Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1126530 | XP_013450274.1 | 91.641 | 323 | 25 | 1 | 1 | 323 | 1 | 321 | 0.0 | 608 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1126530 | sp|Q9FG13|CXE15_ARATH | 58.104 | 327 | 126 | 6 | 1 | 318 | 1 | 325 | 1.71e-121 | 355 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1126530 | A0A072U3J9 | 91.641 | 323 | 25 | 1 | 1 | 323 | 1 | 321 | 0.0 | 608 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0011010 | Msa1126530 | 0.826658 | 2.404311e-54 | -8.615850e-47 |
Msa0011040 | Msa1126530 | 0.822200 | 2.690311e-53 | -8.615850e-47 |
Msa0024650 | Msa1126530 | 0.835438 | 1.678092e-56 | -8.615850e-47 |
Msa0025570 | Msa1126530 | 0.807500 | 4.903834e-50 | -8.615850e-47 |
Msa0036550 | Msa1126530 | 0.866886 | 2.053585e-65 | -8.615850e-47 |
Msa0038750 | Msa1126530 | -0.801508 | 8.710950e-49 | -8.615850e-47 |
Msa0042210 | Msa1126530 | -0.817407 | 3.350518e-52 | -8.615850e-47 |
Msa0042240 | Msa1126530 | -0.812054 | 5.140684e-51 | -8.615850e-47 |
Msa0043840 | Msa1126530 | 0.801203 | 1.005885e-48 | -8.615850e-47 |
Msa0046430 | Msa1126530 | 0.811165 | 8.023151e-51 | -8.615850e-47 |
Msa0048380 | Msa1126530 | 0.827016 | 1.974018e-54 | -8.615850e-47 |
Msa0062190 | Msa1126530 | 0.813479 | 2.507576e-51 | -8.615850e-47 |
Msa0063540 | Msa1126530 | 0.806414 | 8.322117e-50 | -8.615850e-47 |
Msa0072180 | Msa1126530 | 0.829021 | 6.496363e-55 | -8.615850e-47 |
Msa0073110 | Msa1126530 | 0.804936 | 1.700479e-49 | -8.615850e-47 |
Msa0075830 | Msa1126530 | -0.817000 | 4.137552e-52 | -8.615850e-47 |
Msa0080100 | Msa1126530 | -0.804033 | 2.622937e-49 | -8.615850e-47 |
Msa0084390 | Msa1126530 | 0.817611 | 3.013741e-52 | -8.615850e-47 |
Msa0088800 | Msa1126530 | 0.805321 | 1.412217e-49 | -8.615850e-47 |
Msa0090500 | Msa1126530 | 0.807885 | 4.061434e-50 | -8.615850e-47 |
Msa0106540 | Msa1126530 | 0.819236 | 1.291312e-52 | -8.615850e-47 |
Msa0107830 | Msa1126530 | 0.813086 | 3.058485e-51 | -8.615850e-47 |
Msa0117650 | Msa1126530 | 0.808990 | 2.360887e-50 | -8.615850e-47 |
Msa0120450 | Msa1126530 | 0.836900 | 7.133813e-57 | -8.615850e-47 |
Msa0603310 | Msa1126530 | 0.805080 | 1.586690e-49 | -8.615850e-47 |
Msa0614960 | Msa1126530 | 0.815867 | 7.418372e-52 | -8.615850e-47 |
Msa0628200 | Msa1126530 | 0.810765 | 9.793792e-51 | -8.615850e-47 |
Msa0629160 | Msa1126530 | 0.824604 | 7.378286e-54 | -8.615850e-47 |
Msa0634900 | Msa1126530 | -0.812077 | 5.082513e-51 | -8.615850e-47 |
Msa0644220 | Msa1126530 | -0.813473 | 2.515081e-51 | -8.615850e-47 |
Msa0647300 | Msa1126530 | 0.800535 | 1.377357e-48 | -8.615850e-47 |
Msa0655370 | Msa1126530 | 0.821536 | 3.833349e-53 | -8.615850e-47 |
Msa0699170 | Msa1126530 | 0.824579 | 7.477788e-54 | -8.615850e-47 |
Msa0718770 | Msa1126530 | 0.824304 | 8.679771e-54 | -8.615850e-47 |
Msa0758150 | Msa1126530 | 0.804880 | 1.746713e-49 | -8.615850e-47 |
Msa0758990 | Msa1126530 | 0.822458 | 2.344023e-53 | -8.615850e-47 |
Msa0792410 | Msa1126530 | 0.810848 | 9.397046e-51 | -8.615850e-47 |
Msa0800120 | Msa1126530 | 0.828766 | 7.490580e-55 | -8.615850e-47 |
Msa0800150 | Msa1126530 | 0.812952 | 3.272713e-51 | -8.615850e-47 |
Msa0802600 | Msa1126530 | 0.815772 | 7.788607e-52 | -8.615850e-47 |
Msa0803560 | Msa1126530 | 0.810804 | 9.605143e-51 | -8.615850e-47 |
Msa0827770 | Msa1126530 | 0.811879 | 5.614375e-51 | -8.615850e-47 |
Msa0827800 | Msa1126530 | 0.803744 | 3.011828e-49 | -8.615850e-47 |
Msa0838210 | Msa1126530 | 0.855024 | 8.323032e-62 | -8.615850e-47 |
Msa0121320 | Msa1126530 | 0.817279 | 3.580033e-52 | -8.615850e-47 |
Msa0122170 | Msa1126530 | -0.806887 | 6.613353e-50 | -8.615850e-47 |
Msa0125600 | Msa1126530 | 0.829504 | 4.962005e-55 | -8.615850e-47 |
Msa0130710 | Msa1126530 | 0.859204 | 4.860423e-63 | -8.615850e-47 |
Msa0136090 | Msa1126530 | 0.802888 | 4.529955e-49 | -8.615850e-47 |
Msa0137970 | Msa1126530 | 0.807549 | 4.786879e-50 | -8.615850e-47 |
Msa0163690 | Msa1126530 | 0.834499 | 2.892598e-56 | -8.615850e-47 |
Msa0166180 | Msa1126530 | 0.814686 | 1.357985e-51 | -8.615850e-47 |
Msa0176600 | Msa1126530 | 0.849259 | 3.628120e-60 | -8.615850e-47 |
Msa0180380 | Msa1126530 | 0.814435 | 1.543027e-51 | -8.615850e-47 |
Msa0211460 | Msa1126530 | 0.809547 | 1.793074e-50 | -8.615850e-47 |
Msa0370620 | Msa1126530 | 0.810385 | 1.183675e-50 | -8.615850e-47 |
Msa0388690 | Msa1126530 | 0.943131 | 2.091086e-102 | -8.615850e-47 |
Msa0390200 | Msa1126530 | 0.801373 | 9.282834e-49 | -8.615850e-47 |
Msa0430040 | Msa1126530 | -0.800410 | 1.459938e-48 | -8.615850e-47 |
Msa0444210 | Msa1126530 | 0.817094 | 3.941202e-52 | -8.615850e-47 |
Msa0448310 | Msa1126530 | 0.812474 | 4.162411e-51 | -8.615850e-47 |
Msa0454770 | Msa1126530 | 0.813748 | 2.187983e-51 | -8.615850e-47 |
Msa0464310 | Msa1126530 | 0.806272 | 8.913898e-50 | -8.615850e-47 |
Msa0987550 | Msa1126530 | 0.803439 | 3.484133e-49 | -8.615850e-47 |
Msa1019220 | Msa1126530 | 0.811104 | 8.271551e-51 | -8.615850e-47 |
Msa1024480 | Msa1126530 | 0.820101 | 8.193410e-53 | -8.615850e-47 |
Msa1029860 | Msa1126530 | 0.831002 | 2.136351e-55 | -8.615850e-47 |
Msa1031060 | Msa1126530 | 0.816232 | 6.150430e-52 | -8.615850e-47 |
Msa1042300 | Msa1126530 | 0.807952 | 3.931667e-50 | -8.615850e-47 |
Msa1047300 | Msa1126530 | 0.825778 | 3.894311e-54 | -8.615850e-47 |
Msa1047340 | Msa1126530 | 0.827182 | 1.801618e-54 | -8.615850e-47 |
Msa1048390 | Msa1126530 | 0.800129 | 1.666032e-48 | -8.615850e-47 |
Msa1062060 | Msa1126530 | 0.801751 | 7.768034e-49 | -8.615850e-47 |
Msa1062290 | Msa1126530 | 0.830160 | 3.432945e-55 | -8.615850e-47 |
Msa1068730 | Msa1126530 | 0.818658 | 1.747005e-52 | -8.615850e-47 |
