Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68729.t1 | XP_003604074.1 | 99.6 | 226 | 1 | 0 | 1 | 226 | 47 | 272 | 2.00E-122 | 448.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68729.t1 | O80360 | 87.5 | 224 | 28 | 0 | 3 | 226 | 36 | 259 | 3.2e-108 | 392.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68729.t1 | G7J8L6 | 99.6 | 226 | 1 | 0 | 1 | 226 | 47 | 272 | 1.5e-122 | 448.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene68729 | 0.834194 | 3.45E-56 | -1.69E-46 |
| MS.gene049217 | MS.gene68729 | 0.801004 | 1.10E-48 | -1.69E-46 |
| MS.gene049222 | MS.gene68729 | 0.802394 | 5.73E-49 | -1.69E-46 |
| MS.gene049285 | MS.gene68729 | 0.809472 | 1.86E-50 | -1.69E-46 |
| MS.gene049351 | MS.gene68729 | 0.848864 | 4.67E-60 | -1.69E-46 |
| MS.gene049356 | MS.gene68729 | 0.810002 | 1.43E-50 | -1.69E-46 |
| MS.gene049369 | MS.gene68729 | 0.814102 | 1.83E-51 | -1.69E-46 |
| MS.gene049389 | MS.gene68729 | 0.836913 | 7.08E-57 | -1.69E-46 |
| MS.gene049427 | MS.gene68729 | 0.894759 | 1.82E-75 | -1.69E-46 |
| MS.gene049491 | MS.gene68729 | 0.84058 | 7.98E-58 | -1.69E-46 |
| MS.gene049609 | MS.gene68729 | 0.855644 | 5.49E-62 | -1.69E-46 |
| MS.gene049614 | MS.gene68729 | 0.83504 | 2.11E-56 | -1.69E-46 |
| MS.gene049661 | MS.gene68729 | 0.852587 | 4.19E-61 | -1.69E-46 |
| MS.gene049662 | MS.gene68729 | 0.849159 | 3.87E-60 | -1.69E-46 |
| MS.gene049758 | MS.gene68729 | 0.826697 | 2.35E-54 | -1.69E-46 |
| MS.gene049760 | MS.gene68729 | 0.842905 | 1.94E-58 | -1.69E-46 |
| MS.gene049805 | MS.gene68729 | 0.877438 | 6.28E-69 | -1.69E-46 |
| MS.gene050076 | MS.gene68729 | 0.850831 | 1.32E-60 | -1.69E-46 |
| MS.gene050099 | MS.gene68729 | 0.818883 | 1.55E-52 | -1.69E-46 |
| MS.gene050163 | MS.gene68729 | 0.812749 | 3.62E-51 | -1.69E-46 |
| MS.gene050301 | MS.gene68729 | 0.885721 | 6.37E-72 | -1.69E-46 |
| MS.gene050397 | MS.gene68729 | 0.827299 | 1.69E-54 | -1.69E-46 |
| MS.gene050406 | MS.gene68729 | 0.814556 | 1.45E-51 | -1.69E-46 |
| MS.gene050432 | MS.gene68729 | 0.873693 | 1.21E-67 | -1.69E-46 |
| MS.gene050464 | MS.gene68729 | 0.844483 | 7.35E-59 | -1.69E-46 |
| MS.gene050529 | MS.gene68729 | 0.859965 | 2.87E-63 | -1.69E-46 |
| MS.gene05053 | MS.gene68729 | 0.80096 | 1.13E-48 | -1.69E-46 |
| MS.gene050593 | MS.gene68729 | 0.870737 | 1.16E-66 | -1.69E-46 |
| MS.gene050670 | MS.gene68729 | 0.893898 | 4.09E-75 | -1.69E-46 |
| MS.gene050747 | MS.gene68729 | 0.822811 | 1.94E-53 | -1.69E-46 |
| MS.gene050767 | MS.gene68729 | 0.898387 | 5.58E-77 | -1.69E-46 |
| MS.gene050770 | MS.gene68729 | 0.90098 | 4.25E-78 | -1.69E-46 |
| MS.gene050772 | MS.gene68729 | 0.859714 | 3.42E-63 | -1.69E-46 |
| MS.gene050783 | MS.gene68729 | 0.832525 | 9.00E-56 | -1.69E-46 |
| MS.gene05080 | MS.gene68729 | 0.802007 | 6.88E-49 | -1.69E-46 |
| MS.gene050812 | MS.gene68729 | 0.848013 | 8.03E-60 | -1.69E-46 |
| MS.gene050950 | MS.gene68729 | 0.822126 | 2.80E-53 | -1.69E-46 |
| MS.gene05101 | MS.gene68729 | 0.895152 | 1.26E-75 | -1.69E-46 |
| MS.gene05105 | MS.gene68729 | 0.898359 | 5.73E-77 | -1.69E-46 |
| MS.gene051228 | MS.gene68729 | 0.845039 | 5.21E-59 | -1.69E-46 |
| MS.gene051387 | MS.gene68729 | 0.877672 | 5.21E-69 | -1.69E-46 |
| MS.gene051471 | MS.gene68729 | 0.863905 | 1.78E-64 | -1.69E-46 |
| MS.gene051582 | MS.gene68729 | 0.848917 | 4.52E-60 | -1.69E-46 |
| MS.gene051666 | MS.gene68729 | 0.873945 | 9.92E-68 | -1.69E-46 |
| MS.gene051692 | MS.gene68729 | 0.819484 | 1.13E-52 | -1.69E-46 |
| MS.gene051694 | MS.gene68729 | 0.805581 | 1.25E-49 | -1.69E-46 |
| MS.gene051810 | MS.gene68729 | 0.807294 | 5.42E-50 | -1.69E-46 |
| MS.gene051858 | MS.gene68729 | 0.821312 | 4.32E-53 | -1.69E-46 |
