Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0900110 | XP_003620634.1 | 93.750 | 208 | 13 | 0 | 1 | 208 | 1 | 208 | 1.63e-142 | 405 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0900110 | sp|O81098|RPB5A_ARATH | 56.373 | 204 | 87 | 1 | 2 | 205 | 1 | 202 | 3.79e-79 | 238 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0900110 | G7KPG3 | 93.750 | 208 | 13 | 0 | 1 | 208 | 1 | 208 | 7.79e-143 | 405 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011960 | Msa0900110 | 0.831106 | 2.014020e-55 | -8.615850e-47 |
| Msa0023000 | Msa0900110 | 0.809184 | 2.144728e-50 | -8.615850e-47 |
| Msa0027260 | Msa0900110 | 0.807801 | 4.232150e-50 | -8.615850e-47 |
| Msa0027770 | Msa0900110 | 0.809005 | 2.342717e-50 | -8.615850e-47 |
| Msa0029260 | Msa0900110 | 0.800865 | 1.179177e-48 | -8.615850e-47 |
| Msa0032260 | Msa0900110 | 0.803178 | 3.945478e-49 | -8.615850e-47 |
| Msa0032580 | Msa0900110 | 0.827935 | 1.188517e-54 | -8.615850e-47 |
| Msa0033110 | Msa0900110 | 0.824991 | 5.979242e-54 | -8.615850e-47 |
| Msa0033260 | Msa0900110 | 0.820038 | 8.469415e-53 | -8.615850e-47 |
| Msa0040690 | Msa0900110 | 0.812372 | 4.381777e-51 | -8.615850e-47 |
| Msa0043660 | Msa0900110 | 0.815850 | 7.483635e-52 | -8.615850e-47 |
| Msa0047160 | Msa0900110 | 0.838787 | 2.337049e-57 | -8.615850e-47 |
| Msa0054440 | Msa0900110 | 0.818182 | 2.240376e-52 | -8.615850e-47 |
| Msa0054480 | Msa0900110 | 0.816044 | 6.774336e-52 | -8.615850e-47 |
| Msa0058300 | Msa0900110 | 0.811378 | 7.214836e-51 | -8.615850e-47 |
| Msa0059040 | Msa0900110 | 0.817098 | 3.932384e-52 | -8.615850e-47 |
| Msa0059110 | Msa0900110 | 0.835616 | 1.512788e-56 | -8.615850e-47 |
| Msa0061080 | Msa0900110 | 0.805941 | 1.046813e-49 | -8.615850e-47 |
| Msa0063530 | Msa0900110 | 0.823608 | 1.263717e-53 | -8.615850e-47 |
| Msa0075500 | Msa0900110 | 0.828014 | 1.137666e-54 | -8.615850e-47 |
| Msa0078900 | Msa0900110 | 0.807644 | 4.570429e-50 | -8.615850e-47 |
| Msa0084380 | Msa0900110 | 0.822391 | 2.428543e-53 | -8.615850e-47 |
| Msa0089820 | Msa0900110 | 0.800953 | 1.131334e-48 | -8.615850e-47 |
| Msa0090360 | Msa0900110 | 0.810942 | 8.970338e-51 | -8.615850e-47 |
| Msa0090520 | Msa0900110 | 0.811330 | 7.387783e-51 | -8.615850e-47 |
| Msa0091410 | Msa0900110 | 0.821645 | 3.616130e-53 | -8.615850e-47 |
| Msa0091570 | Msa0900110 | 0.806908 | 6.546060e-50 | -8.615850e-47 |
| Msa0094470 | Msa0900110 | 0.845120 | 4.950730e-59 | -8.615850e-47 |
| Msa0100740 | Msa0900110 | 0.812048 | 5.157493e-51 | -8.615850e-47 |
| Msa0105620 | Msa0900110 | 0.831274 | 1.831917e-55 | -8.615850e-47 |
| Msa0112770 | Msa0900110 | 0.819630 | 1.049977e-52 | -8.615850e-47 |
| Msa0115130 | Msa0900110 | 0.800328 | 1.517416e-48 | -8.615850e-47 |
| Msa0609410 | Msa0900110 | -0.820154 | 7.969862e-53 | -8.615850e-47 |
| Msa0615490 | Msa0900110 | 0.812958 | 3.262499e-51 | -8.615850e-47 |
| Msa0617640 | Msa0900110 | 0.809488 | 1.845624e-50 | -8.615850e-47 |
| Msa0625720 | Msa0900110 | 0.804928 | 1.706688e-49 | -8.615850e-47 |
| Msa0626910 | Msa0900110 | 0.801710 | 7.919311e-49 | -8.615850e-47 |
| Msa0631350 | Msa0900110 | 0.811709 | 6.111894e-51 | -8.615850e-47 |
| Msa0634890 | Msa0900110 | 0.800143 | 1.654963e-48 | -8.615850e-47 |
| Msa0643560 | Msa0900110 | 0.824114 | 9.618003e-54 | -8.615850e-47 |
| Msa0643570 | Msa0900110 | 0.805894 | 1.070718e-49 | -8.615850e-47 |
| Msa0660490 | Msa0900110 | 0.808456 | 3.069140e-50 | -8.615850e-47 |
| Msa0663390 | Msa0900110 | 0.808948 | 2.409600e-50 | -8.615850e-47 |
| Msa0672550 | Msa0900110 | 0.804530 | 2.066518e-49 | -8.615850e-47 |
| Msa0675410 | Msa0900110 | 0.820800 | 5.663704e-53 | -8.615850e-47 |
| Msa0682680 | Msa0900110 | 0.802830 | 4.657899e-49 | -8.615850e-47 |
| Msa0685140 | Msa0900110 | 0.820558 | 6.439220e-53 | -8.615850e-47 |
| Msa0688960 | Msa0900110 | 0.811415 | 7.080646e-51 | -8.615850e-47 |
| Msa0689260 | Msa0900110 | 0.823555 | 1.300442e-53 | -8.615850e-47 |
| Msa0691900 | Msa0900110 | 0.812566 | 3.974453e-51 | -8.615850e-47 |
| Msa0692830 | Msa0900110 | 0.820605 | 6.278989e-53 | -8.615850e-47 |
| Msa0692950 | Msa0900110 | 0.805560 | 1.258724e-49 | -8.615850e-47 |
| Msa0698490 | Msa0900110 | 0.800243 | 1.579143e-48 | -8.615850e-47 |
| Msa0698540 | Msa0900110 | 0.821805 | 3.321340e-53 | -8.615850e-47 |
| Msa0709500 | Msa0900110 | 0.805396 | 1.362294e-49 | -8.615850e-47 |
| Msa0711780 | Msa0900110 | 0.815917 | 7.230282e-52 | -8.615850e-47 |
| Msa0715700 | Msa0900110 | 0.816930 | 4.290515e-52 | -8.615850e-47 |
| Msa0719420 | Msa0900110 | 0.813153 | 2.956177e-51 | -8.615850e-47 |
| Msa0748170 | Msa0900110 | 0.805370 | 1.379221e-49 | -8.615850e-47 |
| Msa0772480 | Msa0900110 | 0.818378 | 2.022122e-52 | -8.615850e-47 |
| Msa0784380 | Msa0900110 | 0.807213 | 5.640459e-50 | -8.615850e-47 |
| Msa0789680 | Msa0900110 | 0.814967 | 1.176525e-51 | -8.615850e-47 |
| Msa0790660 | Msa0900110 | -0.807455 | 5.012197e-50 | -8.615850e-47 |
| Msa0790850 | Msa0900110 | 0.806509 | 7.948650e-50 | -8.615850e-47 |
| Msa0793800 | Msa0900110 | 0.809493 | 1.841146e-50 | -8.615850e-47 |
| Msa0794670 | Msa0900110 | 0.823056 | 1.700900e-53 | -8.615850e-47 |
| Msa0798440 | Msa0900110 | 0.820254 | 7.557570e-53 | -8.615850e-47 |
| Msa0802410 | Msa0900110 | 0.823436 | 1.386814e-53 | -8.615850e-47 |
| Msa0808080 | Msa0900110 | 0.805839 | 1.099495e-49 | -8.615850e-47 |
| Msa0808270 | Msa0900110 | 0.803442 | 3.479958e-49 | -8.615850e-47 |
| Msa0816730 | Msa0900110 | 0.803310 | 3.705629e-49 | -8.615850e-47 |
| Msa0830540 | Msa0900110 | 0.817249 | 3.637025e-52 | -8.615850e-47 |
| Msa0831530 | Msa0900110 | 0.822340 | 2.495854e-53 | -8.615850e-47 |
| Msa0833190 | Msa0900110 | -0.803103 | 4.088975e-49 | -8.615850e-47 |
| Msa0127020 | Msa0900110 | 0.820484 | 6.693810e-53 | -8.615850e-47 |
| Msa0128860 | Msa0900110 | 0.808749 | 2.657329e-50 | -8.615850e-47 |
| Msa0136070 | Msa0900110 | 0.832719 | 8.051465e-56 | -8.615850e-47 |
| Msa0136100 | Msa0900110 | 0.826987 | 2.006173e-54 | -8.615850e-47 |
| Msa0137550 | Msa0900110 | 0.810005 | 1.428815e-50 | -8.615850e-47 |
| Msa0137840 | Msa0900110 | 0.806555 | 7.769642e-50 | -8.615850e-47 |
