Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0173170 | G7I9H5 | 100.000 | 202 | 0 | 0 | 1 | 202 | 1 | 202 | 6.22e-141 | 400 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006880 | Msa0173170 | 0.818351 | 2.051495e-52 | -8.615850e-47 |
| Msa0008220 | Msa0173170 | 0.804389 | 2.211873e-49 | -8.615850e-47 |
| Msa0010770 | Msa0173170 | 0.801641 | 8.182906e-49 | -8.615850e-47 |
| Msa0014830 | Msa0173170 | 0.807477 | 4.959485e-50 | -8.615850e-47 |
| Msa0031820 | Msa0173170 | 0.813929 | 1.995547e-51 | -8.615850e-47 |
| Msa0033880 | Msa0173170 | 0.833310 | 5.740885e-56 | -8.615850e-47 |
| Msa0039250 | Msa0173170 | 0.808440 | 3.093375e-50 | -8.615850e-47 |
| Msa0047250 | Msa0173170 | 0.826326 | 2.884761e-54 | -8.615850e-47 |
| Msa0047280 | Msa0173170 | 0.801561 | 8.497072e-49 | -8.615850e-47 |
| Msa0055100 | Msa0173170 | 0.802963 | 4.371492e-49 | -8.615850e-47 |
| Msa0055150 | Msa0173170 | 0.802489 | 5.474802e-49 | -8.615850e-47 |
| Msa0057370 | Msa0173170 | 0.809454 | 1.877040e-50 | -8.615850e-47 |
| Msa0065010 | Msa0173170 | 0.809959 | 1.461996e-50 | -8.615850e-47 |
| Msa0070430 | Msa0173170 | 0.834544 | 2.819012e-56 | -8.615850e-47 |
| Msa0077900 | Msa0173170 | 0.822457 | 2.345005e-53 | -8.615850e-47 |
| Msa0080420 | Msa0173170 | 0.838312 | 3.098748e-57 | -8.615850e-47 |
| Msa0097950 | Msa0173170 | 0.817908 | 2.583783e-52 | -8.615850e-47 |
| Msa0100800 | Msa0173170 | 0.806063 | 9.868797e-50 | -8.615850e-47 |
| Msa0101180 | Msa0173170 | 0.800554 | 1.365079e-48 | -8.615850e-47 |
| Msa0108870 | Msa0173170 | 0.842635 | 2.293096e-58 | -8.615850e-47 |
| Msa0115370 | Msa0173170 | 0.806613 | 7.555754e-50 | -8.615850e-47 |
| Msa0123510 | Msa0173170 | 0.809478 | 1.854970e-50 | -8.615850e-47 |
| Msa0126770 | Msa0173170 | 0.843403 | 1.431754e-58 | -8.615850e-47 |
| Msa0126880 | Msa0173170 | 0.811017 | 8.638293e-51 | -8.615850e-47 |
| Msa0127040 | Msa0173170 | 0.801149 | 1.031610e-48 | -8.615850e-47 |
| Msa0127850 | Msa0173170 | 0.831517 | 1.595776e-55 | -8.615850e-47 |
| Msa0131450 | Msa0173170 | 0.829779 | 4.251861e-55 | -8.615850e-47 |
| Msa0133720 | Msa0173170 | 0.819689 | 1.018056e-52 | -8.615850e-47 |
| Msa0133820 | Msa0173170 | 0.807234 | 5.584109e-50 | -8.615850e-47 |
| Msa0135420 | Msa0173170 | 0.803444 | 3.475410e-49 | -8.615850e-47 |
| Msa0147980 | Msa0173170 | 0.813760 | 2.173949e-51 | -8.615850e-47 |
| Msa0165440 | Msa0173170 | 0.830317 | 3.143433e-55 | -8.615850e-47 |
| Msa0166750 | Msa0173170 | 0.820611 | 6.261275e-53 | -8.615850e-47 |
| Msa0171850 | Msa0173170 | 0.832480 | 9.230994e-56 | -8.615850e-47 |
