AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0305810


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0305810 MtrunA17_Chr2g0334101 96.200 421 11 3 1 419 1 418 0.0 822
Msa0305810 MtrunA17_Chr3g0112121 49.422 346 161 9 76 415 82 419 8.84e-110 330
Msa0305810 MtrunA17_Chr4g0009431 54.110 292 127 6 124 414 134 419 1.04e-109 331
Msa0305810 MtrunA17_Chr5g0435631 48.555 346 164 9 76 415 82 419 1.56e-107 325
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0305810 AT1G73110.1 77.225 382 87 0 38 419 51 432 0.0 634
Msa0305810 AT1G73110.2 78.302 318 69 0 102 419 18 335 0.0 538
Msa0305810 AT2G39730.2 47.246 345 168 9 76 414 81 417 1.63e-103 314
Msa0305810 AT2G39730.3 47.246 345 168 9 76 414 81 417 1.85e-103 314
Msa0305810 AT2G39730.1 47.246 345 168 9 76 414 81 417 7.53e-103 313

Find 98 sgRNAs with CRISPR-Local

Find 336 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCTTTGATTCTTGGTATT+TGG 0.110335 2_3:-63836627 Msa0305810:CDS
TTACACATTTACACTGTTAT+TGG 0.152036 2_3:+63831832 None:intergenic
TCCTTTGATTCTTGGTATTT+GGG 0.170575 2_3:-63836626 Msa0305810:CDS
GCTAAAGTTCCTTTGATTCT+TGG 0.197912 2_3:-63836634 Msa0305810:CDS
AAGATTAGTTGAAGGTAATT+AGG 0.208685 2_3:+63831681 None:intergenic
TCATTTCCTGTTACAATGAT+TGG 0.261969 2_3:+63835775 None:intergenic
TCTTAGTGGGTTGATGATAT+TGG 0.294945 2_3:-63833476 Msa0305810:intron
CGCTCACGAATCAATCTTCC+AGG 0.332433 2_3:+63836493 None:intergenic
TGACCAATACTAACTCTTGT+AGG 0.349127 2_3:+63835832 None:intergenic
TAGAGAAGATAAGGAATGTT+TGG 0.349434 2_3:-63837149 Msa0305810:five_prime_UTR
AGCAGCTTCGCCATCAGTTC+AGG 0.353117 2_3:+63837084 None:intergenic
AGAATTCCAATCATTGTAAC+AGG 0.372987 2_3:-63835781 Msa0305810:CDS
TTGTTATGTTGTTATGTGGC+TGG 0.373695 2_3:-63837126 Msa0305810:five_prime_UTR
TCTGAAAATGCTGGTGAGCC+TGG 0.386060 2_3:-63836511 Msa0305810:CDS
CAAAGAACAACAGTTGATAA+TGG 0.386217 2_3:-63832078 Msa0305810:CDS
ATCATTGACGATGTCTTTGC+CGG 0.392037 2_3:-63836814 Msa0305810:CDS
CAATATTCAGTATATCTTCC+TGG 0.396347 2_3:+63835395 None:intergenic
TGTAAATGTGTAATGATATC+TGG 0.398904 2_3:-63831822 Msa0305810:three_prime_UTR
GAATAAATACAGGAAGATTC+TGG 0.403777 2_3:+63833408 None:intergenic
GTTATCAGAGCAATCTTCTT+GGG 0.408586 2_3:-63836926 Msa0305810:CDS
GCAATCTTCTTGGGAAACTA+AGG 0.416952 2_3:-63836917 Msa0305810:CDS
ATCGATGCTTTACTTGAGTC+AGG 0.418408 2_3:-63832113 Msa0305810:CDS
TCCCCAGCAGACATAATAAC+AGG 0.420434 2_3:+63836541 None:intergenic
CTTGGTATTTGGGGTGGTAA+AGG 0.421304 2_3:-63836616 Msa0305810:CDS
AGTTATCAGAGCAATCTTCT+TGG 0.427745 2_3:-63836927 Msa0305810:CDS
TAGAAAGCATGTTGGTTCTC+TGG 0.432494 2_3:-63832011 Msa0305810:three_prime_UTR
AGAATGAATTAGAAATAGAA+TGG 0.434621 2_3:+63837034 None:intergenic
GTCTCTGCCGAGAAAATTGC+CGG 0.437752 2_3:+63836795 None:intergenic
TGTAATGATATCTGGTTCAT+TGG 0.439332 2_3:-63831814 Msa0305810:three_prime_UTR
GAAATAGAATGGGAAGAAGT+TGG 0.441230 2_3:+63837045 None:intergenic
GTCAACAATCAAATTGTTGT+TGG 0.443707 2_3:-63835880 Msa0305810:CDS
GATGCTGGTCTTGGTCGATT+TGG 0.450176 2_3:-63836105 Msa0305810:intron
TACGAATAAGTACCTTGATT+AGG 0.450433 2_3:+63835307 None:intergenic
TCAACAATCAAATTGTTGTT+GGG 0.454211 2_3:-63835879 Msa0305810:CDS
TGTTGTTATGTGGCTGGGAA+TGG 0.460997 2_3:-63837120 Msa0305810:five_prime_UTR
TTGGTTGTTATGTTGTTATG+TGG 0.467237 2_3:-63837130 Msa0305810:five_prime_UTR
GAGTTAGTATTGGTCAAGAT+TGG 0.467534 2_3:-63835825 Msa0305810:CDS
TTCAGTATATCTTCCTGGTT+AGG 0.472744 2_3:+63835400 None:intergenic
TGAAGTCGCTACCTTCAATA+AGG 0.473749 2_3:-63831959 Msa0305810:three_prime_UTR
ACCTCTGGAGGAATAAATAC+AGG 0.480480 2_3:+63833398 None:intergenic
AATGACATTGATGCTGGTCT+TGG 0.482478 2_3:-63836114 Msa0305810:CDS
ATGAGAAAGATGGCATATCC+AGG 0.482603 2_3:-63835360 Msa0305810:CDS
CGCATTCGCAGCAATTCTCA+TGG 0.484110 2_3:-63836996 Msa0305810:CDS
CAATGTAATAATCTCCTTGA+AGG 0.484497 2_3:+63836722 None:intergenic
GAACCTGTTATTATGTCTGC+TGG 0.485284 2_3:-63836544 Msa0305810:CDS
AGATCATTTCAATACCTTCA+AGG 0.488011 2_3:-63836736 Msa0305810:CDS
AAGAAATTAAGATTAGTTGA+AGG 0.489328 2_3:+63831673 None:intergenic
TCAAAAGTGGACCTTATTGA+AGG 0.490483 2_3:+63831948 None:intergenic
ATCCTTCCATCACGTATCAA+TGG 0.491684 2_3:+63835733 None:intergenic
AGAAGAACCCTGTTCAAAAG+TGG 0.492603 2_3:+63831935 None:intergenic
GGTTCTCTGGTGCAAGTCCA+CGG 0.503752 2_3:-63831998 Msa0305810:three_prime_UTR
AACCTGTTATTATGTCTGCT+GGG 0.507623 2_3:-63836543 Msa0305810:CDS
TGAACTTATCTTTCGTGCCA+TGG 0.507643 2_3:-63836572 Msa0305810:CDS
TGTTATGTTGTTATGTGGCT+GGG 0.508759 2_3:-63837125 Msa0305810:five_prime_UTR
TTGATTCTTGGTATTTGGGG+TGG 0.509342 2_3:-63836622 Msa0305810:CDS
CAAATTTCTCAAAAGAAGAA+AGG 0.512041 2_3:-63833432 Msa0305810:CDS