Msa1076280 | Msa1126530 | 0.813950 | 1.974862e-51 | -8.615850e-47 |
Msa1081170 | Msa1126530 | 0.894912 | 1.577912e-75 | -8.615850e-47 |
Msa1084800 | Msa1126530 | 0.800610 | 1.329598e-48 | -8.615850e-47 |
Msa1100330 | Msa1126530 | 0.804543 | 2.054374e-49 | -8.615850e-47 |
Msa1103450 | Msa1126530 | 0.825326 | 4.982141e-54 | -8.615850e-47 |
Msa1104130 | Msa1126530 | 0.818820 | 1.605174e-52 | -8.615850e-47 |
Msa0258910 | Msa1126530 | 0.811588 | 6.494757e-51 | -8.615850e-47 |
Msa0264230 | Msa1126530 | 0.803357 | 3.623666e-49 | -8.615850e-47 |
Msa0264710 | Msa1126530 | 0.807709 | 4.427715e-50 | -8.615850e-47 |
Msa0269240 | Msa1126530 | 0.831982 | 1.225866e-55 | -8.615850e-47 |
Msa0279810 | Msa1126530 | 0.824342 | 8.500748e-54 | -8.615850e-47 |
Msa0287630 | Msa1126530 | 0.802357 | 5.828947e-49 | -8.615850e-47 |
Msa0302750 | Msa1126530 | 0.801446 | 8.969387e-49 | -8.615850e-47 |
Msa0307630 | Msa1126530 | 0.809257 | 2.068738e-50 | -8.615850e-47 |
Msa0319220 | Msa1126530 | 0.840277 | 9.581636e-58 | -8.615850e-47 |
Msa0349910 | Msa1126530 | 0.809588 | 1.756583e-50 | -8.615850e-47 |
Msa0354600 | Msa1126530 | 0.827747 | 1.318980e-54 | -8.615850e-47 |
Msa0356240 | Msa1126530 | 0.805888 | 1.073970e-49 | -8.615850e-47 |
Msa0356270 | Msa1126530 | 0.814314 | 1.640771e-51 | -8.615850e-47 |
Msa1107520 | Msa1126530 | 0.814443 | 1.536697e-51 | -8.615850e-47 |
Msa1108560 | Msa1126530 | 0.809762 | 1.611997e-50 | -8.615850e-47 |
Msa1108610 | Msa1126530 | 0.817092 | 3.945070e-52 | -8.615850e-47 |
Msa1119670 | Msa1126530 | 0.821618 | 3.669322e-53 | -8.615850e-47 |
Msa1126460 | Msa1126530 | 0.916238 | 2.265998e-85 | -8.615850e-47 |
Msa1126530 | Msa1131300 | -0.800056 | 1.723756e-48 | -8.615850e-47 |
Msa1126530 | Msa1156670 | 0.802462 | 5.547357e-49 | -8.615850e-47 |
Msa1126530 | Msa1160540 | 0.820045 | 8.440535e-53 | -8.615850e-47 |
Msa1126530 | Msa1179190 | 0.816007 | 6.902760e-52 | -8.615850e-47 |
Msa1126530 | Msa1184680 | 0.812221 | 4.727562e-51 | -8.615850e-47 |
Msa1126530 | Msa1203650 | 0.803270 | 3.776989e-49 | -8.615850e-47 |
Msa1126530 | Msa1215540 | -0.847163 | 1.376115e-59 | -8.615850e-47 |
Msa1126530 | Msa1223540 | 0.832203 | 1.080581e-55 | -8.615850e-47 |
Msa1126530 | Msa1223620 | 0.819252 | 1.280587e-52 | -8.615850e-47 |
Msa1126530 | Msa1223710 | 0.811022 | 8.618996e-51 | -8.615850e-47 |
Msa1126530 | Msa1223960 | 0.840706 | 7.399165e-58 | -8.615850e-47 |
Msa1126530 | Msa1223990 | 0.852274 | 5.141682e-61 | -8.615850e-47 |
Msa1126530 | Msa1225560 | 0.806208 | 9.196675e-50 | -8.615850e-47 |
Msa1126530 | Msa1259570 | 0.805747 | 1.149794e-49 | -8.615850e-47 |
Msa1126530 | Msa1263110 | 0.862424 | 5.117513e-64 | -8.615850e-47 |
Msa1126530 | Msa1263120 | 0.831959 | 1.241934e-55 | -8.615850e-47 |
Msa1126530 | Msa1263370 | 0.800475 | 1.416598e-48 | -8.615850e-47 |
Msa1126530 | Msa1263520 | 0.818557 | 1.841609e-52 | -8.615850e-47 |
Msa1126530 | Msa1268360 | 0.835572 | 1.551628e-56 | -8.615850e-47 |
Msa1126530 | Msa1273320 | 0.818503 | 1.894579e-52 | -8.615850e-47 |
Msa1126530 | Msa1280330 | 0.807144 | 5.834119e-50 | -8.615850e-47 |
Msa1126530 | Msa1280360 | 0.804601 | 1.997736e-49 | -8.615850e-47 |
Msa1126530 | Msa1302630 | 0.801969 | 7.005132e-49 | -8.615850e-47 |
Msa1126530 | Msa1338510 | 0.803703 | 3.071108e-49 | -8.615850e-47 |
Msa1126530 | Msa1357840 | 0.800856 | 1.184358e-48 | -8.615850e-47 |
Msa1126530 | Msa1361980 | 0.802074 | 6.666944e-49 | -8.615850e-47 |
Msa1126530 | Msa1362910 | 0.812508 | 4.092748e-51 | -8.615850e-47 |
Msa1126530 | Msa1364690 | 0.801468 | 8.877083e-49 | -8.615850e-47 |
Msa1126530 | Msa1378950 | 0.808718 | 2.698212e-50 | -8.615850e-47 |
Msa1126530 | Msa1387480 | 0.831796 | 1.362286e-55 | -8.615850e-47 |
Msa1126530 | Msa1395720 | 0.867544 | 1.265673e-65 | -8.615850e-47 |
Msa1126530 | Msa1404810 | -0.826042 | 3.370706e-54 | -8.615850e-47 |
Msa1126530 | Msa1405040 | -0.813134 | 2.984912e-51 | -8.615850e-47 |
Msa1126530 | Msa1405830 | 0.816719 | 4.784759e-52 | -8.615850e-47 |
Msa1126530 | Msa1407810 | 0.801203 | 1.006029e-48 | -8.615850e-47 |
Msa1126530 | Msa1417220 | 0.802844 | 4.626605e-49 | -8.615850e-47 |
Msa1126530 | Msa1437590 | 0.801003 | 1.104980e-48 | -8.615850e-47 |
Msa1126530 | Msa1437780 | 0.802695 | 4.966695e-49 | -8.615850e-47 |
Msa1126530 | Msa1441300 | 0.805536 | 1.273438e-49 | -8.615850e-47 |
Msa1126530 | Msa1441450 | 0.831650 | 1.480306e-55 | -8.615850e-47 |
Msa1126530 | Msa1458270 | 0.853206 | 2.785668e-61 | -8.615850e-47 |
Msa1126530 | Msa1461660 | 0.800452 | 1.431590e-48 | -8.615850e-47 |
Msa1126530 | Msa1462610 | 0.810218 | 1.285687e-50 | -8.615850e-47 |
Msa0487110 | Msa1126530 | 0.808479 | 3.034659e-50 | -8.615850e-47 |
Msa0492330 | Msa1126530 | -0.802116 | 6.535742e-49 | -8.615850e-47 |
Msa0524710 | Msa1126530 | 0.801713 | 7.909408e-49 | -8.615850e-47 |
Msa0538440 | Msa1126530 | 0.811579 | 6.524007e-51 | -8.615850e-47 |
Msa0538520 | Msa1126530 | 0.801320 | 9.519280e-49 | -8.615850e-47 |
Msa0540640 | Msa1126530 | 0.822151 | 2.761619e-53 | -8.615850e-47 |
Msa0550800 | Msa1126530 | -0.804533 | 2.063449e-49 | -8.615850e-47 |
Msa0561830 | Msa1126530 | 0.816190 | 6.282023e-52 | -8.615850e-47 |
Msa0567570 | Msa1126530 | 0.811057 | 8.468825e-51 | -8.615850e-47 |
Msa0587730 | Msa1126530 | 0.813491 | 2.492295e-51 | -8.615850e-47 |
Msa0886370 | Msa1126530 | 0.800164 | 1.638409e-48 | -8.615850e-47 |
Msa0910590 | Msa1126530 | 0.810636 | 1.044365e-50 | -8.615850e-47 |
Msa0913500 | Msa1126530 | 0.810121 | 1.349165e-50 | -8.615850e-47 |
Msa0932930 | Msa1126530 | 0.812588 | 3.930799e-51 | -8.615850e-47 |
Msa0948430 | Msa1126530 | 0.807390 | 5.174592e-50 | -8.615850e-47 |
