Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06557.t1 | XP_013461471.1 | 94.6 | 467 | 20 | 1 | 1 | 462 | 1 | 467 | 1.20E-249 | 872.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06557.t1 | B2JQW2 | 25.0 | 328 | 158 | 10 | 127 | 446 | 39 | 286 | 1.3e-10 | 69.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06557.t1 | A0A072V1D8 | 94.6 | 467 | 20 | 1 | 1 | 462 | 1 | 467 | 8.4e-250 | 872.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene06557 | 0.866003 | 3.92E-65 | -1.69E-46 |
| MS.gene049171 | MS.gene06557 | 0.805251 | 1.46E-49 | -1.69E-46 |
| MS.gene049173 | MS.gene06557 | 0.806381 | 8.46E-50 | -1.69E-46 |
| MS.gene049217 | MS.gene06557 | 0.849147 | 3.90E-60 | -1.69E-46 |
| MS.gene049222 | MS.gene06557 | 0.851625 | 7.86E-61 | -1.69E-46 |
| MS.gene049285 | MS.gene06557 | 0.843075 | 1.75E-58 | -1.69E-46 |
| MS.gene049320 | MS.gene06557 | 0.825088 | 5.67E-54 | -1.69E-46 |
| MS.gene049351 | MS.gene06557 | 0.819292 | 1.25E-52 | -1.69E-46 |
| MS.gene049369 | MS.gene06557 | 0.808541 | 2.94E-50 | -1.69E-46 |
| MS.gene049427 | MS.gene06557 | 0.989108 | 9.99E-177 | -1.69E-46 |
| MS.gene049491 | MS.gene06557 | 0.814779 | 1.29E-51 | -1.69E-46 |
| MS.gene049609 | MS.gene06557 | 0.846982 | 1.54E-59 | -1.69E-46 |
| MS.gene049614 | MS.gene06557 | 0.840527 | 8.24E-58 | -1.69E-46 |
| MS.gene049627 | MS.gene06557 | 0.811309 | 7.47E-51 | -1.69E-46 |
| MS.gene049633 | MS.gene06557 | 0.817132 | 3.86E-52 | -1.69E-46 |
| MS.gene049661 | MS.gene06557 | 0.822433 | 2.38E-53 | -1.69E-46 |
| MS.gene049662 | MS.gene06557 | 0.810766 | 9.79E-51 | -1.69E-46 |
| MS.gene049760 | MS.gene06557 | 0.801272 | 9.74E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene06557 | 0.868888 | 4.67E-66 | -1.69E-46 |
| MS.gene050076 | MS.gene06557 | 0.813503 | 2.48E-51 | -1.69E-46 |
| MS.gene050163 | MS.gene06557 | 0.863657 | 2.13E-64 | -1.69E-46 |
| MS.gene050165 | MS.gene06557 | 0.844953 | 5.49E-59 | -1.69E-46 |
| MS.gene050301 | MS.gene06557 | 0.824197 | 9.19E-54 | -1.69E-46 |
| MS.gene050333 | MS.gene06557 | 0.832534 | 8.95E-56 | -1.69E-46 |
| MS.gene050432 | MS.gene06557 | 0.851887 | 6.62E-61 | -1.69E-46 |
| MS.gene050504 | MS.gene06557 | 0.807631 | 4.60E-50 | -1.69E-46 |
| MS.gene050518 | MS.gene06557 | 0.816234 | 6.14E-52 | -1.69E-46 |
| MS.gene050538 | MS.gene06557 | 0.830133 | 3.49E-55 | -1.69E-46 |
| MS.gene050577 | MS.gene06557 | 0.805395 | 1.36E-49 | -1.69E-46 |
| MS.gene050593 | MS.gene06557 | 0.843963 | 1.01E-58 | -1.69E-46 |
| MS.gene050670 | MS.gene06557 | 0.811514 | 6.74E-51 | -1.69E-46 |
| MS.gene050747 | MS.gene06557 | 0.87331 | 1.62E-67 | -1.69E-46 |
| MS.gene050767 | MS.gene06557 | 0.853545 | 2.23E-61 | -1.69E-46 |
| MS.gene050770 | MS.gene06557 | 0.859138 | 5.09E-63 | -1.69E-46 |
| MS.gene050772 | MS.gene06557 | 0.853148 | 2.89E-61 | -1.69E-46 |
| MS.gene050781 | MS.gene06557 | 0.819003 | 1.46E-52 | -1.69E-46 |
| MS.gene050783 | MS.gene06557 | 0.843531 | 1.32E-58 | -1.69E-46 |
| MS.gene05080 | MS.gene06557 | 0.80104 | 1.09E-48 | -1.69E-46 |
| MS.gene050812 | MS.gene06557 | 0.869118 | 3.93E-66 | -1.69E-46 |
| MS.gene050950 | MS.gene06557 | 0.878921 | 1.90E-69 | -1.69E-46 |
| MS.gene05100 | MS.gene06557 | 0.842169 | 3.05E-58 | -1.69E-46 |
| MS.gene05101 | MS.gene06557 | 0.851092 | 1.11E-60 | -1.69E-46 |
| MS.gene05105 | MS.gene06557 | 0.830282 | 3.21E-55 | -1.69E-46 |
| MS.gene051228 | MS.gene06557 | 0.812086 | 5.06E-51 | -1.69E-46 |
| MS.gene051387 | MS.gene06557 | 0.852971 | 3.25E-61 | -1.69E-46 |
| MS.gene051471 | MS.gene06557 | 0.811196 | 7.90E-51 | -1.69E-46 |
| MS.gene051582 | MS.gene06557 | 0.812206 | 4.76E-51 | -1.69E-46 |
| MS.gene051666 | MS.gene06557 | 0.88633 | 3.76E-72 | -1.69E-46 |
| MS.gene051692 | MS.gene06557 | 0.827483 | 1.53E-54 | -1.69E-46 |
| MS.gene051694 | MS.gene06557 | 0.842985 | 1.85E-58 | -1.69E-46 |
| MS.gene051810 | MS.gene06557 | 0.821566 | 3.77E-53 | -1.69E-46 |
| MS.gene051858 | MS.gene06557 | 0.824909 | 6.25E-54 | -1.69E-46 |
| MS.gene052078 | MS.gene06557 | 0.80886 | 2.52E-50 | -1.69E-46 |
| MS.gene052164 | MS.gene06557 | 0.808595 | 2.87E-50 | -1.69E-46 |
| MS.gene052188 | MS.gene06557 | 0.817734 | 2.83E-52 | -1.69E-46 |
| MS.gene052271 | MS.gene06557 | 0.842954 | 1.89E-58 | -1.69E-46 |
| MS.gene052290 | MS.gene06557 | 0.807631 | 4.60E-50 | -1.69E-46 |
| MS.gene052310 | MS.gene06557 | 0.867477 | 1.33E-65 | -1.69E-46 |
| MS.gene052322 | MS.gene06557 | 0.851294 | 9.74E-61 | -1.69E-46 |
| MS.gene052326 | MS.gene06557 | 0.835931 | 1.26E-56 | -1.69E-46 |
| MS.gene052379 | MS.gene06557 | 0.865792 | 4.57E-65 | -1.69E-46 |
| MS.gene052421 | MS.gene06557 | 0.849685 | 2.76E-60 | -1.69E-46 |
| MS.gene052481 | MS.gene06557 | 0.853989 | 1.66E-61 | -1.69E-46 |
| MS.gene052484 | MS.gene06557 | 0.852004 | 6.14E-61 | -1.69E-46 |
| MS.gene052485 | MS.gene06557 | 0.841952 | 3.48E-58 | -1.69E-46 |
| MS.gene052501 | MS.gene06557 | 0.81213 | 4.95E-51 | -1.69E-46 |
| MS.gene052505 | MS.gene06557 | 0.813204 | 2.88E-51 | -1.69E-46 |
