:44178614-44178633 | Msa0164660:intron | 60.0% |
| !! | CACTGTAGGAGGTGTTGGCG+GGG | - | chr1_4:44178615-44178634 | Msa0164660:intron | 60.0% |
| !! | ACTGTAGGAGGTGTTGGCGG+GGG | - | chr1_4:44178616-44178635 | Msa0164660:intron | 60.0% |
| AATGCTAACTGGTGCCCCCG+GGG | - | chr1_4:44179870-44179889 | Msa0164660:intron | 60.0% | |
| ! | GCGGTATTGGGCACCCACTT+AGG | + | chr1_4:44185000-44185019 | None:intergenic | 60.0% |
| CCCAATACCGCGACGCAAGA+AGG | - | chr1_4:44185009-44185028 | Msa0164660:intron | 60.0% | |
| CCTGCCAAGAGCCAAGGCAA+TGG | + | chr1_4:44185056-44185075 | None:intergenic | 60.0% | |
| ! | CCATTGCCTTGGCTCTTGGC+AGG | - | chr1_4:44185053-44185072 | Msa0164660:intron | 60.0% |
| TGGACAGGCCGTCAAACACG+GGG | + | chr1_4:44185085-44185104 | None:intergenic | 60.0% | |
| CTGGACAGGCCGTCAAACAC+GGG | + | chr1_4:44185086-44185105 | None:intergenic | 60.0% | |
| CCTGGACAGGCCGTCAAACA+CGG | + | chr1_4:44185087-44185106 | None:intergenic | 60.0% | |
| !! | GGTGGCTTGCTTGGTCTTGG+TGG | - | chr1_4:44186857-44186876 | Msa0164660:intron | 60.0% |
| !! | GGCTTGCTTGGTCTTGGTGG+AGG | - | chr1_4:44186860-44186879 | Msa0164660:intron | 60.0% |
| !! | TGCCCCCGGGGCATTGGTTA+AGG | - | chr1_4:44179882-44179901 | Msa0164660:intron | 65.0% |
| TCCTGCTAACCGGTGCTCCC+GGG | + | chr1_4:44180030-44180049 | None:intergenic | 65.0% | |
| GTCCTGCTAACCGGTGCTCC+CGG | + | chr1_4:44180031-44180050 | None:intergenic | 65.0% | |
| GTGACGGCCATCTAGGCCAC+TGG | + | chr1_4:44184713-44184732 | None:intergenic | 65.0% | |
| GGGCACCCACTTAGGCGCAA+TGG | + | chr1_4:44184992-44185011 | None:intergenic | 65.0% | |
| CCGTGTTTGACGGCCTGTCC+AGG | - | chr1_4:44185084-44185103 | Msa0164660:intron | 65.0% | |
| !! | TATGTAGGGCGCTGGGTGCC+TGG | + | chr1_4:44185105-44185124 | None:intergenic | 65.0% |
| !! | GTAGGAGGTGTTGGCGGGGG+TGG | - | chr1_4:44178619-44178638 | Msa0164660:intron | 70.0% |
| AACTGGTGCCCCCGGGGCAT+TGG | - | chr1_4:44179876-44179895 | Msa0164660:intron | 70.0% | |
| ! | AACCTGTGCCCCGGGAGCAC+CGG | - | chr1_4:44180018-44180037 | Msa0164660:intron | 70.0% |
| CCTGCTAACCGGTGCTCCCG+GGG | + | chr1_4:44180029-44180048 | None:intergenic | 70.0% | |
| AGGGGTCGGGGTTCGAACCC+CGG | + | chr1_4:44180364-44180383 | None:intergenic | 70.0% | |
| AACCGGTGCTCCCGGGGCAC+AGG | + | chr1_4:44180023-44180042 | None:intergenic | 75.0% | |
| !! | CCCCGGGAGCACCGGTTAGC+AGG | - | chr1_4:44180026-44180045 | Msa0164660:intron | 75.0% |
| !! | AGGGCGCTGGGTGCCTGGAC+AGG | + | chr1_4:44185100-44185119 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 44178008 | 44188146 | 44178008 | ID=Msa0164660;Name=Msa0164660 |
| chr1_4 | mRNA | 44178008 | 44188146 | 44178008 | ID=Msa0164660-mRNA-1;Parent=Msa0164660;Name=Msa0164660-mRNA-1;_AED=0.31;_eAED=0.31;_QI=39|1|1|1|0.90|0.91|12|258|481 |