| Msa0137990 | Msa0900110 | 0.809933 | 1.481342e-50 | -8.615850e-47 |
| Msa0142980 | Msa0900110 | 0.803336 | 3.660206e-49 | -8.615850e-47 |
| Msa0144370 | Msa0900110 | 0.803226 | 3.856493e-49 | -8.615850e-47 |
| Msa0146770 | Msa0900110 | 0.802466 | 5.536365e-49 | -8.615850e-47 |
| Msa0150820 | Msa0900110 | 0.806483 | 8.048076e-50 | -8.615850e-47 |
| Msa0159170 | Msa0900110 | 0.813560 | 2.406479e-51 | -8.615850e-47 |
| Msa0160550 | Msa0900110 | 0.817170 | 3.788774e-52 | -8.615850e-47 |
| Msa0165660 | Msa0900110 | 0.801296 | 9.627343e-49 | -8.615850e-47 |
| Msa0168230 | Msa0900110 | 0.816357 | 5.766300e-52 | -8.615850e-47 |
| Msa0169280 | Msa0900110 | 0.816477 | 5.420110e-52 | -8.615850e-47 |
| Msa0171540 | Msa0900110 | 0.836072 | 1.159361e-56 | -8.615850e-47 |
| Msa0172970 | Msa0900110 | 0.828347 | 9.458266e-55 | -8.615850e-47 |
| Msa0174730 | Msa0900110 | 0.808083 | 3.687300e-50 | -8.615850e-47 |
| Msa0183900 | Msa0900110 | 0.815975 | 7.017763e-52 | -8.615850e-47 |
| Msa0184040 | Msa0900110 | 0.815799 | 7.681464e-52 | -8.615850e-47 |
| Msa0184780 | Msa0900110 | 0.806159 | 9.418702e-50 | -8.615850e-47 |
| Msa0187120 | Msa0900110 | 0.834043 | 3.764321e-56 | -8.615850e-47 |
| Msa0188350 | Msa0900110 | 0.805837 | 1.101017e-49 | -8.615850e-47 |
| Msa0189300 | Msa0900110 | 0.837487 | 5.048379e-57 | -8.615850e-47 |
| Msa0189520 | Msa0900110 | 0.810520 | 1.106735e-50 | -8.615850e-47 |
| Msa0208220 | Msa0900110 | 0.805250 | 1.461292e-49 | -8.615850e-47 |
| Msa0209500 | Msa0900110 | 0.801499 | 8.748792e-49 | -8.615850e-47 |
| Msa0220720 | Msa0900110 | 0.821234 | 4.499029e-53 | -8.615850e-47 |
| Msa0228070 | Msa0900110 | 0.829877 | 4.025179e-55 | -8.615850e-47 |
| Msa0229170 | Msa0900110 | 0.816807 | 4.571831e-52 | -8.615850e-47 |
| Msa0231660 | Msa0900110 | 0.836776 | 7.673364e-57 | -8.615850e-47 |
| Msa0366890 | Msa0900110 | 0.804469 | 2.127762e-49 | -8.615850e-47 |
| Msa0383800 | Msa0900110 | 0.814337 | 1.622121e-51 | -8.615850e-47 |
| Msa0385490 | Msa0900110 | 0.813111 | 3.019437e-51 | -8.615850e-47 |
| Msa0385580 | Msa0900110 | 0.825466 | 4.615932e-54 | -8.615850e-47 |
| Msa0388700 | Msa0900110 | 0.834259 | 3.324617e-56 | -8.615850e-47 |
| Msa0397540 | Msa0900110 | 0.845899 | 3.045042e-59 | -8.615850e-47 |
| Msa0402790 | Msa0900110 | 0.811833 | 5.746067e-51 | -8.615850e-47 |
| Msa0434180 | Msa0900110 | 0.809666 | 1.690678e-50 | -8.615850e-47 |
| Msa0457510 | Msa0900110 | 0.819501 | 1.123630e-52 | -8.615850e-47 |
| Msa0458060 | Msa0900110 | 0.804406 | 2.193466e-49 | -8.615850e-47 |
| Msa0465550 | Msa0900110 | 0.805539 | 1.271284e-49 | -8.615850e-47 |
| Msa0466250 | Msa0900110 | 0.818690 | 1.718559e-52 | -8.615850e-47 |
| Msa0481530 | Msa0900110 | 0.808377 | 3.191934e-50 | -8.615850e-47 |
| Msa0241390 | Msa0900110 | 0.801797 | 7.600929e-49 | -8.615850e-47 |
| Msa0241470 | Msa0900110 | 0.806435 | 8.236424e-50 | -8.615850e-47 |
| Msa0262310 | Msa0900110 | 0.817127 | 3.873755e-52 | -8.615850e-47 |
| Msa0271530 | Msa0900110 | 0.811137 | 8.138163e-51 | -8.615850e-47 |
| Msa0275000 | Msa0900110 | 0.802493 | 5.465344e-49 | -8.615850e-47 |
| Msa0279220 | Msa0900110 | 0.839649 | 1.396775e-57 | -8.615850e-47 |
| Msa0279240 | Msa0900110 | 0.828323 | 9.583693e-55 | -8.615850e-47 |
| Msa0281530 | Msa0900110 | 0.804540 | 2.056481e-49 | -8.615850e-47 |
| Msa0289250 | Msa0900110 | 0.800062 | 1.718622e-48 | -8.615850e-47 |
| Msa0299870 | Msa0900110 | 0.830032 | 3.690695e-55 | -8.615850e-47 |
| Msa0306710 | Msa0900110 | 0.810263 | 1.257124e-50 | -8.615850e-47 |
| Msa0309750 | Msa0900110 | 0.837513 | 4.973899e-57 | -8.615850e-47 |
| Msa0309770 | Msa0900110 | 0.818793 | 1.628769e-52 | -8.615850e-47 |
| Msa0318980 | Msa0900110 | 0.825062 | 5.752089e-54 | -8.615850e-47 |
| Msa0326480 | Msa0900110 | 0.803167 | 3.967397e-49 | -8.615850e-47 |
| Msa0337240 | Msa0900110 | 0.824084 | 9.775085e-54 | -8.615850e-47 |
| Msa0337650 | Msa0900110 | 0.809041 | 2.301870e-50 | -8.615850e-47 |
| Msa0344540 | Msa0900110 | 0.840724 | 7.316257e-58 | -8.615850e-47 |
| Msa0345350 | Msa0900110 | 0.838697 | 2.465948e-57 | -8.615850e-47 |
| Msa0345390 | Msa0900110 | 0.813669 | 2.277439e-51 | -8.615850e-47 |
| Msa0357900 | Msa0900110 | 0.821813 | 3.307911e-53 | -8.615850e-47 |
| Msa0493410 | Msa0900110 | 0.830644 | 2.615456e-55 | -8.615850e-47 |
| Msa0506400 | Msa0900110 | 0.812304 | 4.534538e-51 | -8.615850e-47 |
| Msa0510930 | Msa0900110 | 0.806144 | 9.484694e-50 | -8.615850e-47 |
| Msa0529890 | Msa0900110 | 0.806230 | 9.100479e-50 | -8.615850e-47 |
| Msa0534900 | Msa0900110 | 0.806478 | 8.065885e-50 | -8.615850e-47 |
| Msa0541360 | Msa0900110 | 0.808244 | 3.406938e-50 | -8.615850e-47 |
| Msa0542090 | Msa0900110 | 0.830401 | 2.998497e-55 | -8.615850e-47 |
| Msa0542130 | Msa0900110 | 0.829515 | 4.930010e-55 | -8.615850e-47 |
| Msa0547160 | Msa0900110 | 0.805322 | 1.411478e-49 | -8.615850e-47 |
| Msa0548240 | Msa0900110 | 0.804611 | 1.987560e-49 | -8.615850e-47 |
| Msa0555450 | Msa0900110 | 0.838708 | 2.448961e-57 | -8.615850e-47 |
| Msa0556060 | Msa0900110 | 0.829305 | 5.545591e-55 | -8.615850e-47 |
| Msa0572840 | Msa0900110 | 0.802704 | 4.944742e-49 | -8.615850e-47 |
| Msa0581280 | Msa0900110 | 0.823407 | 1.408117e-53 | -8.615850e-47 |
| Msa0585560 | Msa0900110 | 0.812375 | 4.376195e-51 | -8.615850e-47 |
| Msa0592440 | Msa0900110 | 0.805934 | 1.050438e-49 | -8.615850e-47 |
| Msa0842830 | Msa0900110 | 0.812535 | 4.037773e-51 | -8.615850e-47 |
| Msa0849030 | Msa0900110 | 0.818654 | 1.750939e-52 | -8.615850e-47 |
| Msa0876810 | Msa0900110 | 0.836798 | 7.574796e-57 | -8.615850e-47 |
| Msa0887250 | Msa0900110 | 0.849817 | 2.534152e-60 | -8.615850e-47 |
| Msa0890550 | Msa0900110 | 0.811575 | 6.536476e-51 | -8.615850e-47 |
| Msa0900110 | Msa0926850 | 0.825744 | 3.967225e-54 | -8.615850e-47 |
| Msa0900110 | Msa0945440 | 0.814138 | 1.794881e-51 | -8.615850e-47 |
| Msa0900110 | Msa0947660 | 0.809417 | 1.911864e-50 | -8.615850e-47 |
| Msa0900110 | Msa0949590 | 0.800416 | 1.455868e-48 | -8.615850e-47 |
| Msa0900110 | Msa0959360 | 0.801147 | 1.032954e-48 | -8.615850e-47 |
| Msa0900110 | Msa0969630 | 0.805709 | 1.171253e-49 | -8.615850e-47 |