| MS.gene051877 | MS.gene68729 | 0.804363 | 2.24E-49 | -1.69E-46 |
| MS.gene052078 | MS.gene68729 | 0.881418 | 2.44E-70 | -1.69E-46 |
| MS.gene052178 | MS.gene68729 | 0.813737 | 2.20E-51 | -1.69E-46 |
| MS.gene052188 | MS.gene68729 | 0.879932 | 8.32E-70 | -1.69E-46 |
| MS.gene052253 | MS.gene68729 | 0.8238 | 1.14E-53 | -1.69E-46 |
| MS.gene052271 | MS.gene68729 | 0.847489 | 1.12E-59 | -1.69E-46 |
| MS.gene052290 | MS.gene68729 | 0.842186 | 3.02E-58 | -1.69E-46 |
| MS.gene052293 | MS.gene68729 | 0.806988 | 6.29E-50 | -1.69E-46 |
| MS.gene052310 | MS.gene68729 | 0.917722 | 3.75E-86 | -1.69E-46 |
| MS.gene052322 | MS.gene68729 | 0.849137 | 3.92E-60 | -1.69E-46 |
| MS.gene052326 | MS.gene68729 | 0.853945 | 1.71E-61 | -1.69E-46 |
| MS.gene052340 | MS.gene68729 | 0.852633 | 4.06E-61 | -1.69E-46 |
| MS.gene052379 | MS.gene68729 | 0.850481 | 1.65E-60 | -1.69E-46 |
| MS.gene052421 | MS.gene68729 | 0.872989 | 2.08E-67 | -1.69E-46 |
| MS.gene052481 | MS.gene68729 | 0.85237 | 4.83E-61 | -1.69E-46 |
| MS.gene052484 | MS.gene68729 | 0.861753 | 8.22E-64 | -1.69E-46 |
| MS.gene052485 | MS.gene68729 | 0.852463 | 4.54E-61 | -1.69E-46 |
| MS.gene052508 | MS.gene68729 | 0.801986 | 6.95E-49 | -1.69E-46 |
| MS.gene052615 | MS.gene68729 | 0.839597 | 1.44E-57 | -1.69E-46 |
| MS.gene052870 | MS.gene68729 | 0.809125 | 2.21E-50 | -1.69E-46 |
| MS.gene052982 | MS.gene68729 | 0.810161 | 1.32E-50 | -1.69E-46 |
| MS.gene053009 | MS.gene68729 | 0.874765 | 5.23E-68 | -1.69E-46 |
| MS.gene053103 | MS.gene68729 | 0.875326 | 3.36E-68 | -1.69E-46 |
| MS.gene053104 | MS.gene68729 | 0.865456 | 5.83E-65 | -1.69E-46 |
| MS.gene053107 | MS.gene68729 | 0.837943 | 3.86E-57 | -1.69E-46 |
| MS.gene053207 | MS.gene68729 | 0.853535 | 2.24E-61 | -1.69E-46 |
| MS.gene053209 | MS.gene68729 | 0.883081 | 6.07E-71 | -1.69E-46 |
| MS.gene053213 | MS.gene68729 | 0.835298 | 1.82E-56 | -1.69E-46 |
| MS.gene053286 | MS.gene68729 | 0.821766 | 3.39E-53 | -1.69E-46 |
| MS.gene053322 | MS.gene68729 | 0.909859 | 3.57E-82 | -1.69E-46 |
| MS.gene053384 | MS.gene68729 | 0.821713 | 3.49E-53 | -1.69E-46 |
| MS.gene053449 | MS.gene68729 | 0.81269 | 3.73E-51 | -1.69E-46 |
| MS.gene053557 | MS.gene68729 | 0.829101 | 6.21E-55 | -1.69E-46 |
| MS.gene053574 | MS.gene68729 | 0.818308 | 2.10E-52 | -1.69E-46 |
| MS.gene053632 | MS.gene68729 | 0.817201 | 3.73E-52 | -1.69E-46 |
| MS.gene053758 | MS.gene68729 | 0.809288 | 2.04E-50 | -1.69E-46 |
| MS.gene053813 | MS.gene68729 | 0.82682 | 2.20E-54 | -1.69E-46 |
| MS.gene053836 | MS.gene68729 | 0.818045 | 2.41E-52 | -1.69E-46 |
| MS.gene053912 | MS.gene68729 | 0.810128 | 1.34E-50 | -1.69E-46 |
| MS.gene053916 | MS.gene68729 | 0.809195 | 2.13E-50 | -1.69E-46 |
| MS.gene054123 | MS.gene68729 | 0.860307 | 2.26E-63 | -1.69E-46 |
| MS.gene054376 | MS.gene68729 | 0.905124 | 5.98E-80 | -1.69E-46 |
| MS.gene05455 | MS.gene68729 | 0.829934 | 3.90E-55 | -1.69E-46 |
| MS.gene054600 | MS.gene68729 | 0.808128 | 3.61E-50 | -1.69E-46 |
| MS.gene054642 | MS.gene68729 | 0.834514 | 2.87E-56 | -1.69E-46 |
| MS.gene054802 | MS.gene68729 | 0.871737 | 5.44E-67 | -1.69E-46 |
| MS.gene054803 | MS.gene68729 | 0.869919 | 2.16E-66 | -1.69E-46 |
| MS.gene054804 | MS.gene68729 | 0.875086 | 4.07E-68 | -1.69E-46 |
| MS.gene054955 | MS.gene68729 | 0.832011 | 1.21E-55 | -1.69E-46 |
| MS.gene05505 | MS.gene68729 | 0.864325 | 1.32E-64 | -1.69E-46 |
| MS.gene055116 | MS.gene68729 | 0.882551 | 9.47E-71 | -1.69E-46 |
| MS.gene055206 | MS.gene68729 | 0.82627 | 2.97E-54 | -1.69E-46 |
| MS.gene055254 | MS.gene68729 | 0.834629 | 2.68E-56 | -1.69E-46 |
| MS.gene055277 | MS.gene68729 | 0.87215 | 3.97E-67 | -1.69E-46 |
| MS.gene055390 | MS.gene68729 | 0.83559 | 1.54E-56 | -1.69E-46 |