| MS.gene052615 | MS.gene06557 | 0.849745 | 2.66E-60 | -1.69E-46 |
| MS.gene052870 | MS.gene06557 | 0.825124 | 5.56E-54 | -1.69E-46 |
| MS.gene052872 | MS.gene06557 | 0.826242 | 3.02E-54 | -1.69E-46 |
| MS.gene052916 | MS.gene06557 | 0.807609 | 4.65E-50 | -1.69E-46 |
| MS.gene052982 | MS.gene06557 | 0.810296 | 1.24E-50 | -1.69E-46 |
| MS.gene053009 | MS.gene06557 | 0.822855 | 1.89E-53 | -1.69E-46 |
| MS.gene053103 | MS.gene06557 | 0.834296 | 3.25E-56 | -1.69E-46 |
| MS.gene053104 | MS.gene06557 | 0.839596 | 1.44E-57 | -1.69E-46 |
| MS.gene053107 | MS.gene06557 | 0.880095 | 7.28E-70 | -1.69E-46 |
| MS.gene053207 | MS.gene06557 | 0.848375 | 6.38E-60 | -1.69E-46 |
| MS.gene053213 | MS.gene06557 | 0.873081 | 1.94E-67 | -1.69E-46 |
| MS.gene053286 | MS.gene06557 | 0.864482 | 1.18E-64 | -1.69E-46 |
| MS.gene053322 | MS.gene06557 | 0.885585 | 7.16E-72 | -1.69E-46 |
| MS.gene053436 | MS.gene06557 | 0.808076 | 3.70E-50 | -1.69E-46 |
| MS.gene053574 | MS.gene06557 | 0.844088 | 9.38E-59 | -1.69E-46 |
| MS.gene053579 | MS.gene06557 | 0.835191 | 1.94E-56 | -1.69E-46 |
| MS.gene053632 | MS.gene06557 | 0.828878 | 7.04E-55 | -1.69E-46 |
| MS.gene053813 | MS.gene06557 | 0.806318 | 8.72E-50 | -1.69E-46 |
| MS.gene054123 | MS.gene06557 | 0.83898 | 2.08E-57 | -1.69E-46 |
| MS.gene054376 | MS.gene06557 | 0.850952 | 1.22E-60 | -1.69E-46 |
| MS.gene054408 | MS.gene06557 | 0.859325 | 4.47E-63 | -1.69E-46 |
| MS.gene05455 | MS.gene06557 | 0.802018 | 6.84E-49 | -1.69E-46 |
| MS.gene054600 | MS.gene06557 | 0.836442 | 9.34E-57 | -1.69E-46 |
| MS.gene054642 | MS.gene06557 | 0.866256 | 3.26E-65 | -1.69E-46 |
| MS.gene054802 | MS.gene06557 | 0.865269 | 6.67E-65 | -1.69E-46 |
| MS.gene054803 | MS.gene06557 | 0.863331 | 2.69E-64 | -1.69E-46 |
| MS.gene054804 | MS.gene06557 | 0.867021 | 1.86E-65 | -1.69E-46 |
| MS.gene054927 | MS.gene06557 | 0.809711 | 1.65E-50 | -1.69E-46 |
| MS.gene05505 | MS.gene06557 | 0.845712 | 3.42E-59 | -1.69E-46 |
| MS.gene055116 | MS.gene06557 | 0.810862 | 9.33E-51 | -1.69E-46 |
| MS.gene055206 | MS.gene06557 | 0.839693 | 1.36E-57 | -1.69E-46 |
| MS.gene055212 | MS.gene06557 | 0.802416 | 5.67E-49 | -1.69E-46 |
| MS.gene055224 | MS.gene06557 | 0.800622 | 1.32E-48 | -1.69E-46 |
| MS.gene055277 | MS.gene06557 | 0.814418 | 1.56E-51 | -1.69E-46 |
| MS.gene055289 | MS.gene06557 | 0.830671 | 2.58E-55 | -1.69E-46 |
| MS.gene055362 | MS.gene06557 | 0.814876 | 1.23E-51 | -1.69E-46 |
| MS.gene055390 | MS.gene06557 | 0.805994 | 1.02E-49 | -1.69E-46 |
| MS.gene055397 | MS.gene06557 | 0.88041 | 5.62E-70 | -1.69E-46 |
| MS.gene055412 | MS.gene06557 | 0.879431 | 1.25E-69 | -1.69E-46 |
| MS.gene055499 | MS.gene06557 | 0.873882 | 1.04E-67 | -1.69E-46 |
| MS.gene055502 | MS.gene06557 | 0.824782 | 6.70E-54 | -1.69E-46 |
| MS.gene055577 | MS.gene06557 | 0.811204 | 7.87E-51 | -1.69E-46 |
| MS.gene055647 | MS.gene06557 | 0.859014 | 5.54E-63 | -1.69E-46 |
| MS.gene055722 | MS.gene06557 | 0.845773 | 3.29E-59 | -1.69E-46 |
| MS.gene055896 | MS.gene06557 | 0.826394 | 2.78E-54 | -1.69E-46 |
| MS.gene05592 | MS.gene06557 | 0.823453 | 1.37E-53 | -1.69E-46 |
| MS.gene055941 | MS.gene06557 | 0.832004 | 1.21E-55 | -1.69E-46 |
| MS.gene056083 | MS.gene06557 | 0.842419 | 2.62E-58 | -1.69E-46 |
| MS.gene056374 | MS.gene06557 | 0.854655 | 1.06E-61 | -1.69E-46 |
| MS.gene056407 | MS.gene06557 | 0.807531 | 4.83E-50 | -1.69E-46 |
| MS.gene056410 | MS.gene06557 | 0.820466 | 6.76E-53 | -1.69E-46 |
| MS.gene056452 | MS.gene06557 | 0.817536 | 3.13E-52 | -1.69E-46 |
| MS.gene056511 | MS.gene06557 | 0.817976 | 2.49E-52 | -1.69E-46 |
| MS.gene056549 | MS.gene06557 | 0.852052 | 5.95E-61 | -1.69E-46 |
| MS.gene056609 | MS.gene06557 | 0.835899 | 1.28E-56 | -1.69E-46 |
| MS.gene056657 | MS.gene06557 | 0.841703 | 4.04E-58 | -1.69E-46 |
| MS.gene05666 | MS.gene06557 | 0.800833 | 1.20E-48 | -1.69E-46 |
| MS.gene056692 | MS.gene06557 | 0.814724 | 1.33E-51 | -1.69E-46 |
| MS.gene056796 | MS.gene06557 | 0.8194 | 1.19E-52 | -1.69E-46 |
| MS.gene056897 | MS.gene06557 | 0.875408 | 3.15E-68 | -1.69E-46 |
| MS.gene057011 | MS.gene06557 | 0.917239 | 6.76E-86 | -1.69E-46 |
| MS.gene057076 | MS.gene06557 | 0.803744 | 3.01E-49 | -1.69E-46 |
| MS.gene057123 | MS.gene06557 | 0.816551 | 5.22E-52 | -1.69E-46 |
| MS.gene057124 | MS.gene06557 | 0.824957 | 6.09E-54 | -1.69E-46 |
| MS.gene057129 | MS.gene06557 | 0.888723 | 4.58E-73 | -1.69E-46 |
| MS.gene057146 | MS.gene06557 | 0.869907 | 2.18E-66 | -1.69E-46 |
| MS.gene057295 | MS.gene06557 | 0.82208 | 2.87E-53 | -1.69E-46 |
| MS.gene057331 | MS.gene06557 | 0.84083 | 6.86E-58 | -1.69E-46 |
| MS.gene05735 | MS.gene06557 | 0.807335 | 5.32E-50 | -1.69E-46 |
| MS.gene057416 | MS.gene06557 | 0.873885 | 1.04E-67 | -1.69E-46 |
| MS.gene057658 | MS.gene06557 | 0.815485 | 9.02E-52 | -1.69E-46 |
| MS.gene057775 | MS.gene06557 | 0.807238 | 5.57E-50 | -1.69E-46 |
| MS.gene057831 | MS.gene06557 | 0.823849 | 1.11E-53 | -1.69E-46 |
| MS.gene058007 | MS.gene06557 | 0.80204 | 6.78E-49 | -1.69E-46 |
| MS.gene058019 | MS.gene06557 | 0.863637 | 2.16E-64 | -1.69E-46 |