| Msa0173170 | Msa0174000 | 0.827087 | 1.899021e-54 | -8.615850e-47 |
| Msa0173170 | Msa0177270 | 0.811768 | 5.935291e-51 | -8.615850e-47 |
| Msa0173170 | Msa0198520 | 0.830525 | 2.795841e-55 | -8.615850e-47 |
| Msa0173170 | Msa0198530 | 0.830713 | 2.515781e-55 | -8.615850e-47 |
| Msa0173170 | Msa0267870 | 0.819184 | 1.327251e-52 | -8.615850e-47 |
| Msa0173170 | Msa0291520 | 0.835856 | 1.314994e-56 | -8.615850e-47 |
| Msa0173170 | Msa0295590 | 0.800810 | 1.210454e-48 | -8.615850e-47 |
| Msa0173170 | Msa0308220 | 0.803356 | 3.625143e-49 | -8.615850e-47 |
| Msa0173170 | Msa0311060 | 0.803677 | 3.109833e-49 | -8.615850e-47 |
| Msa0173170 | Msa0313930 | 0.808610 | 2.845431e-50 | -8.615850e-47 |
| Msa0173170 | Msa0342290 | 0.800453 | 1.431168e-48 | -8.615850e-47 |
| Msa0173170 | Msa0343190 | 0.819854 | 9.334764e-53 | -8.615850e-47 |
| Msa0173170 | Msa0346990 | 0.808551 | 2.930007e-50 | -8.615850e-47 |
| Msa0173170 | Msa0376280 | 0.802634 | 5.110968e-49 | -8.615850e-47 |
| Msa0173170 | Msa0378970 | 0.815294 | 9.950235e-52 | -8.615850e-47 |
| Msa0173170 | Msa0384670 | 0.809623 | 1.726754e-50 | -8.615850e-47 |
| Msa0173170 | Msa0384880 | 0.830822 | 2.364810e-55 | -8.615850e-47 |
| Msa0173170 | Msa0392200 | 0.807158 | 5.793979e-50 | -8.615850e-47 |
| Msa0173170 | Msa0394690 | 0.818799 | 1.622923e-52 | -8.615850e-47 |
| Msa0173170 | Msa0431770 | 0.822057 | 2.903398e-53 | -8.615850e-47 |
| Msa0173170 | Msa0434570 | 0.812745 | 3.631895e-51 | -8.615850e-47 |
| Msa0173170 | Msa0434770 | 0.824084 | 9.775212e-54 | -8.615850e-47 |
| Msa0173170 | Msa0439890 | 0.841112 | 5.789181e-58 | -8.615850e-47 |
| Msa0173170 | Msa0442310 | 0.804903 | 1.727918e-49 | -8.615850e-47 |
| Msa0173170 | Msa0443430 | 0.812581 | 3.944166e-51 | -8.615850e-47 |
| Msa0173170 | Msa0461590 | 0.813563 | 2.402451e-51 | -8.615850e-47 |
| Msa0173170 | Msa0462880 | 0.808964 | 2.390464e-50 | -8.615850e-47 |
| Msa0173170 | Msa0474700 | 0.819563 | 1.087803e-52 | -8.615850e-47 |
| Msa0173170 | Msa0478580 | 0.825963 | 3.518180e-54 | -8.615850e-47 |
| Msa0173170 | Msa0505150 | 0.801539 | 8.586260e-49 | -8.615850e-47 |
| Msa0173170 | Msa0505380 | 0.804441 | 2.157207e-49 | -8.615850e-47 |
| Msa0173170 | Msa0527910 | 0.804855 | 1.768171e-49 | -8.615850e-47 |
| Msa0173170 | Msa0547990 | 0.825396 | 4.794873e-54 | -8.615850e-47 |
| Msa0173170 | Msa0550570 | 0.832080 | 1.159202e-55 | -8.615850e-47 |
| Msa0173170 | Msa0583500 | 0.802386 | 5.749745e-49 | -8.615850e-47 |
| Msa0173170 | Msa0584550 | 0.807162 | 5.784327e-50 | -8.615850e-47 |
| Msa0173170 | Msa0593700 | 0.816626 | 5.020074e-52 | -8.615850e-47 |