| MS.gene055397 | MS.gene68729 | 0.878239 | 3.30E-69 | -1.69E-46 |
| MS.gene055412 | MS.gene68729 | 0.870414 | 1.49E-66 | -1.69E-46 |
| MS.gene055422 | MS.gene68729 | 0.865265 | 6.70E-65 | -1.69E-46 |
| MS.gene055428 | MS.gene68729 | 0.833381 | 5.51E-56 | -1.69E-46 |
| MS.gene055499 | MS.gene68729 | 0.872386 | 3.31E-67 | -1.69E-46 |
| MS.gene055636 | MS.gene68729 | 0.808146 | 3.57E-50 | -1.69E-46 |
| MS.gene055647 | MS.gene68729 | 0.876898 | 9.68E-69 | -1.69E-46 |
| MS.gene055722 | MS.gene68729 | 0.855298 | 6.93E-62 | -1.69E-46 |
| MS.gene055896 | MS.gene68729 | 0.829282 | 5.62E-55 | -1.69E-46 |
| MS.gene05592 | MS.gene68729 | 0.887198 | 1.76E-72 | -1.69E-46 |
| MS.gene055941 | MS.gene68729 | 0.8221 | 2.84E-53 | -1.69E-46 |
| MS.gene05602 | MS.gene68729 | 0.816131 | 6.48E-52 | -1.69E-46 |
| MS.gene056083 | MS.gene68729 | 0.842462 | 2.55E-58 | -1.69E-46 |
| MS.gene056191 | MS.gene68729 | 0.833725 | 4.52E-56 | -1.69E-46 |
| MS.gene056374 | MS.gene68729 | 0.825688 | 4.09E-54 | -1.69E-46 |
| MS.gene056407 | MS.gene68729 | 0.882939 | 6.84E-71 | -1.69E-46 |
| MS.gene056410 | MS.gene68729 | 0.851356 | 9.36E-61 | -1.69E-46 |
| MS.gene056511 | MS.gene68729 | 0.840825 | 6.88E-58 | -1.69E-46 |
| MS.gene056609 | MS.gene68729 | 0.87471 | 5.46E-68 | -1.69E-46 |
| MS.gene056612 | MS.gene68729 | 0.834434 | 3.01E-56 | -1.69E-46 |
| MS.gene056659 | MS.gene68729 | 0.803122 | 4.05E-49 | -1.69E-46 |
| MS.gene056796 | MS.gene68729 | 0.857253 | 1.85E-62 | -1.69E-46 |
| MS.gene056897 | MS.gene68729 | 0.88135 | 2.58E-70 | -1.69E-46 |
| MS.gene057011 | MS.gene68729 | 0.902005 | 1.51E-78 | -1.69E-46 |
| MS.gene05702 | MS.gene68729 | 0.837321 | 5.57E-57 | -1.69E-46 |
| MS.gene057076 | MS.gene68729 | 0.815773 | 7.79E-52 | -1.69E-46 |
| MS.gene057123 | MS.gene68729 | 0.852431 | 4.64E-61 | -1.69E-46 |
| MS.gene057124 | MS.gene68729 | 0.864626 | 1.06E-64 | -1.69E-46 |
| MS.gene057129 | MS.gene68729 | 0.898404 | 5.48E-77 | -1.69E-46 |
| MS.gene057146 | MS.gene68729 | 0.863993 | 1.67E-64 | -1.69E-46 |
| MS.gene057295 | MS.gene68729 | 0.845995 | 2.87E-59 | -1.69E-46 |
| MS.gene057331 | MS.gene68729 | 0.873483 | 1.42E-67 | -1.69E-46 |
| MS.gene05735 | MS.gene68729 | 0.835623 | 1.51E-56 | -1.69E-46 |
| MS.gene057416 | MS.gene68729 | 0.885474 | 7.88E-72 | -1.69E-46 |
| MS.gene057448 | MS.gene68729 | 0.835278 | 1.84E-56 | -1.69E-46 |
| MS.gene057449 | MS.gene68729 | 0.830324 | 3.13E-55 | -1.69E-46 |
| MS.gene057450 | MS.gene68729 | 0.844396 | 7.76E-59 | -1.69E-46 |
| MS.gene057537 | MS.gene68729 | 0.802549 | 5.32E-49 | -1.69E-46 |
| MS.gene057749 | MS.gene68729 | 0.817298 | 3.55E-52 | -1.69E-46 |
| MS.gene057823 | MS.gene68729 | 0.81691 | 4.33E-52 | -1.69E-46 |
| MS.gene058002 | MS.gene68729 | 0.837615 | 4.68E-57 | -1.69E-46 |
| MS.gene058006 | MS.gene68729 | 0.821695 | 3.52E-53 | -1.69E-46 |
| MS.gene058007 | MS.gene68729 | 0.808687 | 2.74E-50 | -1.69E-46 |
| MS.gene058019 | MS.gene68729 | 0.871843 | 5.02E-67 | -1.69E-46 |
| MS.gene058082 | MS.gene68729 | 0.8648 | 9.37E-65 | -1.69E-46 |
| MS.gene05811 | MS.gene68729 | 0.829794 | 4.22E-55 | -1.69E-46 |
| MS.gene058130 | MS.gene68729 | 0.81442 | 1.55E-51 | -1.69E-46 |
| MS.gene058233 | MS.gene68729 | 0.850253 | 1.91E-60 | -1.69E-46 |
| MS.gene058276 | MS.gene68729 | 0.824952 | 6.11E-54 | -1.69E-46 |
| MS.gene058293 | MS.gene68729 | 0.923303 | 3.17E-89 | -1.69E-46 |
| MS.gene058323 | MS.gene68729 | 0.853282 | 2.65E-61 | -1.69E-46 |
| MS.gene058365 | MS.gene68729 | 0.844724 | 6.33E-59 | -1.69E-46 |
| MS.gene058419 | MS.gene68729 | 0.814375 | 1.59E-51 | -1.69E-46 |
| MS.gene058660 | MS.gene68729 | 0.913961 | 3.35E-84 | -1.69E-46 |
| MS.gene058700 | MS.gene68729 | 0.832056 | 1.17E-55 | -1.69E-46 |