| MS.gene058130 | MS.gene06557 | 0.822178 | 2.72E-53 | -1.69E-46 |
| MS.gene058233 | MS.gene06557 | 0.827734 | 1.33E-54 | -1.69E-46 |
| MS.gene058293 | MS.gene06557 | 0.837408 | 5.29E-57 | -1.69E-46 |
| MS.gene058323 | MS.gene06557 | 0.845313 | 4.39E-59 | -1.69E-46 |
| MS.gene058365 | MS.gene06557 | 0.812682 | 3.75E-51 | -1.69E-46 |
| MS.gene05837 | MS.gene06557 | 0.800909 | 1.16E-48 | -1.69E-46 |
| MS.gene058419 | MS.gene06557 | 0.845353 | 4.28E-59 | -1.69E-46 |
| MS.gene058544 | MS.gene06557 | 0.854993 | 8.50E-62 | -1.69E-46 |
| MS.gene058660 | MS.gene06557 | 0.877476 | 6.09E-69 | -1.69E-46 |
| MS.gene058773 | MS.gene06557 | 0.817614 | 3.01E-52 | -1.69E-46 |
| MS.gene058838 | MS.gene06557 | 0.814833 | 1.26E-51 | -1.69E-46 |
| MS.gene05883 | MS.gene06557 | 0.870266 | 1.66E-66 | -1.69E-46 |
| MS.gene058928 | MS.gene06557 | 0.803489 | 3.40E-49 | -1.69E-46 |
| MS.gene058993 | MS.gene06557 | 0.806689 | 7.28E-50 | -1.69E-46 |
| MS.gene059023 | MS.gene06557 | 0.826261 | 2.99E-54 | -1.69E-46 |
| MS.gene059029 | MS.gene06557 | 0.829023 | 6.49E-55 | -1.69E-46 |
| MS.gene05907 | MS.gene06557 | 0.805891 | 1.07E-49 | -1.69E-46 |
| MS.gene059141 | MS.gene06557 | 0.81987 | 9.25E-53 | -1.69E-46 |
| MS.gene05934 | MS.gene06557 | 0.864228 | 1.41E-64 | -1.69E-46 |
| MS.gene059455 | MS.gene06557 | 0.800853 | 1.19E-48 | -1.69E-46 |
| MS.gene059536 | MS.gene06557 | 0.89834 | 5.84E-77 | -1.69E-46 |
| MS.gene059597 | MS.gene06557 | 0.821593 | 3.72E-53 | -1.69E-46 |
| MS.gene05959 | MS.gene06557 | 0.813683 | 2.26E-51 | -1.69E-46 |
| MS.gene059676 | MS.gene06557 | 0.845461 | 4.00E-59 | -1.69E-46 |
| MS.gene059677 | MS.gene06557 | 0.826839 | 2.18E-54 | -1.69E-46 |
| MS.gene059688 | MS.gene06557 | 0.847886 | 8.71E-60 | -1.69E-46 |
| MS.gene059692 | MS.gene06557 | 0.833207 | 6.09E-56 | -1.69E-46 |
| MS.gene059695 | MS.gene06557 | 0.835896 | 1.28E-56 | -1.69E-46 |
| MS.gene059708 | MS.gene06557 | 0.80352 | 3.35E-49 | -1.69E-46 |
| MS.gene059718 | MS.gene06557 | 0.843325 | 1.50E-58 | -1.69E-46 |
| MS.gene059756 | MS.gene06557 | 0.819895 | 9.13E-53 | -1.69E-46 |
| MS.gene059801 | MS.gene06557 | 0.816035 | 6.81E-52 | -1.69E-46 |
| MS.gene059902 | MS.gene06557 | 0.823352 | 1.45E-53 | -1.69E-46 |
| MS.gene059960 | MS.gene06557 | 0.905115 | 6.03E-80 | -1.69E-46 |
| MS.gene060193 | MS.gene06557 | 0.828666 | 7.92E-55 | -1.69E-46 |
| MS.gene060403 | MS.gene06557 | 0.821684 | 3.54E-53 | -1.69E-46 |
| MS.gene060407 | MS.gene06557 | 0.800001 | 1.77E-48 | -1.69E-46 |
| MS.gene060762 | MS.gene06557 | 0.835427 | 1.69E-56 | -1.69E-46 |
| MS.gene06077 | MS.gene06557 | 0.804426 | 2.17E-49 | -1.69E-46 |
| MS.gene060804 | MS.gene06557 | 0.878285 | 3.18E-69 | -1.69E-46 |
| MS.gene060818 | MS.gene06557 | 0.861819 | 7.85E-64 | -1.69E-46 |
| MS.gene060835 | MS.gene06557 | 0.811489 | 6.82E-51 | -1.69E-46 |
| MS.gene060837 | MS.gene06557 | 0.819585 | 1.07E-52 | -1.69E-46 |
| MS.gene06092 | MS.gene06557 | 0.866912 | 2.01E-65 | -1.69E-46 |
| MS.gene061041 | MS.gene06557 | 0.835468 | 1.65E-56 | -1.69E-46 |
| MS.gene061051 | MS.gene06557 | -0.820308 | 7.35E-53 | -1.69E-46 |
| MS.gene061134 | MS.gene06557 | 0.813729 | 2.21E-51 | -1.69E-46 |
| MS.gene061150 | MS.gene06557 | 0.880017 | 7.76E-70 | -1.69E-46 |
| MS.gene061171 | MS.gene06557 | 0.828407 | 9.15E-55 | -1.69E-46 |
| MS.gene061200 | MS.gene06557 | 0.898335 | 5.87E-77 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06557.t1 | MTR_3g093570 | 94.647 | 467 | 20 | 1 | 1 | 462 | 1 | 467 | 0.0 | 862 |
| MS.gene06557.t1 | MTR_3g093570 | 93.258 | 356 | 19 | 1 | 1 | 351 | 1 | 356 | 0.0 | 633 |
| MS.gene06557.t1 | MTR_2g102800 | 29.341 | 334 | 176 | 10 | 127 | 456 | 376 | 653 | 3.29e-25 | 109 |
| MS.gene06557.t1 | MTR_4g011440 | 27.003 | 337 | 186 | 11 | 125 | 456 | 370 | 651 | 1.14e-24 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06557.t1 | AT3G10840 | 56.532 | 421 | 157 | 8 | 49 | 458 | 52 | 457 | 3.03e-155 | 449 |
| MS.gene06557.t1 | AT3G10840 | 57.494 | 407 | 147 | 8 | 63 | 458 | 5 | 396 | 2.48e-154 | 444 |
| MS.gene06557.t1 | AT3G10840 | 59.326 | 386 | 135 | 7 | 84 | 458 | 8 | 382 | 6.89e-154 | 442 |
| MS.gene06557.t1 | AT3G10840 | 59.326 | 386 | 135 | 7 | 84 | 458 | 8 | 382 | 6.89e-154 | 442 |
| MS.gene06557.t1 | AT1G15490 | 27.034 | 381 | 213 | 12 | 77 | 449 | 164 | 487 | 4.40e-27 | 114 |
| MS.gene06557.t1 | AT1G15490 | 27.034 | 381 | 213 | 12 | 77 | 449 | 245 | 568 | 6.24e-27 | 114 |
| MS.gene06557.t1 | AT1G15490 | 27.110 | 391 | 217 | 13 | 77 | 459 | 316 | 646 | 1.19e-26 | 113 |
| MS.gene06557.t1 | AT1G80280 | 27.895 | 380 | 202 | 13 | 79 | 449 | 326 | 642 | 3.24e-26 | 112 |
| MS.gene06557.t1 | AT1G52750 | 28.221 | 326 | 176 | 9 | 127 | 449 | 356 | 626 | 4.53e-23 | 102 |
| MS.gene06557.t1 | AT1G15490 | 31.447 | 159 | 97 | 5 | 77 | 230 | 316 | 467 | 1.82e-12 | 69.7 |
Find 100 sgRNAs with CRISPR-Local
Find 177 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTCTGAATTGTGGACAAT+TGG | 0.271000 | 3.2:-78539323 | MS.gene06557:CDS |