Msa0970820 | Msa1126530 | 0.812575 | 3.956200e-51 | -8.615850e-47 |
Msa0973010 | Msa1126530 | -0.810724 | 9.998635e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1126530 | MtrunA17_Chr7g0268091 | 91.641 | 323 | 25 | 1 | 1 | 323 | 1 | 321 | 0.0 | 608 |
Msa1126530 | MtrunA17_Chr4g0025291 | 57.188 | 313 | 131 | 3 | 7 | 318 | 5 | 315 | 6.73e-129 | 370 |
Msa1126530 | MtrunA17_Chr7g0214851 | 34.743 | 331 | 187 | 11 | 13 | 320 | 27 | 351 | 8.94e-61 | 197 |
Msa1126530 | MtrunA17_Chr1g0210121 | 35.866 | 329 | 182 | 10 | 7 | 318 | 26 | 342 | 2.73e-59 | 194 |
Msa1126530 | MtrunA17_Chr3g0081521 | 34.405 | 311 | 181 | 7 | 7 | 298 | 7 | 313 | 1.39e-57 | 189 |
Msa1126530 | MtrunA17_Chr1g0204211 | 38.144 | 291 | 163 | 7 | 20 | 302 | 43 | 324 | 9.21e-53 | 176 |
Msa1126530 | MtrunA17_Chr8g0351201 | 35.294 | 323 | 197 | 9 | 3 | 318 | 7 | 324 | 1.01e-50 | 171 |
Msa1126530 | MtrunA17_Chr7g0235741 | 35.220 | 318 | 189 | 9 | 7 | 318 | 40 | 346 | 5.60e-50 | 169 |
Msa1126530 | MtrunA17_Chr3g0133701 | 31.529 | 314 | 193 | 7 | 14 | 318 | 14 | 314 | 1.88e-48 | 164 |
Msa1126530 | MtrunA17_Chr1g0149271 | 34.657 | 277 | 171 | 6 | 7 | 282 | 3 | 270 | 2.59e-47 | 161 |
Msa1126530 | MtrunA17_Chr1g0204201 | 34.062 | 320 | 186 | 9 | 15 | 320 | 19 | 327 | 4.56e-47 | 161 |
Msa1126530 | MtrunA17_Chr6g0474411 | 33.010 | 309 | 189 | 9 | 19 | 318 | 27 | 326 | 7.51e-47 | 160 |
Msa1126530 | MtrunA17_Chr8g0351211 | 34.056 | 323 | 185 | 10 | 15 | 321 | 9 | 319 | 1.38e-46 | 160 |
Msa1126530 | MtrunA17_Chr4g0045181 | 33.333 | 318 | 198 | 8 | 7 | 318 | 8 | 317 | 4.33e-46 | 159 |
Msa1126530 | MtrunA17_Chr6g0474491 | 34.731 | 334 | 186 | 13 | 3 | 318 | 5 | 324 | 4.73e-46 | 159 |
Msa1126530 | MtrunA17_Chr6g0474471 | 36.149 | 296 | 154 | 10 | 41 | 318 | 47 | 325 | 1.65e-44 | 154 |
Msa1126530 | MtrunA17_Chr6g0474541 | 39.565 | 230 | 130 | 5 | 15 | 241 | 48 | 271 | 3.81e-44 | 154 |
Msa1126530 | MtrunA17_Chr1g0205871 | 33.228 | 316 | 194 | 11 | 14 | 319 | 15 | 323 | 4.42e-44 | 153 |
Msa1126530 | MtrunA17_Chr5g0394251 | 29.630 | 324 | 214 | 8 | 7 | 320 | 13 | 332 | 9.90e-44 | 152 |
Msa1126530 | MtrunA17_Chr4g0045131 | 30.476 | 315 | 208 | 6 | 7 | 318 | 48 | 354 | 1.02e-43 | 153 |
Msa1126530 | MtrunA17_Chr3g0095711 | 31.173 | 324 | 207 | 8 | 7 | 320 | 53 | 370 | 4.20e-43 | 152 |
Msa1126530 | MtrunA17_Chr8g0351171 | 32.075 | 318 | 192 | 11 | 15 | 319 | 12 | 318 | 5.72e-42 | 147 |
Msa1126530 | MtrunA17_Chr6g0474631 | 33.681 | 288 | 164 | 9 | 19 | 292 | 25 | 299 | 2.13e-41 | 146 |
Msa1126530 | MtrunA17_Chr5g0394241 | 30.514 | 331 | 216 | 8 | 1 | 320 | 1 | 328 | 2.37e-41 | 146 |
Msa1126530 | MtrunA17_Chr6g0477231 | 30.769 | 299 | 180 | 6 | 39 | 322 | 53 | 339 | 3.22e-41 | 146 |
Msa1126530 | MtrunA17_Chr6g0477271 | 31.690 | 284 | 182 | 5 | 39 | 320 | 80 | 353 | 5.62e-41 | 146 |
Msa1126530 | MtrunA17_Chr6g0477161 | 31.959 | 291 | 175 | 6 | 39 | 318 | 56 | 334 | 7.10e-41 | 151 |
Msa1126530 | MtrunA17_Chr6g0477161 | 30.100 | 299 | 185 | 6 | 36 | 322 | 401 | 687 | 1.88e-38 | 144 |
Msa1126530 | MtrunA17_Chr1g0196311 | 37.826 | 230 | 128 | 4 | 71 | 298 | 121 | 337 | 7.15e-41 | 146 |
Msa1126530 | MtrunA17_Chr8g0353951 | 30.625 | 320 | 211 | 7 | 7 | 320 | 16 | 330 | 8.50e-41 | 145 |
Msa1126530 | MtrunA17_Chr1g0191301 | 33.449 | 287 | 161 | 8 | 45 | 314 | 67 | 340 | 9.52e-41 | 145 |
Msa1126530 | MtrunA17_Chr6g0477251 | 29.970 | 337 | 201 | 8 | 4 | 318 | 10 | 333 | 2.03e-40 | 150 |
Msa1126530 | MtrunA17_Chr6g0477251 | 30.205 | 341 | 203 | 8 | 4 | 322 | 564 | 891 | 2.43e-40 | 150 |
Msa1126530 | MtrunA17_Chr4g0045121 | 31.752 | 274 | 178 | 5 | 10 | 282 | 14 | 279 | 7.62e-39 | 139 |
Msa1126530 | MtrunA17_Chr7g0259161 | 37.069 | 232 | 132 | 6 | 71 | 298 | 106 | 327 | 1.70e-38 | 139 |
Msa1126530 | MtrunA17_Chr7g0233871 | 30.284 | 317 | 215 | 5 | 6 | 318 | 11 | 325 | 5.10e-36 | 132 |
Msa1126530 | MtrunA17_Chr5g0394211 | 29.664 | 327 | 206 | 10 | 7 | 319 | 43 | 359 | 4.69e-35 | 130 |
Msa1126530 | MtrunA17_Chr4g0045191 | 27.922 | 308 | 189 | 8 | 18 | 321 | 29 | 307 | 1.46e-32 | 123 |
Msa1126530 | MtrunA17_Chr1g0205781 | 29.653 | 317 | 214 | 6 | 6 | 318 | 11 | 322 | 3.29e-31 | 119 |
Msa1126530 | MtrunA17_Chr6g0458881 | 31.429 | 280 | 148 | 9 | 59 | 301 | 146 | 418 | 4.52e-31 | 121 |
Msa1126530 | MtrunA17_Chr1g0205791 | 30.462 | 325 | 205 | 9 | 6 | 322 | 9 | 320 | 1.10e-30 | 119 |
Msa1126530 | MtrunA17_Chr7g0228721 | 31.359 | 287 | 148 | 8 | 57 | 301 | 152 | 431 | 1.72e-30 | 120 |
Msa1126530 | MtrunA17_Chr6g0477241 | 31.313 | 198 | 114 | 5 | 39 | 225 | 66 | 252 | 7.81e-27 | 107 |
Msa1126530 | MtrunA17_Chr6g0474611 | 30.216 | 139 | 87 | 4 | 156 | 285 | 3 | 140 | 6.34e-13 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1126530 | AT5G06570.1 | 58.104 | 327 | 126 | 6 | 1 | 318 | 1 | 325 | 1.74e-122 | 355 |
Msa1126530 | AT5G06570.2 | 58.104 | 327 | 126 | 6 | 1 | 318 | 1 | 325 | 1.74e-122 | 355 |
Msa1126530 | AT5G06570.3 | 58.104 | 327 | 126 | 6 | 1 | 318 | 16 | 340 | 2.15e-122 | 355 |
Msa1126530 | AT5G06570.4 | 58.104 | 327 | 126 | 6 | 1 | 318 | 16 | 340 | 2.15e-122 | 355 |
Msa1126530 | AT5G16080.1 | 36.859 | 312 | 183 | 6 | 7 | 312 | 28 | 331 | 1.15e-60 | 197 |
Msa1126530 | AT5G62180.1 | 36.741 | 313 | 178 | 9 | 3 | 301 | 2 | 308 | 1.52e-51 | 173 |
Msa1126530 | AT2G45600.1 | 35.202 | 321 | 180 | 11 | 15 | 323 | 16 | 320 | 3.19e-49 | 167 |
Msa1126530 | AT2G45610.1 | 37.247 | 247 | 149 | 4 | 44 | 286 | 49 | 293 | 2.11e-47 | 162 |
Msa1126530 | AT1G68620.1 | 34.122 | 296 | 177 | 7 | 7 | 297 | 23 | 305 | 1.68e-46 | 160 |
Msa1126530 | AT5G23530.1 | 33.775 | 302 | 178 | 9 | 20 | 313 | 35 | 322 | 3.75e-43 | 152 |
Msa1126530 | AT5G27320.1 | 35.401 | 274 | 149 | 7 | 39 | 298 | 61 | 320 | 2.13e-42 | 150 |
