Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0589440 | XP_003604587.1 | 99.776 | 447 | 1 | 0 | 1 | 447 | 1 | 447 | 0.0 | 919 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0589440 | sp|O49169|EF1A_MANES | 94.395 | 446 | 25 | 0 | 1 | 446 | 1 | 446 | 0.0 | 879 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0025060 | Msa0589440 | -0.803646 | 3.156133e-49 | -8.615850e-47 |
| Msa0030710 | Msa0589440 | -0.839108 | 1.929386e-57 | -8.615850e-47 |
| Msa0030740 | Msa0589440 | -0.801213 | 1.001258e-48 | -8.615850e-47 |
| Msa0032040 | Msa0589440 | -0.836871 | 7.256442e-57 | -8.615850e-47 |
| Msa0035090 | Msa0589440 | -0.831036 | 2.095416e-55 | -8.615850e-47 |
| Msa0040190 | Msa0589440 | -0.800974 | 1.120252e-48 | -8.615850e-47 |
| Msa0067820 | Msa0589440 | -0.814885 | 1.226491e-51 | -8.615850e-47 |
| Msa0083200 | Msa0589440 | -0.820026 | 8.523907e-53 | -8.615850e-47 |
| Msa0083570 | Msa0589440 | -0.815826 | 7.577008e-52 | -8.615850e-47 |
| Msa0087880 | Msa0589440 | -0.812273 | 4.605189e-51 | -8.615850e-47 |
| Msa0092750 | Msa0589440 | -0.809171 | 2.158978e-50 | -8.615850e-47 |
| Msa0093830 | Msa0589440 | -0.824889 | 6.319829e-54 | -8.615850e-47 |
| Msa0097490 | Msa0589440 | -0.806468 | 8.107173e-50 | -8.615850e-47 |
| Msa0114960 | Msa0589440 | -0.818251 | 2.160840e-52 | -8.615850e-47 |
| Msa0118250 | Msa0589440 | -0.816513 | 5.319525e-52 | -8.615850e-47 |
| Msa0128840 | Msa0589440 | -0.810453 | 1.144095e-50 | -8.615850e-47 |
| Msa0130120 | Msa0589440 | -0.827686 | 1.363966e-54 | -8.615850e-47 |
| Msa0134550 | Msa0589440 | -0.800289 | 1.545436e-48 | -8.615850e-47 |
| Msa0143360 | Msa0589440 | -0.822806 | 1.945348e-53 | -8.615850e-47 |
| Msa0152910 | Msa0589440 | 0.812905 | 3.350457e-51 | -8.615850e-47 |
| Msa0170690 | Msa0589440 | -0.810264 | 1.256961e-50 | -8.615850e-47 |
| Msa0170730 | Msa0589440 | -0.800514 | 1.390557e-48 | -8.615850e-47 |
| Msa0175900 | Msa0589440 | -0.811386 | 7.184450e-51 | -8.615850e-47 |
| Msa0177220 | Msa0589440 | 0.820180 | 7.860668e-53 | -8.615850e-47 |
| Msa0177450 | Msa0589440 | 0.811535 | 6.669779e-51 | -8.615850e-47 |
| Msa0186750 | Msa0589440 | -0.814552 | 1.453753e-51 | -8.615850e-47 |
| Msa0219140 | Msa0589440 | -0.821129 | 4.757713e-53 | -8.615850e-47 |
| Msa0222510 | Msa0589440 | -0.809770 | 1.605299e-50 | -8.615850e-47 |
| Msa0370350 | Msa0589440 | -0.805943 | 1.045777e-49 | -8.615850e-47 |
| Msa0370510 | Msa0589440 | -0.822600 | 2.172490e-53 | -8.615850e-47 |
| Msa0384130 | Msa0589440 | -0.818316 | 2.089162e-52 | -8.615850e-47 |
| Msa0420080 | Msa0589440 | -0.808530 | 2.960527e-50 | -8.615850e-47 |
| Msa0426990 | Msa0589440 | -0.802916 | 4.469505e-49 | -8.615850e-47 |
| Msa0451370 | Msa0589440 | -0.811656 | 6.277746e-51 | -8.615850e-47 |
| Msa0475830 | Msa0589440 | -0.811417 | 7.075852e-51 | -8.615850e-47 |
| Msa0478750 | Msa0589440 | -0.831283 | 1.822298e-55 | -8.615850e-47 |
| Msa0253410 | Msa0589440 | -0.808916 | 2.447473e-50 | -8.615850e-47 |
| Msa0258960 | Msa0589440 | -0.808535 | 2.952556e-50 | -8.615850e-47 |
| Msa0273710 | Msa0589440 | -0.802298 | 5.994963e-49 | -8.615850e-47 |
| Msa0301800 | Msa0589440 | -0.803265 | 3.785333e-49 | -8.615850e-47 |
| Msa0305810 | Msa0589440 | -0.812102 | 5.018559e-51 | -8.615850e-47 |
| Msa0307490 | Msa0589440 | -0.836010 | 1.202139e-56 | -8.615850e-47 |
| Msa0307750 | Msa0589440 | -0.808391 | 3.169003e-50 | -8.615850e-47 |
| Msa0331830 | Msa0589440 | -0.832636 | 8.442508e-56 | -8.615850e-47 |
| Msa0341710 | Msa0589440 | -0.825151 | 5.479976e-54 | -8.615850e-47 |
| Msa0522830 | Msa0589440 | -0.805017 | 1.635164e-49 | -8.615850e-47 |
| Msa0532310 | Msa0589440 | 0.809098 | 2.238196e-50 | -8.615850e-47 |
| Msa0545910 | Msa0589440 | -0.836663 | 8.199315e-57 | -8.615850e-47 |
| Msa0562740 | Msa0589440 | -0.807913 | 4.007117e-50 | -8.615850e-47 |
| Msa0564000 | Msa0589440 | -0.809949 | 1.469103e-50 | -8.615850e-47 |
| Msa0565930 | Msa0589440 | -0.815490 | 9.001979e-52 | -8.615850e-47 |
| Msa0574230 | Msa0589440 | -0.800783 | 1.225662e-48 | -8.615850e-47 |
| Msa0574450 | Msa0589440 | -0.812066 | 5.109713e-51 | -8.615850e-47 |
| Msa0576150 | Msa0589440 | -0.811677 | 6.212634e-51 | -8.615850e-47 |
| Msa0577140 | Msa0589440 | -0.834247 | 3.347602e-56 | -8.615850e-47 |
| Msa0577910 | Msa0589440 | -0.813480 | 2.505208e-51 | -8.615850e-47 |
| Msa0583810 | Msa0589440 | -0.800210 | 1.603903e-48 | -8.615850e-47 |
| Msa0587060 | Msa0589440 | -0.852764 | 3.725412e-61 | -8.615850e-47 |
| Msa0589440 | Msa0601710 | -0.836213 | 1.067743e-56 | -8.615850e-47 |
| Msa0589440 | Msa0619060 | -0.818066 | 2.380073e-52 | -8.615850e-47 |
| Msa0589440 | Msa0619170 | -0.803922 | 2.765735e-49 | -8.615850e-47 |
| Msa0589440 | Msa0624890 | -0.850323 | 1.828738e-60 | -8.615850e-47 |
| Msa0589440 | Msa0626890 | -0.833468 | 5.240961e-56 | -8.615850e-47 |
| Msa0589440 | Msa0629400 | 0.960583 | 1.011778e-118 | -8.615850e-47 |
| Msa0589440 | Msa0641970 | -0.815576 | 8.611281e-52 | -8.615850e-47 |
| Msa0589440 | Msa0659130 | -0.820192 | 7.810155e-53 | -8.615850e-47 |
| Msa0589440 | Msa0665010 | -0.857630 | 1.432252e-62 | -8.615850e-47 |
| Msa0589440 | Msa0667240 | 0.803898 | 2.798781e-49 | -8.615850e-47 |
| Msa0589440 | Msa0681040 | -0.832098 | 1.147385e-55 | -8.615850e-47 |
| Msa0589440 | Msa0704750 | -0.830371 | 3.049082e-55 | -8.615850e-47 |
| Msa0589440 | Msa0705610 | -0.832735 | 7.980269e-56 | -8.615850e-47 |
| Msa0589440 | Msa0708120 | -0.813278 | 2.775225e-51 | -8.615850e-47 |
| Msa0589440 | Msa0714160 | -0.802824 | 4.671306e-49 | -8.615850e-47 |
| Msa0589440 | Msa0716670 | -0.823854 | 1.107108e-53 | -8.615850e-47 |
| Msa0589440 | Msa0736330 | -0.805565 | 1.255448e-49 | -8.615850e-47 |
| Msa0589440 | Msa0742690 | -0.801691 | 7.990478e-49 | -8.615850e-47 |
| Msa0589440 | Msa0762390 | -0.807906 | 4.020273e-50 | -8.615850e-47 |
| Msa0589440 | Msa0762470 | -0.802437 | 5.613291e-49 | -8.615850e-47 |
| Msa0589440 | Msa0766880 | -0.808568 | 2.904946e-50 | -8.615850e-47 |
| Msa0589440 | Msa0811710 | -0.801801 | 7.585975e-49 | -8.615850e-47 |