| ATTCACTGCTGCAATGCTTC+TGG | 0.272675 | 3.2:-78537025 | MS.gene06557:CDS |
| CCCCACTAAAATTGCCTTCT+CGG | 0.277300 | 3.2:+78538576 | None:intergenic |
| TCACGATATTTGCTTCTTCA+TGG | 0.284256 | 3.2:-78539246 | MS.gene06557:CDS |
| ATCCAATTGTTGGACTTTAC+AGG | 0.285682 | 3.2:-78537775 | MS.gene06557:CDS |
| TTGTTATGAGAAGCATAATT+TGG | 0.289447 | 3.2:+78539220 | None:intergenic |
| AACTGTTGTCTTCTTTCCTT+TGG | 0.297738 | 3.2:+78537810 | None:intergenic |
| TCTTCTTCCCTCGGTGGTTC+AGG | 0.303294 | 3.2:-78539178 | MS.gene06557:intron |
| ACATGCTCAGAGACCTGTTT+TGG | 0.311785 | 3.2:+78537221 | None:intergenic |
| CAATTGTTGAAAACTTTCTA+AGG | 0.319019 | 3.2:-78536685 | MS.gene06557:CDS |
| CAGCGTTTGGATTGACATCT+AGG | 0.331482 | 3.2:-78538699 | MS.gene06557:CDS |
| TCTATCCTGCGTTCTTCCCC+TGG | 0.359604 | 3.2:-78537653 | MS.gene06557:CDS |
| CATGAATGTGTAGAGCTAAT+AGG | 0.364385 | 3.2:+78539289 | None:intergenic |
| ATTAGAGCAGCAACCCGTTC+AGG | 0.371410 | 3.2:+78537902 | None:intergenic |
| GCCATGGAGTATGCATTTAG+AGG | 0.382748 | 3.2:+78538643 | None:intergenic |
| TTGTACAAAATTCATGTTAC+GGG | 0.385371 | 3.2:+78536626 | None:intergenic |
| ATGATTCTGTTGCATGGATT+CGG | 0.385624 | 3.2:-78538802 | MS.gene06557:CDS |
| CAGCTTGTTGGTTTGTGCTT+GGG | 0.390201 | 3.2:+78538834 | None:intergenic |
| TTCAGAGCAGTTGTTGGATG+TGG | 0.391657 | 3.2:-78539007 | MS.gene06557:intron |
| GCCATTGAGGGTTAAGGATT+GGG | 0.400126 | 3.2:-78537064 | MS.gene06557:CDS |
| AAATTCATGTTACGGGTTGT+AGG | 0.405204 | 3.2:+78536633 | None:intergenic |
| GTCACACGAAATCCAATTGT+TGG | 0.405598 | 3.2:-78537785 | MS.gene06557:CDS |
| GTAAACTTAACTTCTGGAAA+TGG | 0.406321 | 3.2:-78538676 | MS.gene06557:CDS |
| GTGATCGACTAGTTCCTTCA+TGG | 0.407021 | 3.2:-78536808 | MS.gene06557:CDS |
| GCTTCTGCTTCTTCTTCCCT+CGG | 0.411248 | 3.2:-78539187 | MS.gene06557:CDS |
| TGCAATGTACATGATAATCT+TGG | 0.413417 | 3.2:+78537745 | None:intergenic |
| AATGCAGCCATTGAGGGTTA+AGG | 0.418759 | 3.2:-78537070 | MS.gene06557:intron |
| TCTGGATCAGCTAATAGCTT+TGG | 0.418943 | 3.2:+78538928 | None:intergenic |
| AGAAAATTGGGTGTAGTAAG+TGG | 0.424399 | 3.2:+78537854 | None:intergenic |
| AGAATGGCAATTGATAAGTT+TGG | 0.426361 | 3.2:-78537275 | MS.gene06557:CDS |
| GCATTGAATGCAGCCATTGA+GGG | 0.446087 | 3.2:-78537076 | MS.gene06557:intron |
| AATCCATGCAACAGAATCAT+AGG | 0.447499 | 3.2:+78538805 | None:intergenic |
| GTCTCTGAGCATGTCCTTAG+TGG | 0.450535 | 3.2:-78537212 | MS.gene06557:CDS |
| TCTCTGAATTGTGGACAATT+GGG | 0.453789 | 3.2:-78539322 | MS.gene06557:CDS |
| ATATTTCGAAGCTCCTGAAC+GGG | 0.453927 | 3.2:-78537915 | MS.gene06557:CDS |
| TCTAGGGTAAACTTAACTTC+TGG | 0.455409 | 3.2:-78538682 | MS.gene06557:CDS |
| TTGTGCTTGGGAATGAGATT+CGG | 0.459568 | 3.2:+78538846 | None:intergenic |
| CATAGGCAAACACAGCTTGT+TGG | 0.461823 | 3.2:+78538822 | None:intergenic |
| TGCTGCAATGCTTCTGGACG+AGG | 0.462142 | 3.2:-78537019 | MS.gene06557:CDS |
| AGCCATTGAGGGTTAAGGAT+TGG | 0.464429 | 3.2:-78537065 | MS.gene06557:CDS |
| CTTGTACAAAATTCATGTTA+CGG | 0.468317 | 3.2:+78536625 | None:intergenic |
| GAACATGTAGCCTCGGCTAA+AGG | 0.470554 | 3.2:+78538745 | None:intergenic |
| ATGTGGGATCAAAGAAGAAA+AGG | 0.473757 | 3.2:-78538990 | MS.gene06557:CDS |
| AAGAAAAGGAAAGAGATAGC+TGG | 0.481075 | 3.2:-78538976 | MS.gene06557:CDS |
| AGAGATAGCTGGAATAGATC+AGG | 0.481817 | 3.2:-78538965 | MS.gene06557:CDS |
| TCCCAATCCTTAACCCTCAA+TGG | 0.484351 | 3.2:+78537063 | None:intergenic |
| TTCATGGTATGATCCAAAAC+AGG | 0.485270 | 3.2:-78537234 | MS.gene06557:CDS |
| TAAGGATTGGGATAGGGCAC+TGG | 0.491068 | 3.2:-78537052 | MS.gene06557:CDS |
| AGAAGAAGCAGAAGCAATGA+AGG | 0.493901 | 3.2:+78539195 | None:intergenic |
| TTGTTGTTCAGAGCAGTTGT+TGG | 0.494913 | 3.2:-78539013 | MS.gene06557:intron |
| AACCTGTAAAGTCCAACAAT+TGG | 0.497943 | 3.2:+78537773 | None:intergenic |
| TTGCCTATGATTCTGTTGCA+TGG | 0.498619 | 3.2:-78538808 | MS.gene06557:CDS |
| GTTGCATGGATTCGGAGCCT+CGG | 0.501535 | 3.2:-78538794 | MS.gene06557:CDS |
| CTGCTGCAGTTCGAAATTCA+TGG | 0.508279 | 3.2:-78537250 | MS.gene06557:CDS |
| ACAGCTTGTTGGTTTGTGCT+TGG | 0.518623 | 3.2:+78538833 | None:intergenic |
| ATATGAATCTCAGGTAAGAA+TGG | 0.520846 | 3.2:-78537291 | MS.gene06557:intron |
| GAGGGTTAAGGATTGGGATA+GGG | 0.521224 | 3.2:-78537058 | MS.gene06557:CDS |
| AAGAGAATCTCTCTGAATTG+TGG | 0.523614 | 3.2:-78539331 | MS.gene06557:CDS |
| ATTACTTCAAACGATGCTCC+TGG | 0.525094 | 3.2:+78536758 | None:intergenic |
| AACTTTCTAAGGAGACTAGC+TGG | 0.528709 | 3.2:-78536674 | MS.gene06557:CDS |
| GCAAATATCGTGAAACGTGA+AGG | 0.529725 | 3.2:+78539256 | None:intergenic |
| TGTGCAGTTCTGATTGTAAC+CGG | 0.531619 | 3.2:-78536836 | MS.gene06557:intron |
| TGAGGGTTAAGGATTGGGAT+AGG | 0.534539 | 3.2:-78537059 | MS.gene06557:CDS |
| CTATCCTGCGTTCTTCCCCT+GGG | 0.534716 | 3.2:-78537652 | MS.gene06557:CDS |
| TGCTCTAATCCTAATTGCCC+CGG | 0.536471 | 3.2:-78537888 | MS.gene06557:CDS |
| AGCATTGAATGCAGCCATTG+AGG | 0.536896 | 3.2:-78537077 | MS.gene06557:intron |
| TTACCTTTGTATAACCACTA+AGG | 0.537196 | 3.2:+78537198 | None:intergenic |
