Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0489030 | XP_013459209.1 | 97.505 | 481 | 12 | 0 | 1 | 481 | 1 | 481 | 0.0 | 954 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0489030 | sp|Q8VYT5|FB254_ARATH | 55.372 | 484 | 192 | 9 | 9 | 479 | 4 | 476 | 5.49e-171 | 493 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0489030 | A0A072UUZ8 | 97.505 | 481 | 12 | 0 | 1 | 481 | 1 | 481 | 0.0 | 954 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0489030 | -0.803442 | 3.478545e-49 | -8.615850e-47 |
| Msa0000550 | Msa0489030 | -0.803265 | 3.786013e-49 | -8.615850e-47 |
| Msa0001790 | Msa0489030 | 0.806271 | 8.921308e-50 | -8.615850e-47 |
| Msa0004860 | Msa0489030 | 0.800943 | 1.136664e-48 | -8.615850e-47 |
| Msa0004920 | Msa0489030 | 0.808448 | 3.081864e-50 | -8.615850e-47 |
| Msa0008410 | Msa0489030 | 0.813014 | 3.170810e-51 | -8.615850e-47 |
| Msa0011720 | Msa0489030 | 0.836410 | 9.513037e-57 | -8.615850e-47 |
| Msa0014800 | Msa0489030 | 0.810196 | 1.300051e-50 | -8.615850e-47 |
| Msa0015300 | Msa0489030 | 0.808661 | 2.775406e-50 | -8.615850e-47 |
| Msa0041970 | Msa0489030 | 0.819119 | 1.372958e-52 | -8.615850e-47 |
| Msa0048000 | Msa0489030 | 0.825866 | 3.709791e-54 | -8.615850e-47 |
| Msa0050760 | Msa0489030 | 0.812510 | 4.088626e-51 | -8.615850e-47 |
| Msa0051770 | Msa0489030 | 0.807856 | 4.120352e-50 | -8.615850e-47 |
| Msa0053900 | Msa0489030 | 0.801547 | 8.554516e-49 | -8.615850e-47 |
| Msa0068680 | Msa0489030 | 0.802568 | 5.274947e-49 | -8.615850e-47 |
| Msa0071240 | Msa0489030 | 0.817153 | 3.822060e-52 | -8.615850e-47 |
| Msa0081230 | Msa0489030 | 0.804825 | 1.793851e-49 | -8.615850e-47 |
| Msa0089360 | Msa0489030 | 0.844647 | 6.642126e-59 | -8.615850e-47 |
| Msa0105340 | Msa0489030 | 0.815950 | 7.110059e-52 | -8.615850e-47 |
| Msa0105420 | Msa0489030 | 0.837014 | 6.674470e-57 | -8.615850e-47 |
| Msa0119850 | Msa0489030 | 0.802125 | 6.507737e-49 | -8.615850e-47 |
| Msa0120040 | Msa0489030 | -0.807754 | 4.330611e-50 | -8.615850e-47 |
| Msa0120330 | Msa0489030 | 0.803455 | 3.457069e-49 | -8.615850e-47 |
| Msa0120340 | Msa0489030 | 0.851686 | 7.548072e-61 | -8.615850e-47 |
| Msa0122590 | Msa0489030 | 0.820004 | 8.621896e-53 | -8.615850e-47 |
| Msa0151690 | Msa0489030 | 0.801703 | 7.943247e-49 | -8.615850e-47 |
| Msa0159770 | Msa0489030 | 0.815932 | 7.175295e-52 | -8.615850e-47 |
| Msa0166870 | Msa0489030 | 0.804908 | 1.723001e-49 | -8.615850e-47 |
| Msa0168100 | Msa0489030 | 0.803614 | 3.204433e-49 | -8.615850e-47 |
| Msa0184020 | Msa0489030 | 0.826341 | 2.860546e-54 | -8.615850e-47 |
| Msa0185590 | Msa0489030 | 0.803772 | 2.971413e-49 | -8.615850e-47 |
| Msa0188630 | Msa0489030 | 0.846063 | 2.747667e-59 | -8.615850e-47 |
| Msa0188680 | Msa0489030 | -0.822649 | 2.115588e-53 | -8.615850e-47 |
| Msa0191250 | Msa0489030 | 0.802313 | 5.952760e-49 | -8.615850e-47 |
| Msa0192060 | Msa0489030 | 0.802730 | 4.884578e-49 | -8.615850e-47 |
| Msa0193920 | Msa0489030 | 0.810403 | 1.172810e-50 | -8.615850e-47 |
| Msa0205850 | Msa0489030 | 0.833858 | 4.188702e-56 | -8.615850e-47 |
| Msa0210250 | Msa0489030 | 0.821469 | 3.971363e-53 | -8.615850e-47 |
| Msa0216240 | Msa0489030 | 0.803674 | 3.114691e-49 | -8.615850e-47 |
| Msa0223740 | Msa0489030 | 0.828823 | 7.258269e-55 | -8.615850e-47 |
| Msa0226890 | Msa0489030 | 0.816196 | 6.264872e-52 | -8.615850e-47 |
| Msa0230770 | Msa0489030 | 0.805003 | 1.646407e-49 | -8.615850e-47 |
| Msa0233610 | Msa0489030 | 0.811039 | 8.545427e-51 | -8.615850e-47 |
| Msa0235890 | Msa0489030 | 0.818081 | 2.360924e-52 | -8.615850e-47 |
| Msa0372660 | Msa0489030 | 0.829239 | 5.752811e-55 | -8.615850e-47 |
| Msa0372670 | Msa0489030 | 0.829111 | 6.178533e-55 | -8.615850e-47 |
| Msa0373930 | Msa0489030 | 0.804234 | 2.382176e-49 | -8.615850e-47 |
| Msa0376590 | Msa0489030 | 0.821301 | 4.342133e-53 | -8.615850e-47 |
| Msa0379640 | Msa0489030 | 0.826791 | 2.234708e-54 | -8.615850e-47 |
| Msa0389340 | Msa0489030 | 0.828163 | 1.047324e-54 | -8.615850e-47 |
| Msa0393680 | Msa0489030 | 0.830024 | 3.705468e-55 | -8.615850e-47 |
| Msa0393710 | Msa0489030 | 0.941743 | 2.440395e-101 | -8.615850e-47 |
| Msa0395870 | Msa0489030 | 0.802396 | 5.723355e-49 | -8.615850e-47 |
| Msa0415810 | Msa0489030 | 0.801029 | 1.091828e-48 | -8.615850e-47 |
| Msa0419620 | Msa0489030 | -0.812292 | 4.562369e-51 | -8.615850e-47 |
| Msa0426330 | Msa0489030 | 0.856783 | 2.547799e-62 | -8.615850e-47 |
| Msa0430820 | Msa0489030 | 0.812904 | 3.353219e-51 | -8.615850e-47 |
| Msa0432480 | Msa0489030 | 0.815691 | 8.121225e-52 | -8.615850e-47 |
| Msa0442200 | Msa0489030 | 0.809771 | 1.605096e-50 | -8.615850e-47 |
| Msa0442850 | Msa0489030 | 0.816367 | 5.736562e-52 | -8.615850e-47 |
| Msa0449830 | Msa0489030 | 0.807811 | 4.212918e-50 | -8.615850e-47 |
| Msa0464900 | Msa0489030 | 0.841882 | 3.627883e-58 | -8.615850e-47 |
| Msa0471800 | Msa0489030 | 0.804336 | 2.268086e-49 | -8.615850e-47 |
| Msa0473080 | Msa0489030 | 0.806001 | 1.016596e-49 | -8.615850e-47 |
| Msa0473240 | Msa0489030 | 0.813850 | 2.077342e-51 | -8.615850e-47 |
| Msa0475490 | Msa0489030 | 0.802126 | 6.503249e-49 | -8.615850e-47 |
| Msa0477130 | Msa0489030 | -0.814180 | 1.756747e-51 | -8.615850e-47 |
| Msa0242480 | Msa0489030 | 0.805800 | 1.120549e-49 | -8.615850e-47 |
| Msa0243100 | Msa0489030 | 0.800591 | 1.341397e-48 | -8.615850e-47 |
| Msa0243690 | Msa0489030 | 0.807152 | 5.810254e-50 | -8.615850e-47 |
| Msa0243710 | Msa0489030 | 0.806256 | 8.984981e-50 | -8.615850e-47 |
| Msa0248980 | Msa0489030 | 0.875119 | 3.959261e-68 | -8.615850e-47 |
| Msa0250670 | Msa0489030 | 0.824556 | 7.571470e-54 | -8.615850e-47 |
| Msa0252180 | Msa0489030 | 0.808117 | 3.625058e-50 | -8.615850e-47 |
| Msa0259560 | Msa0489030 | 0.810622 | 1.051837e-50 | -8.615850e-47 |
| Msa0260810 | Msa0489030 | 0.831678 | 1.456598e-55 | -8.615850e-47 |
| Msa0264930 | Msa0489030 | 0.819785 | 9.680012e-53 | -8.615850e-47 |
| Msa0270100 | Msa0489030 | 0.829069 | 6.325197e-55 | -8.615850e-47 |
| Msa0270220 | Msa0489030 | -0.822719 | 2.037826e-53 | -8.615850e-47 |
| Msa0270270 | Msa0489030 | 0.826285 | 2.949804e-54 | -8.615850e-47 |
| Msa0274360 | Msa0489030 | 0.806240 | 9.056616e-50 | -8.615850e-47 |
| Msa0287310 | Msa0489030 | 0.804773 | 1.838960e-49 | -8.615850e-47 |
| Msa0287650 | Msa0489030 | 0.817121 | 3.886187e-52 | -8.615850e-47 |
| Msa0296560 | Msa0489030 | 0.801717 | 7.892323e-49 | -8.615850e-47 |
| Msa0296760 | Msa0489030 | 0.818414 | 1.984581e-52 | -8.615850e-47 |
| Msa0302980 | Msa0489030 | 0.807721 | 4.401361e-50 | -8.615850e-47 |
| Msa0307830 | Msa0489030 | -0.823957 | 1.046920e-53 | -8.615850e-47 |