| Msa0900110 | Msa0970420 | 0.802956 | 4.386041e-49 | -8.615850e-47 |
| Msa0900110 | Msa0974070 | 0.803473 | 3.428757e-49 | -8.615850e-47 |
| Msa0900110 | Msa0989540 | 0.807966 | 3.904094e-50 | -8.615850e-47 |
| Msa0900110 | Msa0999970 | 0.877280 | 7.134658e-69 | -8.615850e-47 |
| Msa0900110 | Msa1006840 | 0.825437 | 4.690040e-54 | -8.615850e-47 |
| Msa0900110 | Msa1009820 | 0.831467 | 1.642049e-55 | -8.615850e-47 |
| Msa0900110 | Msa1019260 | 0.803178 | 3.945895e-49 | -8.615850e-47 |
| Msa0900110 | Msa1030620 | 0.810189 | 1.304164e-50 | -8.615850e-47 |
| Msa0900110 | Msa1037420 | 0.820290 | 7.414662e-53 | -8.615850e-47 |
| Msa0900110 | Msa1041850 | 0.809632 | 1.718685e-50 | -8.615850e-47 |
| Msa0900110 | Msa1051200 | 0.854993 | 8.499604e-62 | -8.615850e-47 |
| Msa0900110 | Msa1055410 | 0.814618 | 1.405618e-51 | -8.615850e-47 |
| Msa0900110 | Msa1060260 | 0.811137 | 8.138446e-51 | -8.615850e-47 |
| Msa0900110 | Msa1063510 | 0.800945 | 1.135858e-48 | -8.615850e-47 |
| Msa0900110 | Msa1064250 | 0.806967 | 6.358912e-50 | -8.615850e-47 |
| Msa0900110 | Msa1077030 | 0.814454 | 1.528470e-51 | -8.615850e-47 |
| Msa0900110 | Msa1081930 | 0.817034 | 4.066109e-52 | -8.615850e-47 |
| Msa0900110 | Msa1084470 | 0.809467 | 1.865505e-50 | -8.615850e-47 |
| Msa0900110 | Msa1087710 | 0.803977 | 2.694163e-49 | -8.615850e-47 |
| Msa0900110 | Msa1088640 | 0.801886 | 7.286005e-49 | -8.615850e-47 |
| Msa0900110 | Msa1091940 | 0.842910 | 1.937275e-58 | -8.615850e-47 |
| Msa0900110 | Msa1104140 | 0.823019 | 1.735040e-53 | -8.615850e-47 |
| Msa0900110 | Msa1104210 | 0.819635 | 1.047054e-52 | -8.615850e-47 |
| Msa0900110 | Msa1106700 | 0.813703 | 2.238005e-51 | -8.615850e-47 |
| Msa0900110 | Msa1109680 | 0.818287 | 2.121195e-52 | -8.615850e-47 |
| Msa0900110 | Msa1115080 | 0.800023 | 1.750512e-48 | -8.615850e-47 |
| Msa0900110 | Msa1123810 | 0.804480 | 2.117432e-49 | -8.615850e-47 |
| Msa0900110 | Msa1135890 | 0.800815 | 1.207617e-48 | -8.615850e-47 |
| Msa0900110 | Msa1137700 | 0.851514 | 8.445350e-61 | -8.615850e-47 |
| Msa0900110 | Msa1160590 | 0.833762 | 4.427400e-56 | -8.615850e-47 |
| Msa0900110 | Msa1167340 | 0.804917 | 1.716083e-49 | -8.615850e-47 |
| Msa0900110 | Msa1171360 | 0.802546 | 5.330509e-49 | -8.615850e-47 |
| Msa0900110 | Msa1181250 | 0.840614 | 7.822047e-58 | -8.615850e-47 |
| Msa0900110 | Msa1181330 | 0.840322 | 9.322129e-58 | -8.615850e-47 |
| Msa0900110 | Msa1208880 | 0.845425 | 4.094150e-59 | -8.615850e-47 |
| Msa0900110 | Msa1209200 | 0.825087 | 5.675612e-54 | -8.615850e-47 |
| Msa0900110 | Msa1209260 | 0.800463 | 1.424214e-48 | -8.615850e-47 |
| Msa0900110 | Msa1209760 | 0.810407 | 1.170734e-50 | -8.615850e-47 |
| Msa0900110 | Msa1216260 | 0.813687 | 2.256075e-51 | -8.615850e-47 |
| Msa0900110 | Msa1224810 | 0.821596 | 3.712509e-53 | -8.615850e-47 |
| Msa0900110 | Msa1231840 | 0.809368 | 1.959133e-50 | -8.615850e-47 |
| Msa0900110 | Msa1237940 | 0.836503 | 9.009363e-57 | -8.615850e-47 |
| Msa0900110 | Msa1245930 | 0.842404 | 2.640645e-58 | -8.615850e-47 |
| Msa0900110 | Msa1254730 | 0.829003 | 6.564176e-55 | -8.615850e-47 |
| Msa0900110 | Msa1259060 | 0.842483 | 2.514999e-58 | -8.615850e-47 |
| Msa0900110 | Msa1265630 | 0.839059 | 1.987523e-57 | -8.615850e-47 |
| Msa0900110 | Msa1287460 | 0.808245 | 3.404863e-50 | -8.615850e-47 |
| Msa0900110 | Msa1294820 | 0.801554 | 8.522578e-49 | -8.615850e-47 |
| Msa0900110 | Msa1295110 | 0.800961 | 1.127297e-48 | -8.615850e-47 |
| Msa0900110 | Msa1296830 | 0.807051 | 6.105003e-50 | -8.615850e-47 |
| Msa0900110 | Msa1302380 | 0.816074 | 6.669088e-52 | -8.615850e-47 |
| Msa0900110 | Msa1302850 | 0.800642 | 1.309816e-48 | -8.615850e-47 |
| Msa0900110 | Msa1312520 | 0.801436 | 9.014306e-49 | -8.615850e-47 |
| Msa0900110 | Msa1332590 | 0.841405 | 4.847079e-58 | -8.615850e-47 |
| Msa0900110 | Msa1351540 | 0.820251 | 7.571491e-53 | -8.615850e-47 |
| Msa0900110 | Msa1358250 | 0.825168 | 5.428988e-54 | -8.615850e-47 |
| Msa0900110 | Msa1368060 | 0.828637 | 8.048464e-55 | -8.615850e-47 |
| Msa0900110 | Msa1368120 | 0.800334 | 1.513037e-48 | -8.615850e-47 |
| Msa0900110 | Msa1379760 | 0.805832 | 1.103518e-49 | -8.615850e-47 |
| Msa0900110 | Msa1382560 | 0.802118 | 6.527810e-49 | -8.615850e-47 |
| Msa0900110 | Msa1385770 | 0.802845 | 4.624335e-49 | -8.615850e-47 |
| Msa0900110 | Msa1386780 | 0.806387 | 8.432400e-50 | -8.615850e-47 |
| Msa0900110 | Msa1389800 | 0.800306 | 1.532971e-48 | -8.615850e-47 |
| Msa0900110 | Msa1392780 | 0.833146 | 6.306396e-56 | -8.615850e-47 |
| Msa0900110 | Msa1393570 | 0.808496 | 3.010490e-50 | -8.615850e-47 |
| Msa0900110 | Msa1394290 | 0.840536 | 8.197114e-58 | -8.615850e-47 |
| Msa0900110 | Msa1400580 | 0.848659 | 5.322865e-60 | -8.615850e-47 |
| Msa0900110 | Msa1403340 | 0.818504 | 1.894178e-52 | -8.615850e-47 |
| Msa0900110 | Msa1409240 | 0.801253 | 9.824274e-49 | -8.615850e-47 |
| Msa0900110 | Msa1410100 | 0.804728 | 1.879151e-49 | -8.615850e-47 |
| Msa0900110 | Msa1419870 | 0.826110 | 3.247569e-54 | -8.615850e-47 |
| Msa0900110 | Msa1423350 | 0.800945 | 1.135646e-48 | -8.615850e-47 |
| Msa0900110 | Msa1432420 | 0.805936 | 1.049260e-49 | -8.615850e-47 |
| Msa0900110 | Msa1433390 | 0.804524 | 2.072815e-49 | -8.615850e-47 |
| Msa0900110 | Msa1439550 | 0.806018 | 1.008352e-49 | -8.615850e-47 |
| Msa0900110 | Msa1444310 | 0.846077 | 2.723689e-59 | -8.615850e-47 |
| Msa0900110 | Msa1451550 | 0.803599 | 3.228420e-49 | -8.615850e-47 |
| Msa0900110 | Msa1454480 | 0.800134 | 1.661987e-48 | -8.615850e-47 |
| Msa0900110 | Msa1457920 | 0.842487 | 2.509260e-58 | -8.615850e-47 |
| Msa0900110 | Msa1466540 | 0.800258 | 1.568137e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0900110 | MtrunA17_Chr6g0486061 | 93.750 | 208 | 13 | 0 | 1 | 208 | 1 | 208 | 1.50e-146 | 405 |
| Msa0900110 | MtrunA17_Chr6g0486071 | 85.096 | 208 | 31 | 0 | 1 | 208 | 1 | 208 | 3.31e-132 | 369 |
| Msa0900110 | MtrunA17_Chr7g0255501 | 78.095 | 210 | 18 | 3 | 1 | 208 | 1 | 184 | 9.71e-112 | 317 |
| Msa0900110 | MtrunA17_Chr5g0393991 | 61.836 | 207 | 77 | 1 | 1 | 207 | 1 | 205 | 1.17e-88 | 259 |
| Msa0900110 | MtrunA17_Chr5g0401571 | 60.000 | 205 | 75 | 2 | 1 | 204 | 1 | 199 | 3.27e-81 | 240 |