| Msa0589440 | Msa0827560 | -0.811233 | 7.757822e-51 | -8.615850e-47 |
| Msa0589440 | Msa0855490 | -0.809299 | 2.026328e-50 | -8.615850e-47 |
| Msa0589440 | Msa0862750 | -0.811304 | 7.484517e-51 | -8.615850e-47 |
| Msa0589440 | Msa0910650 | -0.818928 | 1.517381e-52 | -8.615850e-47 |
| Msa0589440 | Msa0959970 | -0.814310 | 1.644685e-51 | -8.615850e-47 |
| Msa0589440 | Msa0970120 | -0.816887 | 4.385712e-52 | -8.615850e-47 |
| Msa0589440 | Msa0985570 | -0.812830 | 3.479257e-51 | -8.615850e-47 |
| Msa0589440 | Msa1041620 | -0.806621 | 7.527900e-50 | -8.615850e-47 |
| Msa0589440 | Msa1042380 | -0.821650 | 3.607805e-53 | -8.615850e-47 |
| Msa0589440 | Msa1082760 | -0.809232 | 2.095312e-50 | -8.615850e-47 |
| Msa0589440 | Msa1090230 | -0.803872 | 2.833454e-49 | -8.615850e-47 |
| Msa0589440 | Msa1125100 | -0.817584 | 3.056976e-52 | -8.615850e-47 |
| Msa0589440 | Msa1125150 | -0.821147 | 4.711612e-53 | -8.615850e-47 |
| Msa0589440 | Msa1166020 | -0.801270 | 9.744886e-49 | -8.615850e-47 |
| Msa0589440 | Msa1166520 | -0.803971 | 2.702600e-49 | -8.615850e-47 |
| Msa0589440 | Msa1198420 | -0.812753 | 3.617217e-51 | -8.615850e-47 |
| Msa0589440 | Msa1199690 | -0.813667 | 2.279581e-51 | -8.615850e-47 |
| Msa0589440 | Msa1203090 | -0.800885 | 1.168349e-48 | -8.615850e-47 |
| Msa0589440 | Msa1226330 | -0.816856 | 4.456801e-52 | -8.615850e-47 |
| Msa0589440 | Msa1235960 | -0.823262 | 1.522360e-53 | -8.615850e-47 |
| Msa0589440 | Msa1235990 | -0.819232 | 1.293895e-52 | -8.615850e-47 |
| Msa0589440 | Msa1252220 | -0.802893 | 4.519611e-49 | -8.615850e-47 |
| Msa0589440 | Msa1255500 | -0.800754 | 1.242549e-48 | -8.615850e-47 |
| Msa0589440 | Msa1264230 | -0.833144 | 6.311231e-56 | -8.615850e-47 |
| Msa0589440 | Msa1302920 | -0.834109 | 3.623949e-56 | -8.615850e-47 |
| Msa0589440 | Msa1316090 | -0.825854 | 3.735370e-54 | -8.615850e-47 |
| Msa0589440 | Msa1331900 | -0.815985 | 6.983698e-52 | -8.615850e-47 |
| Msa0589440 | Msa1351560 | -0.842316 | 2.786181e-58 | -8.615850e-47 |
| Msa0589440 | Msa1357760 | -0.805445 | 1.330105e-49 | -8.615850e-47 |
| Msa0589440 | Msa1370830 | -0.805507 | 1.291076e-49 | -8.615850e-47 |
| Msa0589440 | Msa1385940 | -0.835638 | 1.493186e-56 | -8.615850e-47 |
| Msa0589440 | Msa1389990 | -0.800576 | 1.350654e-48 | -8.615850e-47 |
| Msa0589440 | Msa1395700 | -0.805170 | 1.519412e-49 | -8.615850e-47 |
| Msa0589440 | Msa1396310 | -0.800026 | 1.748109e-48 | -8.615850e-47 |
| Msa0589440 | Msa1400600 | -0.812829 | 3.480925e-51 | -8.615850e-47 |
| Msa0589440 | Msa1415120 | -0.808069 | 3.712196e-50 | -8.615850e-47 |
| Msa0589440 | Msa1425110 | -0.804313 | 2.293247e-49 | -8.615850e-47 |
| Msa0589440 | Msa1430940 | -0.802479 | 5.501044e-49 | -8.615850e-47 |
| Msa0589440 | Msa1444750 | -0.800649 | 1.305380e-48 | -8.615850e-47 |
| Msa0589440 | Msa1455000 | -0.800746 | 1.247190e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0589440 | MtrunA17_Chr4g0005781 | 99.776 | 447 | 1 | 0 | 1 | 447 | 1 | 447 | 0.0 | 919 |
| Msa0589440 | MtrunA17_Chr1g0200071 | 96.429 | 448 | 15 | 1 | 1 | 447 | 1 | 448 | 0.0 | 891 |
| Msa0589440 | MtrunA17_Chr1g0200091 | 96.429 | 448 | 15 | 1 | 1 | 447 | 1 | 448 | 0.0 | 891 |
| Msa0589440 | MtrunA17_Chr1g0200121 | 96.205 | 448 | 16 | 1 | 1 | 447 | 1 | 448 | 0.0 | 890 |
| Msa0589440 | MtrunA17_Chr6g0458111 | 96.083 | 434 | 17 | 0 | 1 | 434 | 1 | 434 | 0.0 | 874 |
| Msa0589440 | MtrunA17_Chr6g0458091 | 96.083 | 434 | 17 | 0 | 1 | 434 | 1 | 434 | 0.0 | 874 |
| Msa0589440 | MtrunA17_Chr1g0150331 | 88.248 | 451 | 23 | 3 | 1 | 447 | 1 | 425 | 0.0 | 800 |
| Msa0589440 | MtrunA17_Chr1g0193591 | 82.258 | 434 | 77 | 0 | 1 | 434 | 1 | 434 | 0.0 | 743 |
| Msa0589440 | MtrunA17_Chr1g0204031 | 80.963 | 436 | 78 | 3 | 1 | 436 | 1 | 431 | 0.0 | 731 |
| Msa0589440 | MtrunA17_Chr1g0156421 | 78.802 | 434 | 92 | 0 | 1 | 434 | 1 | 434 | 0.0 | 726 |
| Msa0589440 | MtrunA17_Chr8g0340771 | 79.065 | 449 | 91 | 2 | 1 | 446 | 1 | 449 | 0.0 | 717 |
| Msa0589440 | MtrunA17_Chr5g0415391 | 72.475 | 396 | 109 | 0 | 39 | 434 | 1 | 396 | 0.0 | 595 |
| Msa0589440 | MtrunA17_Chr1g0196251 | 69.231 | 403 | 96 | 2 | 4 | 405 | 5 | 380 | 0.0 | 574 |
| Msa0589440 | MtrunA17_Chr8g0336511 | 78.287 | 327 | 70 | 1 | 1 | 326 | 66 | 392 | 0.0 | 543 |
| Msa0589440 | MtrunA17_Chr2g0319341 | 74.924 | 327 | 80 | 1 | 102 | 426 | 1 | 327 | 0.0 | 518 |
| Msa0589440 | MtrunA17_Chr2g0298371 | 68.923 | 325 | 82 | 2 | 102 | 424 | 1 | 308 | 7.84e-163 | 461 |
| Msa0589440 | MtrunA17_Chr8g0340371 | 69.710 | 241 | 70 | 2 | 1 | 240 | 1 | 239 | 2.10e-118 | 345 |
| Msa0589440 | MtrunA17_Chr1g0210931 | 61.074 | 298 | 61 | 4 | 155 | 446 | 1 | 249 | 8.19e-114 | 335 |
| Msa0589440 | MtrunA17_Chr2g0318291 | 71.239 | 226 | 60 | 3 | 1 | 223 | 1 | 224 | 5.35e-112 | 328 |
| Msa0589440 | MtrunA17_Chr6g0483121 | 38.173 | 427 | 256 | 5 | 5 | 426 | 89 | 512 | 1.09e-98 | 305 |
| Msa0589440 | MtrunA17_Chr8g0392641 | 37.500 | 432 | 260 | 6 | 4 | 429 | 143 | 570 | 2.84e-93 | 293 |
| Msa0589440 | MtrunA17_Chr1g0204041 | 86.452 | 155 | 21 | 0 | 1 | 155 | 1 | 155 | 1.09e-90 | 272 |
| Msa0589440 | MtrunA17_Chr8g0380091 | 36.000 | 425 | 264 | 5 | 7 | 426 | 275 | 696 | 1.34e-90 | 289 |
| Msa0589440 | MtrunA17_Chr1g0200111 | 74.576 | 177 | 35 | 1 | 264 | 430 | 1 | 177 | 3.22e-86 | 261 |
| Msa0589440 | MtrunA17_Chr2g0318281 | 65.672 | 201 | 63 | 1 | 243 | 443 | 5 | 199 | 1.88e-84 | 258 |
| Msa0589440 | MtrunA17_Chr1g0156411 | 81.429 | 140 | 26 | 0 | 6 | 145 | 10 | 149 | 8.67e-79 | 241 |
| Msa0589440 | MtrunA17_Chr8g0340361 | 61.957 | 184 | 54 | 2 | 264 | 432 | 1 | 183 | 9.06e-68 | 214 |
| Msa0589440 | MtrunA17_Chr4g0026961 | 54.124 | 194 | 73 | 4 | 195 | 385 | 32 | 212 | 6.84e-59 | 192 |
| Msa0589440 | MtrunA17_Chr4g0026961 | 76.190 | 42 | 10 | 0 | 1 | 42 | 1 | 42 | 6.43e-13 | 67.8 |
| Msa0589440 | MtrunA17_Chr2g0298381 | 77.778 | 99 | 22 | 0 | 1 | 99 | 1 | 99 | 6.12e-48 | 159 |
| Msa0589440 | MtrunA17_Chr8g0341021 | 76.471 | 102 | 24 | 0 | 3 | 104 | 4 | 105 | 1.16e-47 | 159 |
| Msa0589440 | MtrunA17_Chr7g0259481 | 30.137 | 438 | 246 | 14 | 3 | 429 | 59 | 447 | 5.24e-45 | 162 |