| Msa0311860 | Msa0489030 | 0.803080 | 4.133906e-49 | -8.615850e-47 |
| Msa0314210 | Msa0489030 | 0.820153 | 7.972644e-53 | -8.615850e-47 |
| Msa0325850 | Msa0489030 | 0.801106 | 1.053123e-48 | -8.615850e-47 |
| Msa0326670 | Msa0489030 | 0.803245 | 3.821409e-49 | -8.615850e-47 |
| Msa0327410 | Msa0489030 | 0.803408 | 3.535447e-49 | -8.615850e-47 |
| Msa0334040 | Msa0489030 | 0.803796 | 2.938426e-49 | -8.615850e-47 |
| Msa0334360 | Msa0489030 | 0.814140 | 1.792789e-51 | -8.615850e-47 |
| Msa0335040 | Msa0489030 | 0.826682 | 2.372361e-54 | -8.615850e-47 |
| Msa0347360 | Msa0489030 | 0.815955 | 7.088854e-52 | -8.615850e-47 |
| Msa0351810 | Msa0489030 | 0.816450 | 5.494643e-52 | -8.615850e-47 |
| Msa0356960 | Msa0489030 | 0.809205 | 2.122518e-50 | -8.615850e-47 |
| Msa0484780 | Msa0489030 | 0.844844 | 5.877383e-59 | -8.615850e-47 |
| Msa0485120 | Msa0489030 | 0.802308 | 5.966995e-49 | -8.615850e-47 |
| Msa0489030 | Msa0489100 | 0.886144 | 4.413927e-72 | -8.615850e-47 |
| Msa0489030 | Msa0490350 | 0.801674 | 8.053917e-49 | -8.615850e-47 |
| Msa0489030 | Msa0508200 | 0.806350 | 8.584953e-50 | -8.615850e-47 |
| Msa0489030 | Msa0509610 | 0.820961 | 5.201151e-53 | -8.615850e-47 |
| Msa0489030 | Msa0511720 | -0.829154 | 6.032038e-55 | -8.615850e-47 |
| Msa0489030 | Msa0516370 | 0.818595 | 1.805754e-52 | -8.615850e-47 |
| Msa0489030 | Msa0523460 | 0.804201 | 2.420734e-49 | -8.615850e-47 |
| Msa0489030 | Msa0526890 | 0.809757 | 1.616144e-50 | -8.615850e-47 |
| Msa0489030 | Msa0534590 | 0.803245 | 3.821897e-49 | -8.615850e-47 |
| Msa0489030 | Msa0535030 | 0.803988 | 2.680345e-49 | -8.615850e-47 |
| Msa0489030 | Msa0535060 | 0.804340 | 2.264193e-49 | -8.615850e-47 |
| Msa0489030 | Msa0547400 | 0.816439 | 5.527204e-52 | -8.615850e-47 |
| Msa0489030 | Msa0558880 | 0.808362 | 3.214545e-50 | -8.615850e-47 |
| Msa0489030 | Msa0561230 | 0.803812 | 2.916325e-49 | -8.615850e-47 |
| Msa0489030 | Msa0568820 | 0.802618 | 5.149521e-49 | -8.615850e-47 |
| Msa0489030 | Msa0575470 | 0.823751 | 1.170385e-53 | -8.615850e-47 |
| Msa0489030 | Msa0577220 | 0.817341 | 3.466966e-52 | -8.615850e-47 |
| Msa0489030 | Msa0578970 | 0.810237 | 1.273547e-50 | -8.615850e-47 |
| Msa0489030 | Msa0579130 | 0.811617 | 6.399938e-51 | -8.615850e-47 |
| Msa0489030 | Msa0585900 | 0.815067 | 1.117571e-51 | -8.615850e-47 |
| Msa0489030 | Msa0591540 | 0.817231 | 3.671388e-52 | -8.615850e-47 |
| Msa0489030 | Msa0591770 | 0.801474 | 8.850246e-49 | -8.615850e-47 |
| Msa0489030 | Msa0598460 | 0.808752 | 2.654041e-50 | -8.615850e-47 |
| Msa0489030 | Msa0599580 | 0.818450 | 1.947731e-52 | -8.615850e-47 |
| Msa0489030 | Msa0602120 | 0.808919 | 2.444948e-50 | -8.615850e-47 |
| Msa0489030 | Msa0610590 | 0.818009 | 2.451507e-52 | -8.615850e-47 |
| Msa0489030 | Msa0633060 | 0.800653 | 1.303005e-48 | -8.615850e-47 |
| Msa0489030 | Msa0638280 | 0.809494 | 1.840877e-50 | -8.615850e-47 |
| Msa0489030 | Msa0638320 | 0.812574 | 3.959671e-51 | -8.615850e-47 |
| Msa0489030 | Msa0643250 | 0.814095 | 1.834379e-51 | -8.615850e-47 |
| Msa0489030 | Msa0648880 | 0.813200 | 2.886806e-51 | -8.615850e-47 |
| Msa0489030 | Msa0651190 | 0.806562 | 7.744439e-50 | -8.615850e-47 |
| Msa0489030 | Msa0651270 | 0.800559 | 1.361452e-48 | -8.615850e-47 |
| Msa0489030 | Msa0663240 | 0.808120 | 3.620058e-50 | -8.615850e-47 |
| Msa0489030 | Msa0667050 | 0.801375 | 9.275183e-49 | -8.615850e-47 |
| Msa0489030 | Msa0677270 | 0.810124 | 1.347213e-50 | -8.615850e-47 |
| Msa0489030 | Msa0688070 | 0.817083 | 3.963280e-52 | -8.615850e-47 |
| Msa0489030 | Msa0688480 | 0.805400 | 1.359392e-49 | -8.615850e-47 |
| Msa0489030 | Msa0688670 | 0.810286 | 1.242817e-50 | -8.615850e-47 |
| Msa0489030 | Msa0691380 | 0.805914 | 1.060739e-49 | -8.615850e-47 |
| Msa0489030 | Msa0692230 | 0.835029 | 2.128163e-56 | -8.615850e-47 |
| Msa0489030 | Msa0694250 | 0.823590 | 1.276531e-53 | -8.615850e-47 |
| Msa0489030 | Msa0702350 | 0.810353 | 1.202319e-50 | -8.615850e-47 |
| Msa0489030 | Msa0702680 | 0.802125 | 6.507129e-49 | -8.615850e-47 |
| Msa0489030 | Msa0706370 | 0.809876 | 1.523228e-50 | -8.615850e-47 |
| Msa0489030 | Msa0715110 | 0.819431 | 1.165534e-52 | -8.615850e-47 |
| Msa0489030 | Msa0724830 | 0.836681 | 8.114086e-57 | -8.615850e-47 |
| Msa0489030 | Msa0726860 | 0.807984 | 3.870107e-50 | -8.615850e-47 |
| Msa0489030 | Msa0739120 | 0.814497 | 1.495220e-51 | -8.615850e-47 |
| Msa0489030 | Msa0743260 | 0.819823 | 9.488167e-53 | -8.615850e-47 |
| Msa0489030 | Msa0744040 | 0.802240 | 6.162798e-49 | -8.615850e-47 |
| Msa0489030 | Msa0749930 | 0.813455 | 2.537345e-51 | -8.615850e-47 |
| Msa0489030 | Msa0750350 | 0.812040 | 5.178244e-51 | -8.615850e-47 |
| Msa0489030 | Msa0750430 | 0.802338 | 5.881564e-49 | -8.615850e-47 |
| Msa0489030 | Msa0754720 | -0.836197 | 1.077457e-56 | -8.615850e-47 |
| Msa0489030 | Msa0756310 | 0.811250 | 7.691232e-51 | -8.615850e-47 |
| Msa0489030 | Msa0756630 | -0.810740 | 9.919449e-51 | -8.615850e-47 |
| Msa0489030 | Msa0757080 | 0.804277 | 2.334003e-49 | -8.615850e-47 |
| Msa0489030 | Msa0762210 | 0.809790 | 1.589702e-50 | -8.615850e-47 |
| Msa0489030 | Msa0765380 | 0.834187 | 3.465599e-56 | -8.615850e-47 |
| Msa0489030 | Msa0767220 | 0.821725 | 3.465270e-53 | -8.615850e-47 |
| Msa0489030 | Msa0787260 | 0.814628 | 1.398678e-51 | -8.615850e-47 |
| Msa0489030 | Msa0788710 | 0.818363 | 2.038733e-52 | -8.615850e-47 |
| Msa0489030 | Msa0789270 | 0.800499 | 1.400295e-48 | -8.615850e-47 |
| Msa0489030 | Msa0790390 | -0.819138 | 1.359434e-52 | -8.615850e-47 |
| Msa0489030 | Msa0790510 | 0.806916 | 6.519709e-50 | -8.615850e-47 |
| Msa0489030 | Msa0792090 | 0.801858 | 7.383560e-49 | -8.615850e-47 |
| Msa0489030 | Msa0795080 | 0.800959 | 1.128420e-48 | -8.615850e-47 |
| Msa0489030 | Msa0798070 | 0.826350 | 2.846781e-54 | -8.615850e-47 |
| Msa0489030 | Msa0810020 | 0.806666 | 7.363974e-50 | -8.615850e-47 |
| Msa0489030 | Msa0829190 | 0.809492 | 1.842078e-50 | -8.615850e-47 |
| Msa0489030 | Msa0829620 | 0.806179 | 9.327739e-50 | -8.615850e-47 |
| Msa0489030 | Msa0830420 | 0.813350 | 2.675721e-51 | -8.615850e-47 |
| Msa0489030 | Msa0835730 | 0.802218 | 6.226080e-49 | -8.615850e-47 |
| Msa0489030 | Msa0862100 | 0.805186 | 1.507239e-49 | -8.615850e-47 |
| Msa0489030 | Msa0869100 | 0.805750 | 1.148189e-49 | -8.615850e-47 |
| Msa0489030 | Msa0877410 | 0.821459 | 3.993339e-53 | -8.615850e-47 |
| Msa0489030 | Msa0881020 | 0.831311 | 1.793664e-55 | -8.615850e-47 |
| Msa0489030 | Msa0881030 | 0.812022 | 5.225374e-51 | -8.615850e-47 |
| Msa0489030 | Msa0882510 | 0.809118 | 2.215947e-50 | -8.615850e-47 |