| Msa0900110 | MtrunA17_Chr5g0401581 | 57.488 | 207 | 86 | 1 | 2 | 208 | 127 | 331 | 3.41e-81 | 245 |
| Msa0900110 | MtrunA17_Chr5g0401581 | 45.865 | 133 | 72 | 0 | 1 | 133 | 1 | 133 | 2.41e-32 | 119 |
| Msa0900110 | MtrunA17_Chr6g0466791 | 57.971 | 207 | 84 | 1 | 1 | 207 | 1 | 204 | 9.05e-81 | 239 |
| Msa0900110 | MtrunA17_Chr7g0256491 | 40.513 | 195 | 111 | 2 | 12 | 205 | 55 | 245 | 9.20e-44 | 146 |
| Msa0900110 | MtrunA17_Chr3g0083801 | 37.563 | 197 | 114 | 4 | 12 | 205 | 31 | 221 | 1.04e-34 | 122 |
| Msa0900110 | MtrunA17_Chr3g0101971 | 36.752 | 117 | 51 | 6 | 87 | 196 | 15 | 115 | 1.61e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0900110 | AT3G22320.1 | 56.373 | 204 | 87 | 1 | 2 | 205 | 1 | 202 | 3.85e-80 | 238 |
| Msa0900110 | AT5G57980.1 | 41.546 | 207 | 115 | 3 | 5 | 207 | 5 | 209 | 2.81e-52 | 167 |
| Msa0900110 | AT2G41340.1 | 38.000 | 200 | 119 | 2 | 10 | 208 | 23 | 218 | 2.04e-40 | 137 |
| Msa0900110 | AT3G57080.1 | 35.784 | 204 | 126 | 2 | 3 | 205 | 20 | 219 | 4.77e-39 | 134 |
| Msa0900110 | AT3G54490.1 | 37.056 | 197 | 119 | 2 | 10 | 205 | 38 | 230 | 1.52e-36 | 128 |
| Msa0900110 | AT2G41340.2 | 34.286 | 175 | 101 | 3 | 10 | 183 | 23 | 184 | 1.49e-24 | 96.3 |
| Msa0900110 | AT2G41340.3 | 36.478 | 159 | 96 | 2 | 10 | 167 | 23 | 177 | 5.17e-24 | 94.4 |
Find 53 sgRNAs with CRISPR-Local
Find 263 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAGCGCCTTGAAGTCTTTC+TGG | 0.158098 | 6_1:+95508394 | Msa0900110:CDS |
| TTTCATGTGTTCGCCGTATT+TGG | 0.178722 | 6_1:-95508156 | None:intergenic |
| GAATGTTGATAATGGGATTT+TGG | 0.182720 | 6_1:+95508307 | Msa0900110:CDS |
| ATTCATTTGTGAAAACAAAA+TGG | 0.222804 | 6_1:+95507917 | None:intergenic |
| GATCCTGTTGCGAGATATTA+TGG | 0.267061 | 6_1:+95512074 | Msa0900110:CDS |
| CTTGGTGTTAAGATTGTTAG+AGG | 0.323964 | 6_1:+95508260 | Msa0900110:CDS |
| CCTATTCCCTGTTTGTGTCT+TGG | 0.334813 | 6_1:+95512345 | Msa0900110:three_prime_UTR |
| TAGAGTGCAAAGGCTGGTTT+TGG | 0.347365 | 6_1:+95512453 | Msa0900110:three_prime_UTR |
| AGTTTCTATCGGATAACATT+TGG | 0.352776 | 6_1:-95508085 | None:intergenic |
| TTGAACGAGAATGTTGATAA+TGG | 0.358712 | 6_1:+95508299 | Msa0900110:CDS |
| GAATTGCTTCTTGAGCTTAT+CGG | 0.370172 | 6_1:+95512165 | Msa0900110:exon |
| GGATCCGACGTCAAAATTCT+AGG | 0.372876 | 6_1:-95512056 | None:intergenic |
| AATACATCCAAGACACAAAC+AGG | 0.376773 | 6_1:-95512352 | None:intergenic |
| AATACTAGAACAGTGTCTAT+AGG | 0.392741 | 6_1:+95507941 | Msa0900110:five_prime_UTR |
| TATCGGATAACATTTGGAAA+AGG | 0.393302 | 6_1:-95508079 | None:intergenic |
| TGGGTTGTTTCTGTGAGTTT+TGG | 0.406142 | 6_1:-95508198 | None:intergenic |
| ATACTAGAACAGTGTCTATA+GGG | 0.417809 | 6_1:+95507942 | Msa0900110:five_prime_UTR |
| ACACATGAAACGAGAACAAT+TGG | 0.418532 | 6_1:+95508169 | Msa0900110:CDS |
| CAACATGACATATGTTGTAA+TGG | 0.423834 | 6_1:+95512289 | Msa0900110:three_prime_UTR |
| TTCATTTGTGAAAACAAAAT+GGG | 0.426939 | 6_1:+95507918 | None:intergenic |
| TTCTCGAGACATGGTGAGTT+CGG | 0.435332 | 6_1:-95508123 | None:intergenic |
| ATCGGATAACATTTGGAAAA+GGG | 0.437052 | 6_1:-95508078 | None:intergenic |
| AGTCCATAATATCTCGCAAC+AGG | 0.442138 | 6_1:-95512077 | None:intergenic |
| CCAAGACACAAACAGGGAAT+AGG | 0.450083 | 6_1:-95512345 | None:intergenic |
| TGAACGAGAATGTTGATAAT+GGG | 0.456181 | 6_1:+95508300 | Msa0900110:CDS |
| GACAAGTTGTCAGGATTATC+CGG | 0.456842 | 6_1:+95512108 | Msa0900110:CDS |
| CAATTACCAGAAAGACTTCA+AGG | 0.467927 | 6_1:-95508400 | None:intergenic |
| TTCTCTGATGATGCTAAACT+TGG | 0.475053 | 6_1:+95508242 | Msa0900110:CDS |
| CACAGTGTATTTCTTGAGCA+AGG | 0.476320 | 6_1:-95510747 | None:intergenic |
| GTTGCTGAAATGAGTTCTGT+TGG | 0.477137 | 6_1:+95508368 | Msa0900110:CDS |
| ATATAATCACTATGCATGCT+TGG | 0.479186 | 6_1:-95512225 | None:intergenic |
| GATAAGCTCAAGAAGCAATT+CGG | 0.487663 | 6_1:-95512163 | None:intergenic |
| TAAGGCGTGGACAAGTTGTC+AGG | 0.488439 | 6_1:+95512099 | Msa0900110:CDS |
| GAAGATTTCATCTCCAAATA+CGG | 0.498349 | 6_1:+95508143 | Msa0900110:CDS |
| TTGCGAGATATTATGGACTA+AGG | 0.534711 | 6_1:+95512081 | Msa0900110:CDS |
| TGCCTGCAGTCTCACTTGGC+CGG | 0.539482 | 6_1:-95512127 | None:intergenic |
| CAAGGCTTTCTTCTCAGCGT+CGG | 0.546747 | 6_1:-95510729 | None:intergenic |
| TATGTGCCTGCAGTCTCACT+TGG | 0.550720 | 6_1:-95512131 | None:intergenic |
| TTCGACGAGGTAGTTTCTAT+CGG | 0.567048 | 6_1:-95508096 | None:intergenic |
| AAACACCATTGTTGTTGTGC+CGG | 0.588810 | 6_1:-95508015 | None:intergenic |
| GATGAAATCTTCTCGAGACA+TGG | 0.592229 | 6_1:-95508132 | None:intergenic |
| GGTGCAGGAGGATGAACTGC+TGG | 0.602196 | 6_1:+95510661 | Msa0900110:intron |
| ATCCGGCCAAGTGAGACTGC+AGG | 0.602297 | 6_1:+95512125 | Msa0900110:CDS |
| ATACACTGTGAAAGATACTC+AGG | 0.612579 | 6_1:+95510760 | Msa0900110:CDS |
| AGATATTATGGACTAAGGCG+TGG | 0.621762 | 6_1:+95512086 | Msa0900110:CDS |
| ACGCACCGGCACAACAACAA+TGG | 0.621764 | 6_1:+95508010 | Msa0900110:exon |
| AACTGCTGGTGAACATAACA+AGG | 0.623262 | 6_1:+95510675 | Msa0900110:CDS |
| GCGTCGGTGAGAACCTGATG+TGG | 0.633208 | 6_1:-95510713 | None:intergenic |
| AGAGCGACAACAGTTACAGA+AGG | 0.636874 | 6_1:+95507985 | Msa0900110:five_prime_UTR |
| TCGGTGAGAACCTGATGTGG+AGG | 0.676021 | 6_1:-95510710 | None:intergenic |
| AGTTACAGAAGGAAACGCAC+CGG | 0.680917 | 6_1:+95507996 | Msa0900110:five_prime_UTR |
| TGAGTTCGGTGTCTTCGACG+AGG | 0.723258 | 6_1:-95508109 | None:intergenic |
| ATACATCCAAGACACAAACA+GGG | 0.734337 | 6_1:-95512351 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTAACAAATTATTATCA+GGG | - | chr6_1:95508564-95508583 | None:intergenic | 10.0% |
| !!! | TATTTTAACAAATTATTATC+AGG | - | chr6_1:95508565-95508584 | None:intergenic | 10.0% |
| !! | TTATATATTAAAAGCTTAAT+AGG | + | chr6_1:95509213-95509232 | Msa0900110:intron | 10.0% |
| !!! | AACAATTTTCATATTATTAT+CGG | - | chr6_1:95509514-95509533 | None:intergenic | 10.0% |
| !! | TTTAATTCAATATGATCATT+AGG | + | chr6_1:95508812-95508831 | Msa0900110:intron | 15.0% |
| !! | TTAATTCAATATGATCATTA+GGG | + | chr6_1:95508813-95508832 | Msa0900110:intron | 15.0% |
| !!! | ATTTTCACAAATTATTATCA+AGG | - | chr6_1:95509448-95509467 | None:intergenic | 15.0% |
