Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63408.t1 | XP_013445627.1 | 97.9 | 579 | 12 | 0 | 1 | 579 | 1 | 579 | 0.00E+00 | 1140.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63408.t1 | A0A072TS21 | 97.9 | 579 | 12 | 0 | 1 | 579 | 1 | 579 | 0.0e+00 | 1140.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene63408 | 0.836565 | 8.69E-57 | -1.69E-46 |
| MS.gene049171 | MS.gene63408 | 0.898373 | 5.65E-77 | -1.69E-46 |
| MS.gene049173 | MS.gene63408 | 0.845751 | 3.34E-59 | -1.69E-46 |
| MS.gene049217 | MS.gene63408 | 0.847848 | 8.92E-60 | -1.69E-46 |
| MS.gene049222 | MS.gene63408 | 0.881299 | 2.69E-70 | -1.69E-46 |
| MS.gene049232 | MS.gene63408 | 0.811928 | 5.48E-51 | -1.69E-46 |
| MS.gene049285 | MS.gene63408 | 0.880955 | 3.58E-70 | -1.69E-46 |
| MS.gene049320 | MS.gene63408 | 0.850235 | 1.94E-60 | -1.69E-46 |
| MS.gene049609 | MS.gene63408 | 0.863631 | 2.17E-64 | -1.69E-46 |
| MS.gene049611 | MS.gene63408 | -0.801153 | 1.03E-48 | -1.69E-46 |
| MS.gene049633 | MS.gene63408 | 0.86767 | 1.15E-65 | -1.69E-46 |
| MS.gene049805 | MS.gene63408 | 0.823675 | 1.22E-53 | -1.69E-46 |
| MS.gene05010 | MS.gene63408 | 0.833649 | 4.72E-56 | -1.69E-46 |
| MS.gene050163 | MS.gene63408 | 0.83612 | 1.13E-56 | -1.69E-46 |
| MS.gene050165 | MS.gene63408 | 0.841258 | 5.30E-58 | -1.69E-46 |
| MS.gene050170 | MS.gene63408 | 0.880394 | 5.69E-70 | -1.69E-46 |
| MS.gene050323 | MS.gene63408 | 0.876702 | 1.13E-68 | -1.69E-46 |
| MS.gene050333 | MS.gene63408 | 0.840061 | 1.09E-57 | -1.69E-46 |
| MS.gene050338 | MS.gene63408 | -0.834584 | 2.75E-56 | -1.69E-46 |
| MS.gene050444 | MS.gene63408 | 0.877829 | 4.59E-69 | -1.69E-46 |
| MS.gene050496 | MS.gene63408 | 0.852431 | 4.64E-61 | -1.69E-46 |
| MS.gene050504 | MS.gene63408 | 0.867042 | 1.83E-65 | -1.69E-46 |
| MS.gene050518 | MS.gene63408 | 0.8193 | 1.25E-52 | -1.69E-46 |
| MS.gene050538 | MS.gene63408 | 0.811058 | 8.47E-51 | -1.69E-46 |
| MS.gene050577 | MS.gene63408 | 0.848534 | 5.76E-60 | -1.69E-46 |
| MS.gene050593 | MS.gene63408 | 0.800221 | 1.60E-48 | -1.69E-46 |
| MS.gene050612 | MS.gene63408 | 0.851076 | 1.12E-60 | -1.69E-46 |
| MS.gene050675 | MS.gene63408 | 0.847358 | 1.22E-59 | -1.69E-46 |
| MS.gene050699 | MS.gene63408 | 0.849819 | 2.53E-60 | -1.69E-46 |
| MS.gene050747 | MS.gene63408 | 0.856736 | 2.63E-62 | -1.69E-46 |
| MS.gene050772 | MS.gene63408 | 0.87505 | 4.18E-68 | -1.69E-46 |
| MS.gene05079 | MS.gene63408 | -0.805822 | 1.11E-49 | -1.69E-46 |
| MS.gene05080 | MS.gene63408 | 0.87605 | 1.90E-68 | -1.69E-46 |
| MS.gene05081 | MS.gene63408 | 0.863205 | 2.94E-64 | -1.69E-46 |
| MS.gene050868 | MS.gene63408 | 0.881275 | 2.75E-70 | -1.69E-46 |
| MS.gene050871 | MS.gene63408 | 0.87965 | 1.05E-69 | -1.69E-46 |
| MS.gene050876 | MS.gene63408 | 0.80376 | 2.99E-49 | -1.69E-46 |
| MS.gene050904 | MS.gene63408 | 0.858149 | 1.00E-62 | -1.69E-46 |
| MS.gene050950 | MS.gene63408 | 0.847229 | 1.32E-59 | -1.69E-46 |
| MS.gene050986 | MS.gene63408 | 0.822068 | 2.89E-53 | -1.69E-46 |
| MS.gene05100 | MS.gene63408 | 0.829405 | 5.24E-55 | -1.69E-46 |
| MS.gene05105 | MS.gene63408 | 0.806398 | 8.39E-50 | -1.69E-46 |
| MS.gene051138 | MS.gene63408 | -0.805362 | 1.38E-49 | -1.69E-46 |
| MS.gene051228 | MS.gene63408 | 0.810239 | 1.27E-50 | -1.69E-46 |
| MS.gene051268 | MS.gene63408 | 0.849683 | 2.76E-60 | -1.69E-46 |
| MS.gene051317 | MS.gene63408 | 0.835371 | 1.74E-56 | -1.69E-46 |
| MS.gene051438 | MS.gene63408 | 0.835196 | 1.93E-56 | -1.69E-46 |
| MS.gene051551 | MS.gene63408 | 0.824065 | 9.88E-54 | -1.69E-46 |
| MS.gene051617 | MS.gene63408 | 0.803611 | 3.21E-49 | -1.69E-46 |
| MS.gene051651 | MS.gene63408 | -0.831398 | 1.71E-55 | -1.69E-46 |
| MS.gene051666 | MS.gene63408 | 0.835736 | 1.41E-56 | -1.69E-46 |
| MS.gene051734 | MS.gene63408 | 0.83222 | 1.07E-55 | -1.69E-46 |
| MS.gene051810 | MS.gene63408 | 0.816016 | 6.87E-52 | -1.69E-46 |
| MS.gene051838 | MS.gene63408 | 0.889627 | 2.04E-73 | -1.69E-46 |
| MS.gene051858 | MS.gene63408 | 0.849862 | 2.46E-60 | -1.69E-46 |
| MS.gene051874 | MS.gene63408 | 0.846726 | 1.81E-59 | -1.69E-46 |
| MS.gene051941 | MS.gene63408 | 0.823789 | 1.15E-53 | -1.69E-46 |
| MS.gene051949 | MS.gene63408 | 0.846511 | 2.07E-59 | -1.69E-46 |
| MS.gene052129 | MS.gene63408 | -0.839473 | 1.55E-57 | -1.69E-46 |
| MS.gene052164 | MS.gene63408 | 0.871208 | 8.14E-67 | -1.69E-46 |
| MS.gene05240 | MS.gene63408 | -0.812413 | 4.29E-51 | -1.69E-46 |
| MS.gene052421 | MS.gene63408 | 0.805755 | 1.15E-49 | -1.69E-46 |
| MS.gene052482 | MS.gene63408 | 0.833886 | 4.12E-56 | -1.69E-46 |
| MS.gene052486 | MS.gene63408 | 0.83561 | 1.52E-56 | -1.69E-46 |
| MS.gene052501 | MS.gene63408 | 0.815643 | 8.32E-52 | -1.69E-46 |
| MS.gene052503 | MS.gene63408 | 0.868889 | 4.67E-66 | -1.69E-46 |
| MS.gene052506 | MS.gene63408 | 0.826376 | 2.81E-54 | -1.69E-46 |
| MS.gene052615 | MS.gene63408 | 0.841153 | 5.65E-58 | -1.69E-46 |
| MS.gene052822 | MS.gene63408 | 0.836897 | 7.15E-57 | -1.69E-46 |
| MS.gene052823 | MS.gene63408 | 0.863948 | 1.73E-64 | -1.69E-46 |
| MS.gene052825 | MS.gene63408 | 0.861521 | 9.68E-64 | -1.69E-46 |
| MS.gene052870 | MS.gene63408 | 0.902304 | 1.11E-78 | -1.69E-46 |
| MS.gene052872 | MS.gene63408 | 0.914381 | 2.05E-84 | -1.69E-46 |
| MS.gene052966 | MS.gene63408 | 0.838272 | 3.17E-57 | -1.69E-46 |
| MS.gene053203 | MS.gene63408 | 0.854959 | 8.69E-62 | -1.69E-46 |
| MS.gene053207 | MS.gene63408 | 0.817921 | 2.57E-52 | -1.69E-46 |
| MS.gene053213 | MS.gene63408 | 0.828989 | 6.62E-55 | -1.69E-46 |
| MS.gene053286 | MS.gene63408 | 0.826627 | 2.44E-54 | -1.69E-46 |
| MS.gene053420 | MS.gene63408 | -0.812406 | 4.31E-51 | -1.69E-46 |
| MS.gene053479 | MS.gene63408 | 0.873573 | 1.32E-67 | -1.69E-46 |
| MS.gene053480 | MS.gene63408 | 0.88588 | 5.55E-72 | -1.69E-46 |
| MS.gene053574 | MS.gene63408 | 0.843603 | 1.27E-58 | -1.69E-46 |
| MS.gene053626 | MS.gene63408 | 0.819246 | 1.28E-52 | -1.69E-46 |
| MS.gene053632 | MS.gene63408 | 0.877369 | 6.64E-69 | -1.69E-46 |
| MS.gene053776 | MS.gene63408 | -0.805306 | 1.42E-49 | -1.69E-46 |
| MS.gene053824 | MS.gene63408 | 0.92456 | 5.98E-90 | -1.69E-46 |
| MS.gene053916 | MS.gene63408 | 0.891114 | 5.34E-74 | -1.69E-46 |
| MS.gene054003 | MS.gene63408 | 0.80013 | 1.66E-48 | -1.69E-46 |
| MS.gene054344 | MS.gene63408 | 0.844816 | 5.98E-59 | -1.69E-46 |
| MS.gene054408 | MS.gene63408 | 0.836932 | 7.00E-57 | -1.69E-46 |
| MS.gene054595 | MS.gene63408 | 0.826663 | 2.40E-54 | -1.69E-46 |
| MS.gene054600 | MS.gene63408 | 0.847237 | 1.31E-59 | -1.69E-46 |
| MS.gene054642 | MS.gene63408 | 0.850091 | 2.12E-60 | -1.69E-46 |
| MS.gene054706 | MS.gene63408 | -0.85758 | 1.48E-62 | -1.69E-46 |
| MS.gene05470 | MS.gene63408 | 0.873902 | 1.03E-67 | -1.69E-46 |
| MS.gene054884 | MS.gene63408 | -0.812588 | 3.93E-51 | -1.69E-46 |
| MS.gene054927 | MS.gene63408 | 0.822828 | 1.92E-53 | -1.69E-46 |
| MS.gene05494 | MS.gene63408 | 0.871237 | 7.97E-67 | -1.69E-46 |
| MS.gene054954 | MS.gene63408 | 0.867934 | 9.49E-66 | -1.69E-46 |
| MS.gene05505 | MS.gene63408 | 0.84979 | 2.58E-60 | -1.69E-46 |
| MS.gene055206 | MS.gene63408 | 0.859854 | 3.10E-63 | -1.69E-46 |
| MS.gene055212 | MS.gene63408 | 0.809446 | 1.89E-50 | -1.69E-46 |
| MS.gene055224 | MS.gene63408 | 0.848942 | 4.44E-60 | -1.69E-46 |
| MS.gene055289 | MS.gene63408 | 0.825032 | 5.85E-54 | -1.69E-46 |