Msa1126530 | AT1G47480.1 | 28.616 | 318 | 209 | 7 | 10 | 323 | 11 | 314 | 2.63e-42 | 149 |
Msa1126530 | AT1G19190.1 | 30.476 | 315 | 202 | 8 | 15 | 322 | 13 | 317 | 7.01e-42 | 148 |
Msa1126530 | AT3G63010.1 | 33.835 | 266 | 147 | 5 | 49 | 298 | 70 | 322 | 3.47e-40 | 144 |
Msa1126530 | AT3G05120.1 | 33.457 | 269 | 151 | 6 | 45 | 298 | 67 | 322 | 4.49e-40 | 144 |
Msa1126530 | AT3G48690.1 | 30.094 | 319 | 213 | 8 | 7 | 318 | 5 | 320 | 8.09e-37 | 134 |
Msa1126530 | AT3G48700.1 | 28.395 | 324 | 217 | 7 | 7 | 318 | 5 | 325 | 7.19e-36 | 132 |
Msa1126530 | AT1G49640.1 | 28.037 | 321 | 211 | 10 | 7 | 319 | 6 | 314 | 1.34e-34 | 129 |
Msa1126530 | AT2G03550.1 | 29.167 | 312 | 201 | 9 | 14 | 318 | 12 | 310 | 1.74e-33 | 125 |
Msa1126530 | AT1G49650.1 | 31.769 | 277 | 171 | 9 | 14 | 282 | 68 | 334 | 2.25e-32 | 124 |
Msa1126530 | AT5G14310.1 | 29.965 | 287 | 159 | 6 | 59 | 308 | 140 | 421 | 1.05e-30 | 120 |
Msa1126530 | AT3G27320.2 | 31.095 | 283 | 151 | 7 | 57 | 301 | 120 | 396 | 8.73e-30 | 118 |
Msa1126530 | AT3G27320.1 | 31.095 | 283 | 151 | 7 | 57 | 301 | 152 | 428 | 1.57e-29 | 117 |
Msa1126530 | AT1G49660.1 | 28.674 | 279 | 186 | 9 | 7 | 279 | 5 | 276 | 2.39e-29 | 114 |
Find 103 sgRNAs with CRISPR-Local
Find 207 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTGAAGCATGAACTGTTTA+AGG | 0.092720 | 7_3:+78092601 | None:intergenic |
TAAAGCAGTTTGTAGGATTA+AGG | 0.197493 | 7_3:-78092485 | Msa1126530:three_prime_UTR |
TCATACAACAATTGTGAATA+TGG | 0.214269 | 7_3:+78095269 | None:intergenic |
AATGAAGCTTGATCCCATTT+TGG | 0.221227 | 7_3:-78092787 | Msa1126530:CDS |
ACATAACCTCTTATTCTTAC+AGG | 0.242199 | 7_3:+78094986 | None:intergenic |
GCCACCAACTATCACCAAAA+TGG | 0.244462 | 7_3:+78092773 | None:intergenic |
TTTATTATGGGCGACTCTTC+TGG | 0.255612 | 7_3:-78095067 | Msa1126530:CDS |
AGCTTCATTTGTTCAAGATT+TGG | 0.259469 | 7_3:+78092801 | None:intergenic |
CTTTGACAGTGTGTTTATTA+TGG | 0.269266 | 7_3:-78095080 | Msa1126530:CDS |
TAATTTACTTGTGATAATAT+TGG | 0.272921 | 7_3:+78092563 | None:intergenic |
CCAGTGATTGTGTTCCTTCA+TGG | 0.273519 | 7_3:-78095325 | Msa1126530:CDS |
TCAAGATTCAATGTTTGTTC+TGG | 0.294664 | 7_3:+78094908 | None:intergenic |
ATACAATAATATATATATAA+TGG | 0.296982 | 7_3:-78095557 | Msa1126530:exon |
TGGAGGACCTTCCTCAGATT+TGG | 0.297434 | 7_3:+78094928 | None:intergenic |
CCTATATTAAAGCAGTTTGT+AGG | 0.313778 | 7_3:-78092492 | Msa1126530:three_prime_UTR |
CACCAGCTCGCGGTTCGGTT+TGG | 0.326565 | 7_3:-78095031 | Msa1126530:CDS |
GATAAATAAGTCATTGTTAT+CGG | 0.332075 | 7_3:-78092461 | Msa1126530:three_prime_UTR |
TTCTTGTTGTTGATGTTGTT+TGG | 0.341111 | 7_3:+78095358 | None:intergenic |
CATCCATTGGCGAATCCATT+TGG | 0.361125 | 7_3:-78092834 | Msa1126530:CDS |
TACAATAATATATATATAAT+GGG | 0.370171 | 7_3:-78095556 | Msa1126530:exon |
CCTACAAACTGCTTTAATAT+AGG | 0.374093 | 7_3:+78092492 | None:intergenic |
TTTGACAGTGTGTTTATTAT+GGG | 0.375770 | 7_3:-78095079 | Msa1126530:CDS |
ACTGAGTTGTCTTCTATTGT+GGG | 0.382901 | 7_3:+78095439 | None:intergenic |
TTTGTTTCGGCTCCCGTACA+TGG | 0.389708 | 7_3:-78095294 | Msa1126530:CDS |
GCAATGAATTGCTTAAAGAT+AGG | 0.394694 | 7_3:-78092752 | Msa1126530:CDS |
CAGGGGTTGAGCCATGGTTA+TGG | 0.420795 | 7_3:-78095130 | Msa1126530:CDS |
CATACAACAATTGTGAATAT+GGG | 0.426547 | 7_3:+78095270 | None:intergenic |
GAAGTTGTTAGAACGGCAAA+TGG | 0.428164 | 7_3:+78095474 | None:intergenic |
TGTGAGGTGGCTTCAAAGGC+AGG | 0.428633 | 7_3:-78095149 | Msa1126530:CDS |
ATTGAACCTGTAAGAATAAG+AGG | 0.436336 | 7_3:-78094992 | Msa1126530:CDS |
AAGTCATTGTTATCGGTTTG+TGG | 0.438463 | 7_3:-78092454 | Msa1126530:three_prime_UTR |
TACTGAGTTGTCTTCTATTG+TGG | 0.438893 | 7_3:+78095438 | None:intergenic |
CATTAAATACATTGAGTTTG+AGG | 0.440998 | 7_3:-78092688 | Msa1126530:CDS |
TGCAAATTCGAAAGAAATGA+TGG | 0.442186 | 7_3:+78095604 | None:intergenic |
GTGAATATGGGGCCATGTAC+GGG | 0.442379 | 7_3:+78095282 | None:intergenic |
GTCGAAAAGACAGTCTTTGA+AGG | 0.443728 | 7_3:+78095414 | None:intergenic |
GCAACAAGGTTGAAAGGAAT+AGG | 0.450448 | 7_3:-78092717 | Msa1126530:CDS |
CCACCAACTATCACCAAAAT+GGG | 0.451123 | 7_3:+78092774 | None:intergenic |
TGTGAATATGGGGCCATGTA+CGG | 0.460692 | 7_3:+78095281 | None:intergenic |
TTGCTCACCAGCTCGCGGTT+CGG | 0.462960 | 7_3:-78095036 | Msa1126530:CDS |
ATTAAATACATTGAGTTTGA+GGG | 0.463910 | 7_3:-78092687 | Msa1126530:CDS |
ATATTCAGAAACTGCAAAAG+AGG | 0.479398 | 7_3:-78092634 | Msa1126530:CDS |
TCTGGTGCAAGCCGGTAGTC+CGG | 0.481494 | 7_3:+78095211 | None:intergenic |
TTTGGACTTCCATGTCCAAA+TGG | 0.481522 | 7_3:+78092819 | None:intergenic |
GCTCGCGGTTCGGTTTGGAT+TGG | 0.481933 | 7_3:-78095026 | Msa1126530:CDS |
AACCGTCGTTATAGAGTTGA+AGG | 0.492510 | 7_3:+78095497 | None:intergenic |
GCAGCTGGAAGACGGTGCTC+TGG | 0.503385 | 7_3:+78095193 | None:intergenic |
GAAATTTGAAGTTGTTAGAA+CGG | 0.506659 | 7_3:+78095467 | None:intergenic |
AGATTCAATGTTTGTTCTGG+AGG | 0.507064 | 7_3:+78094911 | None:intergenic |
TGATCTCTACTCTCTCCAAC+AGG | 0.510331 | 7_3:+78092855 | None:intergenic |
TGGTGGTTGCACCGGACTAC+CGG | 0.511979 | 7_3:-78095222 | Msa1126530:CDS |
AAGCTGTGAGGTGGCTTCAA+AGG | 0.513473 | 7_3:-78095153 | Msa1126530:CDS |
TCAAGCACTGGTGGTTGCAC+CGG | 0.513886 | 7_3:-78095230 | Msa1126530:CDS |
TGAGGTGGCTTCAAAGGCAG+GGG | 0.515102 | 7_3:-78095147 | Msa1126530:CDS |
GAGTTTGAGGGGTGTGAACA+TGG | 0.521959 | 7_3:-78092675 | Msa1126530:CDS |
CCATGAAGGAACACAATCAC+TGG | 0.524194 | 7_3:+78095325 | None:intergenic |
AACTATGCAACAAGGTTGAA+AGG | 0.532635 | 7_3:-78092723 | Msa1126530:CDS |
ACAGCATCATCAATTGCAGC+TGG | 0.532717 | 7_3:+78095178 | None:intergenic |
ATTGTGTTCCTTCATGGTGG+AGG | 0.533059 | 7_3:-78095319 | Msa1126530:CDS |