| chr1_4 | exon | 44178008 | 44178357 | 44178008 | ID=Msa0164660-mRNA-1:exon:12716;Parent=Msa0164660-mRNA-1 |
| chr1_4 | exon | 44178758 | 44178898 | 44178758 | ID=Msa0164660-mRNA-1:exon:12715;Parent=Msa0164660-mRNA-1 |
| chr1_4 | exon | 44178990 | 44179083 | 44178990 | ID=Msa0164660-mRNA-1:exon:12714;Parent=Msa0164660-mRNA-1 |
| chr1_4 | exon | 44179226 | 44179447 | 44179226 | ID=Msa0164660-mRNA-1:exon:12713;Parent=Msa0164660-mRNA-1 |
| chr1_4 | exon | 44179548 | 44179598 | 44179548 | ID=Msa0164660-mRNA-1:exon:12712;Parent=Msa0164660-mRNA-1 |
| chr1_4 | exon | 44179723 | 44179809 | 44179723 | ID=Msa0164660-mRNA-1:exon:12711;Parent=Msa0164660-mRNA-1 |
| chr1_4 | exon | 44179901 | 44179989 | 44179901 | ID=Msa0164660-mRNA-1:exon:12710;Parent=Msa0164660-mRNA-1 |
| chr1_4 | exon | 44180260 | 44180287 | 44180260 | ID=Msa0164660-mRNA-1:exon:12709;Parent=Msa0164660-mRNA-1 |
| chr1_4 | exon | 44180394 | 44180458 | 44180394 | ID=Msa0164660-mRNA-1:exon:12708;Parent=Msa0164660-mRNA-1 |
| chr1_4 | exon | 44180558 | 44180758 | 44180558 | ID=Msa0164660-mRNA-1:exon:12707;Parent=Msa0164660-mRNA-1 |
| chr1_4 | exon | 44187445 | 44187604 | 44187445 | ID=Msa0164660-mRNA-1:exon:12706;Parent=Msa0164660-mRNA-1 |
| chr1_4 | exon | 44187892 | 44188146 | 44187892 | ID=Msa0164660-mRNA-1:exon:12705;Parent=Msa0164660-mRNA-1 |
| chr1_4 | five_prime_UTR | 44188108 | 44188146 | 44188108 | ID=Msa0164660-mRNA-1:five_prime_utr;Parent=Msa0164660-mRNA-1 |
| chr1_4 | CDS | 44187892 | 44188107 | 44187892 | ID=Msa0164660-mRNA-1:cds;Parent=Msa0164660-mRNA-1 |
| chr1_4 | CDS | 44187445 | 44187604 | 44187445 | ID=Msa0164660-mRNA-1:cds;Parent=Msa0164660-mRNA-1 |
| chr1_4 | CDS | 44180558 | 44180758 | 44180558 | ID=Msa0164660-mRNA-1:cds;Parent=Msa0164660-mRNA-1 |
| chr1_4 | CDS | 44180394 | 44180458 | 44180394 | ID=Msa0164660-mRNA-1:cds;Parent=Msa0164660-mRNA-1 |
| chr1_4 | CDS | 44180260 | 44180287 | 44180260 | ID=Msa0164660-mRNA-1:cds;Parent=Msa0164660-mRNA-1 |
| chr1_4 | CDS | 44179901 | 44179989 | 44179901 | ID=Msa0164660-mRNA-1:cds;Parent=Msa0164660-mRNA-1 |
| chr1_4 | CDS | 44179723 | 44179809 | 44179723 | ID=Msa0164660-mRNA-1:cds;Parent=Msa0164660-mRNA-1 |
| chr1_4 | CDS | 44179548 | 44179598 | 44179548 | ID=Msa0164660-mRNA-1:cds;Parent=Msa0164660-mRNA-1 |
| chr1_4 | CDS | 44179226 | 44179447 | 44179226 | ID=Msa0164660-mRNA-1:cds;Parent=Msa0164660-mRNA-1 |
| chr1_4 | CDS | 44178990 | 44179083 | 44178990 | ID=Msa0164660-mRNA-1:cds;Parent=Msa0164660-mRNA-1 |
| chr1_4 | CDS | 44178758 | 44178898 | 44178758 | ID=Msa0164660-mRNA-1:cds;Parent=Msa0164660-mRNA-1 |
| chr1_4 | CDS | 44178266 | 44178357 | 44178266 | ID=Msa0164660-mRNA-1:cds;Parent=Msa0164660-mRNA-1 |
| chr1_4 | three_prime_UTR | 44178008 | 44178265 | 44178008 | ID=Msa0164660-mRNA-1:three_prime_utr;Parent=Msa0164660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