| MS.gene055362 | MS.gene63408 | 0.859729 | 3.38E-63 | -1.69E-46 |
| MS.gene055502 | MS.gene63408 | 0.880152 | 6.94E-70 | -1.69E-46 |
| MS.gene055577 | MS.gene63408 | 0.885308 | 9.10E-72 | -1.69E-46 |
| MS.gene055722 | MS.gene63408 | 0.833573 | 4.94E-56 | -1.69E-46 |
| MS.gene055748 | MS.gene63408 | 0.878835 | 2.04E-69 | -1.69E-46 |
| MS.gene055750 | MS.gene63408 | 0.874928 | 4.60E-68 | -1.69E-46 |
| MS.gene055751 | MS.gene63408 | 0.882117 | 1.36E-70 | -1.69E-46 |
| MS.gene055776 | MS.gene63408 | 0.81615 | 6.41E-52 | -1.69E-46 |
| MS.gene05589 | MS.gene63408 | 0.893392 | 6.56E-75 | -1.69E-46 |
| MS.gene055941 | MS.gene63408 | 0.857711 | 1.35E-62 | -1.69E-46 |
| MS.gene056046 | MS.gene63408 | 0.830419 | 2.97E-55 | -1.69E-46 |
| MS.gene056198 | MS.gene63408 | -0.802505 | 5.43E-49 | -1.69E-46 |
| MS.gene056283 | MS.gene63408 | 0.805723 | 1.16E-49 | -1.69E-46 |
| MS.gene056387 | MS.gene63408 | 0.878451 | 2.78E-69 | -1.69E-46 |
| MS.gene056409 | MS.gene63408 | 0.814708 | 1.34E-51 | -1.69E-46 |
| MS.gene056449 | MS.gene63408 | 0.844611 | 6.79E-59 | -1.69E-46 |
| MS.gene056487 | MS.gene63408 | 0.827542 | 1.48E-54 | -1.69E-46 |
| MS.gene056504 | MS.gene63408 | 0.886626 | 2.90E-72 | -1.69E-46 |
| MS.gene056510 | MS.gene63408 | 0.850889 | 1.27E-60 | -1.69E-46 |
| MS.gene056610 | MS.gene63408 | 0.806936 | 6.46E-50 | -1.69E-46 |
| MS.gene056618 | MS.gene63408 | -0.817451 | 3.28E-52 | -1.69E-46 |
| MS.gene056657 | MS.gene63408 | 0.86075 | 1.66E-63 | -1.69E-46 |
| MS.gene056692 | MS.gene63408 | 0.846218 | 2.49E-59 | -1.69E-46 |
| MS.gene056697 | MS.gene63408 | -0.818857 | 1.57E-52 | -1.69E-46 |
| MS.gene056898 | MS.gene63408 | 0.807742 | 4.36E-50 | -1.69E-46 |
| MS.gene056903 | MS.gene63408 | 0.804802 | 1.81E-49 | -1.69E-46 |
| MS.gene056946 | MS.gene63408 | 0.812514 | 4.08E-51 | -1.69E-46 |
| MS.gene057048 | MS.gene63408 | 0.839989 | 1.14E-57 | -1.69E-46 |
| MS.gene057076 | MS.gene63408 | 0.866389 | 2.95E-65 | -1.69E-46 |
| MS.gene057416 | MS.gene63408 | 0.820457 | 6.79E-53 | -1.69E-46 |
| MS.gene057658 | MS.gene63408 | 0.881009 | 3.43E-70 | -1.69E-46 |
| MS.gene057734 | MS.gene63408 | 0.815031 | 1.14E-51 | -1.69E-46 |
| MS.gene057831 | MS.gene63408 | 0.839642 | 1.40E-57 | -1.69E-46 |
| MS.gene057856 | MS.gene63408 | 0.820621 | 6.23E-53 | -1.69E-46 |
| MS.gene057857 | MS.gene63408 | 0.853 | 3.19E-61 | -1.69E-46 |
| MS.gene05787 | MS.gene63408 | 0.818039 | 2.41E-52 | -1.69E-46 |
| MS.gene057926 | MS.gene63408 | 0.822244 | 2.63E-53 | -1.69E-46 |
| MS.gene058130 | MS.gene63408 | 0.818823 | 1.60E-52 | -1.69E-46 |
| MS.gene058157 | MS.gene63408 | 0.825764 | 3.92E-54 | -1.69E-46 |
| MS.gene058334 | MS.gene63408 | -0.811972 | 5.36E-51 | -1.69E-46 |
| MS.gene058338 | MS.gene63408 | 0.874377 | 7.08E-68 | -1.69E-46 |
| MS.gene058376 | MS.gene63408 | 0.803166 | 3.97E-49 | -1.69E-46 |
| MS.gene05837 | MS.gene63408 | 0.853986 | 1.66E-61 | -1.69E-46 |
| MS.gene058382 | MS.gene63408 | -0.81102 | 8.63E-51 | -1.69E-46 |
| MS.gene058419 | MS.gene63408 | 0.875301 | 3.43E-68 | -1.69E-46 |
| MS.gene058444 | MS.gene63408 | 0.811794 | 5.86E-51 | -1.69E-46 |
| MS.gene058544 | MS.gene63408 | 0.848663 | 5.31E-60 | -1.69E-46 |
| MS.gene058603 | MS.gene63408 | -0.806021 | 1.01E-49 | -1.69E-46 |
| MS.gene058723 | MS.gene63408 | 0.865493 | 5.68E-65 | -1.69E-46 |
| MS.gene058773 | MS.gene63408 | 0.856954 | 2.27E-62 | -1.69E-46 |
| MS.gene058838 | MS.gene63408 | 0.892641 | 1.32E-74 | -1.69E-46 |
| MS.gene059022 | MS.gene63408 | 0.856285 | 3.57E-62 | -1.69E-46 |
| MS.gene059023 | MS.gene63408 | 0.919785 | 2.92E-87 | -1.69E-46 |
| MS.gene05912 | MS.gene63408 | 0.827103 | 1.88E-54 | -1.69E-46 |
| MS.gene05913 | MS.gene63408 | 0.869379 | 3.24E-66 | -1.69E-46 |
| MS.gene05914 | MS.gene63408 | 0.849322 | 3.48E-60 | -1.69E-46 |
| MS.gene05926 | MS.gene63408 | -0.812463 | 4.19E-51 | -1.69E-46 |
| MS.gene05934 | MS.gene63408 | 0.858341 | 8.80E-63 | -1.69E-46 |
| MS.gene059667 | MS.gene63408 | 0.861339 | 1.10E-63 | -1.69E-46 |
| MS.gene059677 | MS.gene63408 | 0.884007 | 2.77E-71 | -1.69E-46 |
| MS.gene059699 | MS.gene63408 | -0.808534 | 2.95E-50 | -1.69E-46 |
| MS.gene059703 | MS.gene63408 | -0.812809 | 3.52E-51 | -1.69E-46 |
| MS.gene059718 | MS.gene63408 | 0.874611 | 5.90E-68 | -1.69E-46 |
| MS.gene059756 | MS.gene63408 | 0.863509 | 2.37E-64 | -1.69E-46 |
| MS.gene059801 | MS.gene63408 | 0.842774 | 2.11E-58 | -1.69E-46 |
| MS.gene059865 | MS.gene63408 | 0.851734 | 7.32E-61 | -1.69E-46 |
| MS.gene059902 | MS.gene63408 | 0.840203 | 1.00E-57 | -1.69E-46 |
| MS.gene06000 | MS.gene63408 | 0.85529 | 6.97E-62 | -1.69E-46 |
| MS.gene06027 | MS.gene63408 | 0.807223 | 5.61E-50 | -1.69E-46 |
| MS.gene060405 | MS.gene63408 | -0.817109 | 3.91E-52 | -1.69E-46 |
| MS.gene060703 | MS.gene63408 | 0.846517 | 2.07E-59 | -1.69E-46 |
| MS.gene060762 | MS.gene63408 | 0.892338 | 1.74E-74 | -1.69E-46 |
| MS.gene060778 | MS.gene63408 | 0.853974 | 1.68E-61 | -1.69E-46 |
| MS.gene06077 | MS.gene63408 | 0.86147 | 1.00E-63 | -1.69E-46 |
| MS.gene060835 | MS.gene63408 | 0.829179 | 5.95E-55 | -1.69E-46 |
| MS.gene06092 | MS.gene63408 | 0.840337 | 9.24E-58 | -1.69E-46 |
| MS.gene06097 | MS.gene63408 | 0.826197 | 3.10E-54 | -1.69E-46 |
| MS.gene060982 | MS.gene63408 | 0.866206 | 3.38E-65 | -1.69E-46 |
| MS.gene061041 | MS.gene63408 | 0.823678 | 1.22E-53 | -1.69E-46 |
| MS.gene061150 | MS.gene63408 | 0.859927 | 2.95E-63 | -1.69E-46 |
| MS.gene061231 | MS.gene63408 | 0.802372 | 5.79E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63408.t1 | MTR_8g465870 | 97.927 | 579 | 12 | 0 | 1 | 579 | 1 | 579 | 0.0 | 1162 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63408.t1 | AT2G32640 | 70.085 | 585 | 169 | 1 | 1 | 579 | 1 | 585 | 0.0 | 818 |
| MS.gene63408.t1 | AT2G32640 | 64.660 | 382 | 129 | 1 | 1 | 376 | 1 | 382 | 3.31e-166 | 478 |
Find 131 sgRNAs with CRISPR-Local
Find 345 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCAACAATTCTTCCAATTT+TGG | 0.110399 | 4.4:-60060702 | None:intergenic |
| CCTGTATCATTTGGTGGTTT+TGG | 0.172274 | 4.4:+60061743 | MS.gene63408:CDS |
| TTTCAGGTTCTGAAACTTTC+CGG | 0.224553 | 4.4:+60059652 | MS.gene63408:intron |
| GAGATACTGAGAGTTATTTA+TGG | 0.228860 | 4.4:+60061140 | MS.gene63408:CDS |
| GTAGCTTAGTACCTGGGTTT+TGG | 0.242734 | 4.4:-60057855 | None:intergenic |
| TGCAGGATGTTGTACAGTTT+GGG | 0.262343 | 4.4:+60062569 | MS.gene63408:intron |
| TTGCAGGATGTTGTACAGTT+TGG | 0.272522 | 4.4:+60062568 | MS.gene63408:intron |
| TCAACCAGGATCGCCAAAAT+TGG | 0.275734 | 4.4:+60060689 | MS.gene63408:CDS |
| CATATCAAGAAAGGAGCTTT+TGG | 0.278505 | 4.4:+60058640 | MS.gene63408:CDS |
| TTGAAAGCAAAGGAGATATC+TGG | 0.284111 | 4.4:+60058937 | MS.gene63408:CDS |
| TCTGGACCAATCAAGTAGTA+TGG | 0.291303 | 4.4:-60063104 | None:intergenic |
| ATGAATCACCTGTTTGAATA+TGG | 0.302700 | 4.4:-60062647 | None:intergenic |
| GAAATGGATACCTGATATTC+TGG | 0.304541 | 4.4:-60060744 | None:intergenic |
| CATCTTGAGGCATGGAAATA+TGG | 0.308537 | 4.4:+60063371 | MS.gene63408:CDS |
| AAGAATTGTTGGAAGAATAC+TGG | 0.333269 | 4.4:+60060712 | MS.gene63408:CDS |
| GAATCTGATGCCAGAATATC+AGG | 0.351292 | 4.4:+60060734 | MS.gene63408:CDS |
| ACTTGTAGAAGTTGGAATCT+TGG | 0.358738 | 4.4:+60058664 | MS.gene63408:CDS |
| GCTGAATATGACATCACTAT+TGG | 0.363591 | 4.4:-60060477 | None:intergenic |
| TTCAGGTTCTGAAACTTTCC+GGG | 0.368912 | 4.4:+60059653 | MS.gene63408:intron |