GAATGAATTAGAAATAGAAT+GGG 0.514189 2_3:+63837035 None:intergenic
CAAAGAATGTATGAGAAAGA+TGG 0.523243 2_3:-63835370 Msa0305810:CDS
TAGCATTGAGGAGATGAGAA+AGG 0.523867 2_3:+63836653 None:intergenic
ACAACTTTGTCCATGAAAAG+AGG 0.524262 2_3:+63836697 None:intergenic
GTGGCACAGGCAGCCTAACC+AGG 0.526609 2_3:-63835413 Msa0305810:intron
CCTTTGATTCTTGGTATTTG+GGG 0.531341 2_3:-63836625 Msa0305810:CDS
TCCTGTATTTATTCCTCCAG+AGG 0.540010 2_3:-63833399 Msa0305810:intron
TCAAAGGAACTTTAGCATTG+AGG 0.541401 2_3:+63836641 None:intergenic
GAACTTGAATCTGAAAATGC+TGG 0.543802 2_3:-63836520 Msa0305810:CDS
AAAGACATCGTCAATGATGC+CGG 0.544929 2_3:+63836819 None:intergenic
GAACTTATCTTTCGTGCCAT+GGG 0.546538 2_3:-63836571 Msa0305810:CDS
ATGATCAATGACATTGATGC+TGG 0.550132 2_3:-63836120 Msa0305810:CDS
GTTCTCTGGTGCAAGTCCAC+GGG 0.551256 2_3:-63831997 Msa0305810:three_prime_UTR
ATCGCCGTTGGTCAACGTGC+CGG 0.551366 2_3:-63836838 Msa0305810:CDS
GAGGAGGATTCCTGAACTGA+TGG 0.556628 2_3:-63837094 Msa0305810:exon
ATGTGGCTGGGAATGGAAAG+AGG 0.557018 2_3:-63837113 Msa0305810:five_prime_UTR
AATGGAAACTAAACTTTCGA+AGG 0.571792 2_3:-63832060 Msa0305810:CDS
TATGCTCCATTGATACGTGA+TGG 0.578504 2_3:-63835739 Msa0305810:CDS
AATCCTACAAGAGTTAGTAT+TGG 0.579350 2_3:-63835835 Msa0305810:CDS
ACGATAATCAAAGACAATGT+CGG 0.579999 2_3:+63836771 None:intergenic
CCCCAAATACCAAGAATCAA+AGG 0.580897 2_3:+63836625 None:intergenic
GGATGACTATTTACCTCTGG+AGG 0.584674 2_3:+63833386 None:intergenic
ATTGATACGTGATGGAAGGA+TGG 0.589829 2_3:-63835731 Msa0305810:CDS
TGGGAAACTAAGGATTCTGA+AGG 0.591317 2_3:-63836907 Msa0305810:CDS
AAGACTAATAGAAAGCATGT+TGG 0.599434 2_3:-63832019 Msa0305810:exon
GATGCCGGCACGTTGACCAA+CGG 0.601114 2_3:+63836834 None:intergenic
AGAGACTATCTCTACAGACT+TGG 0.603878 2_3:-63836883 Msa0305810:CDS
TAGTGGGTTGATGATATTGG+AGG 0.612663 2_3:-63833473 Msa0305810:CDS
ATTTGGGGTGGTAAAGGCCA+AGG 0.615673 2_3:-63836610 Msa0305810:CDS
CTCCATTGATACGTGATGGA+AGG 0.616615 2_3:-63835735 Msa0305810:CDS
GCATTCGCAGCAATTCTCAT+GGG 0.621638 2_3:-63836995 Msa0305810:CDS
AATAACAGGTTCAACTCCCA+TGG 0.625979 2_3:+63836555 None:intergenic
TGAGAAAGATGGCATATCCA+GGG 0.627342 2_3:-63835359 Msa0305810:CDS
GATAACATGAACATCGCCGT+TGG 0.627507 2_3:-63836850 Msa0305810:CDS
ACCTGTTATTATGTCTGCTG+GGG 0.629895 2_3:-63836542 Msa0305810:CDS
GAAGAAGTTGGCGGTCGTAG+AGG 0.634727 2_3:+63837057 None:intergenic
GAGAATTGCTGCGAATGCGA+TGG 0.637150 2_3:+63837000 None:intergenic
ATAGAATGGGAAGAAGTTGG+CGG 0.641001 2_3:+63837048 None:intergenic
TCTGGTTCATTGGAACTGCA+TGG 0.661340 2_3:-63831804 Msa0305810:intron
ATTCTGGACGACTCTAGAAG+CGG 0.664921 2_3:+63836462 None:intergenic
ACAATCATACATAATTCCCG+TGG 0.683601 2_3:+63831981 None:intergenic
TGGCTGGGAATGGAAAGAGG+AGG 0.686675 2_3:-63837110 Msa0305810:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATAAAATCAAAACTAT+GGG + chr2_3:63833837-63833856 None:intergenic 10.0%
!! TTAAAATAAAATCAAAACTA+TGG + chr2_3:63833838-63833857 None:intergenic 10.0%
!!! AAAATTAGTATTTTTACATA+TGG + chr2_3:63834280-63834299 None:intergenic 10.0%
!! TAAATAAATATTAAAATGCA+AGG + chr2_3:63835175-63835194 None:intergenic 10.0%
!! TTTATTTATTTATAATAACC+AGG - chr2_3:63835187-63835206 Msa0305810:intron 10.0%
!! TTATTTATTTATAATAACCA+GGG - chr2_3:63835188-63835207 Msa0305810:intron 10.0%
!! ATATTTCATCAATATTAATT+TGG + chr2_3:63835548-63835567 None:intergenic 10.0%
!!! ATCATAATGTTTAATTTGTT+TGG + chr2_3:63832472-63832491 None:intergenic 15.0%
!!! ATAATCATTTTTTTTTCTCT+CGG + chr2_3:63832779-63832798 None:intergenic 15.0%
!!! TCATTTTCTTTTTTTATTCT+AGG - chr2_3:63833151-63833170 Msa0305810:intron 15.0%
!! TAATAAGCATAGAATAAAAT+AGG + chr2_3:63833693-63833712 None:intergenic 15.0%
!! AGATATATTAATGTAAACTA+AGG + chr2_3:63834232-63834251 None:intergenic 15.0%
!!! AAATTTGAAGCATAATAAAT+TGG - chr2_3:63835060-63835079 Msa0305810:intron 15.0%
!! TATTTATTTATAATAACCAG+GGG - chr2_3:63835189-63835208 Msa0305810:intron 15.0%
!! TAAATATAGCCAAAATTATT+AGG - chr2_3:63835628-63835647 Msa0305810:intron 15.0%
!! AAATATAGCCAAAATTATTA+GGG - chr2_3:63835629-63835648 Msa0305810:intron 15.0%
!! ATAAATAAGATTGAAATCTA+AGG - chr2_3:63835973-63835992 Msa0305810:intron 15.0%
!! TAAATAAGATTGAAATCTAA+GGG - chr2_3:63835974-63835993 Msa0305810:intron 15.0%
!! ATTGAAAACTCAAAATTTAA+AGG - chr2_3:63836290-63836309 Msa0305810:intron 15.0%
!! GAATGAATTAGAAATAGAAT+GGG + chr2_3:63831806-63831825 None:intergenic 20.0%
!! AGAATGAATTAGAAATAGAA+TGG + chr2_3:63831807-63831826 None:intergenic 20.0%
!! TGTATAAGTAATCATGAATT+TGG + chr2_3:63832435-63832454 None:intergenic 20.0%
!!! TACTTTTCCTGTTTTAATAT+AGG - chr2_3:63832919-63832938 Msa0305810:intron 20.0%
!!! ACTTTTCCTGTTTTAATATA+GGG - chr2_3:63832920-63832939 Msa0305810:intron 20.0%