| MS.gene058723 | MS.gene68729 | 0.808644 | 2.80E-50 | -1.69E-46 |
| MS.gene058748 | MS.gene68729 | 0.805809 | 1.12E-49 | -1.69E-46 |
| MS.gene058787 | MS.gene68729 | 0.842314 | 2.79E-58 | -1.69E-46 |
| MS.gene05883 | MS.gene68729 | 0.811496 | 6.80E-51 | -1.69E-46 |
| MS.gene058845 | MS.gene68729 | 0.801468 | 8.88E-49 | -1.69E-46 |
| MS.gene05886 | MS.gene68729 | 0.822231 | 2.65E-53 | -1.69E-46 |
| MS.gene058928 | MS.gene68729 | 0.83984 | 1.25E-57 | -1.69E-46 |
| MS.gene058993 | MS.gene68729 | 0.835523 | 1.60E-56 | -1.69E-46 |
| MS.gene059029 | MS.gene68729 | 0.83234 | 1.00E-55 | -1.69E-46 |
| MS.gene05907 | MS.gene68729 | 0.857785 | 1.29E-62 | -1.69E-46 |
| MS.gene059141 | MS.gene68729 | 0.809345 | 1.98E-50 | -1.69E-46 |
| MS.gene059326 | MS.gene68729 | 0.865514 | 5.59E-65 | -1.69E-46 |
| MS.gene059342 | MS.gene68729 | 0.824258 | 8.90E-54 | -1.69E-46 |
| MS.gene05934 | MS.gene68729 | 0.82568 | 4.11E-54 | -1.69E-46 |
| MS.gene059366 | MS.gene68729 | 0.842423 | 2.61E-58 | -1.69E-46 |
| MS.gene059518 | MS.gene68729 | 0.816706 | 4.81E-52 | -1.69E-46 |
| MS.gene059536 | MS.gene68729 | 0.908144 | 2.36E-81 | -1.69E-46 |
| MS.gene059597 | MS.gene68729 | 0.862771 | 4.00E-64 | -1.69E-46 |
| MS.gene05959 | MS.gene68729 | 0.842996 | 1.84E-58 | -1.69E-46 |
| MS.gene059676 | MS.gene68729 | 0.914404 | 2.00E-84 | -1.69E-46 |
| MS.gene059688 | MS.gene68729 | 0.917541 | 4.68E-86 | -1.69E-46 |
| MS.gene059692 | MS.gene68729 | 0.919819 | 2.79E-87 | -1.69E-46 |
| MS.gene059695 | MS.gene68729 | 0.923439 | 2.65E-89 | -1.69E-46 |
| MS.gene059708 | MS.gene68729 | 0.805793 | 1.12E-49 | -1.69E-46 |
| MS.gene059711 | MS.gene68729 | 0.833404 | 5.44E-56 | -1.69E-46 |
| MS.gene059718 | MS.gene68729 | 0.829418 | 5.21E-55 | -1.69E-46 |
| MS.gene05984 | MS.gene68729 | 0.823465 | 1.37E-53 | -1.69E-46 |
| MS.gene05986 | MS.gene68729 | 0.800415 | 1.46E-48 | -1.69E-46 |
| MS.gene059894 | MS.gene68729 | 0.846809 | 1.72E-59 | -1.69E-46 |
| MS.gene059902 | MS.gene68729 | 0.821379 | 4.17E-53 | -1.69E-46 |
| MS.gene059960 | MS.gene68729 | 0.927114 | 1.84E-91 | -1.69E-46 |
| MS.gene059974 | MS.gene68729 | 0.81865 | 1.75E-52 | -1.69E-46 |
| MS.gene060193 | MS.gene68729 | 0.84013 | 1.05E-57 | -1.69E-46 |
| MS.gene06037 | MS.gene68729 | 0.814354 | 1.61E-51 | -1.69E-46 |
| MS.gene060403 | MS.gene68729 | 0.850225 | 1.95E-60 | -1.69E-46 |
| MS.gene060407 | MS.gene68729 | 0.821545 | 3.81E-53 | -1.69E-46 |
| MS.gene060804 | MS.gene68729 | 0.873183 | 1.79E-67 | -1.69E-46 |
| MS.gene060818 | MS.gene68729 | 0.862611 | 4.48E-64 | -1.69E-46 |
| MS.gene060835 | MS.gene68729 | 0.824859 | 6.42E-54 | -1.69E-46 |
| MS.gene060837 | MS.gene68729 | 0.847638 | 1.02E-59 | -1.69E-46 |
| MS.gene06090 | MS.gene68729 | 0.817891 | 2.61E-52 | -1.69E-46 |
| MS.gene06092 | MS.gene68729 | 0.847826 | 9.04E-60 | -1.69E-46 |
| MS.gene061041 | MS.gene68729 | 0.853092 | 3.00E-61 | -1.69E-46 |
| MS.gene061049 | MS.gene68729 | 0.854429 | 1.24E-61 | -1.69E-46 |
| MS.gene061051 | MS.gene68729 | -0.880064 | 7.46E-70 | -1.69E-46 |
| MS.gene061150 | MS.gene68729 | 0.846101 | 2.68E-59 | -1.69E-46 |
| MS.gene061154 | MS.gene68729 | 0.833607 | 4.84E-56 | -1.69E-46 |
| MS.gene061200 | MS.gene68729 | 0.906348 | 1.63E-80 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68729.t1 | MTR_3g118210 | 99.558 | 226 | 1 | 0 | 1 | 226 | 47 | 272 | 9.90e-165 | 455 |
| MS.gene68729.t1 | MTR_6g006970 | 42.718 | 206 | 114 | 4 | 12 | 216 | 49 | 251 | 9.85e-47 | 156 |
| MS.gene68729.t1 | MTR_1g093060 | 40.777 | 206 | 118 | 4 | 12 | 216 | 102 | 304 | 1.06e-42 | 147 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68729.t1 | AT2G43030 | 82.743 | 226 | 39 | 0 | 1 | 226 | 46 | 271 | 4.47e-130 | 368 |