| Msa0589440 | MtrunA17_Chr3g0116821 | 29.730 | 444 | 251 | 15 | 3 | 429 | 88 | 487 | 8.78e-40 | 149 |
| Msa0589440 | MtrunA17_Chr1g0211481 | 79.747 | 79 | 16 | 0 | 5 | 83 | 4 | 82 | 3.42e-36 | 129 |
| Msa0589440 | MtrunA17_Chr2g0319351 | 82.192 | 73 | 13 | 0 | 5 | 77 | 5 | 77 | 3.79e-35 | 125 |
| Msa0589440 | MtrunA17_Chr1g0200101 | 87.692 | 65 | 8 | 0 | 172 | 236 | 49 | 113 | 1.38e-34 | 125 |
| Msa0589440 | MtrunA17_Chr1g0200101 | 73.469 | 49 | 13 | 0 | 21 | 69 | 2 | 50 | 8.34e-17 | 76.3 |
| Msa0589440 | MtrunA17_Chr2g0287231 | 32.389 | 247 | 135 | 6 | 1 | 244 | 10 | 227 | 4.53e-31 | 119 |
| Msa0589440 | MtrunA17_Chr8g0341041 | 35.047 | 214 | 76 | 5 | 213 | 426 | 2 | 152 | 7.31e-29 | 111 |
| Msa0589440 | MtrunA17_Chr7g0261801 | 68.182 | 66 | 18 | 1 | 155 | 220 | 1 | 63 | 7.90e-24 | 94.7 |
| Msa0589440 | MtrunA17_Chr3g0130991 | 26.471 | 272 | 143 | 9 | 9 | 272 | 85 | 307 | 4.52e-13 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0589440 | AT1G07920.1 | 93.946 | 446 | 27 | 0 | 1 | 446 | 1 | 446 | 0.0 | 877 |
| Msa0589440 | AT1G07940.4 | 93.946 | 446 | 27 | 0 | 1 | 446 | 1 | 446 | 0.0 | 877 |
| Msa0589440 | AT1G07940.1 | 93.946 | 446 | 27 | 0 | 1 | 446 | 1 | 446 | 0.0 | 877 |
| Msa0589440 | AT1G07940.2 | 93.946 | 446 | 27 | 0 | 1 | 446 | 1 | 446 | 0.0 | 877 |
| Msa0589440 | AT1G07940.3 | 93.946 | 446 | 27 | 0 | 1 | 446 | 1 | 446 | 0.0 | 877 |
| Msa0589440 | AT5G60390.3 | 93.946 | 446 | 27 | 0 | 1 | 446 | 1 | 446 | 0.0 | 877 |
| Msa0589440 | AT5G60390.1 | 93.946 | 446 | 27 | 0 | 1 | 446 | 1 | 446 | 0.0 | 877 |
| Msa0589440 | AT5G60390.2 | 93.946 | 446 | 27 | 0 | 1 | 446 | 1 | 446 | 0.0 | 877 |
| Msa0589440 | AT1G07930.1 | 93.946 | 446 | 27 | 0 | 1 | 446 | 1 | 446 | 0.0 | 877 |
| Msa0589440 | AT1G07930.2 | 98.039 | 255 | 5 | 0 | 1 | 255 | 1 | 255 | 0.0 | 528 |
| Msa0589440 | AT1G07930.2 | 86.207 | 116 | 16 | 0 | 331 | 446 | 254 | 369 | 1.70e-64 | 212 |
| Msa0589440 | AT1G18070.1 | 37.176 | 425 | 259 | 5 | 5 | 424 | 99 | 520 | 2.88e-95 | 297 |
| Msa0589440 | AT1G18070.2 | 37.176 | 425 | 259 | 5 | 5 | 424 | 99 | 520 | 2.88e-95 | 297 |
| Msa0589440 | AT1G18070.3 | 36.468 | 436 | 258 | 6 | 5 | 424 | 99 | 531 | 3.34e-92 | 289 |
| Msa0589440 | AT5G10630.1 | 35.529 | 425 | 266 | 5 | 7 | 426 | 239 | 660 | 7.86e-91 | 289 |
| Msa0589440 | AT5G10630.5 | 35.529 | 425 | 266 | 5 | 7 | 426 | 240 | 661 | 8.04e-91 | 289 |
| Msa0589440 | AT5G10630.2 | 35.529 | 425 | 266 | 5 | 7 | 426 | 240 | 661 | 8.04e-91 | 289 |
| Msa0589440 | AT5G10630.3 | 35.529 | 425 | 266 | 5 | 7 | 426 | 310 | 731 | 2.95e-90 | 290 |
| Msa0589440 | AT5G10630.4 | 35.529 | 425 | 266 | 5 | 7 | 426 | 315 | 736 | 3.88e-90 | 289 |
| Msa0589440 | AT1G35550.1 | 75.962 | 104 | 25 | 0 | 335 | 438 | 1 | 104 | 2.39e-51 | 169 |
| Msa0589440 | AT4G20360.1 | 30.575 | 435 | 253 | 10 | 3 | 426 | 75 | 471 | 3.06e-44 | 161 |
| Msa0589440 | AT4G20360.2 | 30.575 | 435 | 253 | 10 | 3 | 426 | 75 | 471 | 3.06e-44 | 161 |
| Msa0589440 | AT4G02930.1 | 29.841 | 439 | 247 | 15 | 3 | 429 | 63 | 452 | 4.52e-43 | 157 |
| Msa0589440 | AT2G31060.3 | 25.000 | 264 | 160 | 8 | 9 | 263 | 61 | 295 | 4.34e-12 | 68.6 |
| Msa0589440 | AT5G39900.1 | 25.839 | 298 | 158 | 8 | 4 | 288 | 64 | 311 | 6.58e-12 | 68.2 |
| Msa0589440 | AT5G08650.2 | 26.518 | 313 | 172 | 13 | 9 | 311 | 88 | 352 | 1.17e-11 | 67.4 |
| Msa0589440 | AT5G08650.1 | 26.518 | 313 | 172 | 13 | 9 | 311 | 88 | 352 | 1.24e-11 | 67.4 |
| Msa0589440 | AT2G31060.2 | 24.615 | 260 | 162 | 7 | 9 | 263 | 61 | 291 | 5.58e-11 | 65.1 |
Find 155 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCACGGTTCATTTCTTCT+TGG | 0.216911 | 4_2:+12314924 | None:intergenic |
| GCTCTCCTTGCTTTCACTCT+TGG | 0.289982 | 4_2:-12315946 | Msa0589440:CDS |
| TGTGATGTTTAAATCTTTGC+AGG | 0.305075 | 4_2:-12314598 | Msa0589440:three_prime_UTR |
| ATCTCCATTCTTCAGGAACT+TGG | 0.311336 | 4_2:+12315119 | None:intergenic |
| GTCTACAAGATTGGAGGAAT+TGG | 0.315206 | 4_2:-12315534 | Msa0589440:CDS |
| AAGTTAGCAGCCTCCTTGGC+TGG | 0.316454 | 4_2:+12315294 | None:intergenic |
| ACTTGCTGCTTGTAAAATTC+AGG | 0.324391 | 4_2:+12314682 | None:intergenic |
| CACATTAACATTGTTGTCAT+TGG | 0.329838 | 4_2:-12316336 | Msa0589440:CDS |
| TTCATTAAGAACATGATTAC+TGG | 0.336870 | 4_2:-12316063 | Msa0589440:CDS |
| ATATTTGTGTGTTTATTCCT+TGG | 0.348874 | 4_2:-12314623 | Msa0589440:three_prime_UTR |
| AGAATGAGAGTGGAGTAAAC+AGG | 0.349142 | 4_2:+12317620 | None:intergenic |
| TCTCTCACTGAGGCACTTCC+CGG | 0.352595 | 4_2:-12315399 | Msa0589440:CDS |
| TACCAGCATCTCCATTCTTC+AGG | 0.357413 | 4_2:+12315112 | None:intergenic |
| CTCCTTGGCTGGGTCATCCT+TGG | 0.371796 | 4_2:+12315305 | None:intergenic |
| TCATTCTCTTCCTTGCTGCT+AGG | 0.372496 | 4_2:-12317604 | Msa0589440:five_prime_UTR |
| GCAAAAGTCACCACCATTCC+AGG | 0.373840 | 4_2:+12315471 | None:intergenic |
| ACTAAGATTGACAGGCGTTC+TGG | 0.379305 | 4_2:-12315162 | Msa0589440:CDS |
| AGAGATTGATTTACCTTTGA+AGG | 0.383102 | 4_2:+12317569 | None:intergenic |
| TGCGTCAAACTGTGGCTGTT+GGG | 0.385555 | 4_2:-12315005 | Msa0589440:CDS |
| GTCATTGGCCATGTCGACTC+TGG | 0.395247 | 4_2:-12316321 | Msa0589440:CDS |
| CACCACCATTCCAGGTTTCA+TGG | 0.400023 | 4_2:+12315479 | None:intergenic |
| ATTCCATTCGTTCCCATCTC+TGG | 0.404373 | 4_2:-12315693 | Msa0589440:CDS |
| ATCTCATTGCCCAGAATGTC+AGG | 0.419436 | 4_2:-12314550 | Msa0589440:three_prime_UTR |
| ATACCTGCTCTTGGAATACT+TGG | 0.419677 | 4_2:+12315776 | None:intergenic |
| AAGGACAATGGGTAAGGAAA+AGG | 0.424225 | 4_2:-12316361 | Msa0589440:exon |
| ATGAATCACCCTGGCCAGAT+TGG | 0.425183 | 4_2:-12315252 | Msa0589440:CDS |
| TTCACGGGTCTGACCATCCT+TGG | 0.425447 | 4_2:+12315972 | None:intergenic |
| CTCATCATTGACTCCACTAC+TGG | 0.425797 | 4_2:-12316015 | Msa0589440:CDS |
| ATAGCCAACCTTCTTCATAT+AGG | 0.426065 | 4_2:+12315728 | None:intergenic |
| CTTAATGAAATCCCTGTGTC+CGG | 0.429384 | 4_2:+12316077 | None:intergenic |
| AATTTCATCATACCTGCTCT+TGG | 0.430266 | 4_2:+12315767 | None:intergenic |
| GGCTTGTCTGATGGCCTCTT+AGG | 0.432559 | 4_2:+12315579 | None:intergenic |
| CACCCTGGCCAGATTGGAAA+TGG | 0.432985 | 4_2:-12315246 | Msa0589440:CDS |