!! CCATAATTAAAATACATGAA+TGG + chr2_3:63833188-63833207 None:intergenic 20.0%
!!! CCATTCATGTATTTTAATTA+TGG - chr2_3:63833185-63833204 Msa0305810:intron 20.0%
!!! ATTGTTGGATAAAATGTTTT+AGG - chr2_3:63833225-63833244 Msa0305810:intron 20.0%
!!! ACATTTACGAAAACATTTTA+GGG + chr2_3:63833407-63833426 None:intergenic 20.0%
!!! ATATGACAGATCTATTTTAA+AGG - chr2_3:63834196-63834215 Msa0305810:intron 20.0%
!!! AGTATTTTTACATATGGAAA+TGG + chr2_3:63834274-63834293 None:intergenic 20.0%
!!! TATGTTTGGTGAAATATTAA+TGG - chr2_3:63834317-63834336 Msa0305810:intron 20.0%
!! ACAATACCAAAAGAAAAAAA+GGG - chr2_3:63834359-63834378 Msa0305810:intron 20.0%
!! CTATAACTAATACTAGAATA+AGG + chr2_3:63834711-63834730 None:intergenic 20.0%
!! ATTTCATTACAAGTTACAAT+GGG + chr2_3:63835030-63835049 None:intergenic 20.0%
!! AATTTCATTACAAGTTACAA+TGG + chr2_3:63835031-63835050 None:intergenic 20.0%
!!! TTATTGGCTAACATTAATAT+CGG - chr2_3:63836107-63836126 Msa0305810:CDS 20.0%
!! TTATTGATATTATCATGCAA+AGG - chr2_3:63836146-63836165 Msa0305810:intron 20.0%
!!! AAATTAGTTGCAAATGTTTT+GGG - chr2_3:63836532-63836551 Msa0305810:CDS 20.0%
!!! AAATGTTACTCTTTAAAACA+AGG + chr2_3:63836628-63836647 None:intergenic 20.0%
!!! AAATTAACTGCTTTTCTATT+TGG - chr2_3:63836688-63836707 Msa0305810:CDS 20.0%
!!! TTTTGTATGTATAATTCATC+TGG - chr2_3:63836943-63836962 Msa0305810:CDS 20.0%
! GAATTTGGACATACTTAAAA+GGG + chr2_3:63832420-63832439 None:intergenic 25.0%
! TGAATTTGGACATACTTAAA+AGG + chr2_3:63832421-63832440 None:intergenic 25.0%
!!! GTTTAATTTGTTTGGATGAA+TGG + chr2_3:63832464-63832483 None:intergenic 25.0%
! CTACATTTGCTTATATTTGA+TGG - chr2_3:63832558-63832577 Msa0305810:intron 25.0%
! TTTAGCAAATTAAGGAAATG+CGG + chr2_3:63832648-63832667 None:intergenic 25.0%
! TATAGTCTAATGAACGAAAA+GGG + chr2_3:63832824-63832843 None:intergenic 25.0%
! AGTATTCCCTATATTAAAAC+AGG + chr2_3:63832929-63832948 None:intergenic 25.0%
!! TCAACAATCAAATTGTTGTT+GGG - chr2_3:63832959-63832978 Msa0305810:intron 25.0%
!! TAATTATGGTAGTTTTTGTC+AGG - chr2_3:63833199-63833218 Msa0305810:intron 25.0%
!! TGAATTTTTGCATAGTATTG+TGG - chr2_3:63833248-63833267 Msa0305810:intron 25.0%
! TGATTTCATGAAATGAAACT+AGG - chr2_3:63833364-63833383 Msa0305810:intron 25.0%
!! CACATTTACGAAAACATTTT+AGG + chr2_3:63833408-63833427 None:intergenic 25.0%
!! CTAAAATGTTTTCGTAAATG+TGG - chr2_3:63833406-63833425 Msa0305810:CDS 25.0%
!! TTTTTCTTTTGGTATTGTCT+TGG + chr2_3:63834357-63834376 None:intergenic 25.0%
! GACAATACCAAAAGAAAAAA+AGG - chr2_3:63834358-63834377 Msa0305810:intron 25.0%
!!! TTTGTTCCCTTTTTTTCTTT+TGG + chr2_3:63834368-63834387 None:intergenic 25.0%
! ATTGTTGAGAAAAATGATCT+AGG - chr2_3:63834653-63834672 Msa0305810:CDS 25.0%
! TTGTTGAGAAAAATGATCTA+GGG - chr2_3:63834654-63834673 Msa0305810:CDS 25.0%
! GATAGAAATTTACACATTCA+GGG + chr2_3:63835151-63835170 None:intergenic 25.0%
! TGATAGAAATTTACACATTC+AGG + chr2_3:63835152-63835171 None:intergenic 25.0%
! TGGATAACTCAGAAATATAA+TGG + chr2_3:63835287-63835306 None:intergenic 25.0%
! TTGTGCGGAAAAATTAAATA+TGG + chr2_3:63835307-63835326 None:intergenic 25.0%
!!! CTTTCTTCTTTTGAGAAATT+TGG + chr2_3:63835408-63835427 None:intergenic 25.0%
! CAAATTTCTCAAAAGAAGAA+AGG - chr2_3:63835406-63835425 Msa0305810:CDS 25.0%
!! TCAATATTAATTTGGTTGAC+AGG + chr2_3:63835540-63835559 None:intergenic 25.0%
! AAAATGCTAGATATCAAGAA+TGG - chr2_3:63835718-63835737 Msa0305810:CDS 25.0%
!! TATTGGCTAACATTAATTTC+AGG + chr2_3:63835888-63835907 None:intergenic 25.0%
! ATCACAAGGTAAAATATCAT+GGG + chr2_3:63836343-63836362 None:intergenic 25.0%
!! GAAATTAGTTGCAAATGTTT+TGG - chr2_3:63836531-63836550 Msa0305810:CDS 25.0%
!! AATTAGTTGCAAATGTTTTG+GGG - chr2_3:63836533-63836552 Msa0305810:CDS 25.0%
!!! TCTTTAAAACAAGGAAAAGA+AGG + chr2_3:63836619-63836638 None:intergenic 25.0%
! TTACACATTTACACTGTTAT+TGG + chr2_3:63837009-63837028 None:intergenic 25.0%
! TGTAAATGTGTAATGATATC+TGG - chr2_3:63837016-63837035 Msa0305810:CDS 25.0%
! TTACACATTTACACTGTTAT+TGG + chr2_3:63837009-63837028 None:intergenic 25.0%
! TGTAAATGTGTAATGATATC+TGG - chr2_3:63837016-63837035 Msa0305810:CDS 25.0%
TAGAGAAGATAAGGAATGTT+TGG - chr2_3:63831689-63831708 Msa0305810:three_prime_UTR 30.0%
TTGGTTGTTATGTTGTTATG+TGG - chr2_3:63831708-63831727 Msa0305810:three_prime_UTR 30.0%
ACGATAATCAAAGACAATGT+CGG + chr2_3:63832070-63832089 None:intergenic 30.0%
AGATCATTTCAATACCTTCA+AGG - chr2_3:63832102-63832121 Msa0305810:CDS 30.0%
CAATGTAATAATCTCCTTGA+AGG + chr2_3:63832119-63832138 None:intergenic 30.0%
TTCCTTTGATTCTTGGTATT+TGG - chr2_3:63832211-63832230 Msa0305810:intron 30.0%
TCCTTTGATTCTTGGTATTT+GGG - chr2_3:63832212-63832231 Msa0305810:intron 30.0%