| GCCAAAATTGGAAGAATTGT+TGG | 0.372380 | 4.4:+60060701 | MS.gene63408:CDS |
| GATGGTGTTTGCCTTGTTGT+TGG | 0.380370 | 4.4:+60060425 | MS.gene63408:CDS |
| GTATTCCCATACTACTTGAT+TGG | 0.381269 | 4.4:+60063098 | MS.gene63408:CDS |
| GGAGCTTGACCAGGCATCTT+GGG | 0.387112 | 4.4:+60061765 | MS.gene63408:CDS |
| AAGCTGTGATATTCCATTGA+TGG | 0.389700 | 4.4:-60057774 | None:intergenic |
| ACAATCTCTATAAGCCTAAC+AGG | 0.394378 | 4.4:-60059266 | None:intergenic |
| TCTGCCGCTGCAGGCCTGTT+AGG | 0.395883 | 4.4:+60059252 | MS.gene63408:intron |
| ATTCAATCACCTGTATCATT+TGG | 0.400994 | 4.4:+60061734 | MS.gene63408:CDS |
| AATGTAGCAGAAAAGCATTC+AGG | 0.403942 | 4.4:+60057810 | MS.gene63408:CDS |
| TGCAGAAATGGTCGTAGAAC+TGG | 0.404877 | 4.4:-60062423 | None:intergenic |
| GATCTTGCTGATAAAATAGA+AGG | 0.406678 | 4.4:+60058402 | MS.gene63408:CDS |
| AGTTCATTGATAAAATCTTC+AGG | 0.414452 | 4.4:-60062235 | None:intergenic |
| ATCATTAGAGAGAACAAGAA+TGG | 0.417870 | 4.4:+60058615 | MS.gene63408:intron |
| AGATATCCCACCTGCAGAAA+TGG | 0.422625 | 4.4:-60062435 | None:intergenic |
| TAGCAGAAAAGTACCATGTA+TGG | 0.430522 | 4.4:-60062079 | None:intergenic |
| GGGAGCTTGACCAGGCATCT+TGG | 0.430972 | 4.4:+60061764 | MS.gene63408:CDS |
| CTTCAGCTTCAACCCATCAA+TGG | 0.436766 | 4.4:+60057761 | MS.gene63408:CDS |
| AGTGGTGAAGTTGGTGGAGC+TGG | 0.437575 | 4.4:+60057991 | MS.gene63408:CDS |
| ATTGTACATTTGCAGAGGCT+TGG | 0.440783 | 4.4:+60062396 | MS.gene63408:intron |
| GCCAAGCATCAGAAAATGTC+TGG | 0.448408 | 4.4:-60063122 | None:intergenic |
| TTGCCACCGCCTTGTGCGCA+AGG | 0.453601 | 4.4:+60058469 | MS.gene63408:CDS |
| AGCCCAACTTGAGTGCTTCA+TGG | 0.456121 | 4.4:+60062170 | MS.gene63408:intron |
| TGCCAACTTTAGTTGTATGC+AGG | 0.461509 | 4.4:+60062264 | MS.gene63408:CDS |
| CAGGCATTTCCAGCAGGATC+AGG | 0.462465 | 4.4:+60060624 | MS.gene63408:intron |
| CAATCACCTGTATCATTTGG+TGG | 0.467842 | 4.4:+60061737 | MS.gene63408:CDS |
| ACTCCCATCCATATTCAAAC+AGG | 0.471427 | 4.4:+60062639 | MS.gene63408:CDS |
| ACCCCTTGCGCACAAGGCGG+TGG | 0.472573 | 4.4:-60058472 | None:intergenic |
| AATATGGATGGGAGTATTTG+AGG | 0.477513 | 4.4:-60062631 | None:intergenic |
| AACAAATGTTTGACCATAGC+TGG | 0.479762 | 4.4:-60058050 | None:intergenic |
| CACTGGAAACTCGTCTTCGA+TGG | 0.484794 | 4.4:-60063341 | None:intergenic |
| AACCATGAAGCACTCAAGTT+GGG | 0.486370 | 4.4:-60062172 | None:intergenic |
| TACTAAAAGCAGCTGGTAGC+GGG | 0.489118 | 4.4:-60061595 | None:intergenic |
| ACAACAAGGCAAACACCATC+AGG | 0.489528 | 4.4:-60060422 | None:intergenic |
| ATCAGCAAAGGTCGCGAGAA+AGG | 0.491370 | 4.4:-60063152 | None:intergenic |
| TCGTCTTATAATTGATGCCA+TGG | 0.497926 | 4.4:+60059693 | MS.gene63408:CDS |
| TGAAAAGATTAGACCAGCTA+TGG | 0.501163 | 4.4:+60058037 | MS.gene63408:CDS |
| TCGAAGACCCCTTGCGCACA+AGG | 0.504246 | 4.4:-60058478 | None:intergenic |
| TTAGTACCTCTCACGATATG+TGG | 0.506371 | 4.4:-60061171 | None:intergenic |
| CCAAAACCACCAAATGATAC+AGG | 0.510561 | 4.4:-60061743 | None:intergenic |
| GTCAATGACATTCTTAATCT+CGG | 0.511958 | 4.4:+60058960 | MS.gene63408:CDS |
| CACCTGCATACAACTAAAGT+TGG | 0.512661 | 4.4:-60062266 | None:intergenic |
| CGTCTTATAATTGATGCCAT+GGG | 0.512682 | 4.4:+60059694 | MS.gene63408:CDS |
| TGCCACCGCCTTGTGCGCAA+GGG | 0.514704 | 4.4:+60058470 | MS.gene63408:CDS |
| TTAGTGTGTGGAGGAACTCT+TGG | 0.516722 | 4.4:+60058438 | MS.gene63408:CDS |
| AACATTTGTTCACCTCAAGA+AGG | 0.517427 | 4.4:+60058063 | MS.gene63408:CDS |
| TCTTCACAGGCATTTCCAGC+AGG | 0.518830 | 4.4:+60060618 | MS.gene63408:intron |
| CTACTAAAAGCAGCTGGTAG+CGG | 0.522440 | 4.4:-60061596 | None:intergenic |
| TGACAGTCTCCCAAGATGCC+TGG | 0.524652 | 4.4:-60061774 | None:intergenic |
| GTTTCTCTGAGTGGTGAAGT+TGG | 0.527029 | 4.4:+60057982 | MS.gene63408:CDS |
| AGAATGGAACATATCAAGAA+AGG | 0.528105 | 4.4:+60058631 | MS.gene63408:CDS |
| GGGTCTTCGAGTGGCAATTG+TGG | 0.536464 | 4.4:+60058491 | MS.gene63408:CDS |
| TGAAAGCAAAGGAGATATCT+GGG | 0.539774 | 4.4:+60058938 | MS.gene63408:CDS |
| GTTGTTGGAACCTGCGCGCG+TGG | 0.543125 | 4.4:+60060440 | MS.gene63408:CDS |
| CTGGACCAATCAAGTAGTAT+GGG | 0.543846 | 4.4:-60063103 | None:intergenic |
| TCAGATGAGGTAAACAAGCT+TGG | 0.546384 | 4.4:-60058381 | None:intergenic |
| ATCACCTGTTTGAATATGGA+TGG | 0.547178 | 4.4:-60062643 | None:intergenic |
| TGGAAAGGAATGTGTTGAAA+GGG | 0.548107 | 4.4:+60058511 | MS.gene63408:CDS |
| GGGGCACTTTCAAAGACACT+TGG | 0.549172 | 4.4:+60062589 | MS.gene63408:CDS |
| TCAAGAGGACCTGATCCTGC+TGG | 0.553182 | 4.4:-60060633 | None:intergenic |
| CAACCATGAAGCACTCAAGT+TGG | 0.554985 | 4.4:-60062173 | None:intergenic |
| GCCACCGCCTTGTGCGCAAG+GGG | 0.558260 | 4.4:+60058471 | MS.gene63408:CDS |
| AGCTGTGATATTCCATTGAT+GGG | 0.561011 | 4.4:-60057773 | None:intergenic |
| AGCTCAACAGTAAAGAGAGT+TGG | 0.561238 | 4.4:+60060500 | MS.gene63408:CDS |
| TACAGGTGATTGAATACCGC+TGG | 0.562675 | 4.4:-60061726 | None:intergenic |
| GATAAAATCTTCAGGAACAT+CGG | 0.564277 | 4.4:-60062227 | None:intergenic |
| AGTTCTACGACCATTTCTGC+AGG | 0.567554 | 4.4:+60062425 | MS.gene63408:CDS |
| TCTCTGAGTGGTGAAGTTGG+TGG | 0.567649 | 4.4:+60057985 | MS.gene63408:CDS |
| GTCTCTTCTGAATCCATACA+TGG | 0.572113 | 4.4:+60062066 | MS.gene63408:CDS |
| AGATGTGGATTTGAAAGCAA+AGG | 0.575048 | 4.4:+60058927 | MS.gene63408:CDS |
| ATCCTCGTATACATTTATGA+AGG | 0.576536 | 4.4:-60059342 | None:intergenic |
| AAAACTCTACTAAAAGCAGC+TGG | 0.581308 | 4.4:-60061602 | None:intergenic |
| GTGCGCAAGGGGTCTTCGAG+TGG | 0.583800 | 4.4:+60058482 | MS.gene63408:CDS |
| GAGGCATGGAAATATGGAGC+TGG | 0.585306 | 4.4:+60063377 | MS.gene63408:CDS |
| GCAGGATGTTGTACAGTTTG+GGG | 0.585389 | 4.4:+60062570 | MS.gene63408:intron |
| GGAAAAGACATCTTGAGGCA+TGG | 0.590434 | 4.4:+60063363 | MS.gene63408:CDS |
| AAAGACTATTACCTCACAGC+AGG | 0.591568 | 4.4:-60063175 | None:intergenic |
| TTGTAGTTTGGTGATGCCAG+CGG | 0.595464 | 4.4:+60061710 | MS.gene63408:intron |
| TGTATGGATTCAGAAGAGAC+AGG | 0.596726 | 4.4:-60062063 | None:intergenic |
| AAGTGAACATATAAGTAGTA+CGG | 0.605890 | 4.4:-60060656 | None:intergenic |
| GCGCGCAGGTTCCAACAACA+AGG | 0.607237 | 4.4:-60060436 | None:intergenic |
| TGAACAATGCAGAATAGATG+TGG | 0.608301 | 4.4:+60058912 | MS.gene63408:intron |
| TTCGAGTGGCAATTGTGGAA+AGG | 0.609373 | 4.4:+60058496 | MS.gene63408:CDS |
| CATCTTGGGAGACTGTCAGC+TGG | 0.612404 | 4.4:+60061779 | MS.gene63408:CDS |
| GAATGACACAAACCTTCTTG+AGG | 0.612660 | 4.4:-60058075 | None:intergenic |
| GTGGAAAGGAATGTGTTGAA+AGG | 0.615227 | 4.4:+60058510 | MS.gene63408:CDS |
| TTTATCAGCAAGATCAGATG+AGG | 0.618931 | 4.4:-60058394 | None:intergenic |
| TAGTACCTCTCACGATATGT+GGG | 0.624088 | 4.4:-60061170 | None:intergenic |
| CTCCTTCATAAATGTATACG+AGG | 0.628193 | 4.4:+60059340 | MS.gene63408:CDS |
| CCAGTGGAAAAGACATCTTG+AGG | 0.630050 | 4.4:+60063358 | MS.gene63408:CDS |
| GGTGAAGTTGGTGGAGCTGG+AGG | 0.630599 | 4.4:+60057994 | MS.gene63408:CDS |
| ATATAAGTAGTACGGTCAAG+AGG | 0.635127 | 4.4:-60060648 | None:intergenic |
| TTGGCCTCGTTATGTTAACA+CGG | 0.636038 | 4.4:+60062608 | MS.gene63408:CDS |
| CATCGAAGACGAGTTTCCAG+TGG | 0.637297 | 4.4:+60063342 | MS.gene63408:CDS |
| TCGTATGATGTGTTAGTGTG+TGG | 0.645166 | 4.4:+60058426 | MS.gene63408:CDS |
| GGAATACACGAAGCAATCGA+TGG | 0.645915 | 4.4:+60062019 | MS.gene63408:intron |
| ACTTATGTAGAACCTCAACC+AGG | 0.651187 | 4.4:+60060675 | MS.gene63408:CDS |