| Msa0489030 | Msa0893810 | 0.836946 | 6.946721e-57 | -8.615850e-47 |
| Msa0489030 | Msa0896750 | 0.801438 | 9.002566e-49 | -8.615850e-47 |
| Msa0489030 | Msa0899230 | 0.838663 | 2.516237e-57 | -8.615850e-47 |
| Msa0489030 | Msa0908170 | 0.841175 | 5.572429e-58 | -8.615850e-47 |
| Msa0489030 | Msa0910980 | -0.826048 | 3.358276e-54 | -8.615850e-47 |
| Msa0489030 | Msa0920550 | 0.810953 | 8.921173e-51 | -8.615850e-47 |
| Msa0489030 | Msa0927670 | 0.824966 | 6.061856e-54 | -8.615850e-47 |
| Msa0489030 | Msa0933230 | 0.841840 | 3.722173e-58 | -8.615850e-47 |
| Msa0489030 | Msa0933310 | 0.835866 | 1.307563e-56 | -8.615850e-47 |
| Msa0489030 | Msa0939790 | 0.809770 | 1.605192e-50 | -8.615850e-47 |
| Msa0489030 | Msa0944770 | 0.812092 | 5.044466e-51 | -8.615850e-47 |
| Msa0489030 | Msa0959010 | 0.806972 | 6.344166e-50 | -8.615850e-47 |
| Msa0489030 | Msa0960160 | 0.837113 | 6.293476e-57 | -8.615850e-47 |
| Msa0489030 | Msa0971090 | 0.838610 | 2.595795e-57 | -8.615850e-47 |
| Msa0489030 | Msa0976330 | 0.809798 | 1.583523e-50 | -8.615850e-47 |
| Msa0489030 | Msa0982240 | 0.812417 | 4.283744e-51 | -8.615850e-47 |
| Msa0489030 | Msa0993290 | 0.810317 | 1.224392e-50 | -8.615850e-47 |
| Msa0489030 | Msa0993530 | 0.855511 | 6.007249e-62 | -8.615850e-47 |
| Msa0489030 | Msa0993600 | 0.817692 | 2.889925e-52 | -8.615850e-47 |
| Msa0489030 | Msa0999040 | 0.842184 | 3.019603e-58 | -8.615850e-47 |
| Msa0489030 | Msa1002480 | 0.807086 | 6.003056e-50 | -8.615850e-47 |
| Msa0489030 | Msa1026760 | 0.835232 | 1.891798e-56 | -8.615850e-47 |
| Msa0489030 | Msa1026790 | 0.840870 | 6.699303e-58 | -8.615850e-47 |
| Msa0489030 | Msa1029210 | 0.820686 | 6.017111e-53 | -8.615850e-47 |
| Msa0489030 | Msa1037700 | -0.840550 | 8.125464e-58 | -8.615850e-47 |
| Msa0489030 | Msa1040890 | 0.818599 | 1.801736e-52 | -8.615850e-47 |
| Msa0489030 | Msa1056460 | 0.807035 | 6.152493e-50 | -8.615850e-47 |
| Msa0489030 | Msa1078710 | 0.809725 | 1.642046e-50 | -8.615850e-47 |
| Msa0489030 | Msa1082500 | 0.841918 | 3.549229e-58 | -8.615850e-47 |
| Msa0489030 | Msa1084260 | 0.802912 | 4.478721e-49 | -8.615850e-47 |
| Msa0489030 | Msa1087470 | 0.800127 | 1.667379e-48 | -8.615850e-47 |
| Msa0489030 | Msa1092090 | 0.822185 | 2.711758e-53 | -8.615850e-47 |
| Msa0489030 | Msa1097840 | 0.810661 | 1.031828e-50 | -8.615850e-47 |
| Msa0489030 | Msa1098400 | 0.801481 | 8.823339e-49 | -8.615850e-47 |
| Msa0489030 | Msa1100720 | 0.806464 | 8.123862e-50 | -8.615850e-47 |
| Msa0489030 | Msa1111110 | 0.801852 | 7.403374e-49 | -8.615850e-47 |
| Msa0489030 | Msa1111180 | 0.818810 | 1.613645e-52 | -8.615850e-47 |
| Msa0489030 | Msa1130110 | 0.821834 | 3.269896e-53 | -8.615850e-47 |
| Msa0489030 | Msa1130210 | -0.851598 | 7.997111e-61 | -8.615850e-47 |
| Msa0489030 | Msa1130270 | -0.800497 | 1.401708e-48 | -8.615850e-47 |
| Msa0489030 | Msa1133710 | 0.815982 | 6.991912e-52 | -8.615850e-47 |
| Msa0489030 | Msa1137600 | 0.800192 | 1.617571e-48 | -8.615850e-47 |
| Msa0489030 | Msa1140690 | 0.822753 | 2.001304e-53 | -8.615850e-47 |
| Msa0489030 | Msa1151710 | 0.806404 | 8.362962e-50 | -8.615850e-47 |
| Msa0489030 | Msa1154160 | 0.812407 | 4.305511e-51 | -8.615850e-47 |
| Msa0489030 | Msa1154780 | 0.824686 | 7.057077e-54 | -8.615850e-47 |
| Msa0489030 | Msa1170280 | 0.802661 | 5.046834e-49 | -8.615850e-47 |
| Msa0489030 | Msa1170800 | 0.805468 | 1.315887e-49 | -8.615850e-47 |
| Msa0489030 | Msa1172670 | 0.823875 | 1.094516e-53 | -8.615850e-47 |
| Msa0489030 | Msa1185540 | 0.817664 | 2.933213e-52 | -8.615850e-47 |
| Msa0489030 | Msa1197060 | 0.806395 | 8.400818e-50 | -8.615850e-47 |
| Msa0489030 | Msa1199220 | 0.807629 | 4.604214e-50 | -8.615850e-47 |
| Msa0489030 | Msa1199560 | 0.843955 | 1.019154e-58 | -8.615850e-47 |
| Msa0489030 | Msa1205130 | 0.806600 | 7.604698e-50 | -8.615850e-47 |
| Msa0489030 | Msa1206020 | 0.814586 | 1.428805e-51 | -8.615850e-47 |
| Msa0489030 | Msa1214020 | 0.801744 | 7.792311e-49 | -8.615850e-47 |
| Msa0489030 | Msa1214880 | 0.808456 | 3.069237e-50 | -8.615850e-47 |
| Msa0489030 | Msa1214890 | 0.803684 | 3.099185e-49 | -8.615850e-47 |
| Msa0489030 | Msa1217660 | 0.841527 | 4.501748e-58 | -8.615850e-47 |
| Msa0489030 | Msa1217810 | 0.836420 | 9.457407e-57 | -8.615850e-47 |
| Msa0489030 | Msa1217830 | 0.832969 | 6.977799e-56 | -8.615850e-47 |
| Msa0489030 | Msa1217860 | 0.823405 | 1.410016e-53 | -8.615850e-47 |
| Msa0489030 | Msa1224480 | 0.818037 | 2.415617e-52 | -8.615850e-47 |
| Msa0489030 | Msa1224830 | 0.812495 | 4.118703e-51 | -8.615850e-47 |
| Msa0489030 | Msa1233500 | 0.835837 | 1.329556e-56 | -8.615850e-47 |
| Msa0489030 | Msa1233890 | 0.831579 | 1.541269e-55 | -8.615850e-47 |
| Msa0489030 | Msa1239530 | 0.806468 | 8.108081e-50 | -8.615850e-47 |
| Msa0489030 | Msa1249240 | 0.813406 | 2.601631e-51 | -8.615850e-47 |
| Msa0489030 | Msa1279210 | 0.830855 | 2.321977e-55 | -8.615850e-47 |
| Msa0489030 | Msa1288420 | 0.800393 | 1.472155e-48 | -8.615850e-47 |
| Msa0489030 | Msa1293280 | 0.802006 | 6.884301e-49 | -8.615850e-47 |
| Msa0489030 | Msa1297090 | 0.824400 | 8.240047e-54 | -8.615850e-47 |
| Msa0489030 | Msa1300350 | -0.835912 | 1.272938e-56 | -8.615850e-47 |
| Msa0489030 | Msa1300860 | 0.818958 | 1.493416e-52 | -8.615850e-47 |
| Msa0489030 | Msa1300870 | 0.818961 | 1.491449e-52 | -8.615850e-47 |
| Msa0489030 | Msa1306850 | 0.813368 | 2.652107e-51 | -8.615850e-47 |
| Msa0489030 | Msa1314340 | 0.820002 | 8.631382e-53 | -8.615850e-47 |
| Msa0489030 | Msa1315870 | 0.805326 | 1.408846e-49 | -8.615850e-47 |
| Msa0489030 | Msa1318240 | 0.819234 | 1.292480e-52 | -8.615850e-47 |
| Msa0489030 | Msa1320740 | 0.812984 | 3.219562e-51 | -8.615850e-47 |
| Msa0489030 | Msa1327550 | 0.822070 | 2.883203e-53 | -8.615850e-47 |
| Msa0489030 | Msa1328700 | 0.829563 | 4.799812e-55 | -8.615850e-47 |
| Msa0489030 | Msa1328850 | 0.819023 | 1.443983e-52 | -8.615850e-47 |
| Msa0489030 | Msa1331910 | 0.834482 | 2.922265e-56 | -8.615850e-47 |
| Msa0489030 | Msa1331920 | 0.806248 | 9.020728e-50 | -8.615850e-47 |
| Msa0489030 | Msa1340020 | 0.823678 | 1.217408e-53 | -8.615850e-47 |
| Msa0489030 | Msa1343820 | 0.810506 | 1.114221e-50 | -8.615850e-47 |
| Msa0489030 | Msa1359040 | 0.813976 | 1.948101e-51 | -8.615850e-47 |
| Msa0489030 | Msa1362510 | 0.832013 | 1.204332e-55 | -8.615850e-47 |
| Msa0489030 | Msa1363590 | 0.809534 | 1.804585e-50 | -8.615850e-47 |
| Msa0489030 | Msa1365040 | -0.800548 | 1.368553e-48 | -8.615850e-47 |
| Msa0489030 | Msa1370650 | 0.805370 | 1.379367e-49 | -8.615850e-47 |
| Msa0489030 | Msa1371640 | 0.806925 | 6.491781e-50 | -8.615850e-47 |