| Msa0173170 | Msa0606810 | 0.807179 | 5.734850e-50 | -8.615850e-47 |
| Msa0173170 | Msa0610090 | 0.810069 | 1.384476e-50 | -8.615850e-47 |
| Msa0173170 | Msa0614510 | 0.806940 | 6.443000e-50 | -8.615850e-47 |
| Msa0173170 | Msa0618930 | 0.811008 | 8.677987e-51 | -8.615850e-47 |
| Msa0173170 | Msa0619180 | 0.808230 | 3.429992e-50 | -8.615850e-47 |
| Msa0173170 | Msa0619920 | 0.839211 | 1.814276e-57 | -8.615850e-47 |
| Msa0173170 | Msa0620330 | 0.813085 | 3.059296e-51 | -8.615850e-47 |
| Msa0173170 | Msa0633570 | 0.806049 | 9.935442e-50 | -8.615850e-47 |
| Msa0173170 | Msa0640500 | 0.801656 | 8.124459e-49 | -8.615850e-47 |
| Msa0173170 | Msa0644030 | 0.822247 | 2.624099e-53 | -8.615850e-47 |
| Msa0173170 | Msa0646130 | 0.806788 | 6.939120e-50 | -8.615850e-47 |
| Msa0173170 | Msa0647430 | 0.800089 | 1.697337e-48 | -8.615850e-47 |
| Msa0173170 | Msa0651150 | 0.801690 | 7.995234e-49 | -8.615850e-47 |
| Msa0173170 | Msa0652300 | 0.839138 | 1.895143e-57 | -8.615850e-47 |
| Msa0173170 | Msa0658480 | 0.812386 | 4.351826e-51 | -8.615850e-47 |
| Msa0173170 | Msa0659990 | 0.819525 | 1.109611e-52 | -8.615850e-47 |
| Msa0173170 | Msa0679100 | 0.821921 | 3.122301e-53 | -8.615850e-47 |
| Msa0173170 | Msa0704800 | 0.817105 | 3.917577e-52 | -8.615850e-47 |
| Msa0173170 | Msa0706390 | 0.812809 | 3.516175e-51 | -8.615850e-47 |
| Msa0173170 | Msa0735310 | 0.820496 | 6.650774e-53 | -8.615850e-47 |
| Msa0173170 | Msa0742510 | 0.809693 | 1.667864e-50 | -8.615850e-47 |
| Msa0173170 | Msa0743530 | 0.822685 | 2.075585e-53 | -8.615850e-47 |
| Msa0173170 | Msa0744090 | 0.829305 | 5.546413e-55 | -8.615850e-47 |
| Msa0173170 | Msa0744100 | 0.832749 | 7.913887e-56 | -8.615850e-47 |
| Msa0173170 | Msa0745200 | 0.817616 | 3.007418e-52 | -8.615850e-47 |
| Msa0173170 | Msa0756930 | 0.834263 | 3.316101e-56 | -8.615850e-47 |
| Msa0173170 | Msa0774750 | 0.802599 | 5.196530e-49 | -8.615850e-47 |
| Msa0173170 | Msa0781270 | 0.824852 | 6.446338e-54 | -8.615850e-47 |
| Msa0173170 | Msa0788120 | 0.803362 | 3.614271e-49 | -8.615850e-47 |
| Msa0173170 | Msa0795660 | 0.819619 | 1.056274e-52 | -8.615850e-47 |
| Msa0173170 | Msa0818170 | 0.819554 | 1.092972e-52 | -8.615850e-47 |
| Msa0173170 | Msa0822170 | 0.846636 | 1.917904e-59 | -8.615850e-47 |
| Msa0173170 | Msa0822180 | 0.832436 | 9.466119e-56 | -8.615850e-47 |
| Msa0173170 | Msa0825270 | 0.840475 | 8.505308e-58 | -8.615850e-47 |
| Msa0173170 | Msa0825280 | 0.827458 | 1.547110e-54 | -8.615850e-47 |
| Msa0173170 | Msa0831100 | 0.800829 | 1.199191e-48 | -8.615850e-47 |
| Msa0173170 | Msa0836500 | 0.823909 | 1.074480e-53 | -8.615850e-47 |