| AGCTGTTCCCTCCAAAACCC+AGG | 0.652617 | 4.4:+60057844 | MS.gene63408:CDS |
| AGTATCTCTAGATTGTCAAG+TGG | 0.655036 | 4.4:-60061125 | None:intergenic |
| AGACGTGGGAGGAAGCCTGA+TGG | 0.659537 | 4.4:+60060407 | MS.gene63408:CDS |
| ATTGTAGAGACAATTTGTTG+AGG | 0.660221 | 4.4:-60058357 | None:intergenic |
| AACAGGGGAAAAGTTCCCCA+TGG | 0.664926 | 4.4:-60059710 | None:intergenic |
| TCACCTGTTTGAATATGGAT+GGG | 0.672063 | 4.4:-60062642 | None:intergenic |
| TCTTTCCCACATATCGTGAG+AGG | 0.672231 | 4.4:+60061165 | MS.gene63408:CDS |
| CCTCACAGCAGGATCAGCAA+AGG | 0.675966 | 4.4:-60063164 | None:intergenic |
| TCAGGTTCTGAAACTTTCCG+GGG | 0.684505 | 4.4:+60059654 | MS.gene63408:intron |
| TATGATGTGTTAGTGTGTGG+AGG | 0.687161 | 4.4:+60058429 | MS.gene63408:CDS |
| ATGGAGAGTGTTTCTCTGAG+TGG | 0.689379 | 4.4:+60057973 | MS.gene63408:CDS |
| GTCTTATAATTGATGCCATG+GGG | 0.696240 | 4.4:+60059695 | MS.gene63408:CDS |
| GGAAAGGAATGTGTTGAAAG+GGG | 0.701449 | 4.4:+60058512 | MS.gene63408:CDS |
| CCTTTGCTGATCCTGCTGTG+AGG | 0.715620 | 4.4:+60063164 | MS.gene63408:CDS |
| GAGGCCGTGTTAACATAACG+AGG | 0.722067 | 4.4:-60062612 | None:intergenic |
| AAGACCCCTTGCGCACAAGG+CGG | 0.736194 | 4.4:-60058475 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTCAATACTTAAATTATT+GGG | - | chr4.4:60059183-60059202 | None:intergenic | 10.0% |
| !!! | AACAACAAAATAAAATTTTA+TGG | - | chr4.4:60060933-60060952 | None:intergenic | 10.0% |
| !!! | AGTTTTTTTTTTTTAGTTTA+TGG | + | chr4.4:60061880-60061899 | MS.gene63408:intron | 10.0% |
| !!! | TATATATTGAATTAGTTTAT+GGG | - | chr4.4:60059004-60059023 | None:intergenic | 10.0% |
| !!! | TATATTGAATATTTTATCAT+AGG | - | chr4.4:60063016-60063035 | None:intergenic | 10.0% |
| !! | AAATAATTTCGAAATACAAA+AGG | - | chr4.4:60058866-60058885 | None:intergenic | 15.0% |
| !! | AAGAAATATTTATTTATTGC+AGG | + | chr4.4:60062552-60062571 | MS.gene63408:intron | 15.0% |
| !! | AAGATATGAAACAAATATTT+AGG | - | chr4.4:60061507-60061526 | None:intergenic | 15.0% |
| !! | ATAAATATTTGAAGAATGTA+AGG | - | chr4.4:60060983-60061002 | None:intergenic | 15.0% |
| !! | ATTCTGTAAAATTAAAATTG+AGG | - | chr4.4:60060588-60060607 | None:intergenic | 15.0% |
| !! | GAATATACAGAATAATAAAA+TGG | - | chr4.4:60063224-60063243 | None:intergenic | 15.0% |
| !! | GAATTCAATACTTAAATTAT+TGG | - | chr4.4:60059184-60059203 | None:intergenic | 15.0% |
| !! | GAGAAAAAAAAAATTACAAT+AGG | - | chr4.4:60059234-60059253 | None:intergenic | 15.0% |
| !! | GCAATAAATAAATATTTCTT+AGG | - | chr4.4:60062552-60062571 | None:intergenic | 15.0% |
| !! | TCATTAAATTAAATTGAAGA+AGG | - | chr4.4:60061998-60062017 | None:intergenic | 15.0% |
| !!! | ACTGAAAAATTCTAAAATTT+TGG | - | chr4.4:60062964-60062983 | None:intergenic | 15.0% |
| !!! | ATAATTTAAGTATTGAATTC+AGG | + | chr4.4:60059184-60059203 | MS.gene63408:intron | 15.0% |
| !!! | ATTTGCAATTTTTATATGAT+AGG | + | chr4.4:60061097-60061116 | MS.gene63408:intron | 15.0% |
| !!! | GTATATATTGAATTAGTTTA+TGG | - | chr4.4:60059005-60059024 | None:intergenic | 15.0% |
| !!! | TCTTCAATTTAATTTAATGA+AGG | + | chr4.4:60061998-60062017 | MS.gene63408:intron | 15.0% |
| !!! | TTACCATTTTTTTTATGATA+CGG | + | chr4.4:60061542-60061561 | MS.gene63408:intron | 15.0% |
| !!! | TTTGCAATTTTTATATGATA+GGG | + | chr4.4:60061098-60061117 | MS.gene63408:intron | 15.0% |
| !! | AAAAAAGTAATAGTCTAAAG+CGG | - | chr4.4:60062765-60062784 | None:intergenic | 20.0% |
| !! | AAAACCACTCAAAAATTAAT+TGG | - | chr4.4:60058584-60058603 | None:intergenic | 20.0% |
| !! | AACAACAAATTGAAAAGAAA+TGG | - | chr4.4:60060763-60060782 | None:intergenic | 20.0% |
| !! | AATAATAAAATGGTTCAGAA+AGG | - | chr4.4:60063214-60063233 | None:intergenic | 20.0% |
| !! | ATTAATCTTTCATTAAATGC+TGG | - | chr4.4:60060329-60060348 | None:intergenic | 20.0% |
| !! | CCAAATTAAAGAAATCATAA+AGG | - | chr4.4:60062480-60062499 | None:intergenic | 20.0% |
| !! | CCTTTATGATTTCTTTAATT+TGG | + | chr4.4:60062477-60062496 | MS.gene63408:intron | 20.0% |
| !! | CTAAATCTTCTATATTGAAA+AGG | - | chr4.4:60063056-60063075 | None:intergenic | 20.0% |
| !! | TAGATTATAACTGAAATAGA+AGG | - | chr4.4:60059054-60059073 | None:intergenic | 20.0% |
| !! | TGATATATGATAGAATACTA+TGG | + | chr4.4:60060156-60060175 | MS.gene63408:intron | 20.0% |
| !! | TTAATTCATTTGTAAGCATA+TGG | - | chr4.4:60061208-60061227 | None:intergenic | 20.0% |
| !! | TTGTTTAAATTGTTGTAAGA+CGG | + | chr4.4:60062790-60062809 | MS.gene63408:intron | 20.0% |
| !! | TTTCTTTCACATAAATCAAT+TGG | - | chr4.4:60059574-60059593 | None:intergenic | 20.0% |
| !!! | ATAATTTTCCAAAACCTTTT+TGG | - | chr4.4:60061906-60061925 | None:intergenic | 20.0% |
| !!! | ATTCAAAAGCACAATATTTT+TGG | + | chr4.4:60060525-60060544 | MS.gene63408:CDS | 20.0% |
| !!! | TTCAAAAGCACAATATTTTT+GGG | + | chr4.4:60060526-60060545 | MS.gene63408:CDS | 20.0% |
| !!! | TTGTCTTTTGTTTTTATTAG+AGG | + | chr4.4:60057947-60057966 | MS.gene63408:intron | 20.0% |
| !!! | TTGTTTTTATTAGAGGATAA+TGG | + | chr4.4:60057954-60057973 | MS.gene63408:intron | 20.0% |
| !!! | TTGTTTTTCTTTGTATCTTA+TGG | + | chr4.4:60057920-60057939 | MS.gene63408:intron | 20.0% |
| ! | AAAAGACGAGGAAATATAAA+TGG | - | chr4.4:60059859-60059878 | None:intergenic | 25.0% |
| ! | AAACTATTAGAGAAACTACT+CGG | + | chr4.4:60060099-60060118 | MS.gene63408:intron | 25.0% |
| ! | AAATAGCATAAATCCTTAAG+AGG | - | chr4.4:60058835-60058854 | None:intergenic | 25.0% |
| ! | AAGTGAACATATAAGTAGTA+CGG | - | chr4.4:60060659-60060678 | None:intergenic | 25.0% |
| ! | ACCAATTTACCATACATATA+AGG | - | chr4.4:60058292-60058311 | None:intergenic | 25.0% |
| ! | ACCTTATATGTATGGTAAAT+TGG | + | chr4.4:60058288-60058307 | MS.gene63408:intron | 25.0% |
| ! | AGTTCATTGATAAAATCTTC+AGG | - | chr4.4:60062238-60062257 | None:intergenic | 25.0% |
| ! | ATCCAATTGTTTCATTCAAT+AGG | + | chr4.4:60061321-60061340 | MS.gene63408:intron | 25.0% |
| ! | CAATAATTCTAATACTTCAC+AGG | - | chr4.4:60059027-60059046 | None:intergenic | 25.0% |
| ! | CATAAAGGAAGATTAATGAA+AGG | - | chr4.4:60062465-60062484 | None:intergenic | 25.0% |
| ! | CTATTGTCAATTATCGTAAT+TGG | + | chr4.4:60059435-60059454 | MS.gene63408:intron | 25.0% |
| ! | TCATCATGTTATAGTTACAT+GGG | + | chr4.4:60059791-60059810 | MS.gene63408:intron | 25.0% |
| ! | TGATATAGAGATTAATGAGT+TGG | + | chr4.4:60060124-60060143 | MS.gene63408:intron | 25.0% |
| ! | TTCATCATGTTATAGTTACA+TGG | + | chr4.4:60059790-60059809 | MS.gene63408:intron | 25.0% |
| ! | TTCCTATTGAATGAAACAAT+TGG | - | chr4.4:60061326-60061345 | None:intergenic | 25.0% |
| ! | TTTCGCACAATGTTATTAAT+TGG | + | chr4.4:60062352-60062371 | MS.gene63408:intron | 25.0% |
| !! | AAAAAGTAATAGTCTAAAGC+GGG | - | chr4.4:60062764-60062783 | None:intergenic | 25.0% |
| !! | AATGTAAGGTACTAACTTTA+TGG | - | chr4.4:60060969-60060988 | None:intergenic | 25.0% |
| !! | AATTTTACTGAAATCTTCAC+AGG | + | chr4.4:60060605-60060624 | MS.gene63408:intron | 25.0% |
| !! | ACATGCATTATTTCATTTTC+AGG | + | chr4.4:60059636-60059655 | MS.gene63408:intron | 25.0% |
| !! | AGTATATTTGAAGTGTGTTT+AGG | - | chr4.4:60058787-60058806 | None:intergenic | 25.0% |
| !! | AGTTTCTCTAATAGTTTTCT+AGG | - | chr4.4:60060096-60060115 | None:intergenic | 25.0% |
| !! | GATGGAAGTGTATTTAAAAA+TGG | - | chr4.4:60063326-60063345 | None:intergenic | 25.0% |
| !! | TAATAGTCTTTTCATTTGCA+AGG | + | chr4.4:60063187-60063206 | MS.gene63408:intron | 25.0% |