| Msa0489030 | Msa1382930 | 0.811896 | 5.564884e-51 | -8.615850e-47 |
| Msa0489030 | Msa1384350 | 0.827445 | 1.558027e-54 | -8.615850e-47 |
| Msa0489030 | Msa1385590 | 0.800327 | 1.517887e-48 | -8.615850e-47 |
| Msa0489030 | Msa1385670 | 0.821632 | 3.641190e-53 | -8.615850e-47 |
| Msa0489030 | Msa1393040 | 0.817807 | 2.722378e-52 | -8.615850e-47 |
| Msa0489030 | Msa1402270 | 0.826582 | 2.506437e-54 | -8.615850e-47 |
| Msa0489030 | Msa1403580 | -0.823360 | 1.444841e-53 | -8.615850e-47 |
| Msa0489030 | Msa1404540 | 0.838734 | 2.412018e-57 | -8.615850e-47 |
| Msa0489030 | Msa1404730 | 0.825724 | 4.009714e-54 | -8.615850e-47 |
| Msa0489030 | Msa1408790 | 0.810824 | 9.514109e-51 | -8.615850e-47 |
| Msa0489030 | Msa1411020 | 0.807121 | 5.899159e-50 | -8.615850e-47 |
| Msa0489030 | Msa1416390 | 0.804298 | 2.309929e-49 | -8.615850e-47 |
| Msa0489030 | Msa1423450 | 0.806126 | 9.571909e-50 | -8.615850e-47 |
| Msa0489030 | Msa1425010 | 0.811382 | 7.201452e-51 | -8.615850e-47 |
| Msa0489030 | Msa1429900 | 0.800679 | 1.286921e-48 | -8.615850e-47 |
| Msa0489030 | Msa1431060 | 0.831268 | 1.837686e-55 | -8.615850e-47 |
| Msa0489030 | Msa1434350 | 0.803699 | 3.077808e-49 | -8.615850e-47 |
| Msa0489030 | Msa1437680 | 0.808671 | 2.761963e-50 | -8.615850e-47 |
| Msa0489030 | Msa1439320 | 0.810964 | 8.870889e-51 | -8.615850e-47 |
| Msa0489030 | Msa1439960 | 0.826486 | 2.642965e-54 | -8.615850e-47 |
| Msa0489030 | Msa1440600 | 0.810026 | 1.414513e-50 | -8.615850e-47 |
| Msa0489030 | Msa1443290 | -0.816018 | 6.866308e-52 | -8.615850e-47 |
| Msa0489030 | Msa1445030 | 0.810473 | 1.132900e-50 | -8.615850e-47 |
| Msa0489030 | Msa1447150 | 0.801445 | 8.974369e-49 | -8.615850e-47 |
| Msa0489030 | Msa1453560 | 0.812903 | 3.354285e-51 | -8.615850e-47 |
| Msa0489030 | Msa1459180 | 0.804545 | 2.051997e-49 | -8.615850e-47 |
| Msa0489030 | Msa1466460 | 0.807236 | 5.578942e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0489030 | MtrunA17_Chr3g0079141 | 97.505 | 481 | 12 | 0 | 1 | 481 | 1 | 481 | 0.0 | 954 |
| Msa0489030 | MtrunA17_Chr4g0018891 | 67.312 | 465 | 134 | 7 | 26 | 479 | 37 | 494 | 0.0 | 614 |
| Msa0489030 | MtrunA17_Chr4g0004901 | 29.297 | 256 | 170 | 6 | 198 | 449 | 368 | 616 | 2.73e-17 | 85.1 |
| Msa0489030 | MtrunA17_Chr2g0286991 | 29.851 | 268 | 168 | 12 | 176 | 432 | 258 | 516 | 2.14e-16 | 82.0 |
| Msa0489030 | MtrunA17_Chr2g0286991 | 28.499 | 393 | 241 | 17 | 64 | 432 | 11 | 387 | 3.67e-15 | 78.2 |
| Msa0489030 | MtrunA17_Chr2g0286991 | 30.418 | 263 | 150 | 10 | 176 | 420 | 335 | 582 | 7.65e-13 | 70.9 |
| Msa0489030 | MtrunA17_Chr1g0212071 | 25.352 | 426 | 249 | 17 | 47 | 438 | 3 | 393 | 2.36e-15 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0489030 | AT5G07670.1 | 55.372 | 484 | 192 | 9 | 9 | 479 | 4 | 476 | 5.58e-172 | 493 |
| Msa0489030 | AT5G51380.1 | 53.347 | 478 | 209 | 5 | 10 | 477 | 4 | 477 | 1.13e-158 | 459 |
| Msa0489030 | AT5G51370.2 | 55.474 | 411 | 171 | 4 | 71 | 477 | 39 | 441 | 3.33e-145 | 423 |
| Msa0489030 | AT5G51370.1 | 53.846 | 325 | 138 | 4 | 71 | 391 | 39 | 355 | 6.82e-105 | 317 |
| Msa0489030 | AT4G15475.1 | 26.209 | 393 | 252 | 14 | 64 | 433 | 11 | 388 | 1.30e-15 | 80.1 |
| Msa0489030 | AT4G15475.1 | 27.068 | 266 | 178 | 10 | 176 | 432 | 258 | 516 | 5.21e-14 | 75.1 |
| Msa0489030 | AT5G25350.1 | 26.842 | 380 | 215 | 19 | 63 | 401 | 57 | 414 | 7.95e-13 | 71.2 |
| Msa0489030 | AT5G23340.1 | 24.318 | 403 | 247 | 15 | 64 | 438 | 10 | 382 | 4.89e-12 | 68.2 |
Find 134 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTACAAGTGGTGAAGTTAAT+TGG | 0.183566 | 3_4:+9176901 | Msa0489030:CDS |
| AAGAAGAGTTAGGTCGAAAT+TGG | 0.193409 | 3_4:-9176368 | None:intergenic |
| TTGATGTTTCCATTTGAATA+AGG | 0.210551 | 3_4:+9178835 | Msa0489030:three_prime_UTR |
| AATGGCGGAGAAGTGAAATT+AGG | 0.241231 | 3_4:-9176241 | None:intergenic |
| GAAATTGGGGATTAGGGTTT+TGG | 0.254582 | 3_4:-9176353 | None:intergenic |
| GTTGAAGGATTCAGCGGTTT+TGG | 0.258133 | 3_4:-9176284 | None:intergenic |
| CTCTTTGAGCGTTGTAAATA+AGG | 0.265511 | 3_4:-9178305 | None:intergenic |
| TGCTAAGGAGATTGTTCTTC+AGG | 0.266354 | 3_4:+9177302 | Msa0489030:CDS |
| TTAGGTCGAAATTGGGGATT+AGG | 0.269142 | 3_4:-9176360 | None:intergenic |
| GTGTAAGAGGTTAGTGAAAT+TGG | 0.269764 | 3_4:+9176987 | Msa0489030:CDS |
| TCCTGGATTGGAGGAACATT+TGG | 0.280302 | 3_4:+9177188 | Msa0489030:CDS |
| CAAAAGGGTGTCCGAATTTA+CGG | 0.281538 | 3_4:+9176749 | Msa0489030:CDS |
| GAAATTCATAGTGTCGTATT+TGG | 0.283620 | 3_4:+9178621 | Msa0489030:three_prime_UTR |
| AATCATGTAGTTAGTTTAGA+TGG | 0.293759 | 3_4:+9178502 | Msa0489030:three_prime_UTR |
| ATGTAATCTGATACTATTAT+AGG | 0.299912 | 3_4:+9178720 | Msa0489030:three_prime_UTR |
| GAATCTGTGGTTTCGGATAT+TGG | 0.301458 | 3_4:+9176943 | Msa0489030:CDS |
| GATTGTTCTTCAGGATTGTT+GGG | 0.305740 | 3_4:+9177311 | Msa0489030:CDS |
| TCGGTTTGGCTGTTGTTTGC+AGG | 0.308503 | 3_4:+9177352 | Msa0489030:CDS |
| AAATCAACATGTGAGAGATT+TGG | 0.315137 | 3_4:-9176559 | None:intergenic |
| CCTGGATTGGAGGAACATTT+GGG | 0.325022 | 3_4:+9177189 | Msa0489030:CDS |
| AGAAGAGTTAGGTCGAAATT+GGG | 0.332418 | 3_4:-9176367 | None:intergenic |
| ATTTGATTTGGATTGTGAAT+TGG | 0.332442 | 3_4:-9176431 | None:intergenic |
| AAGAGGGGTTGGTTAGTATT+GGG | 0.332818 | 3_4:+9176797 | Msa0489030:CDS |
| TGATGTTTCCATTTGAATAA+GGG | 0.336118 | 3_4:+9178836 | Msa0489030:three_prime_UTR |
| AATCAACATGTGAGAGATTT+GGG | 0.347210 | 3_4:-9176558 | None:intergenic |
| ACCTTCAACTTCCGTAAATT+CGG | 0.348446 | 3_4:-9176760 | None:intergenic |
| TTGTTTGATGTTGGAAGAAT+TGG | 0.353683 | 3_4:+9177062 | Msa0489030:CDS |
| TCTTCAGGATTGTTGGGGTT+TGG | 0.356666 | 3_4:+9177317 | Msa0489030:CDS |
| TACAAGTGGTGAAGTTAATT+GGG | 0.361268 | 3_4:+9176902 | Msa0489030:CDS |
| TTTGATTTGGATTGTGAATT+GGG | 0.365610 | 3_4:-9176430 | None:intergenic |
| TAGGTCGAAATTGGGGATTA+GGG | 0.366798 | 3_4:-9176359 | None:intergenic |
| TTTACTTCCCCGAGACTTGA+TGG | 0.369229 | 3_4:-9178361 | None:intergenic |
| TTACGGAAGTTGAAGGTAAC+TGG | 0.369542 | 3_4:+9176766 | Msa0489030:CDS |
| CAAATTCTCTTGTTTCTAAA+CGG | 0.369567 | 3_4:+9176449 | Msa0489030:CDS |
| ATGGCGGAGAAGTGAAATTA+GGG | 0.373028 | 3_4:-9176240 | None:intergenic |
| AGAAACAAGAGAATTTGATT+TGG | 0.382006 | 3_4:-9176443 | None:intergenic |
| GTGAGAATTTGAAGACTTTG+AGG | 0.383908 | 3_4:+9177136 | Msa0489030:CDS |
| GATTGTTGGGGTTTGGATGA+TGG | 0.388439 | 3_4:+9177324 | Msa0489030:CDS |
| AAGTTAATTGGGAGTGTTGA+TGG | 0.389086 | 3_4:+9176913 | Msa0489030:CDS |
| CAACGCTCAAAGAGTTGAAA+TGG | 0.389750 | 3_4:+9178314 | Msa0489030:CDS |
| AATCTGTGGTTTCGGATATT+GGG | 0.393863 | 3_4:+9176944 | Msa0489030:CDS |