! CAGTTTGAAAAGTTTTACCT+TGG + chr2_3:63832248-63832267 None:intergenic 30.0%
AAAAAGTCGTAACTTGATTC+TGG + chr2_3:63832395-63832414 None:intergenic 30.0%
CAGACTACTTTAGCAAATTA+AGG + chr2_3:63832656-63832675 None:intergenic 30.0%
TACATTTGCTTTCTTGATAC+AGG - chr2_3:63832678-63832697 Msa0305810:intron 30.0%
ACATTTGCTTTCTTGATACA+GGG - chr2_3:63832679-63832698 Msa0305810:intron 30.0%
ATAGTCTAATGAACGAAAAG+GGG + chr2_3:63832823-63832842 None:intergenic 30.0%
CTATAGTCTAATGAACGAAA+AGG + chr2_3:63832825-63832844 None:intergenic 30.0%
! AGGAAAAGTATGTTCAGTAA+GGG + chr2_3:63832909-63832928 None:intergenic 30.0%
GTCAACAATCAAATTGTTGT+TGG - chr2_3:63832958-63832977 Msa0305810:intron 30.0%
AATCCTACAAGAGTTAGTAT+TGG - chr2_3:63833003-63833022 Msa0305810:intron 30.0%
AGAATTCCAATCATTGTAAC+AGG - chr2_3:63833057-63833076 Msa0305810:intron 30.0%
TCATTTCCTGTTACAATGAT+TGG + chr2_3:63833066-63833085 None:intergenic 30.0%
! GAAGGATGGATAAATTTTAC+TGG - chr2_3:63833121-63833140 Msa0305810:intron 30.0%
ATGAAATTTCATGATCGATG+TGG - chr2_3:63833272-63833291 Msa0305810:intron 30.0%
CAATATTCAGTATATCTTCC+TGG + chr2_3:63833446-63833465 None:intergenic 30.0%
CAAAGAATGTATGAGAAAGA+TGG - chr2_3:63833468-63833487 Msa0305810:CDS 30.0%
! GTGAAAACTTTTCCTAATCA+AGG - chr2_3:63833519-63833538 Msa0305810:intron 30.0%
TACGAATAAGTACCTTGATT+AGG + chr2_3:63833534-63833553 None:intergenic 30.0%
CTGTTAAAACAGTAGTAAGA+AGG - chr2_3:63833593-63833612 Msa0305810:intron 30.0%
GAATGAGAGTGATAAAAGAA+GGG + chr2_3:63833742-63833761 None:intergenic 30.0%
AGAATGAGAGTGATAAAAGA+AGG + chr2_3:63833743-63833762 None:intergenic 30.0%
CTGATATCTCAGTACAAATT+TGG + chr2_3:63833796-63833815 None:intergenic 30.0%
CAAATTTGTACTGAGATATC+AGG - chr2_3:63833794-63833813 Msa0305810:intron 30.0%
AACAAGAAACAAATTGCTTC+TGG + chr2_3:63833895-63833914 None:intergenic 30.0%
!!! ACACACTCTTATTTTGATAC+CGG - chr2_3:63834136-63834155 Msa0305810:intron 30.0%
!! TTACAGTTGCTGTTTATGTT+TGG - chr2_3:63834303-63834322 Msa0305810:intron 30.0%
ATCTCTTATTATGTGACTCT+TGG - chr2_3:63834401-63834420 Msa0305810:intron 30.0%
CATTTAAACTAGTAACTGAC+AGG + chr2_3:63834526-63834545 None:intergenic 30.0%
! GTTACTAGTTTAAATGCTGT+TGG - chr2_3:63834530-63834549 Msa0305810:intron 30.0%
!! CACTCAAAAGCATTACAAAA+GGG + chr2_3:63834596-63834615 None:intergenic 30.0%
!! TCACTCAAAAGCATTACAAA+AGG + chr2_3:63834597-63834616 None:intergenic 30.0%
!! ACATTTGACATTTTGATCCA+TGG - chr2_3:63834896-63834915 Msa0305810:intron 30.0%
!! TTGATCCATGGTTTTTCAAA+AGG - chr2_3:63834908-63834927 Msa0305810:intron 30.0%
!! TGATCCATGGTTTTTCAAAA+GGG - chr2_3:63834909-63834928 Msa0305810:intron 30.0%
ATATAAACTGTTCTAGCACA+AGG + chr2_3:63834952-63834971 None:intergenic 30.0%
! TGTGATATTAGAGCCTTTTA+TGG + chr2_3:63835102-63835121 None:intergenic 30.0%
ATGTTGCATACATTACTACT+GGG + chr2_3:63835224-63835243 None:intergenic 30.0%
TATGTTGCATACATTACTAC+TGG + chr2_3:63835225-63835244 None:intergenic 30.0%
GAATAAATACAGGAAGATTC+TGG + chr2_3:63835433-63835452 None:intergenic 30.0%
!! TCAAGAATGGATTTTCTTGA+TGG - chr2_3:63835731-63835750 Msa0305810:CDS 30.0%
TCTTGATATATAGCATTGCT+CGG + chr2_3:63835844-63835863 None:intergenic 30.0%
! CTACGTTTGTAATTTTCCAT+TGG - chr2_3:63836170-63836189 Msa0305810:intron 30.0%
TTCATCTTCTATCTATCCAA+TGG + chr2_3:63836189-63836208 None:intergenic 30.0%
CATCACAAGGTAAAATATCA+TGG + chr2_3:63836344-63836363 None:intergenic 30.0%
ATCACGATAAAAACATCACA+AGG + chr2_3:63836357-63836376 None:intergenic 30.0%
!! ATTAGTTGCAAATGTTTTGG+GGG - chr2_3:63836534-63836553 Msa0305810:CDS 30.0%
!! TAACTGCTTTTCTATTTGGT+TGG - chr2_3:63836692-63836711 Msa0305810:CDS 30.0%
!! CAAAGAACAACAGTTGATAA+TGG - chr2_3:63836760-63836779 Msa0305810:CDS 30.0%
AATGGAAACTAAACTTTCGA+AGG - chr2_3:63836778-63836797 Msa0305810:CDS 30.0%
! AAGACTAATAGAAAGCATGT+TGG - chr2_3:63836819-63836838 Msa0305810:CDS 30.0%
! TGTAATGATATCTGGTTCAT+TGG - chr2_3:63837024-63837043 Msa0305810:CDS 30.0%
! TGTAATGATATCTGGTTCAT+TGG - chr2_3:63837024-63837043 Msa0305810:CDS 30.0%
TTGTTATGTTGTTATGTGGC+TGG - chr2_3:63831712-63831731 Msa0305810:three_prime_UTR 35.0%
TGTTATGTTGTTATGTGGCT+GGG - chr2_3:63831713-63831732 Msa0305810:three_prime_UTR 35.0%
GAAATAGAATGGGAAGAAGT+TGG + chr2_3:63831796-63831815 None:intergenic 35.0%
AGTTATCAGAGCAATCTTCT+TGG - chr2_3:63831911-63831930 Msa0305810:three_prime_UTR 35.0%
GTTATCAGAGCAATCTTCTT+GGG - chr2_3:63831912-63831931 Msa0305810:three_prime_UTR 35.0%
! TTACATTGCTCCTCTTTTCA+TGG - chr2_3:63832131-63832150 Msa0305810:intron 35.0%
ACAACTTTGTCCATGAAAAG+AGG + chr2_3:63832144-63832163 None:intergenic 35.0%
! GAGATGAGAAAGGTAGTTTT+TGG + chr2_3:63832178-63832197 None:intergenic 35.0%