| !! | AAGGTTATTACTAATAAAAT+AGG | - | chr6_1:95511034-95511053 | None:intergenic | 15.0% |
| !! | AAATTCTAATACATGAATTA+TGG | + | chr6_1:95511244-95511263 | Msa0900110:intron | 15.0% |
| !!! | AAATTTTAGGTATAACATAT+TGG | - | chr6_1:95512202-95512221 | None:intergenic | 15.0% |
| !!! | TTTATTTTTGTTGTTGTAAT+GGG | + | chr6_1:95512252-95512271 | Msa0900110:three_prime_UTR | 15.0% |
| !! | TTTAGTGTAATTATAAGTGT+CGG | - | chr6_1:95508664-95508683 | None:intergenic | 20.0% |
| !! | TAATTCAATATGATCATTAG+GGG | + | chr6_1:95508814-95508833 | Msa0900110:intron | 20.0% |
| !!! | TGTAAAATAGGCTTTTAAAT+AGG | - | chr6_1:95508988-95509007 | None:intergenic | 20.0% |
| !! | TAAATAACAAATACTTACGA+AGG | + | chr6_1:95509091-95509110 | Msa0900110:intron | 20.0% |
| !! | AAATAACAAATACTTACGAA+GGG | + | chr6_1:95509092-95509111 | Msa0900110:intron | 20.0% |
| !! | TAAAGCCTATTTACTTAAAT+AGG | - | chr6_1:95509284-95509303 | None:intergenic | 20.0% |
| !! | ATGATCATATATGATCATTA+GGG | - | chr6_1:95509410-95509429 | None:intergenic | 20.0% |
| !!! | TTTTGTAATATCTGAATTGT+TGG | + | chr6_1:95509550-95509569 | Msa0900110:intron | 20.0% |
| !! | GACAAATTGATATAATTCAA+TGG | + | chr6_1:95509886-95509905 | Msa0900110:intron | 20.0% |
| !! | GACTAAAAAAATTCAATTGA+AGG | - | chr6_1:95510062-95510081 | None:intergenic | 20.0% |
| !! | TTACTAATAAAATAGGAACT+AGG | - | chr6_1:95511027-95511046 | None:intergenic | 20.0% |
| !!! | GATTTTAATCTTGTTCAATT+GGG | - | chr6_1:95511341-95511360 | None:intergenic | 20.0% |
| !!! | TGATTTTAATCTTGTTCAAT+TGG | - | chr6_1:95511342-95511361 | None:intergenic | 20.0% |
| !! | TAAAATCACTTCATATTTGA+TGG | + | chr6_1:95511354-95511373 | Msa0900110:intron | 20.0% |
| !! | TACATCATTTAATCTAGAAA+TGG | - | chr6_1:95511480-95511499 | None:intergenic | 20.0% |
| !!! | TTAGCAACTTTAATTTCTTA+TGG | + | chr6_1:95511875-95511894 | Msa0900110:intron | 20.0% |
| !!! | TCTTTATCTAATGGATTTAT+TGG | + | chr6_1:95511931-95511950 | Msa0900110:intron | 20.0% |
| !!! | CTTTATTTTTGTTGTTGTAA+TGG | + | chr6_1:95512251-95512270 | Msa0900110:three_prime_UTR | 20.0% |
| !!! | ACTCTATTTTTTTATTTCTC+AGG | - | chr6_1:95512439-95512458 | None:intergenic | 20.0% |
| !! | AATAAAAAAATAGAGTGCAA+AGG | + | chr6_1:95512443-95512462 | Msa0900110:three_prime_UTR | 20.0% |
| !!! | TTGTTAGAGGTTTTATTACT+AGG | + | chr6_1:95508273-95508292 | Msa0900110:CDS | 25.0% |
| !!! | TTTTGTCATTTCTGAATTGT+TGG | + | chr6_1:95508435-95508454 | Msa0900110:intron | 25.0% |
| ! | TTAACAAATTATTATCAGGG+TGG | - | chr6_1:95508561-95508580 | None:intergenic | 25.0% |
| !! | TAAAAGCCTATTTTACACTA+AGG | + | chr6_1:95508991-95509010 | Msa0900110:intron | 25.0% |
| !! | AAGTCATATTTGTGTGTTTT+AGG | - | chr6_1:95509067-95509086 | None:intergenic | 25.0% |
| ! | CTATTTAGTAGCAGATATAT+TGG | - | chr6_1:95509127-95509146 | None:intergenic | 25.0% |
| ! | ATATTAAAAGCTTAATAGGC+CGG | + | chr6_1:95509217-95509236 | Msa0900110:intron | 25.0% |
| ! | TGATCATATATGATCATTAG+GGG | - | chr6_1:95509409-95509428 | None:intergenic | 25.0% |
| ! | CATGATCATATATGATCATT+AGG | - | chr6_1:95509411-95509430 | None:intergenic | 25.0% |
| !! | AATGATACTTTTACAACAGA+TGG | - | chr6_1:95510093-95510112 | None:intergenic | 25.0% |
| ! | TTGCAAATTCGTAAATTTGA+AGG | + | chr6_1:95510242-95510261 | Msa0900110:intron | 25.0% |
| !! | GTGATTCATTCTTTTATAAG+AGG | + | chr6_1:95510305-95510324 | Msa0900110:intron | 25.0% |
| ! | ATTCTAACCAAAAAAATTCC+TGG | - | chr6_1:95510559-95510578 | None:intergenic | 25.0% |
| !!! | TTTTATTACTAGCTTTACAG+AGG | - | chr6_1:95511185-95511204 | None:intergenic | 25.0% |
| ! | CTAATACATGAATTATGGTT+TGG | + | chr6_1:95511249-95511268 | Msa0900110:intron | 25.0% |
| ! | TCATTTAATCTAGAAATGGA+AGG | - | chr6_1:95511476-95511495 | None:intergenic | 25.0% |
| ! | GTATATACTATAACTCTGTT+TGG | + | chr6_1:95511497-95511516 | Msa0900110:intron | 25.0% |
| ! | GTGATTAAAGTAAAGTTGTT+TGG | + | chr6_1:95511557-95511576 | Msa0900110:intron | 25.0% |
| ! | ATCCATTAGATAAAGAATGA+AGG | - | chr6_1:95511927-95511946 | None:intergenic | 25.0% |
| !!! | GTAGTTTTGATTTTCAGTTA+TGG | + | chr6_1:95512409-95512428 | Msa0900110:three_prime_UTR | 25.0% |
| AATACTAGAACAGTGTCTAT+AGG | + | chr6_1:95507941-95507960 | Msa0900110:five_prime_UTR | 30.0% | |
| ATACTAGAACAGTGTCTATA+GGG | + | chr6_1:95507942-95507961 | Msa0900110:five_prime_UTR | 30.0% | |
| !!! | ACATTTGGAAAAGGGTTTTT+TGG | - | chr6_1:95508073-95508092 | None:intergenic | 30.0% |
| ATCGGATAACATTTGGAAAA+GGG | - | chr6_1:95508081-95508100 | None:intergenic | 30.0% | |
| TATCGGATAACATTTGGAAA+AGG | - | chr6_1:95508082-95508101 | None:intergenic | 30.0% | |
| AGTTTCTATCGGATAACATT+TGG | - | chr6_1:95508088-95508107 | None:intergenic | 30.0% | |
| GAAGATTTCATCTCCAAATA+CGG | + | chr6_1:95508143-95508162 | Msa0900110:CDS | 30.0% | |
| !!! | ACACACAGATTTTTTCAGAT+GGG | - | chr6_1:95508220-95508239 | None:intergenic | 30.0% |
| !!! | AACACACAGATTTTTTCAGA+TGG | - | chr6_1:95508221-95508240 | None:intergenic | 30.0% |
| ! | TTGAACGAGAATGTTGATAA+TGG | + | chr6_1:95508299-95508318 | Msa0900110:CDS | 30.0% |
| !! | TGAACGAGAATGTTGATAAT+GGG | + | chr6_1:95508300-95508319 | Msa0900110:CDS | 30.0% |
| !!! | GAATGTTGATAATGGGATTT+TGG | + | chr6_1:95508307-95508326 | Msa0900110:CDS | 30.0% |
| !!! | TATAATTTTTGAAGTAGGCC+AGG | - | chr6_1:95508881-95508900 | None:intergenic | 30.0% |
| TGGCCTACTTCAAAAATTAT+AGG | + | chr6_1:95508880-95508899 | Msa0900110:intron | 30.0% | |
| !!! | AGGCCTATAATTTTTGAAGT+AGG | - | chr6_1:95508886-95508905 | None:intergenic | 30.0% |
| ATAAGCATATGACGAGTAAT+AGG | - | chr6_1:95508917-95508936 | None:intergenic | 30.0% | |
| !! | ATAAGTTTTGGCCTATTTAG+TGG | - | chr6_1:95509039-95509058 | None:intergenic | 30.0% |
| AAATAGGCCAAAACTTATGA+AGG | + | chr6_1:95509041-95509060 | Msa0900110:intron | 30.0% | |
| ! | TTTTAGGCCTTCATAAGTTT+TGG | - | chr6_1:95509051-95509070 | None:intergenic | 30.0% |
| ACTCAAGCTTTCATATGATT+TGG | - | chr6_1:95509150-95509169 | None:intergenic | 30.0% | |
| CCTATTTACTTAAATAGGCT+AGG | - | chr6_1:95509279-95509298 | None:intergenic | 30.0% | |
| CCTAGCCTATTTAAGTAAAT+AGG | + | chr6_1:95509276-95509295 | Msa0900110:intron | 30.0% | |