| !! | TAGACAAAAATATTGGTGAT+TGG | - | chr4.4:60062146-60062165 | None:intergenic | 25.0% |
| !! | TATTGAATTAGTTTATGGGA+AGG | - | chr4.4:60059000-60059019 | None:intergenic | 25.0% |
| !!! | CTTTTCTGCTAATTTTTAGA+AGG | + | chr4.4:60062091-60062110 | MS.gene63408:intron | 25.0% |
| !!! | GGTTCACTTGTTTTTAAAAT+CGG | + | chr4.4:60061833-60061852 | MS.gene63408:intron | 25.0% |
| !!! | TTTTTAGTTTATGGCCAAAA+AGG | + | chr4.4:60061889-60061908 | MS.gene63408:intron | 25.0% |
| AAACCTATTCCTATATTGCA+TGG | - | chr4.4:60059836-60059855 | None:intergenic | 30.0% | |
| AAGAATTGTTGGAAGAATAC+TGG | + | chr4.4:60060712-60060731 | MS.gene63408:CDS | 30.0% | |
| ACACATATTAGTAGTTGAAG+AGG | - | chr4.4:60057883-60057902 | None:intergenic | 30.0% | |
| AGAATGGAACATATCAAGAA+AGG | + | chr4.4:60058631-60058650 | MS.gene63408:CDS | 30.0% | |
| ATAGAATATGACACTGAAAG+AGG | - | chr4.4:60060374-60060393 | None:intergenic | 30.0% | |
| ATCAATGCAGTATAGAAAAC+TGG | - | chr4.4:60060898-60060917 | None:intergenic | 30.0% | |
| ATCATTAGAGAGAACAAGAA+TGG | + | chr4.4:60058615-60058634 | MS.gene63408:intron | 30.0% | |
| ATCCTCGTATACATTTATGA+AGG | - | chr4.4:60059345-60059364 | None:intergenic | 30.0% | |
| ATCCTTAAGAGGTAAGAAAA+TGG | - | chr4.4:60058824-60058843 | None:intergenic | 30.0% | |
| ATGAATCACCTGTTTGAATA+TGG | - | chr4.4:60062650-60062669 | None:intergenic | 30.0% | |
| ATGAGACAACCTTATATGTA+TGG | + | chr4.4:60058280-60058299 | MS.gene63408:intron | 30.0% | |
| ATTCAATCACCTGTATCATT+TGG | + | chr4.4:60061734-60061753 | MS.gene63408:CDS | 30.0% | |
| CAAATGTACAATCAGTATTG+AGG | - | chr4.4:60062388-60062407 | None:intergenic | 30.0% | |
| CTCATAAAGAAAAAAAGACG+AGG | - | chr4.4:60059871-60059890 | None:intergenic | 30.0% | |
| CTTTCTATCTATTCTCAGTA+TGG | + | chr4.4:60061402-60061421 | MS.gene63408:intron | 30.0% | |
| GAGATACTGAGAGTTATTTA+TGG | + | chr4.4:60061140-60061159 | MS.gene63408:CDS | 30.0% | |
| GATAAAATCTTCAGGAACAT+CGG | - | chr4.4:60062230-60062249 | None:intergenic | 30.0% | |
| GATCTTGCTGATAAAATAGA+AGG | + | chr4.4:60058402-60058421 | MS.gene63408:CDS | 30.0% | |
| GCTGCATTAGACAAAAATAT+TGG | - | chr4.4:60062153-60062172 | None:intergenic | 30.0% | |
| GTCAATGACATTCTTAATCT+CGG | + | chr4.4:60058960-60058979 | MS.gene63408:CDS | 30.0% | |
| GTGCCGTATCATAAAAAAAA+TGG | - | chr4.4:60061548-60061567 | None:intergenic | 30.0% | |
| TAGAATATGACACTGAAAGA+GGG | - | chr4.4:60060373-60060392 | None:intergenic | 30.0% | |
| TATTTCTTAGGACTGTCATT+AGG | - | chr4.4:60062540-60062559 | None:intergenic | 30.0% | |
| TCAACATATAAGTAGCGTAA+TGG | - | chr4.4:60060835-60060854 | None:intergenic | 30.0% | |
| TCAATGACTTAGTTTCACAA+AGG | - | chr4.4:60061657-60061676 | None:intergenic | 30.0% | |
| TGCATTAGTTCAGTTATTAC+AGG | - | chr4.4:60058731-60058750 | None:intergenic | 30.0% | |
| ! | AAAAATGGCCTTGCAATTAA+TGG | - | chr4.4:60063311-60063330 | None:intergenic | 30.0% |
| ! | AAGGTACTAACTTTATGGAT+TGG | - | chr4.4:60060964-60060983 | None:intergenic | 30.0% |
| ! | AAGTTCTTGTTTCTCGTTAT+TGG | + | chr4.4:60061292-60061311 | MS.gene63408:intron | 30.0% |
| ! | ACACCTTCAATTTGAAATGT+CGG | + | chr4.4:60058248-60058267 | MS.gene63408:intron | 30.0% |
| ! | ATGATTTTACAGATAAGACG+TGG | + | chr4.4:60060392-60060411 | MS.gene63408:intron | 30.0% |
| ! | ATTTTATCATAGGAGCTAAG+AGG | - | chr4.4:60063006-60063025 | None:intergenic | 30.0% |
| ! | TCCAACAATTCTTCCAATTT+TGG | - | chr4.4:60060705-60060724 | None:intergenic | 30.0% |
| ! | TGATTTTACAGATAAGACGT+GGG | + | chr4.4:60060393-60060412 | MS.gene63408:intron | 30.0% |
| ! | TTAGAAGTTGATCTTGTTTC+AGG | + | chr4.4:60063072-60063091 | MS.gene63408:intron | 30.0% |
| ! | TTTTATCATAGGAGCTAAGA+GGG | - | chr4.4:60063005-60063024 | None:intergenic | 30.0% |
| !! | ATTACTAGTTCTACAGGTTA+AGG | - | chr4.4:60059383-60059402 | None:intergenic | 30.0% |
| !! | ATTGTAGAGACAATTTGTTG+AGG | - | chr4.4:60058360-60058379 | None:intergenic | 30.0% |
| !! | CGATCCAATTAATTTTTGAG+TGG | + | chr4.4:60058577-60058596 | MS.gene63408:intron | 30.0% |
| !! | CTTAGTATCCAATTTTAACC+CGG | + | chr4.4:60062513-60062532 | MS.gene63408:intron | 30.0% |
| !! | TCACTTATTACTAGTTCTAC+AGG | - | chr4.4:60059389-60059408 | None:intergenic | 30.0% |
| !! | TCATTTTTGAATGTCTGTCT+GGG | + | chr4.4:60059110-60059129 | MS.gene63408:intron | 30.0% |
| !! | TTAGTATCCAATTTTAACCC+GGG | + | chr4.4:60062514-60062533 | MS.gene63408:intron | 30.0% |
| !! | TTCATTTTTGAATGTCTGTC+TGG | + | chr4.4:60059109-60059128 | MS.gene63408:intron | 30.0% |
| !!! | AAAAGCACAATATTTTTGGG+AGG | + | chr4.4:60060529-60060548 | MS.gene63408:CDS | 30.0% |
| !!! | GAAATTCTAGTTTGGTTTTG+AGG | - | chr4.4:60060786-60060805 | None:intergenic | 30.0% |
| !!! | TGACGCTTTATTTTGTAGTT+TGG | + | chr4.4:60061698-60061717 | MS.gene63408:intron | 30.0% |
| AAAACTCTACTAAAAGCAGC+TGG | - | chr4.4:60061605-60061624 | None:intergenic | 35.0% | |
| AACAAATGTTTGACCATAGC+TGG | - | chr4.4:60058053-60058072 | None:intergenic | 35.0% | |
| AACATTTGTTCACCTCAAGA+AGG | + | chr4.4:60058063-60058082 | MS.gene63408:CDS | 35.0% | |
| AAGAAAATGGCATGAAGCTA+TGG | - | chr4.4:60058811-60058830 | None:intergenic | 35.0% | |
| AAGCTGTGATATTCCATTGA+TGG | - | chr4.4:60057777-60057796 | None:intergenic | 35.0% | |
| AAGGATTGCATAAAGTTGCA+TGG | + | chr4.4:60059491-60059510 | MS.gene63408:intron | 35.0% | |
| ACAATCTCTATAAGCCTAAC+AGG | - | chr4.4:60059269-60059288 | None:intergenic | 35.0% | |
| ACACCGACATTTCAAATTGA+AGG | - | chr4.4:60058254-60058273 | None:intergenic | 35.0% | |
| ACTTAGTTTCACAAAGGTTC+AGG | - | chr4.4:60061651-60061670 | None:intergenic | 35.0% | |
| ACTTGTAGAAGTTGGAATCT+TGG | + | chr4.4:60058664-60058683 | MS.gene63408:CDS | 35.0% | |
| AGATGTGGATTTGAAAGCAA+AGG | + | chr4.4:60058927-60058946 | MS.gene63408:CDS | 35.0% | |
| AGCTGTGATATTCCATTGAT+GGG | - | chr4.4:60057776-60057795 | None:intergenic | 35.0% | |
| AGTATCTCTAGATTGTCAAG+TGG | - | chr4.4:60061128-60061147 | None:intergenic | 35.0% | |
| AGTCAAATCACTAGATGTAG+AGG | + | chr4.4:60060066-60060085 | MS.gene63408:intron | 35.0% | |
| ATATAAGTAGTACGGTCAAG+AGG | - | chr4.4:60060651-60060670 | None:intergenic | 35.0% | |
| ATCACCTGTTTGAATATGGA+TGG | - | chr4.4:60062646-60062665 | None:intergenic | 35.0% | |
| ATGCCATGCAATATAGGAAT+AGG | + | chr4.4:60059830-60059849 | MS.gene63408:intron | 35.0% | |
| ATTGCTTGCTCAACAAGAAA+AGG | - | chr4.4:60062869-60062888 | None:intergenic | 35.0% | |
| CGTCTTATAATTGATGCCAT+GGG | + | chr4.4:60059694-60059713 | MS.gene63408:CDS | 35.0% | |
| CGTTGTTCAAATGAATCTTG+TGG | + | chr4.4:60062938-60062957 | MS.gene63408:intron | 35.0% | |
| CTCCTTCATAAATGTATACG+AGG | + | chr4.4:60059340-60059359 | MS.gene63408:CDS | 35.0% | |
| CTTTGTCACAAACATCAGAT+AGG | + | chr4.4:60060273-60060292 | MS.gene63408:intron | 35.0% | |
| GAAATGGATACCTGATATTC+TGG | - | chr4.4:60060747-60060766 | None:intergenic | 35.0% | |
| GCCAAAATTGGAAGAATTGT+TGG | + | chr4.4:60060701-60060720 | MS.gene63408:CDS | 35.0% | |
| GCTGAATATGACATCACTAT+TGG | - | chr4.4:60060480-60060499 | None:intergenic | 35.0% | |
| GGAGAATTAAAGAACACATC+AGG | - | chr4.4:60061040-60061059 | None:intergenic | 35.0% | |
| GTATTCCCATACTACTTGAT+TGG | + | chr4.4:60063098-60063117 | MS.gene63408:CDS | 35.0% | |
| GTCTTATAATTGATGCCATG+GGG | + | chr4.4:60059695-60059714 | MS.gene63408:CDS | 35.0% | |
| TAAATGAGATCAGCTGCAAA+AGG | + | chr4.4:60059472-60059491 | MS.gene63408:intron | 35.0% | |