TCAAAGGAACTTTAGCATTG+AGG + chr2_3:63832200-63832219 None:intergenic 35.0%
GCTAAAGTTCCTTTGATTCT+TGG - chr2_3:63832204-63832223 Msa0305810:intron 35.0%
CCTTTGATTCTTGGTATTTG+GGG - chr2_3:63832213-63832232 Msa0305810:intron 35.0%
AACCTGTTATTATGTCTGCT+GGG - chr2_3:63832295-63832314 Msa0305810:intron 35.0%
GAACTTGAATCTGAAAATGC+TGG - chr2_3:63832318-63832337 Msa0305810:intron 35.0%
! TGCTCTAGACTCAGTATAAT+GGG + chr2_3:63832601-63832620 None:intergenic 35.0%
! TTGCTCTAGACTCAGTATAA+TGG + chr2_3:63832602-63832621 None:intergenic 35.0%
ATGATCAATGACATTGATGC+TGG - chr2_3:63832718-63832737 Msa0305810:intron 35.0%
TAGTCTAATGAACGAAAAGG+GGG + chr2_3:63832822-63832841 None:intergenic 35.0%
! CAGGAAAAGTATGTTCAGTA+AGG + chr2_3:63832910-63832929 None:intergenic 35.0%
TGACCAATACTAACTCTTGT+AGG + chr2_3:63833009-63833028 None:intergenic 35.0%
!! GAGTTAGTATTGGTCAAGAT+TGG - chr2_3:63833013-63833032 Msa0305810:intron 35.0%
CATTAGCAATGTGATAGATG+AGG + chr2_3:63833326-63833345 None:intergenic 35.0%
TTCAGTATATCTTCCTGGTT+AGG + chr2_3:63833441-63833460 None:intergenic 35.0%
!!! AACTTTTTCAACTTCATCCC+TGG + chr2_3:63833499-63833518 None:intergenic 35.0%
TACTTATTCGTATGCCATGT+TGG - chr2_3:63833542-63833561 Msa0305810:intron 35.0%
! AGAACTTTTCTGAACCAACA+TGG + chr2_3:63833559-63833578 None:intergenic 35.0%
!! ATAAAAGAAGGGCACTCTAA+AGG + chr2_3:63833731-63833750 None:intergenic 35.0%
TATCAGGTCTGTTCTCATTT+AGG - chr2_3:63833810-63833829 Msa0305810:intron 35.0%
!! ACAGGAGATTCTTTTGAAAG+AGG + chr2_3:63834508-63834527 None:intergenic 35.0%
CCTTCTGGGCAAAAATAAAA+TGG + chr2_3:63834621-63834640 None:intergenic 35.0%
!!! CCATTTTATTTTTGCCCAGA+AGG - chr2_3:63834618-63834637 Msa0305810:intron 35.0%
! CTTGCATTTATACAGGTTGA+GGG + chr2_3:63834686-63834705 None:intergenic 35.0%
! TAAGGTGCTTGCATTTATAC+AGG + chr2_3:63834693-63834712 None:intergenic 35.0%
AGCAACTTGAACTAGTTCAT+TGG + chr2_3:63834821-63834840 None:intergenic 35.0%
!! GTTACCCTTTTGAAAAACCA+TGG + chr2_3:63834916-63834935 None:intergenic 35.0%
! TCTAGCACAAGGAATCTTTT+CGG + chr2_3:63834941-63834960 None:intergenic 35.0%
!!! AAGCCTTTTCTAGAATGAGA+AGG + chr2_3:63834987-63835006 None:intergenic 35.0%
TCTCGACAATTGACCATAAA+AGG - chr2_3:63835086-63835105 Msa0305810:intron 35.0%
GCTAATGACATACAAACTTG+TGG - chr2_3:63835335-63835354 Msa0305810:CDS 35.0%
AATGACATACAAACTTGTGG+TGG - chr2_3:63835338-63835357 Msa0305810:CDS 35.0%
!! TCTTAGTGGGTTGATGATAT+TGG - chr2_3:63835362-63835381 Msa0305810:CDS 35.0%
AAAGGATGACTATTTACCTC+TGG + chr2_3:63835458-63835477 None:intergenic 35.0%
CAGAATAGAACAGGAGAAAA+AGG + chr2_3:63835476-63835495 None:intergenic 35.0%
AGCCAAAATTATTAGGGTCA+TGG - chr2_3:63835635-63835654 Msa0305810:intron 35.0%
! GACCATGACCCTAATAATTT+TGG + chr2_3:63835640-63835659 None:intergenic 35.0%
!! TGATGGATTCAAGAATGACA+TGG - chr2_3:63835748-63835767 Msa0305810:CDS 35.0%
TAGCCAATAAAATCTCAGTC+TGG + chr2_3:63836097-63836116 None:intergenic 35.0%
ACAAGGTAAAATATCATGGG+TGG + chr2_3:63836340-63836359 None:intergenic 35.0%
AAAAGAATTGGCATGAGAGT+CGG + chr2_3:63836422-63836441 None:intergenic 35.0%
ACAATCATACATAATTCCCG+TGG + chr2_3:63836860-63836879 None:intergenic 35.0%
TCAAAAGTGGACCTTATTGA+AGG + chr2_3:63836893-63836912 None:intergenic 35.0%
!! AATAAGGTCCACTTTTGAAC+AGG - chr2_3:63836895-63836914 Msa0305810:CDS 35.0%
!! ATAAGGTCCACTTTTGAACA+GGG - chr2_3:63836896-63836915 Msa0305810:CDS 35.0%
ATAGAATGGGAAGAAGTTGG+CGG + chr2_3:63831793-63831812 None:intergenic 40.0%
GCAATCTTCTTGGGAAACTA+AGG - chr2_3:63831921-63831940 Msa0305810:three_prime_UTR 40.0%
TGGGAAACTAAGGATTCTGA+AGG - chr2_3:63831931-63831950 Msa0305810:three_prime_UTR 40.0%
AGAGACTATCTCTACAGACT+TGG - chr2_3:63831955-63831974 Msa0305810:three_prime_UTR 40.0%
AAAGACATCGTCAATGATGC+CGG + chr2_3:63832022-63832041 None:intergenic 40.0%
ATCATTGACGATGTCTTTGC+CGG - chr2_3:63832024-63832043 Msa0305810:exon 40.0%
! TAGCATTGAGGAGATGAGAA+AGG + chr2_3:63832188-63832207 None:intergenic 40.0%
CCCCAAATACCAAGAATCAA+AGG + chr2_3:63832216-63832235 None:intergenic 40.0%
TTGATTCTTGGTATTTGGGG+TGG - chr2_3:63832216-63832235 Msa0305810:intron 40.0%
TGAACTTATCTTTCGTGCCA+TGG - chr2_3:63832266-63832285 Msa0305810:intron 40.0%
GAACTTATCTTTCGTGCCAT+GGG - chr2_3:63832267-63832286 Msa0305810:intron 40.0%
AATAACAGGTTCAACTCCCA+TGG + chr2_3:63832286-63832305 None:intergenic 40.0%
GAACCTGTTATTATGTCTGC+TGG - chr2_3:63832294-63832313 Msa0305810:intron 40.0%
ACCTGTTATTATGTCTGCTG+GGG - chr2_3:63832296-63832315 Msa0305810:intron 40.0%
ATACAACATAGCTAGCTAGG+TGG + chr2_3:63832515-63832534 None:intergenic 40.0%
TGCATACAACATAGCTAGCT+AGG + chr2_3:63832518-63832537 None:intergenic 40.0%
! ACTCAGTATAATGGGAGCAT+TGG + chr2_3:63832593-63832612 None:intergenic 40.0%