CAATGAATTGCTTAAAGATA+GGG | 0.536108 | 7_3:-78092751 | Msa1126530:CDS |
AATCCTCTACTACGTGGGGA+AGG | 0.539422 | 7_3:+78095530 | None:intergenic |
GACGGTGCTCTGGTGCAAGC+CGG | 0.547439 | 7_3:+78095203 | None:intergenic |
CGCTGGACTTCAAGCACTGG+TGG | 0.553404 | 7_3:-78095239 | Msa1126530:CDS |
TTCCCTTCCCCACGTAGTAG+AGG | 0.554411 | 7_3:-78095533 | Msa1126530:CDS |
TGAATCTTGACTTACTAGAC+AGG | 0.555572 | 7_3:-78094895 | Msa1126530:intron |
CAAAGGCAGGGGTTGAGCCA+TGG | 0.559944 | 7_3:-78095136 | Msa1126530:CDS |
ATCCAAACCGAACCGCGAGC+TGG | 0.561333 | 7_3:+78095029 | None:intergenic |
TGTCCAAATGGATTCGCCAA+TGG | 0.564040 | 7_3:+78092831 | None:intergenic |
TTCCTTCAACTCTATAACGA+CGG | 0.566776 | 7_3:-78095499 | Msa1126530:CDS |
GTGAGGTGGCTTCAAAGGCA+GGG | 0.568163 | 7_3:-78095148 | Msa1126530:CDS |
CATCAATTGCAGCTGGAAGA+CGG | 0.570423 | 7_3:+78095185 | None:intergenic |
AACAAAAGCCTCCACCATGA+AGG | 0.573822 | 7_3:+78095311 | None:intergenic |
ATTATGGGCGACTCTTCTGG+CGG | 0.575291 | 7_3:-78095064 | Msa1126530:CDS |
AGTTTGAGGGGTGTGAACAT+GGG | 0.575990 | 7_3:-78092674 | Msa1126530:CDS |
CCACGTAGTAGAGGATTGCA+TGG | 0.583298 | 7_3:-78095524 | Msa1126530:CDS |
TTATGGGCGACTCTTCTGGC+GGG | 0.583356 | 7_3:-78095063 | Msa1126530:CDS |
ATCCTCTACTACGTGGGGAA+GGG | 0.583978 | 7_3:+78095531 | None:intergenic |
AGCCGCTGGACTTCAAGCAC+TGG | 0.585205 | 7_3:-78095242 | Msa1126530:CDS |
ACTGTCAAAGTCAACATCAC+TGG | 0.588550 | 7_3:+78095093 | None:intergenic |
CATGCAATCCTCTACTACGT+GGG | 0.592592 | 7_3:+78095525 | None:intergenic |
TGTTGTATGAGTCTAGCCGC+TGG | 0.594495 | 7_3:-78095256 | Msa1126530:CDS |
TTAAATACATTGAGTTTGAG+GGG | 0.597234 | 7_3:-78092686 | Msa1126530:CDS |
TCGGTTTGGATTGGATCGAA+CGG | 0.608973 | 7_3:-78095017 | Msa1126530:CDS |
TGGAGGTTGTCAATGCCTGT+TGG | 0.608993 | 7_3:-78092870 | Msa1126530:CDS |
TTGGCGAATCCATTTGGACA+TGG | 0.609677 | 7_3:-78092828 | Msa1126530:CDS |
ATGCTGTCGAAGCTGTGAGG+TGG | 0.615332 | 7_3:-78095162 | Msa1126530:CDS |
ATACAACAATTGTGAATATG+GGG | 0.617658 | 7_3:+78095271 | None:intergenic |
AGAGAGTAGAGATCATCCAT+TGG | 0.627428 | 7_3:-78092847 | Msa1126530:CDS |
CACCAGTGCTTGAAGTCCAG+CGG | 0.635664 | 7_3:+78095240 | None:intergenic |
GCCATGGTTATGGAGAGCCA+TGG | 0.645828 | 7_3:-78095120 | Msa1126530:CDS |
GTGATTGTGTTCCTTCATGG+TGG | 0.647455 | 7_3:-78095322 | Msa1126530:CDS |
ATGCAATCCTCTACTACGTG+GGG | 0.648507 | 7_3:+78095526 | None:intergenic |
CCATGCAATCCTCTACTACG+TGG | 0.649967 | 7_3:+78095524 | None:intergenic |
CACGTAGTAGAGGATTGCAT+GGG | 0.651059 | 7_3:-78095523 | Msa1126530:CDS |
TTCGAAAGAAATGATGGACG+AGG | 0.651243 | 7_3:+78095610 | None:intergenic |
GGAAGTACGGACCAAATCTG+AGG | 0.652219 | 7_3:-78094939 | Msa1126530:CDS |
GTACGGACCAAATCTGAGGA+AGG | 0.656456 | 7_3:-78094935 | Msa1126530:CDS |
GAATATTGCTCACCAGCTCG+CGG | 0.656723 | 7_3:-78095041 | Msa1126530:CDS |
ATTTGCAAATCAAACACACA+AGG | 0.661356 | 7_3:-78095582 | Msa1126530:five_prime_UTR |
TCAACATCACTGGTCAACCA+TGG | 0.667320 | 7_3:+78095103 | None:intergenic |
ACCATGGCTCTCCATAACCA+TGG | 0.673171 | 7_3:+78095119 | None:intergenic |
GGGCTGCAAACTATGCAACA+AGG | 0.691008 | 7_3:-78092731 | Msa1126530:CDS |
ATGATGCTGTCGAAGCTGTG+AGG | 0.759020 | 7_3:-78095165 | Msa1126530:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTATTATTATTATTATAAA+GGG | + | chr7_3:78094820-78094839 | None:intergenic | 0.0% |
!! | TATTATTATTATTATTATAA+AGG | + | chr7_3:78094821-78094840 | None:intergenic | 0.0% |
!!! | AATTAGAATCAATTATTTTA+GGG | + | chr7_3:78093107-78093126 | None:intergenic | 10.0% |
!!! | AAATTAGAATCAATTATTTT+AGG | + | chr7_3:78093108-78093127 | None:intergenic | 10.0% |
!! | TATATATATATATATATCAG+AGG | + | chr7_3:78093395-78093414 | None:intergenic | 10.0% |
!! | AAAATATTATTATCTCTAAT+CGG | - | chr7_3:78094427-78094446 | Msa1126530:intron | 10.0% |
!! | AAAAAAATATTAAAATAGCA+AGG | - | chr7_3:78094722-78094741 | Msa1126530:intron | 10.0% |
!! | AAAAAATATTAAAATAGCAA+GGG | - | chr7_3:78094723-78094742 | Msa1126530:intron | 10.0% |
!!! | ATATTTTGTTCTAAAATGTT+TGG | - | chr7_3:78093208-78093227 | Msa1126530:intron | 15.0% |
!!! | TAAAAGAATCATTCATTTTT+AGG | + | chr7_3:78093336-78093355 | None:intergenic | 15.0% |
!! | ACAATATTACAATACAAATT+TGG | - | chr7_3:78093938-78093957 | Msa1126530:intron | 15.0% |
!!! | AACTTTTTCTTATAGTAATA+AGG | - | chr7_3:78094200-78094219 | Msa1126530:intron | 15.0% |
!!! | GATTAGAGATAATAATATTT+TGG | + | chr7_3:78094428-78094447 | None:intergenic | 15.0% |
!!! | TTTTAATCTTTAACAACTTT+AGG | - | chr7_3:78094537-78094556 | Msa1126530:intron | 15.0% |
!! | TAATTTACTTGTGATAATAT+TGG | + | chr7_3:78095381-78095400 | None:intergenic | 15.0% |
!! | TTTAATATAGGCTAAAAATA+TGG | + | chr7_3:78095440-78095459 | None:intergenic | 15.0% |
!!! | AGAATTTCTCATCTAATTTT+CGG | - | chr7_3:78093162-78093181 | Msa1126530:intron | 20.0% |
!! | AGTTCAACGAATAAATAATT+TGG | + | chr7_3:78093287-78093306 | None:intergenic | 20.0% |
!! | TATCTTTCACTTTGTATTTA+TGG | - | chr7_3:78093513-78093532 | Msa1126530:intron | 20.0% |
!!! | AATTTTGCACTTTTTTTTAG+AGG | - | chr7_3:78093581-78093600 | Msa1126530:intron | 20.0% |
!! | TGTAAAATAGTCAAATGAAT+TGG | - | chr7_3:78093627-78093646 | Msa1126530:intron | 20.0% |
!!! | TTCATTATTTTCAAAGAAGT+TGG | + | chr7_3:78093777-78093796 | None:intergenic | 20.0% |
!!! | GTCAATTGTTTCTTATAATA+AGG | + | chr7_3:78094098-78094117 | None:intergenic | 20.0% |
!!! | TAAGAAACAATTGACTTTTT+TGG | - | chr7_3:78094103-78094122 | Msa1126530:intron | 20.0% |
!!! | TAAGAAAAAGTTGACTTTTT+AGG | + | chr7_3:78094192-78094211 | None:intergenic | 20.0% |
!! | ACATAAAGTCAACTAAATAT+TGG | + | chr7_3:78094280-78094299 | None:intergenic | 20.0% |
!! | AGTTGTTAAAGATTAAAAGA+GGG | + | chr7_3:78094535-78094554 | None:intergenic | 20.0% |