| GAAAATAATTCACATGTGTC+TGG | + | chr6_1:95509462-95509481 | Msa0900110:intron | 30.0% | |
| ! | TGTTTGATAGCTATGAAACA+CGG | + | chr6_1:95509833-95509852 | Msa0900110:intron | 30.0% |
| !!! | ATGGCTTGATGTTTTGAAAA+AGG | + | chr6_1:95509983-95510002 | Msa0900110:intron | 30.0% |
| !!! | TGGCTTGATGTTTTGAAAAA+GGG | + | chr6_1:95509984-95510003 | Msa0900110:intron | 30.0% |
| !! | TTTTGATTGTCAATACTGCA+AGG | - | chr6_1:95510283-95510302 | None:intergenic | 30.0% |
| !! | TGCAGTATTGACAATCAAAA+TGG | + | chr6_1:95510283-95510302 | Msa0900110:intron | 30.0% |
| TTGACGAATGTGTAGAAAAA+TGG | + | chr6_1:95510390-95510409 | Msa0900110:intron | 30.0% | |
| AGATGATAACTTCTAACATG+TGG | + | chr6_1:95510916-95510935 | Msa0900110:intron | 30.0% | |
| AACTAGGAACAGATCAAATT+CGG | - | chr6_1:95511011-95511030 | None:intergenic | 30.0% | |
| GTATATTAACTAACAAGCCA+AGG | - | chr6_1:95511119-95511138 | None:intergenic | 30.0% | |
| ATATAATTGCATCACAATGC+AGG | - | chr6_1:95511146-95511165 | None:intergenic | 30.0% | |
| TGATGCAATTATATCCGAAT+TGG | + | chr6_1:95511152-95511171 | Msa0900110:intron | 30.0% | |
| !! | ACAGAGGTTATTTTCCAATT+CGG | - | chr6_1:95511169-95511188 | None:intergenic | 30.0% |
| ! | GAAGTGTTTGGTAAAATTAG+CGG | - | chr6_1:95511739-95511758 | None:intergenic | 30.0% |
| ! | CAGATTGAATTTGAAGTGTT+TGG | - | chr6_1:95511751-95511770 | None:intergenic | 30.0% |
| CAAACACTTCAAATTCAATC+TGG | + | chr6_1:95511749-95511768 | Msa0900110:intron | 30.0% | |
| ACAAATATCGTGCAAACTTA+GGG | - | chr6_1:95511810-95511829 | None:intergenic | 30.0% | |
| AACAAATATCGTGCAAACTT+AGG | - | chr6_1:95511811-95511830 | None:intergenic | 30.0% | |
| CTCCTTCATTCTTTATCTAA+TGG | + | chr6_1:95511922-95511941 | Msa0900110:intron | 30.0% | |
| ATATAATCACTATGCATGCT+TGG | - | chr6_1:95512228-95512247 | None:intergenic | 30.0% | |
| CAACATGACATATGTTGTAA+TGG | + | chr6_1:95512289-95512308 | Msa0900110:three_prime_UTR | 30.0% | |
| ACACATGAAACGAGAACAAT+TGG | + | chr6_1:95508169-95508188 | Msa0900110:CDS | 35.0% | |
| ! | TTCTCTGATGATGCTAAACT+TGG | + | chr6_1:95508242-95508261 | Msa0900110:CDS | 35.0% |
| !! | CTTGGTGTTAAGATTGTTAG+AGG | + | chr6_1:95508260-95508279 | Msa0900110:CDS | 35.0% |
| CAATTACCAGAAAGACTTCA+AGG | - | chr6_1:95508403-95508422 | None:intergenic | 35.0% | |
| ATTGATATGCAACACTGACA+CGG | + | chr6_1:95508458-95508477 | Msa0900110:intron | 35.0% | |
| TTCAATATGATCATTAGGGG+TGG | + | chr6_1:95508817-95508836 | Msa0900110:intron | 35.0% | |
| AAAAATTATAGGCCTGAGTC+TGG | + | chr6_1:95508891-95508910 | Msa0900110:intron | 35.0% | |
| !! | TCGTCATATGCTTATTTTCG+AGG | + | chr6_1:95508922-95508941 | Msa0900110:intron | 35.0% |
| ! | AGGCTTTTAAATAGGCTTTC+AGG | - | chr6_1:95508980-95508999 | None:intergenic | 35.0% |
| AAAAAGCCTATTAAGCTCGT+CGG | - | chr6_1:95509244-95509263 | None:intergenic | 35.0% | |
| TACTTAAATAGGCTAGGCTA+AGG | - | chr6_1:95509273-95509292 | None:intergenic | 35.0% | |
| CTTTATAAAAAGCTTGAGCC+TGG | + | chr6_1:95509299-95509318 | Msa0900110:intron | 35.0% | |
| ! | GCCTTTTTATTAAACGAGCT+AGG | + | chr6_1:95509321-95509340 | Msa0900110:intron | 35.0% |
| GCCTAGCTCGTTTAATAAAA+AGG | - | chr6_1:95509325-95509344 | None:intergenic | 35.0% | |
| CATATATGATCATTAGGGGT+GGG | - | chr6_1:95509405-95509424 | None:intergenic | 35.0% | |
| TCATATATGATCATTAGGGG+TGG | - | chr6_1:95509406-95509425 | None:intergenic | 35.0% | |
| TCAAGCTCTATCTAACTTTG+TGG | - | chr6_1:95509717-95509736 | None:intergenic | 35.0% | |
| TTAGATAGAGCTTGATGTGT+AGG | + | chr6_1:95509722-95509741 | Msa0900110:intron | 35.0% | |
| !! | TGTTGGAAGGTGTTTGAAAA+AGG | + | chr6_1:95509745-95509764 | Msa0900110:intron | 35.0% |
| ATCACATATCGTGTCAAACA+CGG | - | chr6_1:95509776-95509795 | None:intergenic | 35.0% | |
| !! | TTTTGAAAAAGGGTGATGAC+TGG | + | chr6_1:95509994-95510013 | Msa0900110:intron | 35.0% |
| ATTCTTTGAACCATCACATG+TGG | + | chr6_1:95510110-95510129 | Msa0900110:intron | 35.0% | |
| TGCAAACAAGAACTAAGAAC+AGG | - | chr6_1:95510161-95510180 | None:intergenic | 35.0% | |
| TAAGTCTACCACTAATCCTA+CGG | + | chr6_1:95510184-95510203 | Msa0900110:intron | 35.0% | |
| ATACACTGTGAAAGATACTC+AGG | + | chr6_1:95510760-95510779 | Msa0900110:CDS | 35.0% | |
| ! | TGGTTTGGACAATGCATATA+AGG | + | chr6_1:95511264-95511283 | Msa0900110:intron | 35.0% |
| GGTTTGGACAATGCATATAA+GGG | + | chr6_1:95511265-95511284 | Msa0900110:intron | 35.0% | |
| ! | GCGGAATTTAGCATTTCTTT+TGG | - | chr6_1:95511316-95511335 | None:intergenic | 35.0% |
| ! | AATCTTGTTCAATTGGGTTG+CGG | - | chr6_1:95511335-95511354 | None:intergenic | 35.0% |
| TACTATAACTCTGTTTGGCA+TGG | + | chr6_1:95511502-95511521 | Msa0900110:intron | 35.0% | |
| AAGTTGCTAAGACAAGTGAA+AGG | - | chr6_1:95511865-95511884 | None:intergenic | 35.0% | |
| ! | TTGCGAGATATTATGGACTA+AGG | + | chr6_1:95512081-95512100 | Msa0900110:CDS | 35.0% |
| GATAAGCTCAAGAAGCAATT+CGG | - | chr6_1:95512166-95512185 | None:intergenic | 35.0% | |
| GAATTGCTTCTTGAGCTTAT+CGG | + | chr6_1:95512165-95512184 | Msa0900110:exon | 35.0% | |
| ! | GCATGCTTGGCATAAATTTT+AGG | - | chr6_1:95512215-95512234 | None:intergenic | 35.0% |
| ATACATCCAAGACACAAACA+GGG | - | chr6_1:95512354-95512373 | None:intergenic | 35.0% | |
| AATACATCCAAGACACAAAC+AGG | - | chr6_1:95512355-95512374 | None:intergenic | 35.0% | |
| AAAAAATAGAGTGCAAAGGC+TGG | + | chr6_1:95512447-95512466 | Msa0900110:three_prime_UTR | 35.0% | |
| ! | AAACACCATTGTTGTTGTGC+CGG | - | chr6_1:95508018-95508037 | None:intergenic | 40.0% |
| TTCGACGAGGTAGTTTCTAT+CGG | - | chr6_1:95508099-95508118 | None:intergenic | 40.0% | |
| GATGAAATCTTCTCGAGACA+TGG | - | chr6_1:95508135-95508154 | None:intergenic | 40.0% | |
| TTTCATGTGTTCGCCGTATT+TGG | - | chr6_1:95508159-95508178 | None:intergenic | 40.0% | |
| !!! | TGGGTTGTTTCTGTGAGTTT+TGG | - | chr6_1:95508201-95508220 | None:intergenic | 40.0% |
| GTTGCTGAAATGAGTTCTGT+TGG | + | chr6_1:95508368-95508387 | Msa0900110:CDS | 40.0% | |
| ATGATCATTAGGGGTGGAAA+TGG | + | chr6_1:95508823-95508842 | Msa0900110:intron | 40.0% | |
| TGATCATTAGGGGTGGAAAT+GGG | + | chr6_1:95508824-95508843 | Msa0900110:intron | 40.0% | |
| !! | ATATGCTTATTTTCGAGGCC+TGG | + | chr6_1:95508927-95508946 | Msa0900110:intron | 40.0% |