| TGATATGTCAGGCACTCAGC+TGG | 0.545480 | 3.2:-78537959 | MS.gene06557:intron |
| TTTCTAAAAGAATCGGGAGA+AGG | 0.549471 | 3.2:-78537836 | MS.gene06557:CDS |
| TTCTTCCCCTGGGATAATGC+TGG | 0.549567 | 3.2:-78537642 | MS.gene06557:intron |
| CTGAATGAAATATCTTGTCC+TGG | 0.551019 | 3.2:-78536964 | MS.gene06557:intron |
| CATCATATTCATATATCTTG+TGG | 0.560644 | 3.2:+78538869 | None:intergenic |
| TCAGAGCAGTTGTTGGATGT+GGG | 0.561730 | 3.2:-78539006 | MS.gene06557:intron |
| TGATTTATTAAAAGCCGAGA+AGG | 0.563100 | 3.2:-78538590 | MS.gene06557:CDS |
| GAATGTGTAGAGCTAATAGG+AGG | 0.565432 | 3.2:+78539292 | None:intergenic |
| TCCTCTAAATGCATACTCCA+TGG | 0.566442 | 3.2:-78538644 | MS.gene06557:CDS |
| GAGTTGAGTATATTTATCAT+CGG | 0.568376 | 3.2:+78537698 | None:intergenic |
| TGTATTACCAGCATTATCCC+AGG | 0.576948 | 3.2:+78537635 | None:intergenic |
| GGATTGGGATAGGGCACTGG+TGG | 0.577488 | 3.2:-78537049 | MS.gene06557:CDS |
| AACTAGTCGATCACTATCAC+CGG | 0.578562 | 3.2:+78536817 | None:intergenic |
| TCTGCTTCTTCTTCCCTCGG+TGG | 0.585534 | 3.2:-78539184 | MS.gene06557:CDS |
| AATCGGGAGAAGGCAACCAA+AGG | 0.588799 | 3.2:-78537826 | MS.gene06557:CDS |
| TAATAAATCAAAGAAATGCA+AGG | 0.589648 | 3.2:+78538603 | None:intergenic |
| TTATCCCAGGGGAAGAACGC+AGG | 0.590594 | 3.2:+78537648 | None:intergenic |
| AGCAAGCACTGAAAATGCCA+TGG | 0.593327 | 3.2:+78538627 | None:intergenic |
| AGCGTTTGGATTGACATCTA+GGG | 0.594356 | 3.2:-78538698 | MS.gene06557:CDS |
| AGTCTCTCAGCATTCCATGA+AGG | 0.600227 | 3.2:+78536794 | None:intergenic |
| CATATTTCGAAGCTCCTGAA+CGG | 0.602456 | 3.2:-78537916 | MS.gene06557:CDS |
| GATTATCATGTACATTGCAA+AGG | 0.604945 | 3.2:-78537741 | MS.gene06557:CDS |
| AATGTGTAGAGCTAATAGGA+GGG | 0.608106 | 3.2:+78539293 | None:intergenic |
| GTGAGGACCTGAACCACCGA+GGG | 0.621442 | 3.2:+78539171 | None:intergenic |
| GTATTACCAGCATTATCCCA+GGG | 0.631989 | 3.2:+78537636 | None:intergenic |
| AGACTTTCAAGAGTCATACC+AGG | 0.641737 | 3.2:-78536776 | MS.gene06557:CDS |
| TGTTATGAAGCCTTTAGCCG+AGG | 0.647035 | 3.2:-78538755 | MS.gene06557:CDS |
| TTTGAAGTAATTAAGCAATG+TGG | 0.647419 | 3.2:-78536746 | MS.gene06557:CDS |
| CTAGATGTCAATCCAAACGC+TGG | 0.647574 | 3.2:+78538700 | None:intergenic |
| ATGTGTAGAGCTAATAGGAG+GGG | 0.657191 | 3.2:+78539294 | None:intergenic |
| TGTCCTTAGTGGTTATACAA+AGG | 0.659738 | 3.2:-78537201 | MS.gene06557:intron |
| AGTGAGGACCTGAACCACCG+AGG | 0.734066 | 3.2:+78539170 | None:intergenic |
| TATTACCAGCATTATCCCAG+GGG | 0.766035 | 3.2:+78537637 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAGAAAAAATATTTCATTA+AGG | + | chr3.2:78539046-78539065 | None:intergenic | 15.0% |
| !! | CAGAAAAAATATTTCATTAA+GGG | + | chr3.2:78539045-78539064 | None:intergenic | 15.0% |
| !!! | CTGTAATATTTTAAAATCTA+AGG | - | chr3.2:78537630-78537649 | MS.gene06557:intron | 15.0% |
| !! | ATAATAATCGAAAAGAAACA+TGG | - | chr3.2:78538416-78538435 | MS.gene06557:intron | 20.0% |
| !! | TAATAAATCAAAGAAATGCA+AGG | + | chr3.2:78537371-78537390 | None:intergenic | 20.0% |
| !! | TAGTTACAGAATATGAAAAT+AGG | + | chr3.2:78538818-78538837 | None:intergenic | 20.0% |
| !! | TTTGGAAACTTATAAGAAAA+GGG | + | chr3.2:78537991-78538010 | None:intergenic | 20.0% |
| !!! | TTTTGGAAACTTATAAGAAA+AGG | + | chr3.2:78537992-78538011 | None:intergenic | 20.0% |
| ! | ACTTATTTGATCTTCTTTAC+TGG | - | chr3.2:78537667-78537686 | MS.gene06557:CDS | 25.0% |
| ! | AGACGTTAAAACTGTATAAT+TGG | - | chr3.2:78537914-78537933 | MS.gene06557:CDS | 25.0% |
| ! | ATCTCTAACAAAACAAACAA+TGG | + | chr3.2:78536847-78536866 | None:intergenic | 25.0% |
| ! | CAATTGTTGAAAACTTTCTA+AGG | - | chr3.2:78539286-78539305 | MS.gene06557:CDS | 25.0% |
| ! | CATCATATTCATATATCTTG+TGG | + | chr3.2:78537105-78537124 | None:intergenic | 25.0% |
| ! | GAGAATATAACACTTTCAAT+TGG | + | chr3.2:78537948-78537967 | None:intergenic | 25.0% |
| ! | GAGTTGAGTATATTTATCAT+CGG | + | chr3.2:78538276-78538295 | None:intergenic | 25.0% |
| ! | TGAGATTCATATGAAAGAAA+GGG | + | chr3.2:78538672-78538691 | None:intergenic | 25.0% |
| ! | TGGTCATGACAAATTATATA+TGG | + | chr3.2:78538637-78538656 | None:intergenic | 25.0% |
| ! | TTCCAATAATGATATGTAAC+TGG | + | chr3.2:78538393-78538412 | None:intergenic | 25.0% |
| ! | TTCCAGTTACATATCATTAT+TGG | - | chr3.2:78538388-78538407 | MS.gene06557:intron | 25.0% |
| !! | TTGTTATGAGAAGCATAATT+TGG | + | chr3.2:78536754-78536773 | None:intergenic | 25.0% |
| !! | TTTGAAGTAATTAAGCAATG+TGG | - | chr3.2:78539225-78539244 | MS.gene06557:CDS | 25.0% |
| !!! | ACCCAATTTTCTAAAAGAAT+CGG | - | chr3.2:78538128-78538147 | MS.gene06557:intron | 25.0% |
| AACATCCGTCTGAAAAATAA+GGG | + | chr3.2:78537451-78537470 | None:intergenic | 30.0% | |
| AACTCACAAAAACAACTATC+TGG | + | chr3.2:78537064-78537083 | None:intergenic | 30.0% | |
| AATATCACCAATTATGACCA+AGG | + | chr3.2:78539108-78539127 | None:intergenic | 30.0% | |
| AGAATGGCAATTGATAAGTT+TGG | - | chr3.2:78538696-78538715 | MS.gene06557:CDS | 30.0% | |
| AGTTTCCAAAATGATATGTC+AGG | - | chr3.2:78538001-78538020 | MS.gene06557:intron | 30.0% | |