!! | AAGTTGTTAAAGATTAAAAG+AGG | + | chr7_3:78094536-78094555 | None:intergenic | 20.0% |
!! | TTAGCACATATATGTAAAAT+TGG | + | chr7_3:78095010-78095029 | None:intergenic | 20.0% |
!!! | ATTTCCAATTTTTCAGATTT+TGG | - | chr7_3:78095051-78095070 | Msa1126530:CDS | 20.0% |
!! | ATTAAATACATTGAGTTTGA+GGG | - | chr7_3:78095254-78095273 | Msa1126530:CDS | 20.0% |
!! | GATAAATAAGTCATTGTTAT+CGG | - | chr7_3:78095480-78095499 | Msa1126530:CDS | 20.0% |
!!! | AATTTTAGTAATTTGTGTTG+TGG | - | chr7_3:78095538-78095557 | Msa1126530:CDS | 20.0% |
!! | GAAATTTGAAGTTGTTAGAA+CGG | + | chr7_3:78092477-78092496 | None:intergenic | 25.0% |
! | ATACAACAATTGTGAATATG+GGG | + | chr7_3:78092673-78092692 | None:intergenic | 25.0% |
! | CATACAACAATTGTGAATAT+GGG | + | chr7_3:78092674-78092693 | None:intergenic | 25.0% |
! | TCATACAACAATTGTGAATA+TGG | + | chr7_3:78092675-78092694 | None:intergenic | 25.0% |
! | TTTGACAGTGTGTTTATTAT+GGG | - | chr7_3:78092862-78092881 | Msa1126530:CDS | 25.0% |
!! | AATAAGAGGTTATGTTTTGT+TGG | - | chr7_3:78092963-78092982 | Msa1126530:intron | 25.0% |
! | AGAGCTTGAATTTGATATAT+AGG | + | chr7_3:78093264-78093283 | None:intergenic | 25.0% |
!! | CTTTGAAAATAATGAAGCAT+TGG | - | chr7_3:78093781-78093800 | Msa1126530:intron | 25.0% |
! | ACGACATTCTTTATTATACT+TGG | + | chr7_3:78093976-78093995 | None:intergenic | 25.0% |
! | TGTCATGGAAATTGAATATT+TGG | + | chr7_3:78094059-78094078 | None:intergenic | 25.0% |
!! | TTGTTTCTTATAATAAGGAC+CGG | + | chr7_3:78094093-78094112 | None:intergenic | 25.0% |
! | TTTCTTATAGTAATAAGGAC+CGG | - | chr7_3:78094205-78094224 | Msa1126530:intron | 25.0% |
!!! | CTTGCTAACAAGTTTTTTTA+AGG | + | chr7_3:78094403-78094422 | None:intergenic | 25.0% |
!! | GATGGTTCTTATTTAAAGTT+AGG | - | chr7_3:78094465-78094484 | Msa1126530:intron | 25.0% |
! | TAATCTTTAACAACTTTAGG+TGG | - | chr7_3:78094540-78094559 | Msa1126530:intron | 25.0% |
! | ACTTGTGGTTCATTAAATTA+TGG | - | chr7_3:78094597-78094616 | Msa1126530:intron | 25.0% |
!!! | TCATCAACTTTTTCCAATAT+AGG | - | chr7_3:78094640-78094659 | Msa1126530:intron | 25.0% |
!! | TACTATTAGTTTGAAAGCAA+TGG | + | chr7_3:78094669-78094688 | None:intergenic | 25.0% |
! | ATTGCTTTCAAACTAATAGT+AGG | - | chr7_3:78094668-78094687 | Msa1126530:intron | 25.0% |
! | TACAAGTAATATTTACCACA+TGG | + | chr7_3:78094697-78094716 | None:intergenic | 25.0% |
! | AAGATTGAAAATCTTTACAC+TGG | + | chr7_3:78094778-78094797 | None:intergenic | 25.0% |
! | TTATAAAGGGTTCTATGATT+TGG | + | chr7_3:78094807-78094826 | None:intergenic | 25.0% |
! | CAATGAATTGCTTAAAGATA+GGG | - | chr7_3:78095190-78095209 | Msa1126530:CDS | 25.0% |
! | CATTAAATACATTGAGTTTG+AGG | - | chr7_3:78095253-78095272 | Msa1126530:CDS | 25.0% |
! | TTAAATACATTGAGTTTGAG+GGG | - | chr7_3:78095255-78095274 | Msa1126530:CDS | 25.0% |
TGCAAATTCGAAAGAAATGA+TGG | + | chr7_3:78092340-78092359 | None:intergenic | 30.0% | |
ATTTGCAAATCAAACACACA+AGG | - | chr7_3:78092359-78092378 | Msa1126530:three_prime_UTR | 30.0% | |
!! | TTCTTGTTGTTGATGTTGTT+TGG | + | chr7_3:78092586-78092605 | None:intergenic | 30.0% |
CTTTGACAGTGTGTTTATTA+TGG | - | chr7_3:78092861-78092880 | Msa1126530:CDS | 30.0% | |
ATTGAACCTGTAAGAATAAG+AGG | - | chr7_3:78092949-78092968 | Msa1126530:intron | 30.0% | |
ACATAACCTCTTATTCTTAC+AGG | + | chr7_3:78092958-78092977 | None:intergenic | 30.0% | |
TCAAGATTCAATGTTTGTTC+TGG | + | chr7_3:78093036-78093055 | None:intergenic | 30.0% | |
GAGCCACATTATAATATTGT+GGG | + | chr7_3:78093688-78093707 | None:intergenic | 30.0% | |
AGAGCCACATTATAATATTG+TGG | + | chr7_3:78093689-78093708 | None:intergenic | 30.0% | |
CAAAACTAAAACAAGTGAAG+TGG | + | chr7_3:78093877-78093896 | None:intergenic | 30.0% | |
!!! | CACTTCACTTGTTTTAGTTT+TGG | - | chr7_3:78093875-78093894 | Msa1126530:intron | 30.0% |
!!! | TTTTAGTTTTGGCCTTATCT+GGG | - | chr7_3:78093886-78093905 | Msa1126530:intron | 30.0% |
TCTCTAATCGGACAATATTA+TGG | - | chr7_3:78094439-78094458 | Msa1126530:intron | 30.0% | |
AAAGCAATGGAAACCTATAT+TGG | + | chr7_3:78094656-78094675 | None:intergenic | 30.0% | |
!!! | GTACGTGTAGCATTTTTTTT+AGG | + | chr7_3:78094753-78094772 | None:intergenic | 30.0% |
!! | TCCAATTTTTCAGATTTTGG+AGG | - | chr7_3:78095054-78095073 | Msa1126530:CDS | 30.0% |
ACCTCCAAAATCTGAAAAAT+TGG | + | chr7_3:78095058-78095077 | None:intergenic | 30.0% | |
AGCTTCATTTGTTCAAGATT+TGG | + | chr7_3:78095143-78095162 | None:intergenic | 30.0% | |
GCAATGAATTGCTTAAAGAT+AGG | - | chr7_3:78095189-78095208 | Msa1126530:CDS | 30.0% | |
ATATTCAGAAACTGCAAAAG+AGG | - | chr7_3:78095307-78095326 | Msa1126530:CDS | 30.0% | |
! | TTTGAAGCATGAACTGTTTA+AGG | + | chr7_3:78095343-78095362 | None:intergenic | 30.0% |
CCTACAAACTGCTTTAATAT+AGG | + | chr7_3:78095452-78095471 | None:intergenic | 30.0% | |
CCTATATTAAAGCAGTTTGT+AGG | - | chr7_3:78095449-78095468 | Msa1126530:CDS | 30.0% | |
TAAAGCAGTTTGTAGGATTA+AGG | - | chr7_3:78095456-78095475 | Msa1126530:CDS | 30.0% | |
TTCCTTCAACTCTATAACGA+CGG | - | chr7_3:78092442-78092461 | Msa1126530:three_prime_UTR | 35.0% | |
ACTGAGTTGTCTTCTATTGT+GGG | + | chr7_3:78092505-78092524 | None:intergenic | 35.0% | |
TACTGAGTTGTCTTCTATTG+TGG | + | chr7_3:78092506-78092525 | None:intergenic | 35.0% | |
AGATTCAATGTTTGTTCTGG+AGG | + | chr7_3:78093033-78093052 | None:intergenic | 35.0% | |
TGAATCTTGACTTACTAGAC+AGG | - | chr7_3:78093046-78093065 | Msa1126530:intron | 35.0% | |
CGGTAGAATCATGAATTGAA+TGG | - | chr7_3:78093182-78093201 | Msa1126530:intron | 35.0% | |
AATACTTACCTCGTTCATTC+TGG | - | chr7_3:78093450-78093469 | Msa1126530:intron | 35.0% | |
CCACATTATAATATTGTGGG+TGG | + | chr7_3:78093685-78093704 | None:intergenic | 35.0% | |