| GCCCCTCCGACTACCACTTC+AGG | 0.433104 | 4_2:-12315559 | Msa0589440:CDS |
| GAGGTGTGGCAGTCAAGCAC+AGG | 0.434332 | 4_2:+12315216 | None:intergenic |
| CATTCTCTTCCTTGCTGCTA+GGG | 0.439255 | 4_2:-12317603 | Msa0589440:five_prime_UTR |
| GGGCATAGCCATTTCCAATC+TGG | 0.448022 | 4_2:+12315238 | None:intergenic |
| AGCGTTCATTCAAGTATGCT+TGG | 0.450783 | 4_2:-12316203 | Msa0589440:CDS |
| TGTGGCTGTTGGGGTTATCA+AGG | 0.455009 | 4_2:-12314995 | Msa0589440:CDS |
| CTTCAGGATGTCTACAAGAT+TGG | 0.458119 | 4_2:-12315543 | Msa0589440:CDS |
| TTAGTTATCTTAACAGTGCC+AGG | 0.458448 | 4_2:+12314955 | None:intergenic |
| GCGTTCATTCAAGTATGCTT+GGG | 0.461276 | 4_2:-12316202 | Msa0589440:CDS |
| AGTCTCAACAACCATGGGCT+TGG | 0.462350 | 4_2:+12315071 | None:intergenic |
| CTCAACAACCATGGGCTTGG+TGG | 0.464097 | 4_2:+12315074 | None:intergenic |
| TTAATGAAATCCCTGTGTCC+GGG | 0.473933 | 4_2:+12316078 | None:intergenic |
| TAGCCATTTCCAATCTGGCC+AGG | 0.474048 | 4_2:+12315243 | None:intergenic |
| ATCAAATCAATGAGCCTAAG+AGG | 0.476814 | 4_2:-12315593 | Msa0589440:CDS |
| TGTGAAGTTAGCAGCCTCCT+TGG | 0.480074 | 4_2:+12315290 | None:intergenic |
| TACAAATCTTGACTGGTACA+AGG | 0.490199 | 4_2:-12315640 | Msa0589440:CDS |
| GAGCCCAAGTTCCTGAAGAA+TGG | 0.491587 | 4_2:-12315123 | Msa0589440:CDS |
| AGTCGGAGGGGCTTGTCTGA+TGG | 0.496444 | 4_2:+12315570 | None:intergenic |
| ATCTCCCTCAAAACCAGAGA+TGG | 0.496573 | 4_2:+12315680 | None:intergenic |
| GATTGACAGGCGTTCTGGTA+AGG | 0.497183 | 4_2:-12315157 | Msa0589440:CDS |
| AGCTTGTTACTAAGATTGAC+AGG | 0.504274 | 4_2:-12315170 | Msa0589440:CDS |
| TGGGTCATCCTTGGTGTTTG+AGG | 0.504620 | 4_2:+12315314 | None:intergenic |
| CTTGGAATACTTGGGTGTAG+TGG | 0.514389 | 4_2:+12315785 | None:intergenic |
| TGAGAACAGCACAATCAGCT+TGG | 0.516820 | 4_2:+12316034 | None:intergenic |
| GAGAACAGCACAATCAGCTT+GGG | 0.517298 | 4_2:+12316035 | None:intergenic |
| TATCAAGGGTGTGGAGAAGA+AGG | 0.517386 | 4_2:-12314980 | Msa0589440:CDS |
| ACTTCAGTTTGCAGTCCAGT+TGG | 0.517541 | 4_2:+12315447 | None:intergenic |
| GAATGAGAGTGGAGTAAACA+GGG | 0.517732 | 4_2:+12317621 | None:intergenic |
| CAAGAGCCTCAAGAAGTGTT+GGG | 0.518886 | 4_2:+12315616 | None:intergenic |
| ATTAAATCCCACATTGTCAC+CGG | 0.519224 | 4_2:+12315380 | None:intergenic |
| TGTTAAGAATGTTTCTGTCA+AGG | 0.521267 | 4_2:-12315358 | Msa0589440:CDS |
| CAGGATGTCTACAAGATTGG+AGG | 0.523217 | 4_2:-12315540 | Msa0589440:CDS |
| TCTCCATTCTTCAGGAACTT+GGG | 0.527363 | 4_2:+12315120 | None:intergenic |
| TTGCTTTCACTCTTGGTGTG+AGG | 0.528420 | 4_2:-12315939 | Msa0589440:CDS |
| TTCCTGAAGAATGGAGATGC+TGG | 0.528428 | 4_2:-12315114 | Msa0589440:CDS |
| AGTTTCATCCTATATGAAGA+AGG | 0.530606 | 4_2:-12315736 | Msa0589440:CDS |
| TCAAGAGCCTCAAGAAGTGT+TGG | 0.532468 | 4_2:+12315615 | None:intergenic |
| CTCAAGGCTGAGCGTGAAAG+AGG | 0.533500 | 4_2:-12316168 | Msa0589440:CDS |
| AGTTAGCAGCCTCCTTGGCT+GGG | 0.535132 | 4_2:+12315295 | None:intergenic |
| TCATTGGCCATGTCGACTCT+GGG | 0.536467 | 4_2:-12316320 | Msa0589440:CDS |
| AGCAAACTTGACAGCAATGT+GGG | 0.541075 | 4_2:+12315194 | None:intergenic |
| CCAGTCTCAACACGTCCGAC+AGG | 0.541163 | 4_2:+12315504 | None:intergenic |
| CCTGTCGGACGTGTTGAGAC+TGG | 0.541718 | 4_2:-12315504 | Msa0589440:CDS |
| AGCTTCAAAACCACCAGTAG+TGG | 0.543721 | 4_2:+12316002 | None:intergenic |
| TTCTCTGAATATCCTCCACT+TGG | 0.543785 | 4_2:-12315048 | Msa0589440:CDS |
| AGGTGTGGCAGTCAAGCACA+GGG | 0.544526 | 4_2:+12315217 | None:intergenic |
| TGCACTGTCATTGATGCCCC+CGG | 0.544718 | 4_2:-12316096 | Msa0589440:CDS |
| TCATCCTATATGAAGAAGGT+TGG | 0.544820 | 4_2:-12315732 | Msa0589440:CDS |
| CACTTGATCTACAAGCTTGG+AGG | 0.545798 | 4_2:-12316279 | Msa0589440:CDS |
| CAAGAAGAAATGAACCGTGC+AGG | 0.548923 | 4_2:-12314923 | Msa0589440:exon |
| ATCATTGACTCCACTACTGG+TGG | 0.550177 | 4_2:-12316012 | Msa0589440:CDS |
| GGTCACTTGATCTACAAGCT+TGG | 0.555547 | 4_2:-12316282 | Msa0589440:CDS |
| ATGCGTCAAACTGTGGCTGT+TGG | 0.557227 | 4_2:-12315006 | Msa0589440:CDS |
| GAAGCTGGTATTTCCAAGGA+TGG | 0.557613 | 4_2:-12315985 | Msa0589440:CDS |
| TCAACAACCATGGGCTTGGT+GGG | 0.557624 | 4_2:+12315075 | None:intergenic |
| AAGCAAGGAGAGCATGTTCA+CGG | 0.559179 | 4_2:+12315956 | None:intergenic |
| TGTTGGGGTTATCAAGGGTG+TGG | 0.563472 | 4_2:-12314989 | Msa0589440:CDS |
| GCATATCTCTGACAGCAAAA+CGG | 0.563498 | 4_2:+12315025 | None:intergenic |
| ACAAATCTTGACTGGTACAA+GGG | 0.563768 | 4_2:-12315639 | Msa0589440:CDS |
| GTGGCTGTTGGGGTTATCAA+GGG | 0.565604 | 4_2:-12314994 | Msa0589440:CDS |
| CAGGTATGATGAAATTGTGA+AGG | 0.569288 | 4_2:-12315760 | Msa0589440:CDS |
| TCTGGGAAGTCAACTACCAC+TGG | 0.570179 | 4_2:-12316303 | Msa0589440:CDS |
| TAATGAAATCCCTGTGTCCG+GGG | 0.570266 | 4_2:+12316079 | None:intergenic |
| CACCCAAGTATTCCAAGAGC+AGG | 0.570501 | 4_2:-12315779 | Msa0589440:CDS |
| TTGGGTTCTTGACAAGCTCA+AGG | 0.572280 | 4_2:-12316184 | Msa0589440:CDS |
| AGCAAGGAGAGCATGTTCAC+GGG | 0.572470 | 4_2:+12315957 | None:intergenic |
| ATCCTGAAGTGGTAGTCGGA+GGG | 0.576252 | 4_2:+12315557 | None:intergenic |
| GATGATTCCCACCAAGCCCA+TGG | 0.580619 | 4_2:-12315082 | Msa0589440:CDS |
| AAACCAGAGATGGGAACGAA+TGG | 0.584939 | 4_2:+12315690 | None:intergenic |
| TGAAGGGTTTATATATAGTG+CGG | 0.585430 | 4_2:+12317652 | None:intergenic |
| GCGTCAAACTGTGGCTGTTG+GGG | 0.590275 | 4_2:-12315004 | Msa0589440:CDS |
| CACCAAGGATGACCCAGCCA+AGG | 0.594197 | 4_2:-12315307 | Msa0589440:CDS |
| GTGATGTTTAAATCTTTGCA+GGG | 0.596862 | 4_2:-12314597 | Msa0589440:three_prime_UTR |
| GAGAAAGTCTCAACAACCAT+GGG | 0.598729 | 4_2:+12315066 | None:intergenic |
| TTGACTTCCCAGAGTCGACA+TGG | 0.600770 | 4_2:+12316313 | None:intergenic |
| TTGACAAGCGTGTGATCGAG+AGG | 0.602725 | 4_2:-12316254 | Msa0589440:CDS |
| GGCACTTCCCGGTGACAATG+TGG | 0.604709 | 4_2:-12315388 | Msa0589440:CDS |
| TCTCCCTCAAAACCAGAGAT+GGG | 0.607478 | 4_2:+12315681 | None:intergenic |
| TCCTGAAGTGGTAGTCGGAG+GGG | 0.608492 | 4_2:+12315558 | None:intergenic |
| GAACAAAAGCTTAGAGATGA+CGG | 0.609468 | 4_2:+12314787 | None:intergenic |
| AGCGCTCTACAAATCTTGAC+TGG | 0.610562 | 4_2:-12315647 | Msa0589440:CDS |