| CCTAGGCCTTAGTGTAAAAT+AGG | - | chr6_1:95509000-95509019 | None:intergenic | 40.0% | |
| ! | CCTATTTTACACTAAGGCCT+AGG | + | chr6_1:95508997-95509016 | Msa0900110:intron | 40.0% |
| CTATGAGCCTACCACTAAAT+AGG | + | chr6_1:95509025-95509044 | Msa0900110:intron | 40.0% | |
| !! | GTTTTGGCCTATTTAGTGGT+AGG | - | chr6_1:95509035-95509054 | None:intergenic | 40.0% |
| AAAAGCCTATTAAGCTCGTC+GGG | - | chr6_1:95509243-95509262 | None:intergenic | 40.0% | |
| GCTCGTTTAATAAAAAGGCC+AGG | - | chr6_1:95509320-95509339 | None:intergenic | 40.0% | |
| ! | AGCCTATTTAAAGCCTAGCT+CGG | - | chr6_1:95509347-95509366 | None:intergenic | 40.0% |
| !! | AGCTAGGCTTTAAATAGGCT+AGG | + | chr6_1:95509347-95509366 | Msa0900110:intron | 40.0% |
| CTTTAAATAGGCTAGGCCAT+AGG | + | chr6_1:95509354-95509373 | Msa0900110:intron | 40.0% | |
| ATAGCTATGAAACACGGACA+TGG | + | chr6_1:95509839-95509858 | Msa0900110:intron | 40.0% | |
| TTCAATGGAATTGCGTGTGT+CGG | + | chr6_1:95509901-95509920 | Msa0900110:intron | 40.0% | |
| GATACACTGTCCATAAGTGT+CGG | + | chr6_1:95509946-95509965 | Msa0900110:intron | 40.0% | |
| CAGTATTCATCCACATGTGA+TGG | - | chr6_1:95510123-95510142 | None:intergenic | 40.0% | |
| CACATTCGTCAAATTCGCAA+TGG | - | chr6_1:95510382-95510401 | None:intergenic | 40.0% | |
| GAGTAGTAGAGATTTGTGCA+AGG | + | chr6_1:95510475-95510494 | Msa0900110:intron | 40.0% | |
| AAAAAATTCCTGGTGACACG+TGG | - | chr6_1:95510549-95510568 | None:intergenic | 40.0% | |
| !!! | CGTGTCACCAGGAATTTTTT+TGG | + | chr6_1:95510549-95510568 | Msa0900110:intron | 40.0% |
| GAGTCCTTCTTCATATGTGT+TGG | + | chr6_1:95510604-95510623 | Msa0900110:intron | 40.0% | |
| TCCTTCTTCATATGTGTTGG+TGG | + | chr6_1:95510607-95510626 | Msa0900110:intron | 40.0% | |
| ! | CCTTCTTCATATGTGTTGGT+GGG | + | chr6_1:95510608-95510627 | Msa0900110:intron | 40.0% |
| AAGGTTGAGGTAATCATCGA+TGG | + | chr6_1:95510640-95510659 | Msa0900110:intron | 40.0% | |
| AACTGCTGGTGAACATAACA+AGG | + | chr6_1:95510675-95510694 | Msa0900110:CDS | 40.0% | |
| CACAGTGTATTTCTTGAGCA+AGG | - | chr6_1:95510750-95510769 | None:intergenic | 40.0% | |
| ! | CTGTTTTCTGCACAAATCCT+TGG | + | chr6_1:95511099-95511118 | Msa0900110:intron | 40.0% |
| GTGTTTGGTAAAATTAGCGG+TGG | - | chr6_1:95511736-95511755 | None:intergenic | 40.0% | |
| ! | TTTGGTATAGTGTTGGATGG+TGG | - | chr6_1:95511783-95511802 | None:intergenic | 40.0% |
| ! | CTGTTTGGTATAGTGTTGGA+TGG | - | chr6_1:95511786-95511805 | None:intergenic | 40.0% |
| !! | GCTACCTAGAATTTTGACGT+CGG | + | chr6_1:95512052-95512071 | Msa0900110:intron | 40.0% |
| GATCCTGTTGCGAGATATTA+TGG | + | chr6_1:95512074-95512093 | Msa0900110:CDS | 40.0% | |
| AGTCCATAATATCTCGCAAC+AGG | - | chr6_1:95512080-95512099 | None:intergenic | 40.0% | |
| ! | AGATATTATGGACTAAGGCG+TGG | + | chr6_1:95512086-95512105 | Msa0900110:CDS | 40.0% |
| GACAAGTTGTCAGGATTATC+CGG | + | chr6_1:95512108-95512127 | Msa0900110:CDS | 40.0% | |
| AGAGCGACAACAGTTACAGA+AGG | + | chr6_1:95507985-95508004 | Msa0900110:five_prime_UTR | 45.0% | |
| AGTTACAGAAGGAAACGCAC+CGG | + | chr6_1:95507996-95508015 | Msa0900110:five_prime_UTR | 45.0% | |
| TTCTCGAGACATGGTGAGTT+CGG | - | chr6_1:95508126-95508145 | None:intergenic | 45.0% | |
| TAAGCGCCTTGAAGTCTTTC+TGG | + | chr6_1:95508394-95508413 | Msa0900110:CDS | 45.0% | |
| AAGGAGTGACAGTGCTTCAT+AGG | - | chr6_1:95508614-95508633 | None:intergenic | 45.0% | |
| !! | ATTATCGGTGTCAGAGTGTC+CGG | + | chr6_1:95508707-95508726 | Msa0900110:intron | 45.0% |
| CATGCTATGAAGCACGGATA+CGG | - | chr6_1:95508736-95508755 | None:intergenic | 45.0% | |
| CTGACACATGCTATGAAGCA+CGG | - | chr6_1:95508742-95508761 | None:intergenic | 45.0% | |
| !!! | TTTTGAAGTAGGCCAGGCTT+AGG | - | chr6_1:95508875-95508894 | None:intergenic | 45.0% |
| ! | ACCAGGCCTTTAAAAAGGTC+AGG | - | chr6_1:95508953-95508972 | None:intergenic | 45.0% |
| ! | GCTTCACCAGGCCTTTAAAA+AGG | - | chr6_1:95508958-95508977 | None:intergenic | 45.0% |
| GTAGGCTCATAGATGTTCCT+AGG | - | chr6_1:95509017-95509036 | None:intergenic | 45.0% | |
| GCACTTACACTTCAGATGGA+AGG | - | chr6_1:95509695-95509714 | None:intergenic | 45.0% | |
| TGTGGCACTTACACTTCAGA+TGG | - | chr6_1:95509699-95509718 | None:intergenic | 45.0% | |
| AGAGCTTGATGTGTAGGTGT+TGG | + | chr6_1:95509728-95509747 | Msa0900110:intron | 45.0% | |
| !! | CTTGATGTGTAGGTGTTGGA+AGG | + | chr6_1:95509732-95509751 | Msa0900110:intron | 45.0% |
| TGTTGGACAGTGTCAGACAA+TGG | + | chr6_1:95509924-95509943 | Msa0900110:intron | 45.0% | |
| !! | TCCATAAGTGTCGGTGCTAT+AGG | + | chr6_1:95509955-95509974 | Msa0900110:intron | 45.0% |
| !! | CCATAAGTGTCGGTGCTATA+GGG | + | chr6_1:95509956-95509975 | Msa0900110:intron | 45.0% |
| ACCACTAATCCTACGGACAA+TGG | + | chr6_1:95510191-95510210 | Msa0900110:intron | 45.0% | |
| ACCATTGTCCGTAGGATTAG+TGG | - | chr6_1:95510195-95510214 | None:intergenic | 45.0% | |
| ACTAATCCTACGGACAATGG+TGG | + | chr6_1:95510194-95510213 | Msa0900110:intron | 45.0% | |
| TCTTATCCACCATTGTCCGT+AGG | - | chr6_1:95510203-95510222 | None:intergenic | 45.0% | |
| TGCAAGGTTGCACAGTATAG+AGG | + | chr6_1:95510491-95510510 | Msa0900110:intron | 45.0% | |
| GCAAGGTTGCACAGTATAGA+GGG | + | chr6_1:95510492-95510511 | Msa0900110:intron | 45.0% | |
| CCCACCAACACATATGAAGA+AGG | - | chr6_1:95510611-95510630 | None:intergenic | 45.0% | |
| ! | TCTTCATATGTGTTGGTGGG+TGG | + | chr6_1:95510611-95510630 | Msa0900110:intron | 45.0% |
| ! | TGTTGGTGGGTGGTTCTTTA+AGG | + | chr6_1:95510621-95510640 | Msa0900110:intron | 45.0% |
| !! | TGGGTGGTTCTTTAAGGTTG+AGG | + | chr6_1:95510627-95510646 | Msa0900110:intron | 45.0% |
| AACACTGCACTCTGCACATA+AGG | - | chr6_1:95511053-95511072 | None:intergenic | 45.0% | |
| TACGCTAAAAGCTAGCGGTT+TGG | - | chr6_1:95511528-95511547 | None:intergenic | 45.0% | |
| CCTGATACGCTAAAAGCTAG+CGG | - | chr6_1:95511533-95511552 | None:intergenic | 45.0% | |
| GGGTCTGTTTGGTATAGTGT+TGG | - | chr6_1:95511790-95511809 | None:intergenic | 45.0% | |
| GTGCAAACTTAGGGTCTGTT+TGG | - | chr6_1:95511801-95511820 | None:intergenic | 45.0% | |
| GCTAAGACAAGTGAAAGGCA+AGG | - | chr6_1:95511860-95511879 | None:intergenic | 45.0% | |
| GGATCCGACGTCAAAATTCT+AGG | - | chr6_1:95512059-95512078 | None:intergenic | 45.0% | |