| ATATGAATCTCAGGTAAGAA+TGG | - | chr3.2:78538680-78538699 | MS.gene06557:CDS | 30.0% | |
| ATGAAAACAACTTATGGTCA+TGG | + | chr3.2:78537757-78537776 | None:intergenic | 30.0% | |
| CCTGTAAATGTAAAATTCAG+AGG | + | chr3.2:78537593-78537612 | None:intergenic | 30.0% | |
| CTGAGATTCATATGAAAGAA+AGG | + | chr3.2:78538673-78538692 | None:intergenic | 30.0% | |
| CTTTCTTTCATATGAATCTC+AGG | - | chr3.2:78538671-78538690 | MS.gene06557:CDS | 30.0% | |
| GAAAAAGGTCTTTATCGTAT+AGG | + | chr3.2:78537867-78537886 | None:intergenic | 30.0% | |
| GATTATCATGTACATTGCAA+AGG | - | chr3.2:78538230-78538249 | MS.gene06557:intron | 30.0% | |
| TGATTTATTAAAAGCCGAGA+AGG | - | chr3.2:78537381-78537400 | MS.gene06557:intron | 30.0% | |
| TGCAATGTACATGATAATCT+TGG | + | chr3.2:78538229-78538248 | None:intergenic | 30.0% | |
| TTACACATATCTAGATGCTT+TGG | + | chr3.2:78537560-78537579 | None:intergenic | 30.0% | |
| TTACAGTTGTATCAATGCAT+TGG | + | chr3.2:78537616-78537635 | None:intergenic | 30.0% | |
| TTACCTTTGTATAACCACTA+AGG | + | chr3.2:78538776-78538795 | None:intergenic | 30.0% | |
| TTTGCCACATGAAGAAAAAA+TGG | - | chr3.2:78539251-78539270 | MS.gene06557:CDS | 30.0% | |
| ! | ATATAATTTGTCATGACCAC+TGG | - | chr3.2:78538638-78538657 | MS.gene06557:CDS | 30.0% |
| ! | CATGAAGACAAGGAATTTTA+AGG | + | chr3.2:78538503-78538522 | None:intergenic | 30.0% |
| ! | CCTCTGAATTTTACATTTAC+AGG | - | chr3.2:78537590-78537609 | MS.gene06557:intron | 30.0% |
| ! | GGAACATTGATTGAATGAAA+AGG | + | chr3.2:78538482-78538501 | None:intergenic | 30.0% |
| ! | GTAAACTTAACTTCTGGAAA+TGG | - | chr3.2:78537295-78537314 | MS.gene06557:intron | 30.0% |
| !! | AAAAATAAGGGCACTAAAAC+AGG | + | chr3.2:78537439-78537458 | None:intergenic | 30.0% |
| !! | CCCAATTTTCTAAAAGAATC+GGG | - | chr3.2:78538129-78538148 | MS.gene06557:intron | 30.0% |
| !! | CCCGATTCTTTTAGAAAATT+GGG | + | chr3.2:78538132-78538151 | None:intergenic | 30.0% |
| !! | GAAGAAGGTTAAGTTGAAAA+AGG | + | chr3.2:78537882-78537901 | None:intergenic | 30.0% |
| !! | GTTTTAACGTCTGATTTCAA+TGG | + | chr3.2:78537906-78537925 | None:intergenic | 30.0% |
| !! | TCCCGATTCTTTTAGAAAAT+TGG | + | chr3.2:78538133-78538152 | None:intergenic | 30.0% |
| !! | TTCAGTCTTTTAGAAAGTTC+TGG | + | chr3.2:78538992-78539011 | None:intergenic | 30.0% |
| !!! | AGTTGTTTTTGTGAGTTCAA+AGG | - | chr3.2:78537067-78537086 | MS.gene06557:intron | 30.0% |
| !!! | CAAAAGTTCTAGCTTTTGAT+AGG | - | chr3.2:78537248-78537267 | MS.gene06557:CDS | 30.0% |
| !!! | TTTTTTCTTCATGTGGCAAA+TGG | + | chr3.2:78539251-78539270 | None:intergenic | 30.0% |
| AACCTGTAAAGTCCAACAAT+TGG | + | chr3.2:78538201-78538220 | None:intergenic | 35.0% | |
| AACTGTTGTCTTCTTTCCTT+TGG | + | chr3.2:78538164-78538183 | None:intergenic | 35.0% | |
| AAGAAAAGGAAAGAGATAGC+TGG | - | chr3.2:78536995-78537014 | MS.gene06557:CDS | 35.0% | |
| AAGAGAATCTCTCTGAATTG+TGG | - | chr3.2:78536640-78536659 | MS.gene06557:CDS | 35.0% | |
| AATCCATGCAACAGAATCAT+AGG | + | chr3.2:78537169-78537188 | None:intergenic | 35.0% | |
| AATGTGTAGAGCTAATAGGA+GGG | + | chr3.2:78536681-78536700 | None:intergenic | 35.0% | |
| AGAAAATTGGGTGTAGTAAG+TGG | + | chr3.2:78538120-78538139 | None:intergenic | 35.0% | |
| AGTTGAACCTTGGTCATAAT+TGG | - | chr3.2:78539098-78539117 | MS.gene06557:intron | 35.0% | |
| ATCCAATTGTTGGACTTTAC+AGG | - | chr3.2:78538196-78538215 | MS.gene06557:intron | 35.0% | |
| ATGATTCTGTTGCATGGATT+CGG | - | chr3.2:78537169-78537188 | MS.gene06557:intron | 35.0% | |
| ATGTGGGATCAAAGAAGAAA+AGG | - | chr3.2:78536981-78537000 | MS.gene06557:CDS | 35.0% | |
| CAACATCCGTCTGAAAAATA+AGG | + | chr3.2:78537452-78537471 | None:intergenic | 35.0% | |
| CAGCTATGTGAGGAAAAATA+TGG | - | chr3.2:78538535-78538554 | MS.gene06557:intron | 35.0% | |
| CATGAATGTGTAGAGCTAAT+AGG | + | chr3.2:78536685-78536704 | None:intergenic | 35.0% | |
| CTGAATGAAATATCTTGTCC+TGG | - | chr3.2:78539007-78539026 | MS.gene06557:intron | 35.0% | |
| CTGTTGTGTAAAGATCTAAC+TGG | - | chr3.2:78539062-78539081 | MS.gene06557:intron | 35.0% | |
| GAGAGGATGAAAACAACTTA+TGG | + | chr3.2:78537763-78537782 | None:intergenic | 35.0% | |
| GTATAGATAGAAGAAGAGTG+AGG | + | chr3.2:78536820-78536839 | None:intergenic | 35.0% | |
| TATGTATGGACATGAAGACA+AGG | + | chr3.2:78538513-78538532 | None:intergenic | 35.0% | |
| TCAAATAGTCTGTGCTTACT+GGG | - | chr3.2:78538867-78538886 | MS.gene06557:CDS | 35.0% | |
| TCACGATATTTGCTTCTTCA+TGG | - | chr3.2:78536725-78536744 | MS.gene06557:CDS | 35.0% | |
| TCTCTGAATTGTGGACAATT+GGG | - | chr3.2:78536649-78536668 | MS.gene06557:CDS | 35.0% | |
| TCTGATTTCAATGGAGAAGA+AGG | + | chr3.2:78537897-78537916 | None:intergenic | 35.0% | |
| TGTCCTTAGTGGTTATACAA+AGG | - | chr3.2:78538770-78538789 | MS.gene06557:CDS | 35.0% | |
| TTCATGGTATGATCCAAAAC+AGG | - | chr3.2:78538737-78538756 | MS.gene06557:CDS | 35.0% | |
| ! | AACTTTTGAACATGTAGCCT+CGG | + | chr3.2:78537236-78537255 | None:intergenic | 35.0% |
| ! | ATTTTTCCAAGAGAAAACCG+AGG | + | chr3.2:78537197-78537216 | None:intergenic | 35.0% |
| ! | TAGGTGACTTTTGTGAATCT+AGG | - | chr3.2:78537473-78537492 | MS.gene06557:intron | 35.0% |