! AATGACATTGATGCTGGTCT+TGG - chr2_3:63832724-63832743 Msa0305810:intron 40.0%
AATGAACGAAAAGGGGGATA+TGG + chr2_3:63832816-63832835 None:intergenic 40.0%
CTCCTAGTGTTTCAGTTACT+TGG - chr2_3:63832872-63832891 Msa0305810:intron 40.0%
GACCAAGTAACTGAAACACT+AGG + chr2_3:63832877-63832896 None:intergenic 40.0%
TGTTTCAGTTACTTGGTCAG+CGG - chr2_3:63832879-63832898 Msa0305810:intron 40.0%
TATGCTCCATTGATACGTGA+TGG - chr2_3:63833099-63833118 Msa0305810:intron 40.0%
ATCCTTCCATCACGTATCAA+TGG + chr2_3:63833108-63833127 None:intergenic 40.0%
! ATTGATACGTGATGGAAGGA+TGG - chr2_3:63833107-63833126 Msa0305810:intron 40.0%
! GTTTTTGTCAGGTGCATTGT+TGG - chr2_3:63833210-63833229 Msa0305810:intron 40.0%
! TGTTTTCGTAAATGTGGCAC+AGG - chr2_3:63833412-63833431 Msa0305810:CDS 40.0%
ATGAGAAAGATGGCATATCC+AGG - chr2_3:63833478-63833497 Msa0305810:intron 40.0%
TGAGAAAGATGGCATATCCA+GGG - chr2_3:63833479-63833498 Msa0305810:intron 40.0%
CAGTACAAATTTGGCAAACG+AGG + chr2_3:63833787-63833806 None:intergenic 40.0%
!!! TATTTTGATACCGGCAGCAT+TGG - chr2_3:63834145-63834164 Msa0305810:intron 40.0%
ATCGCCTGAGATACTTTGTA+GGG - chr2_3:63834463-63834482 Msa0305810:intron 40.0%
! TACACCCTACAAAGTATCTC+AGG + chr2_3:63834470-63834489 None:intergenic 40.0%
TGAGATACTTTGTAGGGTGT+AGG - chr2_3:63834469-63834488 Msa0305810:intron 40.0%
GAGATACTTTGTAGGGTGTA+GGG - chr2_3:63834470-63834489 Msa0305810:intron 40.0%
CATTACAAAAGGGCAGGATT+AGG + chr2_3:63834586-63834605 None:intergenic 40.0%
!! CAAAAGCATTACAAAAGGGC+AGG + chr2_3:63834592-63834611 None:intergenic 40.0%
GCTTGCATTTATACAGGTTG+AGG + chr2_3:63834687-63834706 None:intergenic 40.0%
GTGCATACTGGATAGTTGAT+AGG + chr2_3:63834776-63834795 None:intergenic 40.0%
TCCAGTATGCACAAAGAAGT+TGG - chr2_3:63834784-63834803 Msa0305810:intron 40.0%
CTAGAATGAGAAGGCTGTAT+TGG + chr2_3:63834978-63834997 None:intergenic 40.0%
! CAGCCTTCTCATTCTAGAAA+AGG - chr2_3:63834981-63835000 Msa0305810:intron 40.0%
CATTAGCAGCAATCTTTGTG+CGG + chr2_3:63835322-63835341 None:intergenic 40.0%
!! AAACTTGTGGTGGATCTTAG+TGG - chr2_3:63835348-63835367 Msa0305810:CDS 40.0%
!! AACTTGTGGTGGATCTTAGT+GGG - chr2_3:63835349-63835368 Msa0305810:CDS 40.0%
!! TAGTGGGTTGATGATATTGG+AGG - chr2_3:63835365-63835384 Msa0305810:CDS 40.0%
TCCTGTATTTATTCCTCCAG+AGG - chr2_3:63835439-63835458 Msa0305810:intron 40.0%
! ACCTCTGGAGGAATAAATAC+AGG + chr2_3:63835443-63835462 None:intergenic 40.0%
ACAACAGGACAGAATAGAAC+AGG + chr2_3:63835485-63835504 None:intergenic 40.0%
TTCTATTCTGTCCTGTTGTG+TGG - chr2_3:63835486-63835505 Msa0305810:intron 40.0%
GTAGGCTAACTGATGGTAAT+TGG - chr2_3:63835508-63835527 Msa0305810:intron 40.0%
GATATATAGCATTGCTCGGT+GGG + chr2_3:63835840-63835859 None:intergenic 40.0%
TGATATATAGCATTGCTCGG+TGG + chr2_3:63835841-63835860 None:intergenic 40.0%
TCAGTCTGGCTGAAAATCAT+GGG + chr2_3:63836083-63836102 None:intergenic 40.0%
! CAGCCAGACTGAGATTTTAT+TGG - chr2_3:63836091-63836110 Msa0305810:intron 40.0%
! TCTCATGCCAATTCTTTTGC+TGG - chr2_3:63836424-63836443 Msa0305810:intron 40.0%
ATGTTGGCCAGCAAAAGAAT+TGG + chr2_3:63836434-63836453 None:intergenic 40.0%
! TTCTTTTGCTGGCCAACATT+TGG - chr2_3:63836435-63836454 Msa0305810:intron 40.0%
! TCTTTTGCTGGCCAACATTT+GGG - chr2_3:63836436-63836455 Msa0305810:intron 40.0%
ATGTGTCTAACATAGCAGAG+AGG + chr2_3:63836465-63836484 None:intergenic 40.0%
ATCGATGCTTTACTTGAGTC+AGG - chr2_3:63836725-63836744 Msa0305810:CDS 40.0%
!! TAGAAAGCATGTTGGTTCTC+TGG - chr2_3:63836827-63836846 Msa0305810:CDS 40.0%
TGAAGTCGCTACCTTCAATA+AGG - chr2_3:63836879-63836898 Msa0305810:CDS 40.0%
AGAAGAACCCTGTTCAAAAG+TGG + chr2_3:63836906-63836925 None:intergenic 40.0%
! TCTGGTTCATTGGAACTGTA+TGG - chr2_3:63837102-63837121 Msa0305810:five_prime_UTR 40.0%
TGTTGTTATGTGGCTGGGAA+TGG - chr2_3:63831718-63831737 Msa0305810:intron 45.0%
GCATTCGCAGCAATTCTCAT+GGG - chr2_3:63831843-63831862 Msa0305810:three_prime_UTR 45.0%
GATAACATGAACATCGCCGT+TGG - chr2_3:63831988-63832007 Msa0305810:three_prime_UTR 45.0%
! GTCTTTGCCGGCAATTTTCT+CGG - chr2_3:63832036-63832055 Msa0305810:CDS 45.0%
! CTTGGTATTTGGGGTGGTAA+AGG - chr2_3:63832222-63832241 Msa0305810:intron 45.0%
TCCCCAGCAGACATAATAAC+AGG + chr2_3:63832300-63832319 None:intergenic 45.0%
! ATTCTGGACGACTCTAGAAG+CGG + chr2_3:63832379-63832398 None:intergenic 45.0%
! CTCCATTGATACGTGATGGA+AGG - chr2_3:63833103-63833122 Msa0305810:intron 45.0%
! AACAACCAAGTCTTATCCCC+AGG + chr2_3:63834018-63834037 None:intergenic 45.0%
CCATAAAAGTCCAATGCTGC+CGG + chr2_3:63834158-63834177 None:intergenic 45.0%
! CTACAAAGTATCTCAGGCGA+TGG + chr2_3:63834464-63834483 None:intergenic 45.0%
CATCGCCTGAGATACTTTGT+AGG - chr2_3:63834462-63834481 Msa0305810:intron 45.0%