| TCACCTGTTTGAATATGGAT+GGG | - | chr4.4:60062645-60062664 | None:intergenic | 35.0% | |
| TCGTCTTATAATTGATGCCA+TGG | + | chr4.4:60059693-60059712 | MS.gene63408:CDS | 35.0% | |
| TGAAAAGATTAGACCAGCTA+TGG | + | chr4.4:60058037-60058056 | MS.gene63408:CDS | 35.0% | |
| TGAAAGCAAAGGAGATATCT+GGG | + | chr4.4:60058938-60058957 | MS.gene63408:CDS | 35.0% | |
| TGAACAATGCAGAATAGATG+TGG | + | chr4.4:60058912-60058931 | MS.gene63408:intron | 35.0% | |
| TGACATTGAAAAAGTCACAG+CGG | + | chr4.4:60058694-60058713 | MS.gene63408:CDS | 35.0% | |
| TGGAAAGGAATGTGTTGAAA+GGG | + | chr4.4:60058511-60058530 | MS.gene63408:CDS | 35.0% | |
| TGTTTCATGCCATGCAATAT+AGG | + | chr4.4:60059824-60059843 | MS.gene63408:intron | 35.0% | |
| TTGAAAGCAAAGGAGATATC+TGG | + | chr4.4:60058937-60058956 | MS.gene63408:CDS | 35.0% | |
| TTGAATGTAACCATATGTGC+TGG | + | chr4.4:60058210-60058229 | MS.gene63408:intron | 35.0% | |
| TTTATCAGCAAGATCAGATG+AGG | - | chr4.4:60058397-60058416 | None:intergenic | 35.0% | |
| TTTATCATAGGAGCTAAGAG+GGG | - | chr4.4:60063004-60063023 | None:intergenic | 35.0% | |
| ! | AAGAAACGTTTTATCTCCCT+CGG | + | chr4.4:60059290-60059309 | MS.gene63408:CDS | 35.0% |
| ! | AAGTTGATCTTGTTTCAGGT+TGG | + | chr4.4:60063076-60063095 | MS.gene63408:intron | 35.0% |
| ! | ATAGAAAACTGGTAGCGTAA+TGG | - | chr4.4:60060887-60060906 | None:intergenic | 35.0% |
| ! | CAATTTGAAATGTCGGTGTT+AGG | + | chr4.4:60058255-60058274 | MS.gene63408:intron | 35.0% |
| ! | CATATCAAGAAAGGAGCTTT+TGG | + | chr4.4:60058640-60058659 | MS.gene63408:CDS | 35.0% |
| ! | CTGTGGTTGAAATTCTAGTT+TGG | - | chr4.4:60060794-60060813 | None:intergenic | 35.0% |
| ! | GCATGATTTGTGACATTGAA+TGG | - | chr4.4:60061246-60061265 | None:intergenic | 35.0% |
| ! | GTTTATGGCCAAAAAGGTTT+TGG | + | chr4.4:60061895-60061914 | MS.gene63408:intron | 35.0% |
| ! | TACTGATTGTACATTTGCAG+AGG | + | chr4.4:60062391-60062410 | MS.gene63408:intron | 35.0% |
| ! | TGCTTTTAGTAGAGTTTTGC+AGG | + | chr4.4:60061607-60061626 | MS.gene63408:CDS | 35.0% |
| ! | TTTCAAATTGAAGGTGTGTC+TGG | - | chr4.4:60058245-60058264 | None:intergenic | 35.0% |
| !! | AATATGGATGGGAGTATTTG+AGG | - | chr4.4:60062634-60062653 | None:intergenic | 35.0% |
| !! | AATGTAGCAGAAAAGCATTC+AGG | + | chr4.4:60057810-60057829 | MS.gene63408:CDS | 35.0% |
| !! | CTGTATCATTTGGTGGTTTT+GGG | + | chr4.4:60061744-60061763 | MS.gene63408:CDS | 35.0% |
| !! | TAGCAGAAAAGTACCATGTA+TGG | - | chr4.4:60062082-60062101 | None:intergenic | 35.0% |
| !! | TTTCAGGTTCTGAAACTTTC+CGG | + | chr4.4:60059652-60059671 | MS.gene63408:intron | 35.0% |
| !!! | CTTTTGGAACTTGTAGAAGT+TGG | + | chr4.4:60058656-60058675 | MS.gene63408:CDS | 35.0% |
| !!! | TGCCATTTTCTTACCTCTTA+AGG | + | chr4.4:60058819-60058838 | MS.gene63408:intron | 35.0% |
| AAAACAGTAGATCACGTGGA+GGG | + | chr4.4:60060042-60060061 | MS.gene63408:intron | 40.0% | |
| AAAGACTATTACCTCACAGC+AGG | - | chr4.4:60063178-60063197 | None:intergenic | 40.0% | |
| AAGAAAAGGCCTTAAGGTCA+TGG | - | chr4.4:60062855-60062874 | None:intergenic | 40.0% | |
| ACTCCCATCCATATTCAAAC+AGG | + | chr4.4:60062639-60062658 | MS.gene63408:CDS | 40.0% | |
| ACTTATGTAGAACCTCAACC+AGG | + | chr4.4:60060675-60060694 | MS.gene63408:CDS | 40.0% | |
| AGAGAAAACAGTAGATCACG+TGG | + | chr4.4:60060038-60060057 | MS.gene63408:intron | 40.0% | |
| AGCTCAACAGTAAAGAGAGT+TGG | + | chr4.4:60060500-60060519 | MS.gene63408:CDS | 40.0% | |
| ATAGCAAGGCTAACATATGC+AGG | + | chr4.4:60060001-60060020 | MS.gene63408:intron | 40.0% | |
| ATCAGTCAACCATGACCTTA+AGG | + | chr4.4:60062843-60062862 | MS.gene63408:intron | 40.0% | |
| ATGGGACATCGCATATGATT+TGG | + | chr4.4:60060250-60060269 | MS.gene63408:intron | 40.0% | |
| ATTGTACATTTGCAGAGGCT+TGG | + | chr4.4:60062396-60062415 | MS.gene63408:intron | 40.0% | |
| CAACTTTAGTTGTATGCAGG+TGG | + | chr4.4:60062267-60062286 | MS.gene63408:intron | 40.0% | |
| CAATCACCTGTATCATTTGG+TGG | + | chr4.4:60061737-60061756 | MS.gene63408:CDS | 40.0% | |
| CACACGTTCCATTAATTGCA+AGG | + | chr4.4:60063300-60063319 | MS.gene63408:intron | 40.0% | |
| CACCTGCATACAACTAAAGT+TGG | - | chr4.4:60062269-60062288 | None:intergenic | 40.0% | |
| CATCTTGAGGCATGGAAATA+TGG | + | chr4.4:60063371-60063390 | MS.gene63408:CDS | 40.0% | |
| CCAAAACCACCAAATGATAC+AGG | - | chr4.4:60061746-60061765 | None:intergenic | 40.0% | |
| CCCTGTTGTAAAACAGGTTA+GGG | + | chr4.4:60059726-60059745 | MS.gene63408:intron | 40.0% | |
| CTCAACAAGAAAAGGCCTTA+AGG | - | chr4.4:60062861-60062880 | None:intergenic | 40.0% | |
| CTCTCCTATTATCCGGAATT+GGG | + | chr4.4:60059967-60059986 | MS.gene63408:intron | 40.0% | |
| CTGGACCAATCAAGTAGTAT+GGG | - | chr4.4:60063106-60063125 | None:intergenic | 40.0% | |
| GAATCTGATGCCAGAATATC+AGG | + | chr4.4:60060734-60060753 | MS.gene63408:CDS | 40.0% | |
| GAATGACACAAACCTTCTTG+AGG | - | chr4.4:60058078-60058097 | None:intergenic | 40.0% | |
| GCAAGATCTGAATCTTCAAC+AGG | - | chr4.4:60059212-60059231 | None:intergenic | 40.0% | |
| GGAAAGGAATGTGTTGAAAG+GGG | + | chr4.4:60058512-60058531 | MS.gene63408:CDS | 40.0% | |
| GGGAAGATGGTGAATACATT+TGG | - | chr4.4:60062744-60062763 | None:intergenic | 40.0% | |
| GTCTCTTCTGAATCCATACA+TGG | + | chr4.4:60062066-60062085 | MS.gene63408:CDS | 40.0% | |
| GTGGAAAGGAATGTGTTGAA+AGG | + | chr4.4:60058510-60058529 | MS.gene63408:CDS | 40.0% | |
| TAGCAAGGCTAACATATGCA+GGG | + | chr4.4:60060002-60060021 | MS.gene63408:intron | 40.0% | |
| TAGTACCTCTCACGATATGT+GGG | - | chr4.4:60061173-60061192 | None:intergenic | 40.0% | |
| TATGATGTGTTAGTGTGTGG+AGG | + | chr4.4:60058429-60058448 | MS.gene63408:CDS | 40.0% | |
| TCAGATGAGGTAAACAAGCT+TGG | - | chr4.4:60058384-60058403 | None:intergenic | 40.0% | |
| TCGTATGATGTGTTAGTGTG+TGG | + | chr4.4:60058426-60058445 | MS.gene63408:CDS | 40.0% | |
| TCTGGACCAATCAAGTAGTA+TGG | - | chr4.4:60063107-60063126 | None:intergenic | 40.0% | |
| TGCAGGATGTTGTACAGTTT+GGG | + | chr4.4:60062569-60062588 | MS.gene63408:intron | 40.0% | |
| TGCCAACTTTAGTTGTATGC+AGG | + | chr4.4:60062264-60062283 | MS.gene63408:CDS | 40.0% | |
| TGTATGGATTCAGAAGAGAC+AGG | - | chr4.4:60062066-60062085 | None:intergenic | 40.0% | |
| TTAGTACCTCTCACGATATG+TGG | - | chr4.4:60061174-60061193 | None:intergenic | 40.0% | |
| TTGCAGGATGTTGTACAGTT+TGG | + | chr4.4:60062568-60062587 | MS.gene63408:intron | 40.0% | |
| TTGGCCTCGTTATGTTAACA+CGG | + | chr4.4:60062608-60062627 | MS.gene63408:CDS | 40.0% | |
| ! | AACCATGAAGCACTCAAGTT+GGG | - | chr4.4:60062175-60062194 | None:intergenic | 40.0% |
| ! | AAGCCTTATCTCACTAAGTG+GGG | - | chr4.4:60060205-60060224 | None:intergenic | 40.0% |
| ! | AATAGTCTAAAGCGGGAAGA+TGG | - | chr4.4:60062757-60062776 | None:intergenic | 40.0% |
| ! | AGATGACAAGATTTTGTCCC+CGG | - | chr4.4:60059674-60059693 | None:intergenic | 40.0% |
| ! | CAAGCCTTATCTCACTAAGT+GGG | - | chr4.4:60060206-60060225 | None:intergenic | 40.0% |
| ! | CCCTAACCTGTTTTACAACA+GGG | - | chr4.4:60059729-60059748 | None:intergenic | 40.0% |
| ! | CCTAACCTGTTTTACAACAG+GGG | - | chr4.4:60059728-60059747 | None:intergenic | 40.0% |
| ! | CTATGCCAAACATCTAGAGT+TGG | + | chr4.4:60061014-60061033 | MS.gene63408:intron | 40.0% |
| ! | CTTTTCCCCTGTTGTAAAAC+AGG | + | chr4.4:60059720-60059739 | MS.gene63408:CDS | 40.0% |
| ! | GTTTTGCTGACATTGCTCTT+TGG | - | chr4.4:60062201-60062220 | None:intergenic | 40.0% |