| MS.gene68729.t1 | AT3G17465 | 37.037 | 216 | 133 | 3 | 11 | 225 | 77 | 290 | 2.47e-38 | 135 |
Find 78 sgRNAs with CRISPR-Local
Find 89 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTAACAATCTTAAGCTTTC+TGG | 0.097361 | 3.2:-93188162 | None:intergenic |
| AAAGAGACTAATTAATTCTT+TGG | 0.209215 | 3.2:-93188287 | None:intergenic |
| AAAGCTCATCATTCCCAATT+TGG | 0.228676 | 3.2:-93187572 | None:intergenic |
| CAAATTGACCAAACCTGAAA+TGG | 0.282604 | 3.2:+93187729 | MS.gene68729:CDS |
| CATTCCTATGCGACATCTTC+AGG | 0.315485 | 3.2:+93187774 | MS.gene68729:CDS |
| ATGATCAAAGGTGCTCTTCC+TGG | 0.365904 | 3.2:+93188209 | MS.gene68729:CDS |
| TTTCGTCTTCAATCCGTTGA+TGG | 0.384156 | 3.2:+93187799 | MS.gene68729:CDS |
| TCAAATACAAGGCGCTGATT+AGG | 0.398930 | 3.2:-93187829 | None:intergenic |
| AAGATGACCCATTTCAGGTT+TGG | 0.399688 | 3.2:-93187737 | None:intergenic |
| CTCTTGGAACCATGGCTCAT+TGG | 0.403785 | 3.2:-93188041 | None:intergenic |
| TGGTGTGATGGGTACCAAAT+TGG | 0.414953 | 3.2:+93187558 | MS.gene68729:CDS |
| GTTGTTCCCGTCACTGTTGT+CGG | 0.415769 | 3.2:+93187613 | MS.gene68729:CDS |
| GGTGATCTTGTTGATGTCTC+TGG | 0.428399 | 3.2:+93187868 | MS.gene68729:CDS |
| AAGCTTTCTGGTCTTCCTGT+TGG | 0.434373 | 3.2:-93188150 | None:intergenic |
| ACGCCGTCCAAGTTGGTTAC+CGG | 0.438083 | 3.2:+93187692 | MS.gene68729:CDS |
| TCCAAGTTGTCTGTGACTCT+TGG | 0.442433 | 3.2:-93188057 | None:intergenic |
| TCCAAGAGTCACAGACAACT+TGG | 0.460086 | 3.2:+93188056 | MS.gene68729:CDS |
| TTCTTGCCAACAATCTTAGC+GGG | 0.460342 | 3.2:-93188260 | None:intergenic |
| ACTGTTGTCGGTTTCAAAGA+AGG | 0.461503 | 3.2:+93187625 | MS.gene68729:CDS |
| AGAGGCTGGTGTTGGTGTGA+TGG | 0.463975 | 3.2:+93187546 | MS.gene68729:CDS |
| TACACCTGGTCGCGTATACA+AGG | 0.469173 | 3.2:+93188097 | MS.gene68729:CDS |
| TTTCAGGTTTGGTCAATTTG+CGG | 0.469193 | 3.2:-93187726 | None:intergenic |
| GTTGTAACCGTCGGTGGCGT+CGG | 0.473671 | 3.2:-93187671 | None:intergenic |
| AAAGAAGATGCCTGGTAGGA+TGG | 0.474224 | 3.2:+93188121 | MS.gene68729:CDS |
| GAGGCTGGTGTTGGTGTGAT+GGG | 0.474712 | 3.2:+93187547 | MS.gene68729:CDS |
| TAACCCTCCGGTAACCAACT+TGG | 0.478957 | 3.2:-93187699 | None:intergenic |
| CACAGACAACTTGGATCCAT+TGG | 0.481197 | 3.2:+93188065 | MS.gene68729:CDS |
| GTAGGATGGGTGGAACCAAC+AGG | 0.493432 | 3.2:+93188135 | MS.gene68729:CDS |
| TACGCGACCAGGTGTAGTTC+CGG | 0.494636 | 3.2:-93188090 | None:intergenic |
| TTTCCCTTGTATACGCGACC+AGG | 0.499382 | 3.2:-93188101 | None:intergenic |
| AGAAGATTACCAGGCTTACC+AGG | 0.500896 | 3.2:-93188227 | None:intergenic |
| TGAAATGGGTCATCTTGAAA+AGG | 0.503372 | 3.2:+93187744 | MS.gene68729:CDS |
| ACGGGAACAACTTCACCGTT+AGG | 0.508452 | 3.2:-93187601 | None:intergenic |
| AAGAAGATGCCTGGTAGGAT+GGG | 0.509948 | 3.2:+93188122 | MS.gene68729:CDS |
| GGTGTGATGGGTACCAAATT+GGG | 0.512034 | 3.2:+93187559 | MS.gene68729:CDS |
| AAATTGACCAAACCTGAAAT+GGG | 0.513032 | 3.2:+93187730 | MS.gene68729:CDS |
| TTGAAACCGACAACAGTGAC+GGG | 0.513527 | 3.2:-93187619 | None:intergenic |
| GGTGCTCTTCCTGGTAAGCC+TGG | 0.514459 | 3.2:+93188218 | MS.gene68729:CDS |
| AAGCGTCATAACTTCAAAAG+AGG | 0.517261 | 3.2:+93188017 | MS.gene68729:CDS |
| AGGTGTAGTTCCGGCACCAA+TGG | 0.518535 | 3.2:-93188081 | None:intergenic |
| TTGGTTCCACCCATCCTACC+AGG | 0.519178 | 3.2:-93188131 | None:intergenic |
| ATGGGTCATCTTGAAAAGGT+TGG | 0.519826 | 3.2:+93187748 | MS.gene68729:CDS |
| GATGTCTCTGGCACCACCAT+CGG | 0.522268 | 3.2:+93187880 | MS.gene68729:CDS |
| GGTGGTGAAAATGAGCTTAG+AGG | 0.522460 | 3.2:+93187528 | MS.gene68729:CDS |
| GTAAGCCTGGTAATCTTCTA+CGG | 0.530779 | 3.2:+93188231 | MS.gene68729:CDS |
| GAACAACTTCACCGTTAGGT+TGG | 0.533148 | 3.2:-93187597 | None:intergenic |