| GGTGTGGAGAAGAAGGAACC+TGG | 0.612825 | 4_2:-12314973 | Msa0589440:CDS |
| AGAGAAAGTCTCAACAACCA+TGG | 0.614767 | 4_2:+12315065 | None:intergenic |
| GCACTTCCCGGTGACAATGT+GGG | 0.616830 | 4_2:-12315387 | Msa0589440:CDS |
| GCAAACTGAAGTCAAGTCTG+TGG | 0.619692 | 4_2:-12315436 | Msa0589440:CDS |
| TCACACCAAGAGTGAAAGCA+AGG | 0.621193 | 4_2:+12315941 | None:intergenic |
| ATCTTGTAGACATCCTGAAG+TGG | 0.621388 | 4_2:+12315546 | None:intergenic |
| CAAGGGCCCAACACTTCTTG+AGG | 0.622743 | 4_2:-12315622 | Msa0589440:CDS |
| AGCCATTTCCAATCTGGCCA+GGG | 0.623271 | 4_2:+12315244 | None:intergenic |
| AAACAGGGATACAAAGTGAA+GGG | 0.623909 | 4_2:+12317636 | None:intergenic |
| ACAGCAAAACGGCCAAGTGG+AGG | 0.624787 | 4_2:+12315036 | None:intergenic |
| TACCTGCTCTTGGAATACTT+GGG | 0.632334 | 4_2:+12315777 | None:intergenic |
| AGCAAGGAAGAGAATGAGAG+TGG | 0.632553 | 4_2:+12317610 | None:intergenic |
| GCGCTAAAACCCTAGCAGCA+AGG | 0.632990 | 4_2:+12317594 | None:intergenic |
| GGAATTGGAACTGTTCCTGT+CGG | 0.634263 | 4_2:-12315519 | Msa0589440:CDS |
| CATCCTGAAGTGGTAGTCGG+AGG | 0.637451 | 4_2:+12315556 | None:intergenic |
| AGACATCCTGAAGTGGTAGT+CGG | 0.638051 | 4_2:+12315553 | None:intergenic |
| CAGCAAACTTGACAGCAATG+TGG | 0.638328 | 4_2:+12315193 | None:intergenic |
| AGAACTGGGTTCTAGATCGA+CGG | 0.639454 | 4_2:-12314762 | Msa0589440:three_prime_UTR |
| TAAACAGGGATACAAAGTGA+AGG | 0.640510 | 4_2:+12317635 | None:intergenic |
| GAGACTGGTACCATGAAACC+TGG | 0.643102 | 4_2:-12315489 | Msa0589440:CDS |
| AATGATCTGCTGCTGCAACA+AGG | 0.643325 | 4_2:-12315914 | Msa0589440:intron |
| TGACAGCAATGTGGGAGGTG+TGG | 0.650950 | 4_2:+12315202 | None:intergenic |
| AATGAAATCCCTGTGTCCGG+GGG | 0.661737 | 4_2:+12316080 | None:intergenic |
| TCTGTCAAGGATCTCAAGCG+TGG | 0.663761 | 4_2:-12315345 | Msa0589440:CDS |
| TTAAATCCCACATTGTCACC+GGG | 0.665158 | 4_2:+12315381 | None:intergenic |
| CAGAGATATGCGTCAAACTG+TGG | 0.666313 | 4_2:-12315013 | Msa0589440:CDS |
| CAAGGATGACCCAGCCAAGG+AGG | 0.668893 | 4_2:-12315304 | Msa0589440:CDS |
| TTCTGGTAAGGAGATCGAGA+AGG | 0.668930 | 4_2:-12315145 | Msa0589440:CDS |
| GATTTAAACATCACACACCA+AGG | 0.670259 | 4_2:+12314606 | None:intergenic |
| CTGACAGCAAAACGGCCAAG+TGG | 0.679918 | 4_2:+12315033 | None:intergenic |
| GTGATTATCATGAATCACCC+TGG | 0.681230 | 4_2:-12315261 | Msa0589440:CDS |
| TACCATGAAACCTGGAATGG+TGG | 0.682936 | 4_2:-12315481 | Msa0589440:CDS |
| CTTGTAGATCAAGTGACCAG+TGG | 0.695213 | 4_2:+12316287 | None:intergenic |
| AAACTTGACAGCAATGTGGG+AGG | 0.695398 | 4_2:+12315197 | None:intergenic |
| TCACAATTGACATTGCTCTG+TGG | 0.708352 | 4_2:-12316143 | Msa0589440:CDS |
| TGATGTTTAAATCTTTGCAG+GGG | 0.709762 | 4_2:-12314596 | Msa0589440:three_prime_UTR |
| TGGTACCATGAAACCTGGAA+TGG | 0.712415 | 4_2:-12315484 | Msa0589440:CDS |
| ACTGGGTTCTAGATCGACGG+TGG | 0.727144 | 4_2:-12314759 | Msa0589440:three_prime_UTR |
| GGTGTGGCAGTCAAGCACAG+GGG | 0.731105 | 4_2:+12315218 | None:intergenic |
| TTATGTTGCCTCAAACACCA+AGG | 0.751394 | 4_2:-12315322 | Msa0589440:CDS |
| GCATCATGAATCTCTCACTG+AGG | 0.754777 | 4_2:-12315409 | Msa0589440:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTCATATGAAAAATTT+TGG | - | chr4_2:12314916-12314935 | Msa0589440:exon | 10.0% |
| !!! | TATTTCATATGAAAAATTTT+GGG | - | chr4_2:12314917-12314936 | Msa0589440:exon | 10.0% |
| !!! | ATAGTTGTTATTACAATAAA+TGG | - | chr4_2:12317332-12317351 | Msa0589440:intron | 15.0% |
| !! | ATTCAGAATCAAAATTAAAC+AGG | + | chr4_2:12314854-12314873 | None:intergenic | 20.0% |
| !! | TACAATACATTCAAATTTGA+TGG | + | chr4_2:12315069-12315088 | None:intergenic | 20.0% |
| !!! | TTTTACTTCATATGTTGAAT+TGG | - | chr4_2:12315150-12315169 | Msa0589440:CDS | 20.0% |
| !!! | TTTTACTTATGTACTGTTAA+TGG | - | chr4_2:12315539-12315558 | Msa0589440:CDS | 20.0% |
| !!! | TCATGATTTATTTTTGAATC+AGG | - | chr4_2:12315691-12315710 | Msa0589440:CDS | 20.0% |
| !!! | TTTGTGATTTTAAGCTTTTA+AGG | - | chr4_2:12315831-12315850 | Msa0589440:intron | 20.0% |
| !! | TAATCTAATGCAACTAAATA+GGG | + | chr4_2:12316350-12316369 | None:intergenic | 20.0% |
| !! | ATAATCTAATGCAACTAAAT+AGG | + | chr4_2:12316351-12316370 | None:intergenic | 20.0% |
| !! | TTATTACAATAAATGGTTTG+TGG | - | chr4_2:12317339-12317358 | Msa0589440:intron | 20.0% |
| ! | CTATGTAATCAGAAATGAAT+GGG | + | chr4_2:12314702-12314721 | None:intergenic | 25.0% |
| ! | TCTATGTAATCAGAAATGAA+TGG | + | chr4_2:12314703-12314722 | None:intergenic | 25.0% |
| !!! | TTCAATTTTGTTTACGATTC+TGG | - | chr4_2:12314788-12314807 | Msa0589440:three_prime_UTR | 25.0% |
| !! | TAATCGTTTATGAGTTGAAT+TGG | - | chr4_2:12314887-12314906 | Msa0589440:intron | 25.0% |
| !!! | GTGTTTTTGTTTCATTATTC+TGG | - | chr4_2:12315243-12315262 | Msa0589440:CDS | 25.0% |
| ! | GTGAGAAAATTGTCATTATT+CGG | - | chr4_2:12315265-12315284 | Msa0589440:CDS | 25.0% |
| ! | TTAAACTTGAATTGTTGACA+TGG | - | chr4_2:12315423-12315442 | Msa0589440:CDS | 25.0% |
| ! | AATCTATTATTCTTGAGTTC+TGG | - | chr4_2:12315510-12315529 | Msa0589440:CDS | 25.0% |
| ! | ATCTATTATTCTTGAGTTCT+GGG | - | chr4_2:12315511-12315530 | Msa0589440:CDS | 25.0% |
| ! | ATGAACATCATAACATATGA+TGG | - | chr4_2:12315645-12315664 | Msa0589440:CDS | 25.0% |
| !!! | TGTTGTTTTCTTTCTTGAAT+TGG | - | chr4_2:12315800-12315819 | Msa0589440:intron | 25.0% |
| !!! | TTTTAAGCTTTTAAGGACAA+TGG | - | chr4_2:12315838-12315857 | Msa0589440:intron | 25.0% |
| !!! | TTTAAGCTTTTAAGGACAAT+GGG | - | chr4_2:12315839-12315858 | Msa0589440:intron | 25.0% |
| ! | TTCATTAAGAACATGATTAC+TGG | - | chr4_2:12316148-12316167 | Msa0589440:CDS | 25.0% |
| ! | AATCTAATGCAACTAAATAG+GGG | + | chr4_2:12316349-12316368 | None:intergenic | 25.0% |
| !! | TTTTTGATATCTTGAACAGA+TGG | - | chr4_2:12316400-12316419 | Msa0589440:intron | 25.0% |
| !!! | TGTCTTGTTAAGTTGTTTTT+CGG | - | chr4_2:12317382-12317401 | Msa0589440:intron | 25.0% |
| ! | GATATTAAAAACAAATCAGC+AGG | + | chr4_2:12317562-12317581 | None:intergenic | 25.0% |
| ! | ATATTTGTGTGTTTATTCCT+TGG | - | chr4_2:12317588-12317607 | Msa0589440:five_prime_UTR | 25.0% |
| TGAAGGGTTTATATATAGTG+CGG | + | chr4_2:12314562-12314581 | None:intergenic | 30.0% | |