| Msa0173170 | Msa0851470 | 0.825191 | 5.362151e-54 | -8.615850e-47 |
| Msa0173170 | Msa0864420 | 0.801384 | 9.237799e-49 | -8.615850e-47 |
| Msa0173170 | Msa0865570 | 0.807288 | 5.438704e-50 | -8.615850e-47 |
| Msa0173170 | Msa0869010 | 0.823317 | 1.477954e-53 | -8.615850e-47 |
| Msa0173170 | Msa0888940 | 0.824238 | 8.995802e-54 | -8.615850e-47 |
| Msa0173170 | Msa0899350 | 0.830281 | 3.207782e-55 | -8.615850e-47 |
| Msa0173170 | Msa0928120 | 0.813440 | 2.556437e-51 | -8.615850e-47 |
| Msa0173170 | Msa0940830 | 0.802025 | 6.822680e-49 | -8.615850e-47 |
| Msa0173170 | Msa0943170 | 0.810031 | 1.410744e-50 | -8.615850e-47 |
| Msa0173170 | Msa0963020 | 0.809206 | 2.122126e-50 | -8.615850e-47 |
| Msa0173170 | Msa0965020 | 0.800404 | 1.464478e-48 | -8.615850e-47 |
| Msa0173170 | Msa0973320 | 0.800452 | 1.432014e-48 | -8.615850e-47 |
| Msa0173170 | Msa0980940 | 0.827453 | 1.551420e-54 | -8.615850e-47 |
| Msa0173170 | Msa0981430 | 0.817850 | 2.662805e-52 | -8.615850e-47 |
| Msa0173170 | Msa1025940 | 0.834795 | 2.437510e-56 | -8.615850e-47 |
| Msa0173170 | Msa1029970 | 0.808279 | 3.348300e-50 | -8.615850e-47 |
| Msa0173170 | Msa1030930 | 0.821000 | 5.094863e-53 | -8.615850e-47 |
| Msa0173170 | Msa1044430 | 0.806490 | 8.019297e-50 | -8.615850e-47 |
| Msa0173170 | Msa1050420 | 0.803831 | 2.888663e-49 | -8.615850e-47 |
| Msa0173170 | Msa1070050 | 0.818218 | 2.198384e-52 | -8.615850e-47 |
| Msa0173170 | Msa1070390 | 0.819956 | 8.846579e-53 | -8.615850e-47 |
| Msa0173170 | Msa1083880 | 0.827738 | 1.325364e-54 | -8.615850e-47 |
| Msa0173170 | Msa1087580 | 0.845287 | 4.461776e-59 | -8.615850e-47 |
| Msa0173170 | Msa1093330 | 0.800713 | 1.266790e-48 | -8.615850e-47 |
| Msa0173170 | Msa1113590 | 0.808498 | 3.006685e-50 | -8.615850e-47 |
| Msa0173170 | Msa1158230 | 0.809992 | 1.438323e-50 | -8.615850e-47 |
| Msa0173170 | Msa1171830 | 0.823767 | 1.160257e-53 | -8.615850e-47 |
| Msa0173170 | Msa1179980 | 0.806284 | 8.862316e-50 | -8.615850e-47 |
| Msa0173170 | Msa1199710 | 0.802607 | 5.178672e-49 | -8.615850e-47 |
| Msa0173170 | Msa1201830 | 0.827200 | 1.783912e-54 | -8.615850e-47 |
| Msa0173170 | Msa1202580 | 0.802624 | 5.135151e-49 | -8.615850e-47 |
| Msa0173170 | Msa1203900 | 0.810006 | 1.428476e-50 | -8.615850e-47 |
| Msa0173170 | Msa1206650 | 0.819891 | 9.150926e-53 | -8.615850e-47 |
| Msa0173170 | Msa1223330 | 0.802910 | 4.482915e-49 | -8.615850e-47 |
| Msa0173170 | Msa1226610 | 0.820995 | 5.109114e-53 | -8.615850e-47 |
| Msa0173170 | Msa1227690 | 0.804835 | 1.785396e-49 | -8.615850e-47 |
| Msa0173170 | Msa1253810 | 0.830946 | 2.204787e-55 | -8.615850e-47 |