| AGATTGTTCTTCAGGATTGT+TGG | 0.399277 | 3_4:+9177310 | Msa0489030:CDS |
| GTAAATAAGGTCGCGAGTGC+AGG | 0.404428 | 3_4:-9178292 | None:intergenic |
| TATTTAGTCCCTTATTCAAA+TGG | 0.405793 | 3_4:-9178844 | None:intergenic |
| CGTCGGAGAGAAGAAGAGTT+AGG | 0.408292 | 3_4:-9176378 | None:intergenic |
| CCCTTATCAATTGCTTCAAC+CGG | 0.408922 | 3_4:-9176712 | None:intergenic |
| GTTGATACAGAGTGGTGTTT+CGG | 0.411076 | 3_4:+9176655 | Msa0489030:CDS |
| GTGTCTTGTAAGGTGATTGA+TGG | 0.412926 | 3_4:+9177162 | Msa0489030:CDS |
| ACCGGTTGAAGCAATTGATA+AGG | 0.414611 | 3_4:+9176711 | Msa0489030:CDS |
| GTGTGTTACATTGATGGAAT+TGG | 0.414955 | 3_4:+9176825 | Msa0489030:CDS |
| TCGATGGGATTAAAGCGATT+GGG | 0.423784 | 3_4:+9177034 | Msa0489030:CDS |
| CGCTGAATCCTTCAACCATA+TGG | 0.425913 | 3_4:+9176291 | Msa0489030:CDS |
| GTAAAACTGTTTGACATAGA+AGG | 0.427093 | 3_4:+9178160 | Msa0489030:CDS |
| AAACGGTGGTTGAATCTTCA+AGG | 0.428416 | 3_4:+9176466 | Msa0489030:CDS |
| AGGGTTGAAACGACATCGTT+TGG | 0.429501 | 3_4:-9176195 | None:intergenic |
| CCGGTTGAAGCAATTGATAA+GGG | 0.433487 | 3_4:+9176712 | Msa0489030:CDS |
| ATCTTCTACCATCAAGTCTC+GGG | 0.439229 | 3_4:+9178353 | Msa0489030:CDS |
| GGAAGAGTGTGTTACATTGA+TGG | 0.441311 | 3_4:+9176819 | Msa0489030:CDS |
| GGATTGTGAATTGGGAAGCT+TGG | 0.445784 | 3_4:-9176422 | None:intergenic |
| GTAACTGGTGGGAGTGAAGA+GGG | 0.446864 | 3_4:+9176781 | Msa0489030:CDS |
| CTAACTACATGATTACATAA+TGG | 0.453631 | 3_4:-9178493 | None:intergenic |
| TTTGAGGTTTGTGTCTTGTA+AGG | 0.453944 | 3_4:+9177152 | Msa0489030:CDS |
| TGACAGTATATAGCAAGTTC+AGG | 0.454696 | 3_4:-9178425 | None:intergenic |
| GAAGAGGGGTTGGTTAGTAT+TGG | 0.456537 | 3_4:+9176796 | Msa0489030:CDS |
| TTCGATGGGATTAAAGCGAT+TGG | 0.456566 | 3_4:+9177033 | Msa0489030:CDS |
| GGTAACTGGTGGGAGTGAAG+AGG | 0.457568 | 3_4:+9176780 | Msa0489030:CDS |
| TTCAGCAAGGTCTTCTTCAA+TGG | 0.464938 | 3_4:-9176259 | None:intergenic |
| ATGGATGATGGATGGTTAGC+TGG | 0.465814 | 3_4:+9177102 | Msa0489030:CDS |
| AAGGTGATTGATGGTAATCC+TGG | 0.473788 | 3_4:+9177171 | Msa0489030:CDS |
| TTCGGTTTGTAGAGTTGCTA+AGG | 0.478037 | 3_4:+9177287 | Msa0489030:CDS |
| TTGGAGCTTGTTGGTTGTGA+AGG | 0.486017 | 3_4:+9177006 | Msa0489030:CDS |
| CCCAAATGTTCCTCCAATCC+AGG | 0.488453 | 3_4:-9177189 | None:intergenic |
| GGCGAGGACCATATGGTTGA+AGG | 0.492096 | 3_4:-9176299 | None:intergenic |
| GGTTGTGAAGGGAGTTTCGA+TGG | 0.492372 | 3_4:+9177018 | Msa0489030:CDS |
| TGGTGGGAGTGAAGAGGGGT+TGG | 0.505084 | 3_4:+9176786 | Msa0489030:CDS |
| TCCGAATTTACGGAAGTTGA+AGG | 0.507512 | 3_4:+9176759 | Msa0489030:CDS |
| AATCACGGACTCTAAACCTT+CGG | 0.509378 | 3_4:-9178200 | None:intergenic |
| GTTGTGAAGGGAGTTTCGAT+GGG | 0.515606 | 3_4:+9177019 | Msa0489030:CDS |
| GGGTTGAAAGAAGTTGCAAA+AGG | 0.515791 | 3_4:+9176733 | Msa0489030:CDS |
| GTTGATCATAGGATGGATGA+TGG | 0.516780 | 3_4:+9177090 | Msa0489030:CDS |
| TAGAGTCCGTGATTGAATCA+TGG | 0.519512 | 3_4:+9178209 | Msa0489030:CDS |
| GGATGAACAACGAAAGTTGA+AGG | 0.519861 | 3_4:-9176586 | None:intergenic |
| TGGGGCATGTTGTTTGATGT+TGG | 0.520213 | 3_4:+9177053 | Msa0489030:CDS |
| TTCGTTGTTCATCCTCAAAA+CGG | 0.520700 | 3_4:+9176595 | Msa0489030:CDS |
| GTTGCATGGCGAGGACCATA+TGG | 0.527794 | 3_4:-9176306 | None:intergenic |
| TGCTCGTTGCTTACAACCGA+AGG | 0.529914 | 3_4:+9178184 | Msa0489030:CDS |
| TGAATAAGGGACTAAATAAG+AGG | 0.530833 | 3_4:+9178849 | Msa0489030:three_prime_UTR |
| GAAGAGTTAGGTCGAAATTG+GGG | 0.532050 | 3_4:-9176366 | None:intergenic |
| AGTTAATTGGGAGTGTTGAT+GGG | 0.532541 | 3_4:+9176914 | Msa0489030:CDS |
| CATCTTCTACCATCAAGTCT+CGG | 0.533858 | 3_4:+9178352 | Msa0489030:CDS |
| CGATGGGATTAAAGCGATTG+GGG | 0.536640 | 3_4:+9177035 | Msa0489030:CDS |
| CCACCGTGTAGTTTCAATGC+GGG | 0.539306 | 3_4:+9176633 | Msa0489030:CDS |
| GACTCACTGCAGTCAGAGAT+CGG | 0.541070 | 3_4:-9178663 | None:intergenic |
| TCACTCAGCATGGAGTGAGC+TGG | 0.545805 | 3_4:-9178784 | None:intergenic |
| TAGTATCAGATTACATCTCT+AGG | 0.547585 | 3_4:-9178713 | None:intergenic |
| TTAGTGAAATTGGAGCTTGT+TGG | 0.552579 | 3_4:+9176997 | Msa0489030:CDS |
| TGGAGCTTGTTGGTTGTGAA+GGG | 0.553189 | 3_4:+9177007 | Msa0489030:CDS |
| GGTTGAAAGAAGTTGCAAAA+GGG | 0.557299 | 3_4:+9176734 | Msa0489030:CDS |
| AGAGGGGTTGGTTAGTATTG+GGG | 0.557469 | 3_4:+9176798 | Msa0489030:CDS |
| AAGTCTCGGGGAAGTAAACA+TGG | 0.561329 | 3_4:+9178366 | Msa0489030:CDS |
| AGATACTGAAAGTTGACGAC+TGG | 0.567611 | 3_4:+9178531 | Msa0489030:three_prime_UTR |
| TAACTGGTGGGAGTGAAGAG+GGG | 0.569561 | 3_4:+9176782 | Msa0489030:CDS |
| CGGTTGAAGCAATTGATAAG+GGG | 0.571061 | 3_4:+9176713 | Msa0489030:CDS |
| GATTGATGGTAATCCTGGAT+TGG | 0.572712 | 3_4:+9177176 | Msa0489030:CDS |
| CAGATTACATCTCTAGGTGG+AGG | 0.574143 | 3_4:-9178707 | None:intergenic |
| ATTCTCTTGTTTCTAAACGG+TGG | 0.582133 | 3_4:+9176452 | Msa0489030:CDS |
| AGCAAGGTCTTCTTCAATGG+CGG | 0.590858 | 3_4:-9176256 | None:intergenic |
| ATAATTACATCTCTAAGTGA+AGG | 0.591438 | 3_4:-9178749 | None:intergenic |
| CATATGGTTGAAGGATTCAG+CGG | 0.597132 | 3_4:-9176290 | None:intergenic |
| GGGAGTAAAGTCACTCAGCA+TGG | 0.598152 | 3_4:-9178794 | None:intergenic |
| ATTGTTCTTCAGGATTGTTG+GGG | 0.598171 | 3_4:+9177312 | Msa0489030:CDS |
| GTCCGTGATTGAATCATGGA+AGG | 0.600567 | 3_4:+9178213 | Msa0489030:CDS |
| CTGGATTGGAGGAACATTTG+GGG | 0.607991 | 3_4:+9177190 | Msa0489030:CDS |
| CCGCATTGAAACTACACGGT+GGG | 0.608056 | 3_4:-9176632 | None:intergenic |
| CGCTCAAAGAGTTGAAATGG+AGG | 0.614994 | 3_4:+9178317 | Msa0489030:CDS |
| ATTAAGGGATAAGAATGCAA+TGG | 0.617677 | 3_4:+9177254 | Msa0489030:CDS |
| ATCCTTCCATGATTCAATCA+CGG | 0.618648 | 3_4:-9178215 | None:intergenic |
| AGTGAGAGAGTGAAGTTGCA+TGG | 0.621452 | 3_4:-9176320 | None:intergenic |
| CGGAAGTTGAAGGTAACTGG+TGG | 0.623597 | 3_4:+9176769 | Msa0489030:CDS |
| AAACGTATGATCTTCATCAA+CGG | 0.625608 | 3_4:-9178598 | None:intergenic |
| GGTGGTTGAATCTTCAAGGA+AGG | 0.626259 | 3_4:+9176470 | Msa0489030:CDS |
| GAGAGTGAAGTTGCATGGCG+AGG | 0.626514 | 3_4:-9176315 | None:intergenic |
| ATCATAGGATGGATGATGGA+TGG | 0.627721 | 3_4:+9177094 | Msa0489030:CDS |
| AGTCTCGGGGAAGTAAACAT+GGG | 0.658337 | 3_4:+9178367 | Msa0489030:CDS |
| GGAAGTTGAAGGTAACTGGT+GGG | 0.659271 | 3_4:+9176770 | Msa0489030:CDS |
| TGATGGTAATCCTGGATTGG+AGG | 0.660453 | 3_4:+9177179 | Msa0489030:CDS |
| CAACCCGCATTGAAACTACA+CGG | 0.669967 | 3_4:-9176636 | None:intergenic |
| GTCTCGGGGAAGTAAACATG+GGG | 0.672576 | 3_4:+9178368 | Msa0489030:CDS |
| GGCGTGTAAGAATTTACAAG+TGG | 0.687214 | 3_4:+9176888 | Msa0489030:CDS |
| TCTTCTACCATCAAGTCTCG+GGG | 0.690847 | 3_4:+9178354 | Msa0489030:CDS |
| CCCACCGTGTAGTTTCAATG+CGG | 0.704229 | 3_4:+9176632 | Msa0489030:CDS |