ATCACTTCACAACGCCTTCT+GGG + chr2_3:63834635-63834654 None:intergenic 45.0%
AATCACTTCACAACGCCTTC+TGG + chr2_3:63834636-63834655 None:intergenic 45.0%
GCCAACTTCTTTGTGCATAC+TGG + chr2_3:63834788-63834807 None:intergenic 45.0%
GTATGCACAAAGAAGTTGGC+AGG - chr2_3:63834788-63834807 Msa0305810:intron 45.0%
ATCAAACACTGGGCAGTATC+GGG + chr2_3:63834853-63834872 None:intergenic 45.0%
CATCAAACACTGGGCAGTAT+CGG + chr2_3:63834854-63834873 None:intergenic 45.0%
GAAAGCCACCATCAAACACT+GGG + chr2_3:63834863-63834882 None:intergenic 45.0%
AGAAAGCCACCATCAAACAC+TGG + chr2_3:63834864-63834883 None:intergenic 45.0%
GGATGACTATTTACCTCTGG+AGG + chr2_3:63835455-63835474 None:intergenic 45.0%
ATTCTGTCCTGTTGTGTGGT+AGG - chr2_3:63835490-63835509 Msa0305810:intron 45.0%
TTGTGTGGTAGGCTAACTGA+TGG - chr2_3:63835501-63835520 Msa0305810:intron 45.0%
TAGCCAATAAAATCCCAGCC+TGG - chr2_3:63835899-63835918 Msa0305810:CDS 45.0%
CAGTCTGGCTGAAAATCATG+GGG + chr2_3:63836082-63836101 None:intergenic 45.0%
CTCAGTCTGGCTGAAAATCA+TGG + chr2_3:63836084-63836103 None:intergenic 45.0%
ATCGTGATCTCTCTTGCACT+TGG - chr2_3:63836369-63836388 Msa0305810:intron 45.0%
CAGAGAGGATACCCAAATGT+TGG + chr2_3:63836450-63836469 None:intergenic 45.0%
!!! AGTTGCAAATGTTTTGGGGG+AGG - chr2_3:63836537-63836556 Msa0305810:CDS 45.0%
! TCTGGTTCATTGGAACTGCA+TGG - chr2_3:63837034-63837053 Msa0305810:CDS 45.0%
GGTTCATTGGAACTGTATGG+TGG - chr2_3:63837105-63837124 Msa0305810:five_prime_UTR 45.0%
!!! ATTTAATTGTATTTTAAAAA+AGG - chr2_3:63835695-63835714 Msa0305810:intron 5.0%
ATGTGGCTGGGAATGGAAAG+AGG - chr2_3:63831725-63831744 Msa0305810:intron 50.0%
GAGGAGGATTCCTGAACTGA+TGG - chr2_3:63831744-63831763 Msa0305810:intron 50.0%
GAGAATTGCTGCGAATGCGA+TGG + chr2_3:63831841-63831860 None:intergenic 50.0%
CGCATTCGCAGCAATTCTCA+TGG - chr2_3:63831842-63831861 Msa0305810:three_prime_UTR 50.0%
GTCTCTGCCGAGAAAATTGC+CGG + chr2_3:63832046-63832065 None:intergenic 50.0%
! ATTTGGGGTGGTAAAGGCCA+AGG - chr2_3:63832228-63832247 Msa0305810:intron 50.0%
TCTGAAAATGCTGGTGAGCC+TGG - chr2_3:63832327-63832346 Msa0305810:intron 50.0%
CGCTCACGAATCAATCTTCC+AGG + chr2_3:63832348-63832367 None:intergenic 50.0%
!! GATGCTGGTCTTGGTCGATT+TGG - chr2_3:63832733-63832752 Msa0305810:intron 50.0%
! ACCAAGTCTTATCCCCAGGT+GGG + chr2_3:63834014-63834033 None:intergenic 50.0%
! AACCAAGTCTTATCCCCAGG+TGG + chr2_3:63834015-63834034 None:intergenic 50.0%
!! CCGGCAGCATTGGACTTTTA+TGG - chr2_3:63834155-63834174 Msa0305810:intron 50.0%
TACTTTGTAGGGTGTAGGGC+TGG - chr2_3:63834474-63834493 Msa0305810:intron 50.0%
CAAAAGGGCAGGATTAGGAG+TGG + chr2_3:63834581-63834600 None:intergenic 50.0%
TCAAACACTGGGCAGTATCG+GGG + chr2_3:63834852-63834871 None:intergenic 50.0%
CGATACTGCCCAGTGTTTGA+TGG - chr2_3:63834852-63834871 Msa0305810:intron 50.0%
TACTGCCCAGTGTTTGATGG+TGG - chr2_3:63834855-63834874 Msa0305810:intron 50.0%
TACTGGGAAACACATTCCCC+TGG + chr2_3:63835208-63835227 None:intergenic 50.0%
! CAGTTAGCCTACCACACAAC+AGG + chr2_3:63835500-63835519 None:intergenic 50.0%
CAATAAAATCCCAGCCTGGC+CGG - chr2_3:63835903-63835922 Msa0305810:intron 50.0%
!! AAATCATGGGGTGGTGGGTA+CGG + chr2_3:63836070-63836089 None:intergenic 50.0%
GCTGAAAATCATGGGGTGGT+GGG + chr2_3:63836075-63836094 None:intergenic 50.0%
TCTGGCTGAAAATCATGGGG+TGG + chr2_3:63836079-63836098 None:intergenic 50.0%
GGTTCATTGGAACTGCATGG+TGG - chr2_3:63837037-63837056 Msa0305810:CDS 50.0%
TGGCTGGGAATGGAAAGAGG+AGG - chr2_3:63831728-63831747 Msa0305810:intron 55.0%
AGCAGCTTCGCCATCAGTTC+AGG + chr2_3:63831757-63831776 None:intergenic 55.0%
GAAGAAGTTGGCGGTCGTAG+AGG + chr2_3:63831784-63831803 None:intergenic 55.0%
! CCAAGTCTTATCCCCAGGTG+GGG + chr2_3:63834013-63834032 None:intergenic 55.0%
! CGGCCAGGCTGGGATTTTAT+TGG + chr2_3:63835905-63835924 None:intergenic 55.0%
ACCCACCACCCCATGATTTC+CGG + chr2_3:63835925-63835944 None:intergenic 55.0%
GGCTGAAAATCATGGGGTGG+TGG + chr2_3:63836076-63836095 None:intergenic 55.0%
GGTTCTCTGGTGCAAGTCCA+CGG - chr2_3:63836840-63836859 Msa0305810:CDS 55.0%
GTTCTCTGGTGCAAGTCCAC+GGG - chr2_3:63836841-63836860 Msa0305810:CDS 55.0%
ATCGCCGTTGGTCAACGTGC+CGG - chr2_3:63832000-63832019 Msa0305810:three_prime_UTR 60.0%
GATGCCGGCACGTTGACCAA+CGG + chr2_3:63832007-63832026 None:intergenic 60.0%
GTCTTATCCCCAGGTGGGGT+CGG + chr2_3:63834009-63834028 None:intergenic 60.0%
CCCCACCTGGGGATAAGACT+TGG - chr2_3:63834010-63834029 Msa0305810:intron 60.0%
CCATGATTTCCGGCCAGGCT+GGG + chr2_3:63835915-63835934 None:intergenic 60.0%
CCAGCCTGGCCGGAAATCAT+GGG - chr2_3:63835913-63835932 Msa0305810:intron 60.0%
CAGCCTGGCCGGAAATCATG+GGG - chr2_3:63835914-63835933 Msa0305810:intron 60.0%