| ! | AGAGATTGATTTACCTTTGA+AGG | + | chr4_2:12314645-12314664 | None:intergenic | 30.0% |
| ATGTGACTTAGAAACGAAAA+AGG | + | chr4_2:12314668-12314687 | None:intergenic | 30.0% | |
| TATCGCAACTGAAAAACATT+AGG | + | chr4_2:12314956-12314975 | None:intergenic | 30.0% | |
| ! | TTGCGATACTGAAGTTATTT+TGG | - | chr4_2:12314968-12314987 | Msa0589440:CDS | 30.0% |
| !! | TGCGATACTGAAGTTATTTT+GGG | - | chr4_2:12314969-12314988 | Msa0589440:CDS | 30.0% |
| AGAAAATTGTCATTATTCGG+TGG | - | chr4_2:12315268-12315287 | Msa0589440:CDS | 30.0% | |
| ! | TTATTCGGTGGCAATATTAT+CGG | - | chr4_2:12315280-12315299 | Msa0589440:CDS | 30.0% |
| GATCTATCGAATCAAAACAT+AGG | + | chr4_2:12315455-12315474 | None:intergenic | 30.0% | |
| !! | AATTTAAGCTTAAGCACTGA+GGG | - | chr4_2:12315582-12315601 | Msa0589440:CDS | 30.0% |
| ATTAGTCGATTAAGACACAA+GGG | + | chr4_2:12315738-12315757 | None:intergenic | 30.0% | |
| CACATTAACATTGTTGTCAT+TGG | - | chr4_2:12315875-12315894 | Msa0589440:intron | 30.0% | |
| AGTTTCATCCTATATGAAGA+AGG | - | chr4_2:12316475-12316494 | Msa0589440:intron | 30.0% | |
| ! | GAACGAATGGAATTTTATCT+GGG | + | chr4_2:12316511-12316530 | None:intergenic | 30.0% |
| ! | TGTTAAGAATGTTTCTGTCA+AGG | - | chr4_2:12316853-12316872 | Msa0589440:intron | 30.0% |
| TGTGATGTTTAAATCTTTGC+AGG | - | chr4_2:12317613-12317632 | Msa0589440:five_prime_UTR | 30.0% | |
| GTGATGTTTAAATCTTTGCA+GGG | - | chr4_2:12317614-12317633 | Msa0589440:five_prime_UTR | 30.0% | |
| TGATGTTTAAATCTTTGCAG+GGG | - | chr4_2:12317615-12317634 | Msa0589440:five_prime_UTR | 30.0% | |
| AAACAGGGATACAAAGTGAA+GGG | + | chr4_2:12314578-12314597 | None:intergenic | 35.0% | |
| TAAACAGGGATACAAAGTGA+AGG | + | chr4_2:12314579-12314598 | None:intergenic | 35.0% | |
| CGATTCTGGTATGATAATCA+TGG | - | chr4_2:12314815-12314834 | Msa0589440:intron | 35.0% | |
| ! | GAATTTAAGCTTAAGCACTG+AGG | - | chr4_2:12315581-12315600 | Msa0589440:CDS | 35.0% |
| CATTAGTCGATTAAGACACA+AGG | + | chr4_2:12315739-12315758 | None:intergenic | 35.0% | |
| !!! | TTTTGAAGCTGGTATTTCCA+AGG | - | chr4_2:12316222-12316241 | Msa0589440:CDS | 35.0% |
| AATTTCATCATACCTGCTCT+TGG | + | chr4_2:12316447-12316466 | None:intergenic | 35.0% | |
| CAGGTATGATGAAATTGTGA+AGG | - | chr4_2:12316451-12316470 | Msa0589440:intron | 35.0% | |
| TCATCCTATATGAAGAAGGT+TGG | - | chr4_2:12316479-12316498 | Msa0589440:intron | 35.0% | |
| ATAGCCAACCTTCTTCATAT+AGG | + | chr4_2:12316486-12316505 | None:intergenic | 35.0% | |
| ! | GGAACGAATGGAATTTTATC+TGG | + | chr4_2:12316512-12316531 | None:intergenic | 35.0% |
| TACAAATCTTGACTGGTACA+AGG | - | chr4_2:12316571-12316590 | Msa0589440:intron | 35.0% | |
| ACAAATCTTGACTGGTACAA+GGG | - | chr4_2:12316572-12316591 | Msa0589440:intron | 35.0% | |
| ATCAAATCAATGAGCCTAAG+AGG | - | chr4_2:12316618-12316637 | Msa0589440:intron | 35.0% | |
| ATTAAATCCCACATTGTCAC+CGG | + | chr4_2:12316834-12316853 | None:intergenic | 35.0% | |
| !! | AGCTTGTTACTAAGATTGAC+AGG | - | chr4_2:12317041-12317060 | Msa0589440:intron | 35.0% |
| TTAGTTATCTTAACAGTGCC+AGG | + | chr4_2:12317259-12317278 | None:intergenic | 35.0% | |
| GAACAAAAGCTTAGAGATGA+CGG | + | chr4_2:12317427-12317446 | None:intergenic | 35.0% | |
| ! | TAAGCTTTTGTTCTCAGAAC+TGG | - | chr4_2:12317434-12317453 | Msa0589440:intron | 35.0% |
| ! | AAGCTTTTGTTCTCAGAACT+GGG | - | chr4_2:12317435-12317454 | Msa0589440:intron | 35.0% |
| ! | ACTTGCTGCTTGTAAAATTC+AGG | + | chr4_2:12317532-12317551 | None:intergenic | 35.0% |
| TAAAAACAAATCAGCAGGTC+TGG | + | chr4_2:12317557-12317576 | None:intergenic | 35.0% | |
| GATTTAAACATCACACACCA+AGG | + | chr4_2:12317608-12317627 | None:intergenic | 35.0% | |
| ! | GGCATGTGTCTGAATATTTT+AGG | - | chr4_2:12317636-12317655 | Msa0589440:five_prime_UTR | 35.0% |
| GAATGAGAGTGGAGTAAACA+GGG | + | chr4_2:12314593-12314612 | None:intergenic | 40.0% | |
| AGAATGAGAGTGGAGTAAAC+AGG | + | chr4_2:12314594-12314613 | None:intergenic | 40.0% | |
| ACGATTCTGGTATTCGATTC+TGG | - | chr4_2:12314801-12314820 | Msa0589440:three_prime_UTR | 40.0% | |
| ! | GGCAATATTATCGGTTGTGA+TGG | - | chr4_2:12315289-12315308 | Msa0589440:CDS | 40.0% |
| !! | GCTTTTAAGGACAATGGGTA+AGG | - | chr4_2:12315844-12315863 | Msa0589440:intron | 40.0% |
| AAGGACAATGGGTAAGGAAA+AGG | - | chr4_2:12315850-12315869 | Msa0589440:intron | 40.0% | |
| AGCGTTCATTCAAGTATGCT+TGG | - | chr4_2:12316008-12316027 | Msa0589440:CDS | 40.0% | |
| GCGTTCATTCAAGTATGCTT+GGG | - | chr4_2:12316009-12316028 | Msa0589440:CDS | 40.0% | |
| TCACAATTGACATTGCTCTG+TGG | - | chr4_2:12316068-12316087 | Msa0589440:CDS | 40.0% | |
| TTAATGAAATCCCTGTGTCC+GGG | + | chr4_2:12316136-12316155 | None:intergenic | 40.0% | |
| CTTAATGAAATCCCTGTGTC+CGG | + | chr4_2:12316137-12316156 | None:intergenic | 40.0% | |
| TACCTGCTCTTGGAATACTT+GGG | + | chr4_2:12316437-12316456 | None:intergenic | 40.0% | |
| ATACCTGCTCTTGGAATACT+TGG | + | chr4_2:12316438-12316457 | None:intergenic | 40.0% | |
| ATCTTGTAGACATCCTGAAG+TGG | + | chr4_2:12316668-12316687 | None:intergenic | 40.0% | |
| CTTCAGGATGTCTACAAGAT+TGG | - | chr4_2:12316668-12316687 | Msa0589440:intron | 40.0% | |
| GTCTACAAGATTGGAGGAAT+TGG | - | chr4_2:12316677-12316696 | Msa0589440:intron | 40.0% | |
| TTAAATCCCACATTGTCACC+GGG | + | chr4_2:12316833-12316852 | None:intergenic | 40.0% | |
| TTATGTTGCCTCAAACACCA+AGG | - | chr4_2:12316889-12316908 | Msa0589440:intron | 40.0% | |
| GTGATTATCATGAATCACCC+TGG | - | chr4_2:12316950-12316969 | Msa0589440:intron | 40.0% | |
| AGCAAACTTGACAGCAATGT+GGG | + | chr4_2:12317020-12317039 | None:intergenic | 40.0% | |
| TCTCCATTCTTCAGGAACTT+GGG | + | chr4_2:12317094-12317113 | None:intergenic | 40.0% | |
| ATCTCCATTCTTCAGGAACT+TGG | + | chr4_2:12317095-12317114 | None:intergenic | 40.0% | |
| GAGAAAGTCTCAACAACCAT+GGG | + | chr4_2:12317148-12317167 | None:intergenic | 40.0% | |
| AGAGAAAGTCTCAACAACCA+TGG | + | chr4_2:12317149-12317168 | None:intergenic | 40.0% | |
| TTCTCTGAATATCCTCCACT+TGG | - | chr4_2:12317163-12317182 | Msa0589440:intron | 40.0% | |