| TATCAGATTACATCTCTAGG+TGG | 0.705179 | 3_4:-9178710 | None:intergenic |
| CAATGCGGGTTGATACAGAG+TGG | 0.708252 | 3_4:+9176647 | Msa0489030:CDS |
| CCCGCATTGAAACTACACGG+TGG | 0.733276 | 3_4:-9176633 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTACAAATATACAAAAAACT+GGG | + | chr3_4:9176165-9176184 | Msa0489030:five_prime_UTR | 15.0% |
| !!! | TTTGTATTTGAAATGTAAAT+CGG | + | chr3_4:9177709-9177728 | Msa0489030:intron | 15.0% |
| !!! | TTTGTATTTGAAATGTAAAT+CGG | + | chr3_4:9177709-9177728 | Msa0489030:intron | 15.0% |
| !! | TGTATCTTGTAAAAATATAA+AGG | + | chr3_4:9178255-9178274 | Msa0489030:CDS | 15.0% |
| !! | CTTACAAATATACAAAAAAC+TGG | + | chr3_4:9176164-9176183 | Msa0489030:five_prime_UTR | 20.0% |
| !!! | GTGTTATTGAAATTTTGAAT+TGG | + | chr3_4:9177383-9177402 | Msa0489030:intron | 20.0% |
| !! | TTACATTTCAAATACAAACT+TGG | - | chr3_4:9177707-9177726 | None:intergenic | 20.0% |
| !!! | TTTGTATTTGAAATGTGAAT+TGG | + | chr3_4:9177753-9177772 | Msa0489030:intron | 20.0% |
| !! | TTCTTCTCATCTATAAATAA+AGG | - | chr3_4:9177946-9177965 | None:intergenic | 20.0% |
| !! | AAAATGTTAAAATCATGTTG+TGG | + | chr3_4:9177965-9177984 | Msa0489030:intron | 20.0% |
| !!! | GATACAACATATAATTTTGT+CGG | - | chr3_4:9178688-9178707 | None:intergenic | 20.0% |
| !! | ATGTAATCTGATACTATTAT+AGG | + | chr3_4:9178720-9178739 | Msa0489030:three_prime_UTR | 20.0% |
| !!! | TTGTTTTTGTTATTGTGGAA+GGG | - | chr3_4:9176217-9176236 | None:intergenic | 25.0% |
| !!! | TTTGTTTTTGTTATTGTGGA+AGG | - | chr3_4:9176218-9176237 | None:intergenic | 25.0% |
| !!! | GGTTTTTGTTTTTGTTATTG+TGG | - | chr3_4:9176222-9176241 | None:intergenic | 25.0% |
| !!! | TTTGATTTGGATTGTGAATT+GGG | - | chr3_4:9176433-9176452 | None:intergenic | 25.0% |
| !!! | ATTTGATTTGGATTGTGAAT+TGG | - | chr3_4:9176434-9176453 | None:intergenic | 25.0% |
| ! | AGAAACAAGAGAATTTGATT+TGG | - | chr3_4:9176446-9176465 | None:intergenic | 25.0% |
| !!! | CAAATTCTCTTGTTTCTAAA+CGG | + | chr3_4:9176449-9176468 | Msa0489030:CDS | 25.0% |
| !!! | GATTTGAACTTTGTTTTATC+AGG | + | chr3_4:9176517-9176536 | Msa0489030:CDS | 25.0% |
| !!! | AATTGGTTTTTGTTGATCAT+AGG | + | chr3_4:9177079-9177098 | Msa0489030:CDS | 25.0% |
| !! | ATTTTCAGAGATGTCAATTA+AGG | + | chr3_4:9177238-9177257 | Msa0489030:CDS | 25.0% |
| !! | TTTTCAGAGATGTCAATTAA+GGG | + | chr3_4:9177239-9177258 | Msa0489030:CDS | 25.0% |
| !! | TCTAGCTTGTGTTTATTTAT+TGG | + | chr3_4:9177468-9177487 | Msa0489030:intron | 25.0% |
| ! | ATACAAACTTGGATTATGTT+AGG | - | chr3_4:9177696-9177715 | None:intergenic | 25.0% |
| ! | ATGACTTATGAGTTACTTAA+TGG | + | chr3_4:9178107-9178126 | Msa0489030:intron | 25.0% |
| !! | TTTTACAAGATACAACTCTA+AGG | - | chr3_4:9178249-9178268 | None:intergenic | 25.0% |
| ! | CTAACTACATGATTACATAA+TGG | - | chr3_4:9178496-9178515 | None:intergenic | 25.0% |
| !! | AATCATGTAGTTAGTTTAGA+TGG | + | chr3_4:9178502-9178521 | Msa0489030:three_prime_UTR | 25.0% |
| ! | ATAATTACATCTCTAAGTGA+AGG | - | chr3_4:9178752-9178771 | None:intergenic | 25.0% |
| ! | AAAGAACAATGAAAAATGCT+GGG | - | chr3_4:9178817-9178836 | None:intergenic | 25.0% |
| ! | TTGATGTTTCCATTTGAATA+AGG | + | chr3_4:9178835-9178854 | Msa0489030:three_prime_UTR | 25.0% |
| ! | TGATGTTTCCATTTGAATAA+GGG | + | chr3_4:9178836-9178855 | Msa0489030:three_prime_UTR | 25.0% |
| ! | TATTTAGTCCCTTATTCAAA+TGG | - | chr3_4:9178847-9178866 | None:intergenic | 25.0% |
| !! | AATTTTGAGGAGAATTTCGT+CGG | - | chr3_4:9176398-9176417 | None:intergenic | 30.0% |
| !!! | TGAACTTTGTTTTATCAGGT+AGG | + | chr3_4:9176521-9176540 | Msa0489030:CDS | 30.0% |
| AATCAACATGTGAGAGATTT+GGG | - | chr3_4:9176561-9176580 | None:intergenic | 30.0% | |
| AAATCAACATGTGAGAGATT+TGG | - | chr3_4:9176562-9176581 | None:intergenic | 30.0% | |
| ! | GTTTTTCTGATGAAGTGAAA+GGG | + | chr3_4:9176677-9176696 | Msa0489030:CDS | 30.0% |
| !! | GAAAGGGAAAAATTTGTTAC+CGG | + | chr3_4:9176693-9176712 | Msa0489030:CDS | 30.0% |
| TTACAAGTGGTGAAGTTAAT+TGG | + | chr3_4:9176901-9176920 | Msa0489030:CDS | 30.0% | |
| TACAAGTGGTGAAGTTAATT+GGG | + | chr3_4:9176902-9176921 | Msa0489030:CDS | 30.0% | |
| ! | GTTTTATGAATCTGTGGTTT+CGG | + | chr3_4:9176936-9176955 | Msa0489030:CDS | 30.0% |
| TTGTTTGATGTTGGAAGAAT+TGG | + | chr3_4:9177062-9177081 | Msa0489030:CDS | 30.0% | |
| ATTAAGGGATAAGAATGCAA+TGG | + | chr3_4:9177254-9177273 | Msa0489030:CDS | 30.0% | |
| ATTTATTGGTCCATTCACAT+TGG | + | chr3_4:9177482-9177501 | Msa0489030:intron | 30.0% | |
| ! | TATTGTTGTTAGCATGTCTT+TGG | + | chr3_4:9177529-9177548 | Msa0489030:intron | 30.0% |
| CAGATAGATTGTAATCTGTT+AGG | + | chr3_4:9177567-9177586 | Msa0489030:intron | 30.0% | |
| !!! | ACATAATGGACTAGTCTTTT+GGG | - | chr3_4:9177618-9177637 | None:intergenic | 30.0% |
| !! | GTACATAAAAGTACTCAATG+TGG | - | chr3_4:9177664-9177683 | None:intergenic | 30.0% |
| TCCAAAACTATCAACTTGAT+CGG | - | chr3_4:9177919-9177938 | None:intergenic | 30.0% | |
| ATGTTGTGGCAAATGTTTAA+AGG | + | chr3_4:9177979-9177998 | Msa0489030:intron | 30.0% | |
| GGTATTCTTAATTGACAATC+TGG | + | chr3_4:9178009-9178028 | Msa0489030:intron | 30.0% | |
| ATGAAAGTTTGTCTAATCTC+CGG | + | chr3_4:9178036-9178055 | Msa0489030:intron | 30.0% | |
| GTAAAACTGTTTGACATAGA+AGG | + | chr3_4:9178160-9178179 | Msa0489030:CDS | 30.0% | |
| AAACGTATGATCTTCATCAA+CGG | - | chr3_4:9178601-9178620 | None:intergenic | 30.0% | |
| GAAATTCATAGTGTCGTATT+TGG | + | chr3_4:9178621-9178640 | Msa0489030:three_prime_UTR | 30.0% | |
| TAGTATCAGATTACATCTCT+AGG | - | chr3_4:9178716-9178735 | None:intergenic | 30.0% | |
| CAAAGAACAATGAAAAATGC+TGG | - | chr3_4:9178818-9178837 | None:intergenic | 30.0% | |
| TGAATAAGGGACTAAATAAG+AGG | + | chr3_4:9178849-9178868 | Msa0489030:three_prime_UTR | 30.0% | |
| AGAAGAGTTAGGTCGAAATT+GGG | - | chr3_4:9176370-9176389 | None:intergenic | 35.0% | |
| AAGAAGAGTTAGGTCGAAAT+TGG | - | chr3_4:9176371-9176390 | None:intergenic | 35.0% | |
| !! | ATTCTCTTGTTTCTAAACGG+TGG | + | chr3_4:9176452-9176471 | Msa0489030:CDS | 35.0% |
| TTCGTTGTTCATCCTCAAAA+CGG | + | chr3_4:9176595-9176614 | Msa0489030:CDS | 35.0% | |
| ! | GGTTTTTCTGATGAAGTGAA+AGG | + | chr3_4:9176676-9176695 | Msa0489030:CDS | 35.0% |
| GGTTGAAAGAAGTTGCAAAA+GGG | + | chr3_4:9176734-9176753 | Msa0489030:CDS | 35.0% | |
| ACCTTCAACTTCCGTAAATT+CGG | - | chr3_4:9176763-9176782 | None:intergenic | 35.0% | |
| GTGTGTTACATTGATGGAAT+TGG | + | chr3_4:9176825-9176844 | Msa0489030:CDS | 35.0% | |
| ! | TGTAATGACGATGTTTTACG+TGG | + | chr3_4:9176859-9176878 | Msa0489030:CDS | 35.0% |
| !! | AAGTTAATTGGGAGTGTTGA+TGG | + | chr3_4:9176913-9176932 | Msa0489030:CDS | 35.0% |