| ! | TACGGCACTGTTTGTTGATA+TGG | + | chr4.4:60061560-60061579 | MS.gene63408:intron | 40.0% |
| ! | TCCAGACATTTTCTGATGCT+TGG | + | chr4.4:60063121-60063140 | MS.gene63408:CDS | 40.0% |
| ! | TCCCTAACCTGTTTTACAAC+AGG | - | chr4.4:60059730-60059749 | None:intergenic | 40.0% |
| ! | TTTTACAGATAAGACGTGGG+AGG | + | chr4.4:60060396-60060415 | MS.gene63408:intron | 40.0% |
| !! | CCTGTATCATTTGGTGGTTT+TGG | + | chr4.4:60061743-60061762 | MS.gene63408:CDS | 40.0% |
| !! | GTTGTTGAGAGTGCTCATAT+GGG | + | chr4.4:60060232-60060251 | MS.gene63408:intron | 40.0% |
| !! | TAATAGGAGAGCGTTGTGTT+TGG | - | chr4.4:60059958-60059977 | None:intergenic | 40.0% |
| !! | TGTTGTTGAGAGTGCTCATA+TGG | + | chr4.4:60060231-60060250 | MS.gene63408:intron | 40.0% |
| !! | TTCAGGTTCTGAAACTTTCC+GGG | + | chr4.4:60059653-60059672 | MS.gene63408:intron | 40.0% |
| ACAACAAGGCAAACACCATC+AGG | - | chr4.4:60060425-60060444 | None:intergenic | 45.0% | |
| AGAGGTAGTAGCTTAGTACC+TGG | - | chr4.4:60057865-60057884 | None:intergenic | 45.0% | |
| AGATATCCCACCTGCAGAAA+TGG | - | chr4.4:60062438-60062457 | None:intergenic | 45.0% | |
| AGATGCAACATCAACAGCTG+TGG | - | chr4.4:60060811-60060830 | None:intergenic | 45.0% | |
| AGGCTAACATATGCAGGGTT+TGG | + | chr4.4:60060007-60060026 | MS.gene63408:intron | 45.0% | |
| AGTTCTACGACCATTTCTGC+AGG | + | chr4.4:60062425-60062444 | MS.gene63408:CDS | 45.0% | |
| CAACCCCACTTAGTGAGATA+AGG | + | chr4.4:60060199-60060218 | MS.gene63408:intron | 45.0% | |
| CACAACGCTCTCCTATTATC+CGG | + | chr4.4:60059960-60059979 | MS.gene63408:intron | 45.0% | |
| CACTGAAAGAGGGTTGAGAA+AGG | - | chr4.4:60060363-60060382 | None:intergenic | 45.0% | |
| CATTAGGCCCGGGTTAAAAT+TGG | - | chr4.4:60062524-60062543 | None:intergenic | 45.0% | |
| CCACTTAGTGAGATAAGGCT+TGG | + | chr4.4:60060204-60060223 | MS.gene63408:intron | 45.0% | |
| CCAGCAACAATGCAACAGAA+AGG | - | chr4.4:60061809-60061828 | None:intergenic | 45.0% | |
| CCAGTGGAAAAGACATCTTG+AGG | + | chr4.4:60063358-60063377 | MS.gene63408:CDS | 45.0% | |
| CCCCTGTTGTAAAACAGGTT+AGG | + | chr4.4:60059725-60059744 | MS.gene63408:intron | 45.0% | |
| CCTTTCTGTTGCATTGTTGC+TGG | + | chr4.4:60061806-60061825 | MS.gene63408:intron | 45.0% | |
| CTACTAAAAGCAGCTGGTAG+CGG | - | chr4.4:60061599-60061618 | None:intergenic | 45.0% | |
| CTCAAAAAAGACTCCACCGA+GGG | - | chr4.4:60059309-60059328 | None:intergenic | 45.0% | |
| CTGTCCCAATTCCGGATAAT+AGG | - | chr4.4:60059974-60059993 | None:intergenic | 45.0% | |
| CTTATCTCACTAAGTGGGGT+TGG | - | chr4.4:60060201-60060220 | None:intergenic | 45.0% | |
| CTTCAGCTTCAACCCATCAA+TGG | + | chr4.4:60057761-60057780 | MS.gene63408:CDS | 45.0% | |
| GAAAACAGTAGATCACGTGG+AGG | + | chr4.4:60060041-60060060 | MS.gene63408:intron | 45.0% | |
| GAGGTAGTAGCTTAGTACCT+GGG | - | chr4.4:60057864-60057883 | None:intergenic | 45.0% | |
| GCAGGATGTTGTACAGTTTG+GGG | + | chr4.4:60062570-60062589 | MS.gene63408:intron | 45.0% | |
| GCCAAGCATCAGAAAATGTC+TGG | - | chr4.4:60063125-60063144 | None:intergenic | 45.0% | |
| GCTCTCCTATTATCCGGAAT+TGG | + | chr4.4:60059966-60059985 | MS.gene63408:intron | 45.0% | |
| GGAAAAGACATCTTGAGGCA+TGG | + | chr4.4:60063363-60063382 | MS.gene63408:CDS | 45.0% | |
| GGAATACACGAAGCAATCGA+TGG | + | chr4.4:60062019-60062038 | MS.gene63408:intron | 45.0% | |
| GGCTAACATATGCAGGGTTT+GGG | + | chr4.4:60060008-60060027 | MS.gene63408:intron | 45.0% | |
| GTTTCTCTGAGTGGTGAAGT+TGG | + | chr4.4:60057982-60058001 | MS.gene63408:CDS | 45.0% | |
| TACAGGTGATTGAATACCGC+TGG | - | chr4.4:60061729-60061748 | None:intergenic | 45.0% | |
| TACTAAAAGCAGCTGGTAGC+GGG | - | chr4.4:60061598-60061617 | None:intergenic | 45.0% | |
| TCAACCAGGATCGCCAAAAT+TGG | + | chr4.4:60060689-60060708 | MS.gene63408:CDS | 45.0% | |
| TCAGGCCAACTCTAGATGTT+TGG | - | chr4.4:60061022-60061041 | None:intergenic | 45.0% | |
| TCGACATGTGAGTATCAGTG+TGG | - | chr4.4:60058160-60058179 | None:intergenic | 45.0% | |
| TCTTTCCCACATATCGTGAG+AGG | + | chr4.4:60061165-60061184 | MS.gene63408:CDS | 45.0% | |
| TGCAGAAATGGTCGTAGAAC+TGG | - | chr4.4:60062426-60062445 | None:intergenic | 45.0% | |
| TGCATAGTCTGTCCCAATTC+CGG | - | chr4.4:60059982-60060001 | None:intergenic | 45.0% | |
| TGTTGCATTGTTGCTGGACA+TGG | + | chr4.4:60061812-60061831 | MS.gene63408:intron | 45.0% | |
| TTAGTGTGTGGAGGAACTCT+TGG | + | chr4.4:60058438-60058457 | MS.gene63408:CDS | 45.0% | |
| TTCGAGTGGCAATTGTGGAA+AGG | + | chr4.4:60058496-60058515 | MS.gene63408:CDS | 45.0% | |
| ! | AAACGTTTTATCTCCCTCGG+TGG | + | chr4.4:60059293-60059312 | MS.gene63408:CDS | 45.0% |
| ! | CAACCATGAAGCACTCAAGT+TGG | - | chr4.4:60062176-60062195 | None:intergenic | 45.0% |
| ! | CCAAGCCTTATCTCACTAAG+TGG | - | chr4.4:60060207-60060226 | None:intergenic | 45.0% |
| ! | CCTCAAGATGTCTTTTCCAC+TGG | - | chr4.4:60063361-60063380 | None:intergenic | 45.0% |
| ! | GATGGTGTTTGCCTTGTTGT+TGG | + | chr4.4:60060425-60060444 | MS.gene63408:CDS | 45.0% |
| ! | GTAGCTTAGTACCTGGGTTT+TGG | - | chr4.4:60057858-60057877 | None:intergenic | 45.0% |
| !! | AATTTTGGCGATCCTGGTTG+AGG | - | chr4.4:60060690-60060709 | None:intergenic | 45.0% |
| !! | ATGGAGAGTGTTTCTCTGAG+TGG | + | chr4.4:60057973-60057992 | MS.gene63408:CDS | 45.0% |
| !! | TCAGGTTCTGAAACTTTCCG+GGG | + | chr4.4:60059654-60059673 | MS.gene63408:intron | 45.0% |
| !! | TCTTCCAATTTTGGCGATCC+TGG | - | chr4.4:60060696-60060715 | None:intergenic | 45.0% |
| !! | TTGTAGTTTGGTGATGCCAG+CGG | + | chr4.4:60061710-60061729 | MS.gene63408:intron | 45.0% |
| !!! | CTCGGTGGAGTCTTTTTTGA+GGG | + | chr4.4:60059308-60059327 | MS.gene63408:CDS | 45.0% |
| !!! | CTTAGTACCTGGGTTTTGGA+GGG | - | chr4.4:60057854-60057873 | None:intergenic | 45.0% |
| !!! | TTTTTTTTCTCTGCCGCTGC+AGG | + | chr4.4:60059243-60059262 | MS.gene63408:intron | 45.0% |
| AACAGGGGAAAAGTTCCCCA+TGG | - | chr4.4:60059713-60059732 | None:intergenic | 50.0% | |
| AGAGCAGCAGAACTGAACAC+GGG | - | chr4.4:60061061-60061080 | None:intergenic | 50.0% | |
| AGCCCAACTTGAGTGCTTCA+TGG | + | chr4.4:60062170-60062189 | MS.gene63408:intron | 50.0% | |
| ATCAGCAAAGGTCGCGAGAA+AGG | - | chr4.4:60063155-60063174 | None:intergenic | 50.0% | |
| CACTGGAAACTCGTCTTCGA+TGG | - | chr4.4:60063344-60063363 | None:intergenic | 50.0% | |
| CATCGAAGACGAGTTTCCAG+TGG | + | chr4.4:60063342-60063361 | MS.gene63408:CDS | 50.0% | |
| CCTCAAAAAAGACTCCACCG+AGG | - | chr4.4:60059310-60059329 | None:intergenic | 50.0% | |
| CTAAGAGGGGCAAGAATCGA+TGG | - | chr4.4:60062991-60063010 | None:intergenic | 50.0% | |
| CTACGACCATTTCTGCAGGT+GGG | + | chr4.4:60062429-60062448 | MS.gene63408:intron | 50.0% | |
| CTTAGGACTGTCATTAGGCC+CGG | - | chr4.4:60062535-60062554 | None:intergenic | 50.0% | |
| GAGAGCAGCAGAACTGAACA+CGG | - | chr4.4:60061062-60061081 | None:intergenic | 50.0% | |
| GAGGCATGGAAATATGGAGC+TGG | + | chr4.4:60063377-60063396 | MS.gene63408:CDS | 50.0% | |
| GAGGCCGTGTTAACATAACG+AGG | - | chr4.4:60062615-60062634 | None:intergenic | 50.0% | |
| GGGACAGACTATGCATAGCA+AGG | + | chr4.4:60059987-60060006 | MS.gene63408:intron | 50.0% | |
| GTGAGTATCAGTGTGGTGTC+CGG | - | chr4.4:60058153-60058172 | None:intergenic | 50.0% | |
| TCTACGACCATTTCTGCAGG+TGG | + | chr4.4:60062428-60062447 | MS.gene63408:intron | 50.0% | |
| TCTCTGAGTGGTGAAGTTGG+TGG | + | chr4.4:60057985-60058004 | MS.gene63408:CDS | 50.0% | |
| TCTTCACAGGCATTTCCAGC+AGG | + | chr4.4:60060618-60060637 | MS.gene63408:intron | 50.0% | |