GCCGGAAATCATGGGGTGGT+GGG - chr2_3:63835921-63835940 Msa0305810:intron 60.0%
!! TGGGGTGGTGGGTACGGAAA+AGG + chr2_3:63836064-63836083 None:intergenic 60.0%
GTGGCACAGGCAGCCTAACC+AGG - chr2_3:63833425-63833444 Msa0305810:CDS 65.0%
TCCATGTAGCCGACCCCACC+TGG - chr2_3:63833997-63834016 Msa0305810:intron 65.0%
CCATGTAGCCGACCCCACCT+GGG - chr2_3:63833998-63834017 Msa0305810:intron 65.0%
CATGTAGCCGACCCCACCTG+GGG - chr2_3:63833999-63834018 Msa0305810:intron 65.0%
CCCAGCCTGGCCGGAAATCA+TGG - chr2_3:63835912-63835931 Msa0305810:intron 65.0%
CCCATGATTTCCGGCCAGGC+TGG + chr2_3:63835916-63835935 None:intergenic 65.0%
CCACCCCATGATTTCCGGCC+AGG + chr2_3:63835920-63835939 None:intergenic 65.0%
CCTGGCCGGAAATCATGGGG+TGG - chr2_3:63835917-63835936 Msa0305810:intron 65.0%
GGCCGGAAATCATGGGGTGG+TGG - chr2_3:63835920-63835939 Msa0305810:intron 65.0%
CCCAGGTGGGGTCGGCTACA+TGG + chr2_3:63834001-63834020 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 63831685 63837175 63831685 ID=Msa0305810;Name=Msa0305810
chr2_3 mRNA 63831685 63837175 63831685 ID=Msa0305810-mRNA-1;Parent=Msa0305810;Name=Msa0305810-mRNA-1;_AED=0.07;_eAED=0.07;_QI=78|1|1|1|0.85|0.75|8|281|419
chr2_3 exon 63831685 63831736 63831685 ID=Msa0305810-mRNA-1:exon:21337;Parent=Msa0305810-mRNA-1
chr2_3 exon 63831805 63832141 63831805 ID=Msa0305810-mRNA-1:exon:21336;Parent=Msa0305810-mRNA-1
chr2_3 exon 63833400 63833492 63833400 ID=Msa0305810-mRNA-1:exon:21335;Parent=Msa0305810-mRNA-1
chr2_3 exon 63834643 63834698 63834643 ID=Msa0305810-mRNA-1:exon:21334;Parent=Msa0305810-mRNA-1
chr2_3 exon 63835320 63835426 63835320 ID=Msa0305810-mRNA-1:exon:21333;Parent=Msa0305810-mRNA-1
chr2_3 exon 63835718 63835919 63835718 ID=Msa0305810-mRNA-1:exon:21332;Parent=Msa0305810-mRNA-1
chr2_3 exon 63836106 63836160 63836106 ID=Msa0305810-mRNA-1:exon:21331;Parent=Msa0305810-mRNA-1
chr2_3 exon 63836459 63837175 63836459 ID=Msa0305810-mRNA-1:exon:21330;Parent=Msa0305810-mRNA-1
chr2_3 five_prime_UTR 63837098 63837175 63837098 ID=Msa0305810-mRNA-1:five_prime_utr;Parent=Msa0305810-mRNA-1
chr2_3 CDS 63836459 63837097 63836459 ID=Msa0305810-mRNA-1:cds;Parent=Msa0305810-mRNA-1
chr2_3 CDS 63836106 63836160 63836106 ID=Msa0305810-mRNA-1:cds;Parent=Msa0305810-mRNA-1
chr2_3 CDS 63835718 63835919 63835718 ID=Msa0305810-mRNA-1:cds;Parent=Msa0305810-mRNA-1
chr2_3 CDS 63835320 63835426 63835320 ID=Msa0305810-mRNA-1:cds;Parent=Msa0305810-mRNA-1
chr2_3 CDS 63834643 63834698 63834643 ID=Msa0305810-mRNA-1:cds;Parent=Msa0305810-mRNA-1
chr2_3 CDS 63833400 63833492 63833400 ID=Msa0305810-mRNA-1:cds;Parent=Msa0305810-mRNA-1
chr2_3 CDS 63832034 63832141 63832034 ID=Msa0305810-mRNA-1:cds;Parent=Msa0305810-mRNA-1
chr2_3 three_prime_UTR 63831805 63832033 63831805 ID=Msa0305810-mRNA-1:three_prime_utr;Parent=Msa0305810-mRNA-1
chr2_3 three_prime_UTR 63831685 63831736 63831685 ID=Msa0305810-mRNA-1:three_prime_utr;Parent=Msa0305810-mRNA-1
Gene Sequence

>Msa0305810

ATGGCGAAGCTGCTATTACCTCTACGACCGCCAACTTCTTCCCATTCTATTTCTAATTCATTCTCATTCAAAAAACCATCGCATTCGCAGCAATTCTCATGGGTTCGATGCTGTAGTAATAGTGATGATGAAAACAACAAGAAGAAGAAGTTATCAGAGCAATCTTCTTGGGAAACTAAGGATTCTGAAGGAAGAGACTATCTCTACAGACTTGGCGCTGAAGCTGATAACATGAACATCGCCGTTGGTCAACGTGCCGGCATCATTGACGATGTCTTTGCCGGCAATTTTCTCGGCAGAGACTCCGACATTGTCTTTGATTATCGTCAGAAAGTCACTAGATCATTTCAATACCTTCAAGGAGATTATTACATTGCTCCTCTTTTCATGGACAAAGTTGTTACTCACATTACCAAAAACTACCTTTCTCATCTCCTCAATGCTAAAGTTCCTTTGATTCTTGGTATTTGGGGTGGTAAAGGCCAAGGTAAAACTTTTCAAACTGAACTTATCTTTCGTGCCATGGGAGTTGAACCTGTTATTATGTCTGCTGGGGAACTTGAATCTGAAAATGCTGGTGAGCCTGGAAGATTGATTCGTGAGCGCTACAGAACCGCTTCTAGAGTCGTCCAGAATCAAGGAAAGATGAGCTGTTTAATGATCAATGACATTGATGCTGGTCTTGGTCGATTTGGGAATACTCAAATGACAGTCAACAATCAAATTGTTGTTGGGACTCTTATGAATCTATGTGACAATCCTACAAGAGTTAGTATTGGTCAAGATTGGCGAGAAGCAGATGTCACAAACAGAATTCCAATCATTGTAACAGGAAATGATCTTTCAACTATTTATGCTCCATTGATACGTGATGGAAGGATGGATAAATTTTACTGGCAGCCTAACCAGGAAGATATACTGAATATTGTTCAAAGAATGTATGAGAAAGATGGCATATCCAGGGATGAAGTTGAAAAAGTTGTGAAAACTTTTCCTAATCAAGCATTGGACTTTTATGGAGCTCTAAGATCGCGTACATATGACAGATCTATTTTAAAGTGGGTTGATGATATTGGAGGTGCTGAAAGTTTTGCATCCAAATTTCTCAAAAGAAGAAAGGACCAGAATCTTCCTGTATTTATTCCTCCAGAGCAAACGATCGATGCTTTACTTGAGTCAGGTTATTCTCTGCTCAAAGAACAACAGTTGATAATGGAAACTAAACTTTCGAAGGAATACATGAAGAACATTGAAGACTAA

Protein sequence

>Msa0305810

MAKLLLPLRPPTSSHSISNSFSFKKPSHSQQFSWVRCCSNSDDENNKKKKLSEQSSWETKDSEGRDYLYRLGAEADNMNIAVGQRAGIIDDVFAGNFLGRDSDIVFDYRQKVTRSFQYLQGDYYIAPLFMDKVVTHITKNYLSHLLNAKVPLILGIWGGKGQGKTFQTELIFRAMGVEPVIMSAGELESENAGEPGRLIRERYRTASRVVQNQGKMSCLMINDIDAGLGRFGNTQMTVNNQIVVGTLMNLCDNPTRVSIGQDWREADVTNRIPIIVTGNDLSTIYAPLIRDGRMDKFYWQPNQEDILNIVQRMYEKDGISRDEVEKVVKTFPNQALDFYGALRSRTYDRSILKWVDDIGGAESFASKFLKRRKDQNLPVFIPPEQTIDALLESGYSLLKEQQLIMETKLSKEYMKNIED*