| !! | AGTTAATTGGGAGTGTTGAT+GGG | + | chr3_4:9176914-9176933 | Msa0489030:CDS | 35.0% |
| !!! | TGATGGGTTTTATGAATCTG+TGG | + | chr3_4:9176930-9176949 | Msa0489030:CDS | 35.0% |
| AATCTGTGGTTTCGGATATT+GGG | + | chr3_4:9176944-9176963 | Msa0489030:CDS | 35.0% | |
| !!! | GGTTGACTATTTTAGCACAA+GGG | + | chr3_4:9176965-9176984 | Msa0489030:CDS | 35.0% |
| GTGTAAGAGGTTAGTGAAAT+TGG | + | chr3_4:9176987-9177006 | Msa0489030:CDS | 35.0% | |
| TTAGTGAAATTGGAGCTTGT+TGG | + | chr3_4:9176997-9177016 | Msa0489030:CDS | 35.0% | |
| ! | GGTTTTTGTTGATCATAGGA+TGG | + | chr3_4:9177083-9177102 | Msa0489030:CDS | 35.0% |
| GTGAGAATTTGAAGACTTTG+AGG | + | chr3_4:9177136-9177155 | Msa0489030:CDS | 35.0% | |
| ! | TTTGAGGTTTGTGTCTTGTA+AGG | + | chr3_4:9177152-9177171 | Msa0489030:CDS | 35.0% |
| AGATTGTTCTTCAGGATTGT+TGG | + | chr3_4:9177310-9177329 | Msa0489030:CDS | 35.0% | |
| GATTGTTCTTCAGGATTGTT+GGG | + | chr3_4:9177311-9177330 | Msa0489030:CDS | 35.0% | |
| ATTGTTCTTCAGGATTGTTG+GGG | + | chr3_4:9177312-9177331 | Msa0489030:CDS | 35.0% | |
| ! | ACGTGTTTTTCCAATGTGAA+TGG | - | chr3_4:9177495-9177514 | None:intergenic | 35.0% |
| !!! | CACATAATGGACTAGTCTTT+TGG | - | chr3_4:9177619-9177638 | None:intergenic | 35.0% |
| AGTACTCAATGTGGTACTTA+AGG | - | chr3_4:9177655-9177674 | None:intergenic | 35.0% | |
| !!! | TCCGATCAAGTTGATAGTTT+TGG | + | chr3_4:9177915-9177934 | Msa0489030:intron | 35.0% |
| TGAAAGTTTGTCTAATCTCC+GGG | + | chr3_4:9178037-9178056 | Msa0489030:intron | 35.0% | |
| AGTAACTCATAAGTAATCCC+CGG | - | chr3_4:9178058-9178077 | None:intergenic | 35.0% | |
| ! | TGTTGCTCTGTTTCATTTTC+AGG | + | chr3_4:9178134-9178153 | Msa0489030:intron | 35.0% |
| ATCCTTCCATGATTCAATCA+CGG | - | chr3_4:9178218-9178237 | None:intergenic | 35.0% | |
| ! | CTCTTTGAGCGTTGTAAATA+AGG | - | chr3_4:9178308-9178327 | None:intergenic | 35.0% |
| ! | GGTAGAAGATGTTTTGTATC+TGG | - | chr3_4:9178343-9178362 | None:intergenic | 35.0% |
| GAAGTAAACATGGGGAAAAA+AGG | + | chr3_4:9178376-9178395 | Msa0489030:CDS | 35.0% | |
| !!! | AAGGCGGTAAATTTTTCAAG+TGG | + | chr3_4:9178395-9178414 | Msa0489030:CDS | 35.0% |
| TGACAGTATATAGCAAGTTC+AGG | - | chr3_4:9178428-9178447 | None:intergenic | 35.0% | |
| TATCAGATTACATCTCTAGG+TGG | - | chr3_4:9178713-9178732 | None:intergenic | 35.0% | |
| ! | ATGGCGGAGAAGTGAAATTA+GGG | - | chr3_4:9176243-9176262 | None:intergenic | 40.0% |
| ! | AATGGCGGAGAAGTGAAATT+AGG | - | chr3_4:9176244-9176263 | None:intergenic | 40.0% |
| TTCAGCAAGGTCTTCTTCAA+TGG | - | chr3_4:9176262-9176281 | None:intergenic | 40.0% | |
| CATATGGTTGAAGGATTCAG+CGG | - | chr3_4:9176293-9176312 | None:intergenic | 40.0% | |
| !!! | GGATTAGGGTTTTGGAATTG+GGG | - | chr3_4:9176348-9176367 | None:intergenic | 40.0% |
| !!! | GGGATTAGGGTTTTGGAATT+GGG | - | chr3_4:9176349-9176368 | None:intergenic | 40.0% |
| ! | GAAATTGGGGATTAGGGTTT+TGG | - | chr3_4:9176356-9176375 | None:intergenic | 40.0% |
| TAGGTCGAAATTGGGGATTA+GGG | - | chr3_4:9176362-9176381 | None:intergenic | 40.0% | |
| TTAGGTCGAAATTGGGGATT+AGG | - | chr3_4:9176363-9176382 | None:intergenic | 40.0% | |
| GAAGAGTTAGGTCGAAATTG+GGG | - | chr3_4:9176369-9176388 | None:intergenic | 40.0% | |
| ! | GAAGCTTGGAGAGAATTTTG+AGG | - | chr3_4:9176411-9176430 | None:intergenic | 40.0% |
| AAACGGTGGTTGAATCTTCA+AGG | + | chr3_4:9176466-9176485 | Msa0489030:CDS | 40.0% | |
| GGATGAACAACGAAAGTTGA+AGG | - | chr3_4:9176589-9176608 | None:intergenic | 40.0% | |
| GTTGATACAGAGTGGTGTTT+CGG | + | chr3_4:9176655-9176674 | Msa0489030:CDS | 40.0% | |
| ACCGGTTGAAGCAATTGATA+AGG | + | chr3_4:9176711-9176730 | Msa0489030:CDS | 40.0% | |
| CCCTTATCAATTGCTTCAAC+CGG | - | chr3_4:9176715-9176734 | None:intergenic | 40.0% | |
| CCGGTTGAAGCAATTGATAA+GGG | + | chr3_4:9176712-9176731 | Msa0489030:CDS | 40.0% | |
| CGGTTGAAGCAATTGATAAG+GGG | + | chr3_4:9176713-9176732 | Msa0489030:CDS | 40.0% | |
| GGGTTGAAAGAAGTTGCAAA+AGG | + | chr3_4:9176733-9176752 | Msa0489030:CDS | 40.0% | |
| !! | CAAAAGGGTGTCCGAATTTA+CGG | + | chr3_4:9176749-9176768 | Msa0489030:CDS | 40.0% |
| TCCGAATTTACGGAAGTTGA+AGG | + | chr3_4:9176759-9176778 | Msa0489030:CDS | 40.0% | |
| TTACGGAAGTTGAAGGTAAC+TGG | + | chr3_4:9176766-9176785 | Msa0489030:CDS | 40.0% | |
| !! | AAGAGGGGTTGGTTAGTATT+GGG | + | chr3_4:9176797-9176816 | Msa0489030:CDS | 40.0% |
| ! | GGAAGAGTGTGTTACATTGA+TGG | + | chr3_4:9176819-9176838 | Msa0489030:CDS | 40.0% |
| GGCGTGTAAGAATTTACAAG+TGG | + | chr3_4:9176888-9176907 | Msa0489030:CDS | 40.0% | |
| GAATCTGTGGTTTCGGATAT+TGG | + | chr3_4:9176943-9176962 | Msa0489030:CDS | 40.0% | |
| !!! | GGGTTGACTATTTTAGCACA+AGG | + | chr3_4:9176964-9176983 | Msa0489030:CDS | 40.0% |
| !! | TTTTAGCACAAGGGTGTAAG+AGG | + | chr3_4:9176974-9176993 | Msa0489030:CDS | 40.0% |
| TTCGATGGGATTAAAGCGAT+TGG | + | chr3_4:9177033-9177052 | Msa0489030:CDS | 40.0% | |
| TCGATGGGATTAAAGCGATT+GGG | + | chr3_4:9177034-9177053 | Msa0489030:CDS | 40.0% | |
| GTTGATCATAGGATGGATGA+TGG | + | chr3_4:9177090-9177109 | Msa0489030:CDS | 40.0% | |
| !! | ATCATAGGATGGATGATGGA+TGG | + | chr3_4:9177094-9177113 | Msa0489030:CDS | 40.0% |
| GTGTCTTGTAAGGTGATTGA+TGG | + | chr3_4:9177162-9177181 | Msa0489030:CDS | 40.0% | |
| ! | AAGGTGATTGATGGTAATCC+TGG | + | chr3_4:9177171-9177190 | Msa0489030:CDS | 40.0% |
| ! | GATTGATGGTAATCCTGGAT+TGG | + | chr3_4:9177176-9177195 | Msa0489030:CDS | 40.0% |
| !!! | TGCAATGGCAGCTGTTTTTT+CGG | + | chr3_4:9177269-9177288 | Msa0489030:CDS | 40.0% |
| ! | TTCGGTTTGTAGAGTTGCTA+AGG | + | chr3_4:9177287-9177306 | Msa0489030:CDS | 40.0% |
| TGCTAAGGAGATTGTTCTTC+AGG | + | chr3_4:9177302-9177321 | Msa0489030:CDS | 40.0% | |
| ! | CTGTTGTTTGCAGGTAATGT+GGG | + | chr3_4:9177361-9177380 | Msa0489030:intron | 40.0% |
| AATGTGGTACTTAAGGCATG+CGG | - | chr3_4:9177648-9177667 | None:intergenic | 40.0% | |
| CAAATGTTTAAAGGTCGCTG+TGG | + | chr3_4:9177988-9178007 | Msa0489030:intron | 40.0% | |
| GAAAGTTTGTCTAATCTCCG+GGG | + | chr3_4:9178038-9178057 | Msa0489030:intron | 40.0% | |
| AATCACGGACTCTAAACCTT+CGG | - | chr3_4:9178203-9178222 | None:intergenic | 40.0% | |
| TAGAGTCCGTGATTGAATCA+TGG | + | chr3_4:9178209-9178228 | Msa0489030:CDS | 40.0% | |
| CAACGCTCAAAGAGTTGAAA+TGG | + | chr3_4:9178314-9178333 | Msa0489030:CDS | 40.0% | |
| CATCTTCTACCATCAAGTCT+CGG | + | chr3_4:9178352-9178371 | Msa0489030:CDS | 40.0% | |
| ATCTTCTACCATCAAGTCTC+GGG | + | chr3_4:9178353-9178372 | Msa0489030:CDS | 40.0% | |
| GTAAACATGGGGAAAAAAGG+CGG | + | chr3_4:9178379-9178398 | Msa0489030:CDS | 40.0% | |
| AGATACTGAAAGTTGACGAC+TGG | + | chr3_4:9178531-9178550 | Msa0489030:three_prime_UTR | 40.0% | |