CCACCCACAATATTATAATG+TGG | - | chr7_3:78093682-78093701 | Msa1126530:intron | 35.0% | |
!!! | TGTGGCTCTTTTTTTACAGT+AGG | - | chr7_3:78093700-78093719 | Msa1126530:intron | 35.0% |
CATTGGTATCCAAAGTTATC+TGG | - | chr7_3:78093798-78093817 | Msa1126530:intron | 35.0% | |
CATTTAATTACCTACGTCCA+TGG | + | chr7_3:78093837-78093856 | None:intergenic | 35.0% | |
CATGGACGTAGGTAATTAAA+TGG | - | chr7_3:78093835-78093854 | Msa1126530:intron | 35.0% | |
TGAAGTGGTTGTGTTTATTG+GGG | + | chr7_3:78093862-78093881 | None:intergenic | 35.0% | |
GTGAAGTGGTTGTGTTTATT+GGG | + | chr7_3:78093863-78093882 | None:intergenic | 35.0% | |
AGTGAAGTGGTTGTGTTTAT+TGG | + | chr7_3:78093864-78093883 | None:intergenic | 35.0% | |
!!! | GTTTTAGTTTTGGCCTTATC+TGG | - | chr7_3:78093885-78093904 | Msa1126530:intron | 35.0% |
TTCTTATAATAAGGACCGGA+GGG | + | chr7_3:78094089-78094108 | None:intergenic | 35.0% | |
TTTCTTATAATAAGGACCGG+AGG | + | chr7_3:78094090-78094109 | None:intergenic | 35.0% | |
TTATAGTAATAAGGACCGGA+GGG | - | chr7_3:78094209-78094228 | Msa1126530:intron | 35.0% | |
CGGACAATATTATGGAATGA+TGG | - | chr7_3:78094447-78094466 | Msa1126530:intron | 35.0% | |
ACTAATAGTAGGTTTCCATG+TGG | - | chr7_3:78094679-78094698 | Msa1126530:intron | 35.0% | |
! | AATGAAGCTTGATCCCATTT+TGG | - | chr7_3:78095154-78095173 | Msa1126530:CDS | 35.0% |
AACTATGCAACAAGGTTGAA+AGG | - | chr7_3:78095218-78095237 | Msa1126530:CDS | 35.0% | |
!! | AAGTCATTGTTATCGGTTTG+TGG | - | chr7_3:78095487-78095506 | Msa1126530:CDS | 35.0% |
!!! | TATCGGTTTGTGGTTTTTAG+TGG | - | chr7_3:78095497-78095516 | Msa1126530:CDS | 35.0% |
!! | TTCGAAAGAAATGATGGACG+AGG | + | chr7_3:78092334-78092353 | None:intergenic | 40.0% |
AACCGTCGTTATAGAGTTGA+AGG | + | chr7_3:78092447-78092466 | None:intergenic | 40.0% | |
GAAGTTGTTAGAACGGCAAA+TGG | + | chr7_3:78092470-78092489 | None:intergenic | 40.0% | |
GTCGAAAAGACAGTCTTTGA+AGG | + | chr7_3:78092530-78092549 | None:intergenic | 40.0% | |
ACTGTCAAAGTCAACATCAC+TGG | + | chr7_3:78092851-78092870 | None:intergenic | 40.0% | |
TTTATTATGGGCGACTCTTC+TGG | - | chr7_3:78092874-78092893 | Msa1126530:CDS | 40.0% | |
TGAACAAACCAGAATGAACG+AGG | + | chr7_3:78093461-78093480 | None:intergenic | 40.0% | |
TTGTGGGTGGAAATTGTGAA+CGG | + | chr7_3:78093672-78093691 | None:intergenic | 40.0% | |
TATCCAAAGTTATCTGGCCA+AGG | - | chr7_3:78093804-78093823 | Msa1126530:intron | 40.0% | |
CTTATAGTAATAAGGACCGG+AGG | - | chr7_3:78094208-78094227 | Msa1126530:intron | 40.0% | |
! | TTTTCACCTAATACTCCCTC+CGG | + | chr7_3:78094227-78094246 | None:intergenic | 40.0% |
AGAGAGTAGAGATCATCCAT+TGG | - | chr7_3:78095094-78095113 | Msa1126530:CDS | 40.0% | |
TTTGGACTTCCATGTCCAAA+TGG | + | chr7_3:78095125-78095144 | None:intergenic | 40.0% | |
!! | GATCCCATTTTGGTGATAGT+TGG | - | chr7_3:78095164-78095183 | Msa1126530:CDS | 40.0% |
CCACCAACTATCACCAAAAT+GGG | + | chr7_3:78095170-78095189 | None:intergenic | 40.0% | |
GCAACAAGGTTGAAAGGAAT+AGG | - | chr7_3:78095224-78095243 | Msa1126530:CDS | 40.0% | |
ATGCAATCCTCTACTACGTG+GGG | + | chr7_3:78092418-78092437 | None:intergenic | 45.0% | |
CATGCAATCCTCTACTACGT+GGG | + | chr7_3:78092419-78092438 | None:intergenic | 45.0% | |
CACGTAGTAGAGGATTGCAT+GGG | - | chr7_3:78092418-78092437 | Msa1126530:three_prime_UTR | 45.0% | |
CCATGAAGGAACACAATCAC+TGG | + | chr7_3:78092619-78092638 | None:intergenic | 45.0% | |
CCAGTGATTGTGTTCCTTCA+TGG | - | chr7_3:78092616-78092635 | Msa1126530:CDS | 45.0% | |
GTGATTGTGTTCCTTCATGG+TGG | - | chr7_3:78092619-78092638 | Msa1126530:CDS | 45.0% | |
ATTGTGTTCCTTCATGGTGG+AGG | - | chr7_3:78092622-78092641 | Msa1126530:CDS | 45.0% | |
AACAAAAGCCTCCACCATGA+AGG | + | chr7_3:78092633-78092652 | None:intergenic | 45.0% | |
!! | CATGGTGGAGGCTTTTGTTT+CGG | - | chr7_3:78092634-78092653 | Msa1126530:CDS | 45.0% |
TGTGAATATGGGGCCATGTA+CGG | + | chr7_3:78092663-78092682 | None:intergenic | 45.0% | |
CATCAATTGCAGCTGGAAGA+CGG | + | chr7_3:78092759-78092778 | None:intergenic | 45.0% | |
ACAGCATCATCAATTGCAGC+TGG | + | chr7_3:78092766-78092785 | None:intergenic | 45.0% | |
TCAACATCACTGGTCAACCA+TGG | + | chr7_3:78092841-78092860 | None:intergenic | 45.0% | |
!! | TCGGTTTGGATTGGATCGAA+CGG | - | chr7_3:78092924-78092943 | Msa1126530:intron | 45.0% |
!!! | GTTTTGTTGGCGCCGTTTTT+TGG | - | chr7_3:78092976-78092995 | Msa1126530:intron | 45.0% |
CTTGACTTACTAGACAGGTG+AGG | - | chr7_3:78093051-78093070 | Msa1126530:intron | 45.0% | |
TTACCTACGTCCATGGCTAT+TGG | + | chr7_3:78093830-78093849 | None:intergenic | 45.0% | |
! | AACAACTTTAGGTGGTGCCA+TGG | - | chr7_3:78094548-78094567 | Msa1126530:intron | 45.0% |
GCGACATCATGAGAAACTTG+TGG | - | chr7_3:78094582-78094601 | Msa1126530:intron | 45.0% | |
TGATCTCTACTCTCTCCAAC+AGG | + | chr7_3:78095089-78095108 | None:intergenic | 45.0% | |
CATCCATTGGCGAATCCATT+TGG | - | chr7_3:78095107-78095126 | Msa1126530:CDS | 45.0% | |
! | TGTCCAAATGGATTCGCCAA+TGG | + | chr7_3:78095113-78095132 | None:intergenic | 45.0% |
TTGGCGAATCCATTTGGACA+TGG | - | chr7_3:78095113-78095132 | Msa1126530:CDS | 45.0% | |
!! | CCCATTTTGGTGATAGTTGG+TGG | - | chr7_3:78095167-78095186 | Msa1126530:CDS | 45.0% |
GCCACCAACTATCACCAAAA+TGG | + | chr7_3:78095171-78095190 | None:intergenic | 45.0% | |
! | AGTTTGAGGGGTGTGAACAT+GGG | - | chr7_3:78095267-78095286 | Msa1126530:CDS | 45.0% |
!! | ATACAATAATATATATATAA+TGG | - | chr7_3:78092384-78092403 | Msa1126530:three_prime_UTR | 5.0% |
!! | TACAATAATATATATATAAT+GGG | - | chr7_3:78092385-78092404 | Msa1126530:three_prime_UTR | 5.0% |
ATCCTCTACTACGTGGGGAA+GGG | + | chr7_3:78092413-78092432 | None:intergenic | 50.0% | |
AATCCTCTACTACGTGGGGA+AGG | + | chr7_3:78092414-78092433 | None:intergenic | 50.0% | |