| TGTCTGTCTGGGCTTACTCT+CGG | + | chr4.4:60059121-60059140 | MS.gene63408:intron | 50.0% | |
| TTAGGACTGTCATTAGGCCC+GGG | - | chr4.4:60062534-60062553 | None:intergenic | 50.0% | |
| TTCTGCTGCTCTCTGCTTGA+TGG | + | chr4.4:60061069-60061088 | MS.gene63408:intron | 50.0% | |
| ! | GGGGCACTTTCAAAGACACT+TGG | + | chr4.4:60062589-60062608 | MS.gene63408:CDS | 50.0% |
| !! | ACTAAGTGGGGTTGGCTACA+TGG | - | chr4.4:60060193-60060212 | None:intergenic | 50.0% |
| !! | GCTTAGTACCTGGGTTTTGG+AGG | - | chr4.4:60057855-60057874 | None:intergenic | 50.0% |
| !!! | CCTCGGTGGAGTCTTTTTTG+AGG | + | chr4.4:60059307-60059326 | MS.gene63408:CDS | 50.0% |
| !!! | GTTTTGGAGGGAACAGCTTG+TGG | - | chr4.4:60057842-60057861 | None:intergenic | 50.0% |
| AGCTGTTCCCTCCAAAACCC+AGG | + | chr4.4:60057844-60057863 | MS.gene63408:CDS | 55.0% | |
| ATCAGTGTGGTGTCCGGTGT+CGG | - | chr4.4:60058147-60058166 | None:intergenic | 55.0% | |
| CAGGCATTTCCAGCAGGATC+AGG | + | chr4.4:60060624-60060643 | MS.gene63408:intron | 55.0% | |
| CATCTTGGGAGACTGTCAGC+TGG | + | chr4.4:60061779-60061798 | MS.gene63408:CDS | 55.0% | |
| CCTCACAGCAGGATCAGCAA+AGG | - | chr4.4:60063167-60063186 | None:intergenic | 55.0% | |
| CCTTTGCTGATCCTGCTGTG+AGG | + | chr4.4:60063164-60063183 | MS.gene63408:CDS | 55.0% | |
| GGAGCTTGACCAGGCATCTT+GGG | + | chr4.4:60061765-60061784 | MS.gene63408:CDS | 55.0% | |
| GGGTCTTCGAGTGGCAATTG+TGG | + | chr4.4:60058491-60058510 | MS.gene63408:CDS | 55.0% | |
| GTGTGCGATGCCAGCACATA+TGG | - | chr4.4:60058223-60058242 | None:intergenic | 55.0% | |
| TAAGCCTAACAGGCCTGCAG+CGG | - | chr4.4:60059259-60059278 | None:intergenic | 55.0% | |
| TCAAGAGGACCTGATCCTGC+TGG | - | chr4.4:60060636-60060655 | None:intergenic | 55.0% | |
| TCTGACACAGACACCGACAC+CGG | + | chr4.4:60058131-60058150 | MS.gene63408:intron | 55.0% | |
| TGACAGTCTCCCAAGATGCC+TGG | - | chr4.4:60061777-60061796 | None:intergenic | 55.0% | |
| ! | ATTTTCAAAGCCACGCGCGC+AGG | - | chr4.4:60060453-60060472 | None:intergenic | 55.0% |
| !! | AGTGGTGAAGTTGGTGGAGC+TGG | + | chr4.4:60057991-60058010 | MS.gene63408:CDS | 55.0% |
| !!! | GTGGTTTTGGGAGCTTGACC+AGG | + | chr4.4:60061756-60061775 | MS.gene63408:CDS | 55.0% |
| AAGACCCCTTGCGCACAAGG+CGG | - | chr4.4:60058478-60058497 | None:intergenic | 60.0% | |
| AGACGTGGGAGGAAGCCTGA+TGG | + | chr4.4:60060407-60060426 | MS.gene63408:CDS | 60.0% | |
| GCGCGCAGGTTCCAACAACA+AGG | - | chr4.4:60060439-60060458 | None:intergenic | 60.0% | |
| GGGAGCTTGACCAGGCATCT+TGG | + | chr4.4:60061764-60061783 | MS.gene63408:CDS | 60.0% | |
| TCGAAGACCCCTTGCGCACA+AGG | - | chr4.4:60058481-60058500 | None:intergenic | 60.0% | |
| !! | GGTGAAGTTGGTGGAGCTGG+AGG | + | chr4.4:60057994-60058013 | MS.gene63408:CDS | 60.0% |
| GTGCGCAAGGGGTCTTCGAG+TGG | + | chr4.4:60058482-60058501 | MS.gene63408:CDS | 65.0% | |
| GTTGTTGGAACCTGCGCGCG+TGG | + | chr4.4:60060440-60060459 | MS.gene63408:CDS | 65.0% | |
| TCTGCCGCTGCAGGCCTGTT+AGG | + | chr4.4:60059252-60059271 | MS.gene63408:intron | 65.0% | |
| TGCCACCGCCTTGTGCGCAA+GGG | + | chr4.4:60058470-60058489 | MS.gene63408:CDS | 65.0% | |
| TTGCCACCGCCTTGTGCGCA+AGG | + | chr4.4:60058469-60058488 | MS.gene63408:CDS | 65.0% | |
| ACCCCTTGCGCACAAGGCGG+TGG | - | chr4.4:60058475-60058494 | None:intergenic | 70.0% | |
| GCCACCGCCTTGTGCGCAAG+GGG | + | chr4.4:60058471-60058490 | MS.gene63408:CDS | 70.0% | |
| !! | GCAGCTGGTAGCGGGCTGTG+AGG | - | chr4.4:60061590-60061609 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 60057752 | 60063418 | 60057752 | ID=MS.gene63408 |
| chr4.4 | mRNA | 60057752 | 60063418 | 60057752 | ID=MS.gene63408.t1;Parent=MS.gene63408 |
| chr4.4 | exon | 60057752 | 60057865 | 60057752 | ID=MS.gene63408.t1.exon1;Parent=MS.gene63408.t1 |
| chr4.4 | CDS | 60057752 | 60057865 | 60057752 | ID=cds.MS.gene63408.t1;Parent=MS.gene63408.t1 |
| chr4.4 | exon | 60057967 | 60058084 | 60057967 | ID=MS.gene63408.t1.exon2;Parent=MS.gene63408.t1 |
| chr4.4 | CDS | 60057967 | 60058084 | 60057967 | ID=cds.MS.gene63408.t1;Parent=MS.gene63408.t1 |
| chr4.4 | exon | 60058346 | 60058533 | 60058346 | ID=MS.gene63408.t1.exon3;Parent=MS.gene63408.t1 |
| chr4.4 | CDS | 60058346 | 60058533 | 60058346 | ID=cds.MS.gene63408.t1;Parent=MS.gene63408.t1 |
| chr4.4 | exon | 60058623 | 60058730 | 60058623 | ID=MS.gene63408.t1.exon4;Parent=MS.gene63408.t1 |
| chr4.4 | CDS | 60058623 | 60058730 | 60058623 | ID=cds.MS.gene63408.t1;Parent=MS.gene63408.t1 |
| chr4.4 | exon | 60058924 | 60058988 | 60058924 | ID=MS.gene63408.t1.exon5;Parent=MS.gene63408.t1 |
| chr4.4 | CDS | 60058924 | 60058988 | 60058924 | ID=cds.MS.gene63408.t1;Parent=MS.gene63408.t1 |
| chr4.4 | exon | 60059265 | 60059370 | 60059265 | ID=MS.gene63408.t1.exon6;Parent=MS.gene63408.t1 |
| chr4.4 | CDS | 60059265 | 60059370 | 60059265 | ID=cds.MS.gene63408.t1;Parent=MS.gene63408.t1 |
| chr4.4 | exon | 60059658 | 60059741 | 60059658 | ID=MS.gene63408.t1.exon7;Parent=MS.gene63408.t1 |
| chr4.4 | CDS | 60059658 | 60059741 | 60059658 | ID=cds.MS.gene63408.t1;Parent=MS.gene63408.t1 |
| chr4.4 | exon | 60060404 | 60060550 | 60060404 | ID=MS.gene63408.t1.exon8;Parent=MS.gene63408.t1 |
| chr4.4 | CDS | 60060404 | 60060550 | 60060404 | ID=cds.MS.gene63408.t1;Parent=MS.gene63408.t1 |
| chr4.4 | exon | 60060627 | 60060755 | 60060627 | ID=MS.gene63408.t1.exon9;Parent=MS.gene63408.t1 |
| chr4.4 | CDS | 60060627 | 60060755 | 60060627 | ID=cds.MS.gene63408.t1;Parent=MS.gene63408.t1 |
| chr4.4 | exon | 60061119 | 60061186 | 60061119 | ID=MS.gene63408.t1.exon10;Parent=MS.gene63408.t1 |
| chr4.4 | CDS | 60061119 | 60061186 | 60061119 | ID=cds.MS.gene63408.t1;Parent=MS.gene63408.t1 |
| chr4.4 | exon | 60061595 | 60061628 | 60061595 | ID=MS.gene63408.t1.exon11;Parent=MS.gene63408.t1 |
| chr4.4 | CDS | 60061595 | 60061628 | 60061595 | ID=cds.MS.gene63408.t1;Parent=MS.gene63408.t1 |
| chr4.4 | exon | 60061716 | 60061800 | 60061716 | ID=MS.gene63408.t1.exon12;Parent=MS.gene63408.t1 |
| chr4.4 | CDS | 60061716 | 60061800 | 60061716 | ID=cds.MS.gene63408.t1;Parent=MS.gene63408.t1 |
| chr4.4 | exon | 60062020 | 60062087 | 60062020 | ID=MS.gene63408.t1.exon13;Parent=MS.gene63408.t1 |
| chr4.4 | CDS | 60062020 | 60062087 | 60062020 | ID=cds.MS.gene63408.t1;Parent=MS.gene63408.t1 |
| chr4.4 | exon | 60062172 | 60062285 | 60062172 | ID=MS.gene63408.t1.exon14;Parent=MS.gene63408.t1 |
| chr4.4 | CDS | 60062172 | 60062285 | 60062172 | ID=cds.MS.gene63408.t1;Parent=MS.gene63408.t1 |
| chr4.4 | exon | 60062411 | 60062446 | 60062411 | ID=MS.gene63408.t1.exon15;Parent=MS.gene63408.t1 |
| chr4.4 | CDS | 60062411 | 60062446 | 60062411 | ID=cds.MS.gene63408.t1;Parent=MS.gene63408.t1 |
| chr4.4 | exon | 60062574 | 60062660 | 60062574 | ID=MS.gene63408.t1.exon16;Parent=MS.gene63408.t1 |
| chr4.4 | CDS | 60062574 | 60062660 | 60062574 | ID=cds.MS.gene63408.t1;Parent=MS.gene63408.t1 |
| chr4.4 | exon | 60063094 | 60063185 | 60063094 | ID=MS.gene63408.t1.exon17;Parent=MS.gene63408.t1 |
| chr4.4 | CDS | 60063094 | 60063185 | 60063094 | ID=cds.MS.gene63408.t1;Parent=MS.gene63408.t1 |
| chr4.4 | exon | 60063322 | 60063418 | 60063322 | ID=MS.gene63408.t1.exon18;Parent=MS.gene63408.t1 |
| chr4.4 | CDS | 60063322 | 60063418 | 60063322 | ID=cds.MS.gene63408.t1;Parent=MS.gene63408.t1 |
| Gene Sequence |
| Protein sequence |