| GCATATCTCTGACAGCAAAA+CGG | + | chr4_2:12317189-12317208 | None:intergenic | 40.0% | |
| CCAAGAAAAATCATCCTGCA+CGG | + | chr4_2:12317305-12317324 | None:intergenic | 40.0% | |
| ! | CGTGCAGGATGATTTTTCTT+GGG | - | chr4_2:12317303-12317322 | Msa0589440:intron | 40.0% |
| AGCAAGGAAGAGAATGAGAG+TGG | + | chr4_2:12314604-12314623 | None:intergenic | 45.0% | |
| TCATTCTCTTCCTTGCTGCT+AGG | - | chr4_2:12314607-12314626 | Msa0589440:three_prime_UTR | 45.0% | |
| CATTCTCTTCCTTGCTGCTA+GGG | - | chr4_2:12314608-12314627 | Msa0589440:three_prime_UTR | 45.0% | |
| !! | GGTTTTAGCGCATCCTTCAA+AGG | - | chr4_2:12314629-12314648 | Msa0589440:three_prime_UTR | 45.0% |
| CTTGTAGATCAAGTGACCAG+TGG | + | chr4_2:12315927-12315946 | None:intergenic | 45.0% | |
| GGTCACTTGATCTACAAGCT+TGG | - | chr4_2:12315929-12315948 | Msa0589440:CDS | 45.0% | |
| CACTTGATCTACAAGCTTGG+AGG | - | chr4_2:12315932-12315951 | Msa0589440:CDS | 45.0% | |
| TTGGGTTCTTGACAAGCTCA+AGG | - | chr4_2:12316027-12316046 | Msa0589440:CDS | 45.0% | |
| TAATGAAATCCCTGTGTCCG+GGG | + | chr4_2:12316135-12316154 | None:intergenic | 45.0% | |
| GAGAACAGCACAATCAGCTT+GGG | + | chr4_2:12316179-12316198 | None:intergenic | 45.0% | |
| TGAGAACAGCACAATCAGCT+TGG | + | chr4_2:12316180-12316199 | None:intergenic | 45.0% | |
| !! | CTCATCATTGACTCCACTAC+TGG | - | chr4_2:12316196-12316215 | Msa0589440:CDS | 45.0% |
| !! | ATCATTGACTCCACTACTGG+TGG | - | chr4_2:12316199-12316218 | Msa0589440:CDS | 45.0% |
| AGCTTCAAAACCACCAGTAG+TGG | + | chr4_2:12316212-12316231 | None:intergenic | 45.0% | |
| !!! | ACTACTGGTGGTTTTGAAGC+TGG | - | chr4_2:12316211-12316230 | Msa0589440:CDS | 45.0% |
| GAAGCTGGTATTTCCAAGGA+TGG | - | chr4_2:12316226-12316245 | Msa0589440:CDS | 45.0% | |
| ! | AAGCAAGGAGAGCATGTTCA+CGG | + | chr4_2:12316258-12316277 | None:intergenic | 45.0% |
| TCACACCAAGAGTGAAAGCA+AGG | + | chr4_2:12316273-12316292 | None:intergenic | 45.0% | |
| ! | TTGCTTTCACTCTTGGTGTG+AGG | - | chr4_2:12316272-12316291 | Msa0589440:CDS | 45.0% |
| AATGATCTGCTGCTGCAACA+AGG | - | chr4_2:12316297-12316316 | Msa0589440:CDS | 45.0% | |
| CTTGGAATACTTGGGTGTAG+TGG | + | chr4_2:12316429-12316448 | None:intergenic | 45.0% | |
| ATTCCATTCGTTCCCATCTC+TGG | - | chr4_2:12316518-12316537 | Msa0589440:intron | 45.0% | |
| AAACCAGAGATGGGAACGAA+TGG | + | chr4_2:12316524-12316543 | None:intergenic | 45.0% | |
| !!! | GTTCCCATCTCTGGTTTTGA+GGG | - | chr4_2:12316527-12316546 | Msa0589440:intron | 45.0% |
| TCTCCCTCAAAACCAGAGAT+GGG | + | chr4_2:12316533-12316552 | None:intergenic | 45.0% | |
| ATCTCCCTCAAAACCAGAGA+TGG | + | chr4_2:12316534-12316553 | None:intergenic | 45.0% | |
| AGCGCTCTACAAATCTTGAC+TGG | - | chr4_2:12316564-12316583 | Msa0589440:intron | 45.0% | |
| !! | CAAGAGCCTCAAGAAGTGTT+GGG | + | chr4_2:12316598-12316617 | None:intergenic | 45.0% |
| ! | TCAAGAGCCTCAAGAAGTGT+TGG | + | chr4_2:12316599-12316618 | None:intergenic | 45.0% |
| AGACATCCTGAAGTGGTAGT+CGG | + | chr4_2:12316661-12316680 | None:intergenic | 45.0% | |
| CAGGATGTCTACAAGATTGG+AGG | - | chr4_2:12316671-12316690 | Msa0589440:intron | 45.0% | |
| GGAATTGGAACTGTTCCTGT+CGG | - | chr4_2:12316692-12316711 | Msa0589440:intron | 45.0% | |
| TGGTACCATGAAACCTGGAA+TGG | - | chr4_2:12316727-12316746 | Msa0589440:intron | 45.0% | |
| TACCATGAAACCTGGAATGG+TGG | - | chr4_2:12316730-12316749 | Msa0589440:intron | 45.0% | |
| ACTTCAGTTTGCAGTCCAGT+TGG | + | chr4_2:12316767-12316786 | None:intergenic | 45.0% | |
| GCAAACTGAAGTCAAGTCTG+TGG | - | chr4_2:12316775-12316794 | Msa0589440:intron | 45.0% | |
| GCATCATGAATCTCTCACTG+AGG | - | chr4_2:12316802-12316821 | Msa0589440:intron | 45.0% | |
| AAACTTGACAGCAATGTGGG+AGG | + | chr4_2:12317017-12317036 | None:intergenic | 45.0% | |
| CAGCAAACTTGACAGCAATG+TGG | + | chr4_2:12317021-12317040 | None:intergenic | 45.0% | |
| ACTAAGATTGACAGGCGTTC+TGG | - | chr4_2:12317049-12317068 | Msa0589440:intron | 45.0% | |
| TTCTGGTAAGGAGATCGAGA+AGG | - | chr4_2:12317066-12317085 | Msa0589440:intron | 45.0% | |
| TTCCTGAAGAATGGAGATGC+TGG | - | chr4_2:12317097-12317116 | Msa0589440:intron | 45.0% | |
| TACCAGCATCTCCATTCTTC+AGG | + | chr4_2:12317102-12317121 | None:intergenic | 45.0% | |
| CAGAGATATGCGTCAAACTG+TGG | - | chr4_2:12317198-12317217 | Msa0589440:intron | 45.0% | |
| ! | TATCAAGGGTGTGGAGAAGA+AGG | - | chr4_2:12317231-12317250 | Msa0589440:intron | 45.0% |
| CTGCACGGTTCATTTCTTCT+TGG | + | chr4_2:12317290-12317309 | None:intergenic | 45.0% | |
| CAAGAAGAAATGAACCGTGC+AGG | - | chr4_2:12317288-12317307 | Msa0589440:intron | 45.0% | |
| ! | CCGTGCAGGATGATTTTTCT+TGG | - | chr4_2:12317302-12317321 | Msa0589440:intron | 45.0% |
| !! | AGAACTGGGTTCTAGATCGA+CGG | - | chr4_2:12317449-12317468 | Msa0589440:intron | 45.0% |
| ATCTCATTGCCCAGAATGTC+AGG | - | chr4_2:12317661-12317680 | Msa0589440:five_prime_UTR | 45.0% | |
| !! | TCATTGGCCATGTCGACTCT+GGG | - | chr4_2:12315891-12315910 | Msa0589440:intron | 50.0% |
| TTGACTTCCCAGAGTCGACA+TGG | + | chr4_2:12315901-12315920 | None:intergenic | 50.0% | |
| TCTGGGAAGTCAACTACCAC+TGG | - | chr4_2:12315908-12315927 | Msa0589440:intron | 50.0% | |
| TTGACAAGCGTGTGATCGAG+AGG | - | chr4_2:12315957-12315976 | Msa0589440:CDS | 50.0% | |
| AATGAAATCCCTGTGTCCGG+GGG | + | chr4_2:12316134-12316153 | None:intergenic | 50.0% | |
| ! | AGCAAGGAGAGCATGTTCAC+GGG | + | chr4_2:12316257-12316276 | None:intergenic | 50.0% |
| GCTCTCCTTGCTTTCACTCT+TGG | - | chr4_2:12316265-12316284 | Msa0589440:CDS | 50.0% | |
| CACCCAAGTATTCCAAGAGC+AGG | - | chr4_2:12316432-12316451 | Msa0589440:intron | 50.0% | |
| !!! | CGTTCCCATCTCTGGTTTTG+AGG | - | chr4_2:12316526-12316545 | Msa0589440:intron | 50.0% |
| ATCCTGAAGTGGTAGTCGGA+GGG | + | chr4_2:12316657-12316676 | None:intergenic | 50.0% | |
| GAGACTGGTACCATGAAACC+TGG | - | chr4_2:12316722-12316741 | Msa0589440:intron | 50.0% | |
| CACCACCATTCCAGGTTTCA+TGG | + | chr4_2:12316735-12316754 | None:intergenic | 50.0% | |
| GCAAAAGTCACCACCATTCC+AGG | + | chr4_2:12316743-12316762 | None:intergenic | 50.0% | |
| ! | GTGGTGACTTTTGCTCCAAC+TGG | - | chr4_2:12316749-12316768 | Msa0589440:intron | 50.0% |