| AGGGTTGAAACGACATCGTT+TGG | - | chr3_4:9176198-9176217 | None:intergenic | 45.0% | |
| AGCAAGGTCTTCTTCAATGG+CGG | - | chr3_4:9176259-9176278 | None:intergenic | 45.0% | |
| ! | GTTGAAGGATTCAGCGGTTT+TGG | - | chr3_4:9176287-9176306 | None:intergenic | 45.0% |
| CGCTGAATCCTTCAACCATA+TGG | + | chr3_4:9176291-9176310 | Msa0489030:CDS | 45.0% | |
| AGTGAGAGAGTGAAGTTGCA+TGG | - | chr3_4:9176323-9176342 | None:intergenic | 45.0% | |
| !!! | GGGGATTAGGGTTTTGGAAT+TGG | - | chr3_4:9176350-9176369 | None:intergenic | 45.0% |
| GGATTGTGAATTGGGAAGCT+TGG | - | chr3_4:9176425-9176444 | None:intergenic | 45.0% | |
| GGTGGTTGAATCTTCAAGGA+AGG | + | chr3_4:9176470-9176489 | Msa0489030:CDS | 45.0% | |
| !! | ATCAAAACGACGCCGTTTTG+AGG | - | chr3_4:9176610-9176629 | None:intergenic | 45.0% |
| CAACCCGCATTGAAACTACA+CGG | - | chr3_4:9176639-9176658 | None:intergenic | 45.0% | |
| GGAAGTTGAAGGTAACTGGT+GGG | + | chr3_4:9176770-9176789 | Msa0489030:CDS | 45.0% | |
| !! | GAAGAGGGGTTGGTTAGTAT+TGG | + | chr3_4:9176796-9176815 | Msa0489030:CDS | 45.0% |
| !! | AGAGGGGTTGGTTAGTATTG+GGG | + | chr3_4:9176798-9176817 | Msa0489030:CDS | 45.0% |
| ! | CGATGTTTTACGTGGTGTAG+CGG | + | chr3_4:9176867-9176886 | Msa0489030:CDS | 45.0% |
| !! | TTGGAGCTTGTTGGTTGTGA+AGG | + | chr3_4:9177006-9177025 | Msa0489030:CDS | 45.0% |
| !! | TGGAGCTTGTTGGTTGTGAA+GGG | + | chr3_4:9177007-9177026 | Msa0489030:CDS | 45.0% |
| GTTGTGAAGGGAGTTTCGAT+GGG | + | chr3_4:9177019-9177038 | Msa0489030:CDS | 45.0% | |
| CGATGGGATTAAAGCGATTG+GGG | + | chr3_4:9177035-9177054 | Msa0489030:CDS | 45.0% | |
| ! | TGGGGCATGTTGTTTGATGT+TGG | + | chr3_4:9177053-9177072 | Msa0489030:CDS | 45.0% |
| !! | ATGGATGATGGATGGTTAGC+TGG | + | chr3_4:9177102-9177121 | Msa0489030:CDS | 45.0% |
| ! | TGATGGTAATCCTGGATTGG+AGG | + | chr3_4:9177179-9177198 | Msa0489030:CDS | 45.0% |
| ! | TCCTGGATTGGAGGAACATT+TGG | + | chr3_4:9177188-9177207 | Msa0489030:CDS | 45.0% |
| ! | CCTGGATTGGAGGAACATTT+GGG | + | chr3_4:9177189-9177208 | Msa0489030:CDS | 45.0% |
| ! | CTGGATTGGAGGAACATTTG+GGG | + | chr3_4:9177190-9177209 | Msa0489030:CDS | 45.0% |
| TCTTCAGGATTGTTGGGGTT+TGG | + | chr3_4:9177317-9177336 | Msa0489030:CDS | 45.0% | |
| GATTGTTGGGGTTTGGATGA+TGG | + | chr3_4:9177324-9177343 | Msa0489030:CDS | 45.0% | |
| !! | GGTTTGGATGATGGCGTTTT+CGG | + | chr3_4:9177333-9177352 | Msa0489030:CDS | 45.0% |
| ! | GCTGTTGTTTGCAGGTAATG+TGG | + | chr3_4:9177360-9177379 | Msa0489030:intron | 45.0% |
| TGTTAGGAGTTAAGCCTGTG+AGG | + | chr3_4:9177583-9177602 | Msa0489030:intron | 45.0% | |
| !!! | AATGGACTAGTCTTTTGGGC+CGG | - | chr3_4:9177614-9177633 | None:intergenic | 45.0% |
| CATGCGGTTCTCTCACATAA+TGG | - | chr3_4:9177632-9177651 | None:intergenic | 45.0% | |
| GTCCGTGATTGAATCATGGA+AGG | + | chr3_4:9178213-9178232 | Msa0489030:CDS | 45.0% | |
| CGCTCAAAGAGTTGAAATGG+AGG | + | chr3_4:9178317-9178336 | Msa0489030:CDS | 45.0% | |
| TCTTCTACCATCAAGTCTCG+GGG | + | chr3_4:9178354-9178373 | Msa0489030:CDS | 45.0% | |
| TTTACTTCCCCGAGACTTGA+TGG | - | chr3_4:9178364-9178383 | None:intergenic | 45.0% | |
| AAGTCTCGGGGAAGTAAACA+TGG | + | chr3_4:9178366-9178385 | Msa0489030:CDS | 45.0% | |
| AGTCTCGGGGAAGTAAACAT+GGG | + | chr3_4:9178367-9178386 | Msa0489030:CDS | 45.0% | |
| CAGATTACATCTCTAGGTGG+AGG | - | chr3_4:9178710-9178729 | None:intergenic | 45.0% | |
| !!! | AGCGGTTTTGGAGTTCAGCA+AGG | - | chr3_4:9176275-9176294 | None:intergenic | 50.0% |
| CGTCGGAGAGAAGAAGAGTT+AGG | - | chr3_4:9176381-9176400 | None:intergenic | 50.0% | |
| CCGCATTGAAACTACACGGT+GGG | - | chr3_4:9176635-9176654 | None:intergenic | 50.0% | |
| CCCACCGTGTAGTTTCAATG+CGG | + | chr3_4:9176632-9176651 | Msa0489030:CDS | 50.0% | |
| CCACCGTGTAGTTTCAATGC+GGG | + | chr3_4:9176633-9176652 | Msa0489030:CDS | 50.0% | |
| !! | CAATGCGGGTTGATACAGAG+TGG | + | chr3_4:9176647-9176666 | Msa0489030:CDS | 50.0% |
| CGGAAGTTGAAGGTAACTGG+TGG | + | chr3_4:9176769-9176788 | Msa0489030:CDS | 50.0% | |
| GTAACTGGTGGGAGTGAAGA+GGG | + | chr3_4:9176781-9176800 | Msa0489030:CDS | 50.0% | |
| TAACTGGTGGGAGTGAAGAG+GGG | + | chr3_4:9176782-9176801 | Msa0489030:CDS | 50.0% | |
| GGTTGTGAAGGGAGTTTCGA+TGG | + | chr3_4:9177018-9177037 | Msa0489030:CDS | 50.0% | |
| CCCAAATGTTCCTCCAATCC+AGG | - | chr3_4:9177192-9177211 | None:intergenic | 50.0% | |
| !! | GGATGATGGCGTTTTCGGTT+TGG | + | chr3_4:9177338-9177357 | Msa0489030:CDS | 50.0% |
| !! | TCGGTTTGGCTGTTGTTTGC+AGG | + | chr3_4:9177352-9177371 | Msa0489030:CDS | 50.0% |
| TTAAGCCTGTGAGGAGAGTC+CGG | + | chr3_4:9177592-9177611 | Msa0489030:intron | 50.0% | |
| TGCTCGTTGCTTACAACCGA+AGG | + | chr3_4:9178184-9178203 | Msa0489030:CDS | 50.0% | |
| GTAAATAAGGTCGCGAGTGC+AGG | - | chr3_4:9178295-9178314 | None:intergenic | 50.0% | |
| GTCTCGGGGAAGTAAACATG+GGG | + | chr3_4:9178368-9178387 | Msa0489030:CDS | 50.0% | |
| GACTCACTGCAGTCAGAGAT+CGG | - | chr3_4:9178666-9178685 | None:intergenic | 50.0% | |
| GGGAGTAAAGTCACTCAGCA+TGG | - | chr3_4:9178797-9178816 | None:intergenic | 50.0% | |
| GGCGAGGACCATATGGTTGA+AGG | - | chr3_4:9176302-9176321 | None:intergenic | 55.0% | |
| GTTGCATGGCGAGGACCATA+TGG | - | chr3_4:9176309-9176328 | None:intergenic | 55.0% | |
| GAGAGTGAAGTTGCATGGCG+AGG | - | chr3_4:9176318-9176337 | None:intergenic | 55.0% | |
| CCCGCATTGAAACTACACGG+TGG | - | chr3_4:9176636-9176655 | None:intergenic | 55.0% | |
| GGTAACTGGTGGGAGTGAAG+AGG | + | chr3_4:9176780-9176799 | Msa0489030:CDS | 55.0% | |
| TCACTCAGCATGGAGTGAGC+TGG | - | chr3_4:9178787-9178806 | None:intergenic | 55.0% | |
| TGGTGGGAGTGAAGAGGGGT+TGG | + | chr3_4:9176786-9176805 | Msa0489030:CDS | 60.0% | |
| TTGGGCCGGACTCTCCTCAC+AGG | - | chr3_4:9177600-9177619 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 9176116 | 9178895 | 9176116 | ID=Msa0489030;Name=Msa0489030 |
| chr3_4 | mRNA | 9176116 | 9178895 | 9176116 | ID=Msa0489030-mRNA-1;Parent=Msa0489030;Name=Msa0489030-mRNA-1;_AED=0.00;_eAED=0.00;_QI=86|1|1|1|1|1|2|466|481 |
| chr3_4 | exon | 9176116 | 9177373 | 9176116 | ID=Msa0489030-mRNA-1:exon:3001;Parent=Msa0489030-mRNA-1 |
| chr3_4 | exon | 9178156 | 9178895 | 9178156 | ID=Msa0489030-mRNA-1:exon:3002;Parent=Msa0489030-mRNA-1 |
| chr3_4 | five_prime_UTR | 9176116 | 9176201 | 9176116 | ID=Msa0489030-mRNA-1:five_prime_utr;Parent=Msa0489030-mRNA-1 |
| chr3_4 | CDS | 9176202 | 9177373 | 9176202 | ID=Msa0489030-mRNA-1:cds;Parent=Msa0489030-mRNA-1 |
| chr3_4 | CDS | 9178156 | 9178429 | 9178156 | ID=Msa0489030-mRNA-1:cds;Parent=Msa0489030-mRNA-1 |
| chr3_4 | three_prime_UTR | 9178430 | 9178895 | 9178430 | ID=Msa0489030-mRNA-1:three_prime_utr;Parent=Msa0489030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