| CTCTGGCACCACCATCGGCA+AGG | 0.534330 | 3.2:+93187885 | MS.gene68729:CDS |
| TACAAGGGAAAGAAGATGCC+TGG | 0.536322 | 3.2:+93188113 | MS.gene68729:CDS |
| GTCTGTGACTCTTGGAACCA+TGG | 0.543733 | 3.2:-93188049 | None:intergenic |
| CTGAAGATGTCGCATAGGAA+TGG | 0.560330 | 3.2:-93187773 | None:intergenic |
| CAACTTGGATCCATTGGTGC+CGG | 0.569215 | 3.2:+93188071 | MS.gene68729:CDS |
| ATTTGCGGTCTCTAACCCTC+CGG | 0.569415 | 3.2:-93187711 | None:intergenic |
| ATTAGGTTCAAAACCATCAA+CGG | 0.570807 | 3.2:-93187812 | None:intergenic |
| TCTGGCACCACCATCGGCAA+GGG | 0.572275 | 3.2:+93187886 | MS.gene68729:CDS |
| CTTAATGTTATCATGATCAA+AGG | 0.572918 | 3.2:+93188197 | MS.gene68729:CDS |
| ATTGGTGCCGGAACTACACC+TGG | 0.580799 | 3.2:+93188083 | MS.gene68729:CDS |
| TTTGAAACCGACAACAGTGA+CGG | 0.586413 | 3.2:-93187620 | None:intergenic |
| CCGTCCAAGTTGGTTACCGG+AGG | 0.591201 | 3.2:+93187695 | MS.gene68729:CDS |
| GTTCTTGCCAACAATCTTAG+CGG | 0.594511 | 3.2:-93188261 | None:intergenic |
| AAGATGCCTGGTAGGATGGG+TGG | 0.594546 | 3.2:+93188125 | MS.gene68729:CDS |
| ACCTTGAAAACCCTTGCCGA+TGG | 0.600155 | 3.2:-93187896 | None:intergenic |
| TGAAAAGCTCATCAAATACA+AGG | 0.600821 | 3.2:-93187840 | None:intergenic |
| GCTATCCGTAGAAGATTACC+AGG | 0.602366 | 3.2:-93188236 | None:intergenic |
| AGGGAAAGAAGATGCCTGGT+AGG | 0.605040 | 3.2:+93188117 | MS.gene68729:CDS |
| TTGAAAACCCTTGCCGATGG+TGG | 0.607518 | 3.2:-93187893 | None:intergenic |
| ATCAAAACCGACGCCACCGA+CGG | 0.609949 | 3.2:+93187664 | MS.gene68729:CDS |
| GGTTACAACGCCGTCCAAGT+TGG | 0.618166 | 3.2:+93187685 | MS.gene68729:CDS |
| GTGAAAATGAGCTTAGAGGC+TGG | 0.634928 | 3.2:+93187532 | MS.gene68729:CDS |
| TCTTGCCAACAATCTTAGCG+GGG | 0.638407 | 3.2:-93188259 | None:intergenic |
| CCTCCGGTAACCAACTTGGA+CGG | 0.639997 | 3.2:-93187695 | None:intergenic |
| ATGAGCTTAGAGGCTGGTGT+TGG | 0.640133 | 3.2:+93187538 | MS.gene68729:CDS |
| AAAAGAGGACCAATGAGCCA+TGG | 0.640937 | 3.2:+93188032 | MS.gene68729:CDS |
| CGTCCAAGTTGGTTACCGGA+GGG | 0.643249 | 3.2:+93187696 | MS.gene68729:CDS |
| CTTGCCAACAATCTTAGCGG+GGG | 0.643846 | 3.2:-93188258 | None:intergenic |
| GACGGCGTTGTAACCGTCGG+TGG | 0.648118 | 3.2:-93187677 | None:intergenic |
| AACTCCTGAAGATGTCGCAT+AGG | 0.655881 | 3.2:-93187778 | None:intergenic |
| TTGGACGGCGTTGTAACCGT+CGG | 0.663802 | 3.2:-93187680 | None:intergenic |
| ACACCTGGTCGCGTATACAA+GGG | 0.687415 | 3.2:+93188098 | MS.gene68729:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATAATATCTTTCACTAA+TGG | + | chr3.2:93187964-93187983 | MS.gene68729:intron | 15.0% |
| ! | CTTAATGTTATCATGATCAA+AGG | + | chr3.2:93188197-93188216 | MS.gene68729:CDS | 25.0% |
| ! | TTTAACAATCTTAAGCTTTC+TGG | - | chr3.2:93188165-93188184 | None:intergenic | 25.0% |
| AAATTGACCAAACCTGAAAT+GGG | + | chr3.2:93187730-93187749 | MS.gene68729:CDS | 30.0% | |
| ATGAACTTACTTACTTTGAC+AGG | + | chr3.2:93187987-93188006 | MS.gene68729:intron | 30.0% | |
| ATTAGGTTCAAAACCATCAA+CGG | - | chr3.2:93187815-93187834 | None:intergenic | 30.0% | |
| TATCAACTCAACAACTAGAA+GGG | - | chr3.2:93187947-93187966 | None:intergenic | 30.0% | |
| TGAAAAGCTCATCAAATACA+AGG | - | chr3.2:93187843-93187862 | None:intergenic | 30.0% | |
| TTATCAACTCAACAACTAGA+AGG | - | chr3.2:93187948-93187967 | None:intergenic | 30.0% | |
| ! | TTTGATGAGCTTTTCAATGA+AGG | + | chr3.2:93187847-93187866 | MS.gene68729:CDS | 30.0% |
| AAAGCTCATCATTCCCAATT+TGG | - | chr3.2:93187575-93187594 | None:intergenic | 35.0% | |
| AACTTACTTACTTTGACAGG+TGG | + | chr3.2:93187990-93188009 | MS.gene68729:intron | 35.0% | |
| AAGCGTCATAACTTCAAAAG+AGG | + | chr3.2:93188017-93188036 | MS.gene68729:CDS | 35.0% | |
| CAAATTGACCAAACCTGAAA+TGG | + | chr3.2:93187729-93187748 | MS.gene68729:CDS | 35.0% | |