| TCTGTCAAGGATCTCAAGCG+TGG | - | chr4_2:12316866-12316885 | Msa0589440:intron | 50.0% | |
| !! | TGGGTCATCCTTGGTGTTTG+AGG | + | chr4_2:12316900-12316919 | None:intergenic | 50.0% |
| TGTGAAGTTAGCAGCCTCCT+TGG | + | chr4_2:12316924-12316943 | None:intergenic | 50.0% | |
| ATGAATCACCCTGGCCAGAT+TGG | - | chr4_2:12316959-12316978 | Msa0589440:intron | 50.0% | |
| AGCCATTTCCAATCTGGCCA+GGG | + | chr4_2:12316970-12316989 | None:intergenic | 50.0% | |
| TAGCCATTTCCAATCTGGCC+AGG | + | chr4_2:12316971-12316990 | None:intergenic | 50.0% | |
| GGGCATAGCCATTTCCAATC+TGG | + | chr4_2:12316976-12316995 | None:intergenic | 50.0% | |
| GATTGACAGGCGTTCTGGTA+AGG | - | chr4_2:12317054-12317073 | Msa0589440:intron | 50.0% | |
| GAGCCCAAGTTCCTGAAGAA+TGG | - | chr4_2:12317088-12317107 | Msa0589440:intron | 50.0% | |
| ! | TCAACAACCATGGGCTTGGT+GGG | + | chr4_2:12317139-12317158 | None:intergenic | 50.0% |
| AGTCTCAACAACCATGGGCT+TGG | + | chr4_2:12317143-12317162 | None:intergenic | 50.0% | |
| ATGCGTCAAACTGTGGCTGT+TGG | - | chr4_2:12317205-12317224 | Msa0589440:intron | 50.0% | |
| TGCGTCAAACTGTGGCTGTT+GGG | - | chr4_2:12317206-12317225 | Msa0589440:intron | 50.0% | |
| TGTGGCTGTTGGGGTTATCA+AGG | - | chr4_2:12317216-12317235 | Msa0589440:intron | 50.0% | |
| GTGGCTGTTGGGGTTATCAA+GGG | - | chr4_2:12317217-12317236 | Msa0589440:intron | 50.0% | |
| TGTTGGGGTTATCAAGGGTG+TGG | - | chr4_2:12317222-12317241 | Msa0589440:intron | 50.0% | |
| GCGCTAAAACCCTAGCAGCA+AGG | + | chr4_2:12314620-12314639 | None:intergenic | 55.0% | |
| !! | GTCATTGGCCATGTCGACTC+TGG | - | chr4_2:12315890-12315909 | Msa0589440:intron | 55.0% |
| CTCAAGGCTGAGCGTGAAAG+AGG | - | chr4_2:12316043-12316062 | Msa0589440:CDS | 55.0% | |
| TGCACTGTCATTGATGCCCC+CGG | - | chr4_2:12316115-12316134 | Msa0589440:CDS | 55.0% | |
| TTCACGGGTCTGACCATCCT+TGG | + | chr4_2:12316242-12316261 | None:intergenic | 55.0% | |
| CAAGGGCCCAACACTTCTTG+AGG | - | chr4_2:12316589-12316608 | Msa0589440:intron | 55.0% | |
| GGCTTGTCTGATGGCCTCTT+AGG | + | chr4_2:12316635-12316654 | None:intergenic | 55.0% | |
| TCCTGAAGTGGTAGTCGGAG+GGG | + | chr4_2:12316656-12316675 | None:intergenic | 55.0% | |
| CATCCTGAAGTGGTAGTCGG+AGG | + | chr4_2:12316658-12316677 | None:intergenic | 55.0% | |
| ! | TCTCTCACTGAGGCACTTCC+CGG | - | chr4_2:12316812-12316831 | Msa0589440:intron | 55.0% |
| GCACTTCCCGGTGACAATGT+GGG | - | chr4_2:12316824-12316843 | Msa0589440:intron | 55.0% | |
| AGTTAGCAGCCTCCTTGGCT+GGG | + | chr4_2:12316919-12316938 | None:intergenic | 55.0% | |
| AAGTTAGCAGCCTCCTTGGC+TGG | + | chr4_2:12316920-12316939 | None:intergenic | 55.0% | |
| CACCCTGGCCAGATTGGAAA+TGG | - | chr4_2:12316965-12316984 | Msa0589440:intron | 55.0% | |
| AGGTGTGGCAGTCAAGCACA+GGG | + | chr4_2:12316997-12317016 | None:intergenic | 55.0% | |
| TGACAGCAATGTGGGAGGTG+TGG | + | chr4_2:12317012-12317031 | None:intergenic | 55.0% | |
| GATGATTCCCACCAAGCCCA+TGG | - | chr4_2:12317129-12317148 | Msa0589440:intron | 55.0% | |
| CTCAACAACCATGGGCTTGG+TGG | + | chr4_2:12317140-12317159 | None:intergenic | 55.0% | |
| ACAGCAAAACGGCCAAGTGG+AGG | + | chr4_2:12317178-12317197 | None:intergenic | 55.0% | |
| CTGACAGCAAAACGGCCAAG+TGG | + | chr4_2:12317181-12317200 | None:intergenic | 55.0% | |
| GCGTCAAACTGTGGCTGTTG+GGG | - | chr4_2:12317207-12317226 | Msa0589440:intron | 55.0% | |
| GGTGTGGAGAAGAAGGAACC+TGG | - | chr4_2:12317238-12317257 | Msa0589440:intron | 55.0% | |
| !! | ACTGGGTTCTAGATCGACGG+TGG | - | chr4_2:12317452-12317471 | Msa0589440:intron | 55.0% |
| TCATTGATGCCCCCGGACAC+AGG | - | chr4_2:12316122-12316141 | Msa0589440:CDS | 60.0% | |
| CATTGATGCCCCCGGACACA+GGG | - | chr4_2:12316123-12316142 | Msa0589440:CDS | 60.0% | |
| AGTCGGAGGGGCTTGTCTGA+TGG | + | chr4_2:12316644-12316663 | None:intergenic | 60.0% | |
| CCAGTCTCAACACGTCCGAC+AGG | + | chr4_2:12316710-12316729 | None:intergenic | 60.0% | |
| CCTGTCGGACGTGTTGAGAC+TGG | - | chr4_2:12316707-12316726 | Msa0589440:intron | 60.0% | |
| GGCACTTCCCGGTGACAATG+TGG | - | chr4_2:12316823-12316842 | Msa0589440:intron | 60.0% | |
| CACCAAGGATGACCCAGCCA+AGG | - | chr4_2:12316904-12316923 | Msa0589440:intron | 60.0% | |
| CTCCTTGGCTGGGTCATCCT+TGG | + | chr4_2:12316909-12316928 | None:intergenic | 60.0% | |
| CAAGGATGACCCAGCCAAGG+AGG | - | chr4_2:12316907-12316926 | Msa0589440:intron | 60.0% | |
| GGTGTGGCAGTCAAGCACAG+GGG | + | chr4_2:12316996-12317015 | None:intergenic | 60.0% | |
| GAGGTGTGGCAGTCAAGCAC+AGG | + | chr4_2:12316998-12317017 | None:intergenic | 60.0% | |
| GCCCCTCCGACTACCACTTC+AGG | - | chr4_2:12316652-12316671 | Msa0589440:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 12314546 | 12317687 | 12314546 | ID=Msa0589440;Name=Msa0589440 |
| chr4_2 | mRNA | 12314546 | 12317687 | 12314546 | ID=Msa0589440-mRNA-1;Parent=Msa0589440;Name=Msa0589440-mRNA-1;_AED=0.07;_eAED=0.07;_QI=136|1|1|1|0.33|0|4|311|447 |
| chr4_2 | exon | 12314546 | 12314822 | 12314546 | ID=Msa0589440-mRNA-1:exon:3617;Parent=Msa0589440-mRNA-1 |
| chr4_2 | exon | 12314899 | 12315814 | 12314899 | ID=Msa0589440-mRNA-1:exon:3616;Parent=Msa0589440-mRNA-1 |
| chr4_2 | exon | 12315915 | 12316407 | 12315915 | ID=Msa0589440-mRNA-1:exon:3615;Parent=Msa0589440-mRNA-1 |
| chr4_2 | exon | 12317583 | 12317687 | 12317583 | ID=Msa0589440-mRNA-1:exon:3614;Parent=Msa0589440-mRNA-1 |
| chr4_2 | five_prime_UTR | 12317583 | 12317687 | 12317583 | ID=Msa0589440-mRNA-1:five_prime_utr;Parent=Msa0589440-mRNA-1 |
| chr4_2 | five_prime_UTR | 12316377 | 12316407 | 12316377 | ID=Msa0589440-mRNA-1:five_prime_utr;Parent=Msa0589440-mRNA-1 |
| chr4_2 | CDS | 12315915 | 12316376 | 12315915 | ID=Msa0589440-mRNA-1:cds;Parent=Msa0589440-mRNA-1 |
| chr4_2 | CDS | 12314933 | 12315814 | 12314933 | ID=Msa0589440-mRNA-1:cds;Parent=Msa0589440-mRNA-1 |
| chr4_2 | three_prime_UTR | 12314899 | 12314932 | 12314899 | ID=Msa0589440-mRNA-1:three_prime_utr;Parent=Msa0589440-mRNA-1 |
| chr4_2 | three_prime_UTR | 12314546 | 12314822 | 12314546 | ID=Msa0589440-mRNA-1:three_prime_utr;Parent=Msa0589440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