| ! | TCTAGGGTAAACTTAACTTC+TGG | - | chr3.2:78537289-78537308 | MS.gene06557:intron | 35.0% |
| ! | TTTCTAAAAGAATCGGGAGA+AGG | - | chr3.2:78538135-78538154 | MS.gene06557:intron | 35.0% |
| !! | GTTGTTTTCATAAGCTATCC+TGG | + | chr3.2:78537785-78537804 | None:intergenic | 35.0% |
| !! | TTTTTCAGACGGATGTTGTT+AGG | - | chr3.2:78537454-78537473 | MS.gene06557:intron | 35.0% |
| !!! | TAGTGCCCTTATTTTTCAGA+CGG | - | chr3.2:78537443-78537462 | MS.gene06557:intron | 35.0% |
| !!! | TCCTCCATTTTTTCTTCATG+TGG | + | chr3.2:78539258-78539277 | None:intergenic | 35.0% |
| AACTAGTCGATCACTATCAC+CGG | + | chr3.2:78539157-78539176 | None:intergenic | 40.0% | |
| AGAAGAAGCAGAAGCAATGA+AGG | + | chr3.2:78536779-78536798 | None:intergenic | 40.0% | |
| AGACTTTCAAGAGTCATACC+AGG | - | chr3.2:78539195-78539214 | MS.gene06557:CDS | 40.0% | |
| AGAGATAGCTGGAATAGATC+AGG | - | chr3.2:78537006-78537025 | MS.gene06557:CDS | 40.0% | |
| AGCGTTTGGATTGACATCTA+GGG | - | chr3.2:78537273-78537292 | MS.gene06557:CDS | 40.0% | |
| ATATTTCGAAGCTCCTGAAC+GGG | - | chr3.2:78538056-78538075 | MS.gene06557:intron | 40.0% | |
| ATGTGTAGAGCTAATAGGAG+GGG | + | chr3.2:78536680-78536699 | None:intergenic | 40.0% | |
| ATTACTTCAAACGATGCTCC+TGG | + | chr3.2:78539216-78539235 | None:intergenic | 40.0% | |
| CATACATAGTCAGCTATGTG+AGG | - | chr3.2:78538525-78538544 | MS.gene06557:intron | 40.0% | |
| CATATTTCGAAGCTCCTGAA+CGG | - | chr3.2:78538055-78538074 | MS.gene06557:intron | 40.0% | |
| CTCAAATAGTCTGTGCTTAC+TGG | - | chr3.2:78538866-78538885 | MS.gene06557:CDS | 40.0% | |
| CTCACATAGCTGACTATGTA+TGG | + | chr3.2:78538527-78538546 | None:intergenic | 40.0% | |
| CTCTCTGAATTGTGGACAAT+TGG | - | chr3.2:78536648-78536667 | MS.gene06557:CDS | 40.0% | |
| GAAAAGGGACTACAATGTAG+AGG | + | chr3.2:78537976-78537995 | None:intergenic | 40.0% | |
| GAATGTGTAGAGCTAATAGG+AGG | + | chr3.2:78536682-78536701 | None:intergenic | 40.0% | |
| GCAAATATCGTGAAACGTGA+AGG | + | chr3.2:78536718-78536737 | None:intergenic | 40.0% | |
| GCCACATGAAGAAAAAATGG+AGG | - | chr3.2:78539254-78539273 | MS.gene06557:CDS | 40.0% | |
| GTAAGTGGAGCAAAAATTGC+CGG | + | chr3.2:78538105-78538124 | None:intergenic | 40.0% | |
| GTATTACCAGCATTATCCCA+GGG | + | chr3.2:78538338-78538357 | None:intergenic | 40.0% | |
| GTCACACGAAATCCAATTGT+TGG | - | chr3.2:78538186-78538205 | MS.gene06557:intron | 40.0% | |
| TAAGTGGAGCAAAAATTGCC+GGG | + | chr3.2:78538104-78538123 | None:intergenic | 40.0% | |
| TATGACCAAGGTTCAACTTG+AGG | + | chr3.2:78539096-78539115 | None:intergenic | 40.0% | |
| TATTACCAGCATTATCCCAG+GGG | + | chr3.2:78538337-78538356 | None:intergenic | 40.0% | |
| TCCTCTAAATGCATACTCCA+TGG | - | chr3.2:78537327-78537346 | MS.gene06557:intron | 40.0% | |
| TCTGGATCAGCTAATAGCTT+TGG | + | chr3.2:78537046-78537065 | None:intergenic | 40.0% | |
| TGTATTACCAGCATTATCCC+AGG | + | chr3.2:78538339-78538358 | None:intergenic | 40.0% | |
| TTGCCTATGATTCTGTTGCA+TGG | - | chr3.2:78537163-78537182 | MS.gene06557:intron | 40.0% | |
| TTGTGCTTGGGAATGAGATT+CGG | + | chr3.2:78537128-78537147 | None:intergenic | 40.0% | |
| TTTCATAAGCTATCCTGGAG+AGG | + | chr3.2:78537780-78537799 | None:intergenic | 40.0% | |
| ! | AACTTTCTAAGGAGACTAGC+TGG | - | chr3.2:78539297-78539316 | MS.gene06557:CDS | 40.0% |
| ! | GAGTGCCTGACATATCATTT+TGG | + | chr3.2:78538009-78538028 | None:intergenic | 40.0% |
| ! | TGTGCAGTTCTGATTGTAAC+CGG | - | chr3.2:78539135-78539154 | MS.gene06557:intron | 40.0% |
| ! | TTGTTGTTCAGAGCAGTTGT+TGG | - | chr3.2:78536958-78536977 | MS.gene06557:intron | 40.0% |
| !! | AAGTTGTTTTCATCCTCTCC+AGG | - | chr3.2:78537764-78537783 | MS.gene06557:CDS | 40.0% |
| AAGTGGAGCAAAAATTGCCG+GGG | + | chr3.2:78538103-78538122 | None:intergenic | 45.0% | |
| AATGCAGCCATTGAGGGTTA+AGG | - | chr3.2:78538901-78538920 | MS.gene06557:CDS | 45.0% | |
| AGCCATTGAGGGTTAAGGAT+TGG | - | chr3.2:78538906-78538925 | MS.gene06557:CDS | 45.0% | |
| AGTCTCTCAGCATTCCATGA+AGG | + | chr3.2:78539180-78539199 | None:intergenic | 45.0% | |
| ATTCACTGCTGCAATGCTTC+TGG | - | chr3.2:78538946-78538965 | MS.gene06557:CDS | 45.0% | |
| CAAAAATTGCCGGGGCAATT+AGG | + | chr3.2:78538095-78538114 | None:intergenic | 45.0% | |
| CAGCGTTTGGATTGACATCT+AGG | - | chr3.2:78537272-78537291 | MS.gene06557:CDS | 45.0% | |
| CATAGGCAAACACAGCTTGT+TGG | + | chr3.2:78537152-78537171 | None:intergenic | 45.0% | |
| CCCCACTAAAATTGCCTTCT+CGG | + | chr3.2:78537398-78537417 | None:intergenic | 45.0% | |
| CTAGATGTCAATCCAAACGC+TGG | + | chr3.2:78537274-78537293 | None:intergenic | 45.0% | |
| CTGCTGCAGTTCGAAATTCA+TGG | - | chr3.2:78538721-78538740 | MS.gene06557:CDS | 45.0% | |
| GAGGGTTAAGGATTGGGATA+GGG | - | chr3.2:78538913-78538932 | MS.gene06557:CDS | 45.0% | |
| GCATTGAATGCAGCCATTGA+GGG | - | chr3.2:78538895-78538914 | MS.gene06557:CDS | 45.0% | |
| GCCATGGAGTATGCATTTAG+AGG | + | chr3.2:78537331-78537350 | None:intergenic | 45.0% | |
| GCCATTGAGGGTTAAGGATT+GGG | - | chr3.2:78538907-78538926 | MS.gene06557:CDS | 45.0% | |