| TGAAATGGGTCATCTTGAAA+AGG | + | chr3.2:93187744-93187763 | MS.gene68729:CDS | 35.0% | |
| !! | ATGAGCTTTTTCCAACCTAA+CGG | + | chr3.2:93187586-93187605 | MS.gene68729:CDS | 35.0% |
| !! | TTTCAGGTTTGGTCAATTTG+CGG | - | chr3.2:93187729-93187748 | None:intergenic | 35.0% |
| !! | TTTTCAAGATGACCCATTTC+AGG | - | chr3.2:93187745-93187764 | None:intergenic | 35.0% |
| AACTAGAAGGGAATGCAAAG+AGG | - | chr3.2:93187935-93187954 | None:intergenic | 40.0% | |
| ACTAGAAGGGAATGCAAAGA+GGG | - | chr3.2:93187934-93187953 | None:intergenic | 40.0% | |
| ATGGGTCATCTTGAAAAGGT+TGG | + | chr3.2:93187748-93187767 | MS.gene68729:CDS | 40.0% | |
| GTAAGCCTGGTAATCTTCTA+CGG | + | chr3.2:93188231-93188250 | MS.gene68729:CDS | 40.0% | |
| GTTCTTGCCAACAATCTTAG+CGG | - | chr3.2:93188264-93188283 | None:intergenic | 40.0% | |
| TTCTTGCCAACAATCTTAGC+GGG | - | chr3.2:93188263-93188282 | None:intergenic | 40.0% | |
| TTTCGTCTTCAATCCGTTGA+TGG | + | chr3.2:93187799-93187818 | MS.gene68729:CDS | 40.0% | |
| ! | TTTGAAACCGACAACAGTGA+CGG | - | chr3.2:93187623-93187642 | None:intergenic | 40.0% |
| !! | AAGATGACCCATTTCAGGTT+TGG | - | chr3.2:93187740-93187759 | None:intergenic | 40.0% |
| !! | ACTGTTGTCGGTTTCAAAGA+AGG | + | chr3.2:93187625-93187644 | MS.gene68729:CDS | 40.0% |
| !! | TCAAATACAAGGCGCTGATT+AGG | - | chr3.2:93187832-93187851 | None:intergenic | 40.0% |
| AAAAGAGGACCAATGAGCCA+TGG | + | chr3.2:93188032-93188051 | MS.gene68729:CDS | 45.0% | |
| AAAGAAGATGCCTGGTAGGA+TGG | + | chr3.2:93188121-93188140 | MS.gene68729:CDS | 45.0% | |
| AACTCCTGAAGATGTCGCAT+AGG | - | chr3.2:93187781-93187800 | None:intergenic | 45.0% | |
| AAGAAGATGCCTGGTAGGAT+GGG | + | chr3.2:93188122-93188141 | MS.gene68729:CDS | 45.0% | |
| AGAAGATTACCAGGCTTACC+AGG | - | chr3.2:93188230-93188249 | None:intergenic | 45.0% | |
| CACAGACAACTTGGATCCAT+TGG | + | chr3.2:93188065-93188084 | MS.gene68729:CDS | 45.0% | |
| CATTCCTATGCGACATCTTC+AGG | + | chr3.2:93187774-93187793 | MS.gene68729:CDS | 45.0% | |
| CTGAAGATGTCGCATAGGAA+TGG | - | chr3.2:93187776-93187795 | None:intergenic | 45.0% | |
| GAACAACTTCACCGTTAGGT+TGG | - | chr3.2:93187600-93187619 | None:intergenic | 45.0% | |
| GCTATCCGTAGAAGATTACC+AGG | - | chr3.2:93188239-93188258 | None:intergenic | 45.0% | |
| GGTGATCTTGTTGATGTCTC+TGG | + | chr3.2:93187868-93187887 | MS.gene68729:CDS | 45.0% | |
| GGTGGTGAAAATGAGCTTAG+AGG | + | chr3.2:93187528-93187547 | MS.gene68729:CDS | 45.0% | |
| GTGAAAATGAGCTTAGAGGC+TGG | + | chr3.2:93187532-93187551 | MS.gene68729:CDS | 45.0% | |
| TACAAGGGAAAGAAGATGCC+TGG | + | chr3.2:93188113-93188132 | MS.gene68729:CDS | 45.0% | |
| TCCAAGAGTCACAGACAACT+TGG | + | chr3.2:93188056-93188075 | MS.gene68729:CDS | 45.0% | |
| TCCAAGTTGTCTGTGACTCT+TGG | - | chr3.2:93188060-93188079 | None:intergenic | 45.0% | |
| TCTTGCCAACAATCTTAGCG+GGG | - | chr3.2:93188262-93188281 | None:intergenic | 45.0% | |
| TTGAAACCGACAACAGTGAC+GGG | - | chr3.2:93187622-93187641 | None:intergenic | 45.0% | |
| ! | AAGCTTTCTGGTCTTCCTGT+TGG | - | chr3.2:93188153-93188172 | None:intergenic | 45.0% |
| !! | ATGATCAAAGGTGCTCTTCC+TGG | + | chr3.2:93188209-93188228 | MS.gene68729:CDS | 45.0% |
| !! | GGTGTGATGGGTACCAAATT+GGG | + | chr3.2:93187559-93187578 | MS.gene68729:CDS | 45.0% |
| !! | TGGTGTGATGGGTACCAAAT+TGG | + | chr3.2:93187558-93187577 | MS.gene68729:CDS | 45.0% |
| ACACCTGGTCGCGTATACAA+GGG | + | chr3.2:93188098-93188117 | MS.gene68729:CDS | 50.0% | |
| ACCTTGAAAACCCTTGCCGA+TGG | - | chr3.2:93187899-93187918 | None:intergenic | 50.0% | |
| ACGGGAACAACTTCACCGTT+AGG | - | chr3.2:93187604-93187623 | None:intergenic | 50.0% | |
| AGGGAAAGAAGATGCCTGGT+AGG | + | chr3.2:93188117-93188136 | MS.gene68729:CDS | 50.0% | |