| CCAAGACACAAACAGGGAAT+AGG | - | chr6_1:95512348-95512367 | None:intergenic | 45.0% | |
| CCTATTCCCTGTTTGTGTCT+TGG | + | chr6_1:95512345-95512364 | Msa0900110:three_prime_UTR | 45.0% | |
| !!! | TAGAGTGCAAAGGCTGGTTT+TGG | + | chr6_1:95512453-95512472 | Msa0900110:three_prime_UTR | 45.0% |
| !!! | TTTTTTTTTCAAATTATTAT+CGG | + | chr6_1:95508692-95508711 | Msa0900110:intron | 5.0% |
| !! | ATTAAAAATAAATATAAAGA+AGG | - | chr6_1:95510799-95510818 | None:intergenic | 5.0% |
| GCACTGTCACTCCTTCGATT+AGG | + | chr6_1:95508619-95508638 | Msa0900110:intron | 50.0% | |
| TCCTTCGATTAGGTGTGTCC+TGG | + | chr6_1:95508629-95508648 | Msa0900110:intron | 50.0% | |
| ACCAGGACACACCTAATCGA+AGG | - | chr6_1:95508633-95508652 | None:intergenic | 50.0% | |
| ! | ATTAGGGGTGGAAATGGGCT+AGG | + | chr6_1:95508829-95508848 | Msa0900110:intron | 50.0% |
| ACGAGTAATAGGCCAGACTC+AGG | - | chr6_1:95508906-95508925 | None:intergenic | 50.0% | |
| ! | GCCTGGCCTGACCTTTTTAA+AGG | + | chr6_1:95508944-95508963 | Msa0900110:intron | 50.0% |
| ! | GCCTTTAAAAAGGTCAGGCC+AGG | - | chr6_1:95508948-95508967 | None:intergenic | 50.0% |
| !! | GCCTGACCTTTTTAAAGGCC+TGG | + | chr6_1:95508949-95508968 | Msa0900110:intron | 50.0% |
| ATAGGCTTTCAGGCTTCACC+AGG | - | chr6_1:95508970-95508989 | None:intergenic | 50.0% | |
| !! | GGCCGAGCTAGGCTTTAAAT+AGG | + | chr6_1:95509342-95509361 | Msa0900110:intron | 50.0% |
| TGATCATTAGGGGTGGGAAC+AGG | - | chr6_1:95509399-95509418 | None:intergenic | 50.0% | |
| !! | CCCTATAGCACCGACACTTA+TGG | - | chr6_1:95509959-95509978 | None:intergenic | 50.0% |
| !! | GTCGGTGCTATAGGGTTAGA+TGG | + | chr6_1:95509964-95509983 | Msa0900110:intron | 50.0% |
| AATTTCTGCCACGTGTCACC+AGG | + | chr6_1:95510538-95510557 | Msa0900110:intron | 50.0% | |
| GAGGTAATCATCGATGGTGC+AGG | + | chr6_1:95510646-95510665 | Msa0900110:intron | 50.0% | |
| GTAATCATCGATGGTGCAGG+AGG | + | chr6_1:95510649-95510668 | Msa0900110:intron | 50.0% | |
| CAAGGCTTTCTTCTCAGCGT+CGG | - | chr6_1:95510732-95510751 | None:intergenic | 50.0% | |
| !!! | CCGCTAGCTTTTAGCGTATC+AGG | + | chr6_1:95511530-95511549 | Msa0900110:intron | 50.0% |
| CTAGGTAGCTGAGAAGCAGA+CGG | - | chr6_1:95512041-95512060 | None:intergenic | 50.0% | |
| TAAGGCGTGGACAAGTTGTC+AGG | + | chr6_1:95512099-95512118 | Msa0900110:CDS | 50.0% | |
| TATGTGCCTGCAGTCTCACT+TGG | - | chr6_1:95512134-95512153 | None:intergenic | 50.0% | |
| ! | ACGCACCGGCACAACAACAA+TGG | + | chr6_1:95508010-95508029 | Msa0900110:exon | 55.0% |
| !! | TGAGTTCGGTGTCTTCGACG+AGG | - | chr6_1:95508112-95508131 | None:intergenic | 55.0% |
| !! | AAGTGTCGGTGTCAGACACC+AGG | - | chr6_1:95508650-95508669 | None:intergenic | 55.0% |
| TGAAGCACGGATACGGACAC+CGG | - | chr6_1:95508729-95508748 | None:intergenic | 55.0% | |
| GGCTTAGGCCTTACAAAGCC+CGG | - | chr6_1:95508860-95508879 | None:intergenic | 55.0% | |
| ! | GGCTTTGTAAGGCCTAAGCC+TGG | + | chr6_1:95508860-95508879 | Msa0900110:intron | 55.0% |
| TAAACGAGCTAGGCCGAGCT+AGG | + | chr6_1:95509331-95509350 | Msa0900110:intron | 55.0% | |
| ! | GGAATTGCGTGTGTCGGTGT+TGG | + | chr6_1:95509907-95509926 | Msa0900110:intron | 55.0% |
| TCGGTGAGAACCTGATGTGG+AGG | - | chr6_1:95510713-95510732 | None:intergenic | 55.0% | |
| AGGCCTTACAAAGCCCGGCT+CGG | - | chr6_1:95508855-95508874 | None:intergenic | 60.0% | |
| GCCTATTAAGCTCGTCGGGC+CGG | - | chr6_1:95509239-95509258 | None:intergenic | 60.0% | |
| ATTAGGGGTGGGAACAGGCC+AGG | - | chr6_1:95509394-95509413 | None:intergenic | 60.0% | |
| GGTGCAGGAGGATGAACTGC+TGG | + | chr6_1:95510661-95510680 | Msa0900110:intron | 60.0% | |
| CGAACGCGTACCTCCACATC+AGG | + | chr6_1:95510700-95510719 | Msa0900110:CDS | 60.0% | |
| ! | GCGTCGGTGAGAACCTGATG+TGG | - | chr6_1:95510716-95510735 | None:intergenic | 60.0% |
| ATCCGGCCAAGTGAGACTGC+AGG | + | chr6_1:95512125-95512144 | Msa0900110:CDS | 60.0% | |
| TGCCTGCAGTCTCACTTGGC+CGG | - | chr6_1:95512130-95512149 | None:intergenic | 60.0% | |
| !! | GGAAATGGGCTAGGCCGAGC+CGG | + | chr6_1:95508838-95508857 | Msa0900110:intron | 65.0% |
| !! | GAAATGGGCTAGGCCGAGCC+GGG | + | chr6_1:95508839-95508858 | Msa0900110:intron | 65.0% |
| ! | AGGCCGAGCCGGGCTTTGTA+AGG | + | chr6_1:95508849-95508868 | Msa0900110:intron | 65.0% |
| GCCGGCCCGACGAGCTTAAT+AGG | + | chr6_1:95509235-95509254 | Msa0900110:intron | 65.0% | |
| GCTAGGCCATAGGCCCCTGT+CGG | + | chr6_1:95509364-95509383 | Msa0900110:intron | 65.0% | |
| GGCCATAGGCCCCTGTCGGA+CGG | + | chr6_1:95509368-95509387 | Msa0900110:intron | 70.0% | |
| ACAGGCCAGGCCGTCCGACA+GGG | - | chr6_1:95509381-95509400 | None:intergenic | 70.0% | |
| AACAGGCCAGGCCGTCCGAC+AGG | - | chr6_1:95509382-95509401 | None:intergenic | 70.0% | |
| GGCCGTCCGACAGGGGCCTA+TGG | - | chr6_1:95509373-95509392 | None:intergenic | 75.0% | |
| TAGGCCCCTGTCGGACGGCC+TGG | + | chr6_1:95509373-95509392 | Msa0900110:intron | 75.0% | |
| CAGGCCAGGCCGTCCGACAG+GGG | - | chr6_1:95509380-95509399 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 95507925 | 95512481 | 95507925 | ID=Msa0900110;Name=Msa0900110 |
| chr6_1 | mRNA | 95507925 | 95512481 | 95507925 | ID=Msa0900110-mRNA-1;Parent=Msa0900110;Name=Msa0900110-mRNA-1;_AED=0.24;_eAED=0.24;_QI=104|1|1|1|1|1|3|303|208 |
| chr6_1 | exon | 95507925 | 95508415 | 95507925 | ID=Msa0900110-mRNA-1:exon:16510;Parent=Msa0900110-mRNA-1 |
| chr6_1 | exon | 95510668 | 95510781 | 95510668 | ID=Msa0900110-mRNA-1:exon:16511;Parent=Msa0900110-mRNA-1 |
| chr6_1 | exon | 95512053 | 95512481 | 95512053 | ID=Msa0900110-mRNA-1:exon:16512;Parent=Msa0900110-mRNA-1 |
| chr6_1 | five_prime_UTR | 95507925 | 95508028 | 95507925 | ID=Msa0900110-mRNA-1:five_prime_utr;Parent=Msa0900110-mRNA-1 |
| chr6_1 | CDS | 95508029 | 95508415 | 95508029 | ID=Msa0900110-mRNA-1:cds;Parent=Msa0900110-mRNA-1 |
| chr6_1 | CDS | 95510668 | 95510781 | 95510668 | ID=Msa0900110-mRNA-1:cds;Parent=Msa0900110-mRNA-1 |
| chr6_1 | CDS | 95512053 | 95512178 | 95512053 | ID=Msa0900110-mRNA-1:cds;Parent=Msa0900110-mRNA-1 |
| chr6_1 | three_prime_UTR | 95512179 | 95512481 | 95512179 | ID=Msa0900110-mRNA-1:three_prime_utr;Parent=Msa0900110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