| TAAGGGTCAGTGAAATCACC+AGG | + | chr3.2:78539028-78539047 | None:intergenic | 45.0% | |
| TCAGAGCAGTTGTTGGATGT+GGG | - | chr3.2:78536965-78536984 | MS.gene06557:CDS | 45.0% | |
| TCCCAATCCTTAACCCTCAA+TGG | + | chr3.2:78538911-78538930 | None:intergenic | 45.0% | |
| TGAGGGTTAAGGATTGGGAT+AGG | - | chr3.2:78538912-78538931 | MS.gene06557:CDS | 45.0% | |
| TGCTCTAATCCTAATTGCCC+CGG | - | chr3.2:78538083-78538102 | MS.gene06557:intron | 45.0% | |
| TGTCATGACCACTGGACTAA+TGG | - | chr3.2:78538646-78538665 | MS.gene06557:CDS | 45.0% | |
| TGTTATGAAGCCTTTAGCCG+AGG | - | chr3.2:78537216-78537235 | MS.gene06557:CDS | 45.0% | |
| TTCAGAGCAGTTGTTGGATG+TGG | - | chr3.2:78536964-78536983 | MS.gene06557:intron | 45.0% | |
| ! | ACATGCTCAGAGACCTGTTT+TGG | + | chr3.2:78538753-78538772 | None:intergenic | 45.0% |
| ! | AGCATTGAATGCAGCCATTG+AGG | - | chr3.2:78538894-78538913 | MS.gene06557:CDS | 45.0% |
| ! | AGCCGAGAAGGCAATTTTAG+TGG | - | chr3.2:78537393-78537412 | MS.gene06557:intron | 45.0% |
| ! | GTGATCGACTAGTTCCTTCA+TGG | - | chr3.2:78539163-78539182 | MS.gene06557:intron | 45.0% |
| !! | ACAGCTTGTTGGTTTGTGCT+TGG | + | chr3.2:78537141-78537160 | None:intergenic | 45.0% |
| !! | AGCAAGCACTGAAAATGCCA+TGG | + | chr3.2:78537347-78537366 | None:intergenic | 45.0% |
| !! | CAGCTTGTTGGTTTGTGCTT+GGG | + | chr3.2:78537140-78537159 | None:intergenic | 45.0% |
| !! | CATAGCCTCAAGTTGAACCT+TGG | - | chr3.2:78539088-78539107 | MS.gene06557:intron | 45.0% |
| !! | CCGAGAAGGCAATTTTAGTG+GGG | - | chr3.2:78537395-78537414 | MS.gene06557:intron | 45.0% |
| !! | GCCGAGAAGGCAATTTTAGT+GGG | - | chr3.2:78537394-78537413 | MS.gene06557:intron | 45.0% |
| AATCGGGAGAAGGCAACCAA+AGG | - | chr3.2:78538145-78538164 | MS.gene06557:intron | 50.0% | |
| AGAAAGGGCCATTAGTCCAG+TGG | + | chr3.2:78538657-78538676 | None:intergenic | 50.0% | |
| ATTAGAGCAGCAACCCGTTC+AGG | + | chr3.2:78538072-78538091 | None:intergenic | 50.0% | |
| GAACATGTAGCCTCGGCTAA+AGG | + | chr3.2:78537229-78537248 | None:intergenic | 50.0% | |
| GCTTCTGCTTCTTCTTCCCT+CGG | - | chr3.2:78536784-78536803 | MS.gene06557:CDS | 50.0% | |
| GTCTCTGAGCATGTCCTTAG+TGG | - | chr3.2:78538759-78538778 | MS.gene06557:CDS | 50.0% | |
| TAAGGATTGGGATAGGGCAC+TGG | - | chr3.2:78538919-78538938 | MS.gene06557:CDS | 50.0% | |
| TGATATGTCAGGCACTCAGC+TGG | - | chr3.2:78538012-78538031 | MS.gene06557:intron | 50.0% | |
| TTCTTCCCCTGGGATAATGC+TGG | - | chr3.2:78538329-78538348 | MS.gene06557:intron | 50.0% | |
| ! | GCTTTTGATAGGCCAGCGTT+TGG | - | chr3.2:78537259-78537278 | MS.gene06557:CDS | 50.0% |
| CTATCCTGCGTTCTTCCCCT+GGG | - | chr3.2:78538319-78538338 | MS.gene06557:intron | 55.0% | |
| GTTGCATGGATTCGGAGCCT+CGG | - | chr3.2:78537177-78537196 | MS.gene06557:intron | 55.0% | |
| TCTATCCTGCGTTCTTCCCC+TGG | - | chr3.2:78538318-78538337 | MS.gene06557:intron | 55.0% | |
| TCTGCTTCTTCTTCCCTCGG+TGG | - | chr3.2:78536787-78536806 | MS.gene06557:CDS | 55.0% | |
| TCTTCTTCCCTCGGTGGTTC+AGG | - | chr3.2:78536793-78536812 | MS.gene06557:CDS | 55.0% | |
| TGCTGCAATGCTTCTGGACG+AGG | - | chr3.2:78538952-78538971 | MS.gene06557:CDS | 55.0% | |
| TTATCCCAGGGGAAGAACGC+AGG | + | chr3.2:78538326-78538345 | None:intergenic | 55.0% | |
| ! | TCGGAGCCTCGGTTTTCTCT+TGG | - | chr3.2:78537188-78537207 | MS.gene06557:intron | 55.0% |
| AGTGAGGACCTGAACCACCG+AGG | + | chr3.2:78536804-78536823 | None:intergenic | 60.0% | |
| GTGAGGACCTGAACCACCGA+GGG | + | chr3.2:78536803-78536822 | None:intergenic | 60.0% | |
| !! | GGATTGGGATAGGGCACTGG+TGG | - | chr3.2:78538922-78538941 | MS.gene06557:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 78536637 | 78539356 | 78536637 | ID=MS.gene06557 |
| chr3.2 | mRNA | 78536637 | 78539356 | 78536637 | ID=MS.gene06557.t1;Parent=MS.gene06557 |
| chr3.2 | exon | 78539179 | 78539356 | 78539179 | ID=MS.gene06557.t1.exon1;Parent=MS.gene06557.t1 |
| chr3.2 | CDS | 78539179 | 78539356 | 78539179 | ID=cds.MS.gene06557.t1;Parent=MS.gene06557.t1 |
| chr3.2 | exon | 78538577 | 78539024 | 78538577 | ID=MS.gene06557.t1.exon2;Parent=MS.gene06557.t1 |
| chr3.2 | CDS | 78538577 | 78539024 | 78538577 | ID=cds.MS.gene06557.t1;Parent=MS.gene06557.t1 |
| chr3.2 | exon | 78537643 | 78537970 | 78537643 | ID=MS.gene06557.t1.exon3;Parent=MS.gene06557.t1 |
| chr3.2 | CDS | 78537643 | 78537970 | 78537643 | ID=cds.MS.gene06557.t1;Parent=MS.gene06557.t1 |
| chr3.2 | exon | 78537202 | 78537300 | 78537202 | ID=MS.gene06557.t1.exon4;Parent=MS.gene06557.t1 |
| chr3.2 | CDS | 78537202 | 78537300 | 78537202 | ID=cds.MS.gene06557.t1;Parent=MS.gene06557.t1 |
| chr3.2 | exon | 78536965 | 78537085 | 78536965 | ID=MS.gene06557.t1.exon5;Parent=MS.gene06557.t1 |
| chr3.2 | CDS | 78536965 | 78537085 | 78536965 | ID=cds.MS.gene06557.t1;Parent=MS.gene06557.t1 |
| chr3.2 | exon | 78536637 | 78536851 | 78536637 | ID=MS.gene06557.t1.exon6;Parent=MS.gene06557.t1 |
| chr3.2 | CDS | 78536637 | 78536851 | 78536637 | ID=cds.MS.gene06557.t1;Parent=MS.gene06557.t1 |
| Gene Sequence |
| Protein sequence |