CCATGCAATCCTCTACTACG+TGG | + | chr7_3:78092420-78092439 | None:intergenic | 50.0% | |
CCACGTAGTAGAGGATTGCA+TGG | - | chr7_3:78092417-78092436 | Msa1126530:three_prime_UTR | 50.0% | |
TTTGTTTCGGCTCCCGTACA+TGG | - | chr7_3:78092647-78092666 | Msa1126530:CDS | 50.0% | |
GTGAATATGGGGCCATGTAC+GGG | + | chr7_3:78092662-78092681 | None:intergenic | 50.0% | |
TGTTGTATGAGTCTAGCCGC+TGG | - | chr7_3:78092685-78092704 | Msa1126530:CDS | 50.0% | |
ATGATGCTGTCGAAGCTGTG+AGG | - | chr7_3:78092776-78092795 | Msa1126530:CDS | 50.0% | |
AAGCTGTGAGGTGGCTTCAA+AGG | - | chr7_3:78092788-78092807 | Msa1126530:CDS | 50.0% | |
ACCATGGCTCTCCATAACCA+TGG | + | chr7_3:78092825-78092844 | None:intergenic | 50.0% | |
ATTATGGGCGACTCTTCTGG+CGG | - | chr7_3:78092877-78092896 | Msa1126530:CDS | 50.0% | |
GAATATTGCTCACCAGCTCG+CGG | - | chr7_3:78092900-78092919 | Msa1126530:intron | 50.0% | |
!!! | TTGTTGGCGCCGTTTTTTGG+CGG | - | chr7_3:78092979-78092998 | Msa1126530:intron | 50.0% |
CGTACTTCCCCGCCAAAAAA+CGG | + | chr7_3:78092991-78093010 | None:intergenic | 50.0% | |
!!! | CGTTTTTTGGCGGGGAAGTA+CGG | - | chr7_3:78092989-78093008 | Msa1126530:intron | 50.0% |
! | GGAAGTACGGACCAAATCTG+AGG | - | chr7_3:78093002-78093021 | Msa1126530:intron | 50.0% |
GTACGGACCAAATCTGAGGA+AGG | - | chr7_3:78093006-78093025 | Msa1126530:intron | 50.0% | |
TGGAGGACCTTCCTCAGATT+TGG | + | chr7_3:78093016-78093035 | None:intergenic | 50.0% | |
! | TGGCCTTGGCCAGATAACTT+TGG | + | chr7_3:78093810-78093829 | None:intergenic | 50.0% |
CCATGACATCATACTCCCTC+CGG | - | chr7_3:78094071-78094090 | Msa1126530:intron | 50.0% | |
!! | TAAGGACCGGAGGGAGTATT+AGG | - | chr7_3:78094218-78094237 | Msa1126530:intron | 50.0% |
GTTTCTCATGATGTCGCGTG+TGG | + | chr7_3:78094579-78094598 | None:intergenic | 50.0% | |
TGGAGGTTGTCAATGCCTGT+TGG | - | chr7_3:78095071-78095090 | Msa1126530:CDS | 50.0% | |
GGGCTGCAAACTATGCAACA+AGG | - | chr7_3:78095210-78095229 | Msa1126530:CDS | 50.0% | |
! | GAGTTTGAGGGGTGTGAACA+TGG | - | chr7_3:78095266-78095285 | Msa1126530:CDS | 50.0% |
TTCCCTTCCCCACGTAGTAG+AGG | - | chr7_3:78092408-78092427 | Msa1126530:three_prime_UTR | 55.0% | |
CACCAGTGCTTGAAGTCCAG+CGG | + | chr7_3:78092704-78092723 | None:intergenic | 55.0% | |
!! | TCAAGCACTGGTGGTTGCAC+CGG | - | chr7_3:78092711-78092730 | Msa1126530:CDS | 55.0% |
ATGCTGTCGAAGCTGTGAGG+TGG | - | chr7_3:78092779-78092798 | Msa1126530:CDS | 55.0% | |
TGTGAGGTGGCTTCAAAGGC+AGG | - | chr7_3:78092792-78092811 | Msa1126530:CDS | 55.0% | |
GTGAGGTGGCTTCAAAGGCA+GGG | - | chr7_3:78092793-78092812 | Msa1126530:CDS | 55.0% | |
TGAGGTGGCTTCAAAGGCAG+GGG | - | chr7_3:78092794-78092813 | Msa1126530:CDS | 55.0% | |
CAGGGGTTGAGCCATGGTTA+TGG | - | chr7_3:78092811-78092830 | Msa1126530:CDS | 55.0% | |
GCCATGGTTATGGAGAGCCA+TGG | - | chr7_3:78092821-78092840 | Msa1126530:CDS | 55.0% | |
TTATGGGCGACTCTTCTGGC+GGG | - | chr7_3:78092878-78092897 | Msa1126530:intron | 55.0% | |
!!! | TGTTGGCGCCGTTTTTTGGC+GGG | - | chr7_3:78092980-78092999 | Msa1126530:intron | 55.0% |
! | ACGTCCATGGCTATTGGCCT+TGG | + | chr7_3:78093824-78093843 | None:intergenic | 55.0% |
AGGCCAATAGCCATGGACGT+AGG | - | chr7_3:78093824-78093843 | Msa1126530:intron | 55.0% | |
GCACGTCACTCTCCCAGATA+AGG | + | chr7_3:78093901-78093920 | None:intergenic | 55.0% | |
! | CCGGAGGGAGTATGATGTCA+TGG | + | chr7_3:78094074-78094093 | None:intergenic | 55.0% |
TCTCATGATGTCGCGTGTGG+TGG | + | chr7_3:78094576-78094595 | None:intergenic | 55.0% | |
AGCCGCTGGACTTCAAGCAC+TGG | - | chr7_3:78092699-78092718 | Msa1126530:CDS | 60.0% | |
!! | CGCTGGACTTCAAGCACTGG+TGG | - | chr7_3:78092702-78092721 | Msa1126530:CDS | 60.0% |
TGGTGGTTGCACCGGACTAC+CGG | - | chr7_3:78092719-78092738 | Msa1126530:CDS | 60.0% | |
TCTGGTGCAAGCCGGTAGTC+CGG | + | chr7_3:78092733-78092752 | None:intergenic | 60.0% | |
CAAAGGCAGGGGTTGAGCCA+TGG | - | chr7_3:78092805-78092824 | Msa1126530:CDS | 60.0% | |
TTGCTCACCAGCTCGCGGTT+CGG | - | chr7_3:78092905-78092924 | Msa1126530:intron | 60.0% | |
ATCCAAACCGAACCGCGAGC+TGG | + | chr7_3:78092915-78092934 | None:intergenic | 60.0% | |
!! | GCTCGCGGTTCGGTTTGGAT+TGG | - | chr7_3:78092915-78092934 | Msa1126530:intron | 60.0% |
!!! | GTTGGCGCCGTTTTTTGGCG+GGG | - | chr7_3:78092981-78093000 | Msa1126530:intron | 60.0% |
CTGGCCAAGGCCAATAGCCA+TGG | - | chr7_3:78093817-78093836 | Msa1126530:intron | 60.0% | |
GACGGTGCTCTGGTGCAAGC+CGG | + | chr7_3:78092741-78092760 | None:intergenic | 65.0% | |
GCAGCTGGAAGACGGTGCTC+TGG | + | chr7_3:78092751-78092770 | None:intergenic | 65.0% | |
!! | CACCAGCTCGCGGTTCGGTT+TGG | - | chr7_3:78092910-78092929 | Msa1126530:intron | 65.0% |
! | TGTCGCGTGTGGTGGTGCCA+TGG | + | chr7_3:78094568-78094587 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_3 | gene | 78092330 | 78095633 | 78092330 | ID=Msa1126530;Name=Msa1126530 |
chr7_3 | mRNA | 78092330 | 78095633 | 78092330 | ID=Msa1126530-mRNA-1;Parent=Msa1126530;Name=Msa1126530-mRNA-1;_AED=0.00;_eAED=0.00;_QI=73|1|1|1|1|1|2|260|323 |
chr7_3 | exon | 78092330 | 78092896 | 78092330 | ID=Msa1126530-mRNA-1:exon:21711;Parent=Msa1126530-mRNA-1 |
chr7_3 | exon | 78094896 | 78095633 | 78094896 | ID=Msa1126530-mRNA-1:exon:21710;Parent=Msa1126530-mRNA-1 |
chr7_3 | five_prime_UTR | 78095561 | 78095633 | 78095561 | ID=Msa1126530-mRNA-1:five_prime_utr;Parent=Msa1126530-mRNA-1 |
chr7_3 | CDS | 78094896 | 78095560 | 78094896 | ID=Msa1126530-mRNA-1:cds;Parent=Msa1126530-mRNA-1 |
chr7_3 | CDS | 78092590 | 78092896 | 78092590 | ID=Msa1126530-mRNA-1:cds;Parent=Msa1126530-mRNA-1 |
chr7_3 | three_prime_UTR | 78092330 | 78092589 | 78092330 | ID=Msa1126530-mRNA-1:three_prime_utr;Parent=Msa1126530-mRNA-1 |
Gene Sequence |
Protein sequence |