| ATAGCCCCCGCTAAGATTGT+TGG | + | chr3.2:93188254-93188273 | MS.gene68729:CDS | 50.0% | |
| ATGAGCTTAGAGGCTGGTGT+TGG | + | chr3.2:93187538-93187557 | MS.gene68729:CDS | 50.0% | |
| ATTTGCGGTCTCTAACCCTC+CGG | - | chr3.2:93187714-93187733 | None:intergenic | 50.0% | |
| CAACTTGGATCCATTGGTGC+CGG | + | chr3.2:93188071-93188090 | MS.gene68729:CDS | 50.0% | |
| CTCTTGGAACCATGGCTCAT+TGG | - | chr3.2:93188044-93188063 | None:intergenic | 50.0% | |
| CTTGCCAACAATCTTAGCGG+GGG | - | chr3.2:93188261-93188280 | None:intergenic | 50.0% | |
| GTCTGTGACTCTTGGAACCA+TGG | - | chr3.2:93188052-93188071 | None:intergenic | 50.0% | |
| GTTGTTCCCGTCACTGTTGT+CGG | + | chr3.2:93187613-93187632 | MS.gene68729:CDS | 50.0% | |
| TAACCCTCCGGTAACCAACT+TGG | - | chr3.2:93187702-93187721 | None:intergenic | 50.0% | |
| TACACCTGGTCGCGTATACA+AGG | + | chr3.2:93188097-93188116 | MS.gene68729:CDS | 50.0% | |
| TTGAAAACCCTTGCCGATGG+TGG | - | chr3.2:93187896-93187915 | None:intergenic | 50.0% | |
| TTTCCCTTGTATACGCGACC+AGG | - | chr3.2:93188104-93188123 | None:intergenic | 50.0% | |
| ! | ACCATCGGCAAGGGTTTTCA+AGG | + | chr3.2:93187895-93187914 | MS.gene68729:CDS | 50.0% |
| AAGATGCCTGGTAGGATGGG+TGG | + | chr3.2:93188125-93188144 | MS.gene68729:CDS | 55.0% | |
| AGGTGTAGTTCCGGCACCAA+TGG | - | chr3.2:93188084-93188103 | None:intergenic | 55.0% | |
| ATCAAAACCGACGCCACCGA+CGG | + | chr3.2:93187664-93187683 | MS.gene68729:CDS | 55.0% | |
| CCTCCGGTAACCAACTTGGA+CGG | - | chr3.2:93187698-93187717 | None:intergenic | 55.0% | |
| GATGTCTCTGGCACCACCAT+CGG | + | chr3.2:93187880-93187899 | MS.gene68729:CDS | 55.0% | |
| GGTTACAACGCCGTCCAAGT+TGG | + | chr3.2:93187685-93187704 | MS.gene68729:CDS | 55.0% | |
| GTAGGATGGGTGGAACCAAC+AGG | + | chr3.2:93188135-93188154 | MS.gene68729:CDS | 55.0% | |
| TACGCGACCAGGTGTAGTTC+CGG | - | chr3.2:93188093-93188112 | None:intergenic | 55.0% | |
| TTGGACGGCGTTGTAACCGT+CGG | - | chr3.2:93187683-93187702 | None:intergenic | 55.0% | |
| TTGGTTCCACCCATCCTACC+AGG | - | chr3.2:93188134-93188153 | None:intergenic | 55.0% | |
| !! | ACGCCGTCCAAGTTGGTTAC+CGG | + | chr3.2:93187692-93187711 | MS.gene68729:CDS | 55.0% |
| !! | AGAGGCTGGTGTTGGTGTGA+TGG | + | chr3.2:93187546-93187565 | MS.gene68729:CDS | 55.0% |
| !! | ATTGGTGCCGGAACTACACC+TGG | + | chr3.2:93188083-93188102 | MS.gene68729:CDS | 55.0% |
| !! | CGTCCAAGTTGGTTACCGGA+GGG | + | chr3.2:93187696-93187715 | MS.gene68729:CDS | 55.0% |
| !! | GAGGCTGGTGTTGGTGTGAT+GGG | + | chr3.2:93187547-93187566 | MS.gene68729:CDS | 55.0% |
| GGTGCTCTTCCTGGTAAGCC+TGG | + | chr3.2:93188218-93188237 | MS.gene68729:CDS | 60.0% | |
| GTTGTAACCGTCGGTGGCGT+CGG | - | chr3.2:93187674-93187693 | None:intergenic | 60.0% | |
| TCTGGCACCACCATCGGCAA+GGG | + | chr3.2:93187886-93187905 | MS.gene68729:CDS | 60.0% | |
| !! | CCGTCCAAGTTGGTTACCGG+AGG | + | chr3.2:93187695-93187714 | MS.gene68729:CDS | 60.0% |
| CTCTGGCACCACCATCGGCA+AGG | + | chr3.2:93187885-93187904 | MS.gene68729:CDS | 65.0% | |
| GACGGCGTTGTAACCGTCGG+TGG | - | chr3.2:93187680-93187699 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 93187526 | 93188298 | 93187526 | ID=MS.gene68729 |
| chr3.2 | mRNA | 93187526 | 93188298 | 93187526 | ID=MS.gene68729.t1;Parent=MS.gene68729 |
| chr3.2 | exon | 93187526 | 93187916 | 93187526 | ID=MS.gene68729.t1.exon1;Parent=MS.gene68729.t1 |
| chr3.2 | CDS | 93187526 | 93187916 | 93187526 | ID=cds.MS.gene68729.t1;Parent=MS.gene68729.t1 |
| chr3.2 | exon | 93188009 | 93188298 | 93188009 | ID=MS.gene68729.t1.exon2;Parent=MS.gene68729.t1 |
| chr3.2 | CDS | 93188009 | 93188298 | 93188009 | ID=cds.MS.gene68729.t1;Parent=MS.gene68729.t1 |
| Gene Sequence |
| Protein sequence |