| Msa0173170 | Msa1270620 | 0.806370 | 8.502613e-50 | -8.615850e-47 |
| Msa0173170 | Msa1270690 | 0.800311 | 1.529936e-48 | -8.615850e-47 |
| Msa0173170 | Msa1278900 | 0.815206 | 1.040940e-51 | -8.615850e-47 |
| Msa0173170 | Msa1294840 | 0.832105 | 1.143148e-55 | -8.615850e-47 |
| Msa0173170 | Msa1294960 | 0.825474 | 4.597542e-54 | -8.615850e-47 |
| Msa0173170 | Msa1306390 | 0.808369 | 3.204083e-50 | -8.615850e-47 |
| Msa0173170 | Msa1317270 | 0.825439 | 4.684084e-54 | -8.615850e-47 |
| Msa0173170 | Msa1320820 | 0.800443 | 1.437948e-48 | -8.615850e-47 |
| Msa0173170 | Msa1323990 | 0.803473 | 3.428017e-49 | -8.615850e-47 |
| Msa0173170 | Msa1329450 | 0.819051 | 1.422554e-52 | -8.615850e-47 |
| Msa0173170 | Msa1340830 | 0.812011 | 5.254196e-51 | -8.615850e-47 |
| Msa0173170 | Msa1359560 | 0.800783 | 1.225749e-48 | -8.615850e-47 |
| Msa0173170 | Msa1365860 | 0.821541 | 3.821848e-53 | -8.615850e-47 |
| Msa0173170 | Msa1372310 | 0.807750 | 4.339165e-50 | -8.615850e-47 |
| Msa0173170 | Msa1380970 | 0.807113 | 5.923353e-50 | -8.615850e-47 |
| Msa0173170 | Msa1389850 | 0.805338 | 1.400632e-49 | -8.615850e-47 |
| Msa0173170 | Msa1402110 | 0.916019 | 2.943019e-85 | -8.615850e-47 |
| Msa0173170 | Msa1411950 | 0.802342 | 5.871211e-49 | -8.615850e-47 |
| Msa0173170 | Msa1416260 | 0.803020 | 4.255146e-49 | -8.615850e-47 |
| Msa0173170 | Msa1424780 | 0.816606 | 5.070222e-52 | -8.615850e-47 |
| Msa0173170 | Msa1432480 | 0.802187 | 6.318532e-49 | -8.615850e-47 |
| Msa0173170 | Msa1435770 | 0.806353 | 8.570448e-50 | -8.615850e-47 |
| Msa0173170 | Msa1450720 | 0.809540 | 1.799228e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0173170 | MtrunA17_Chr1g0192741 | 100.000 | 202 | 0 | 0 | 1 | 202 | 1 | 202 | 1.20e-144 | 400 |
| Msa0173170 | MtrunA17_Chr4g0057021 | 41.121 | 107 | 63 | 0 | 6 | 112 | 13 | 119 | 2.78e-21 | 87.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0173170 | AT1G56420.1 | 64.000 | 200 | 51 | 5 | 1 | 196 | 1 | 183 | 3.35e-76 | 227 |
| Msa0173170 | AT1G12530.1 | 38.393 | 112 | 69 | 0 | 1 | 112 | 2 | 113 | 7.13e-20 | 83.6 |
Find 148 sgRNAs with CRISPR-Local
Find 434 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTTATTTCCACTTCTAAA+TGG | 0.197156 | 1_4:-58384950 | Msa0173170:CDS |
| AAGCTTCAGTGAAACAAATT+TGG | 0.204215 | 1_4:-58384825 | Msa0173170:CDS |
| AACAAACAGACCAATATTAT+TGG | 0.244096 | 1_4:-58384065 | Msa0173170:three_prime_UTR |
| ATGTATGTCACATGAATTTA+AGG | 0.250211 | 1_4:-58383717 | Msa0173170:three_prime_UTR |
| TCTGCTGTCGGCCTCCTTAT+CGG | 0.250465 | 1_4:+58384916 | None:intergenic |
| TTCTTCGAAGGCACACATTC+AGG | 0.271305 | 1_4:-58383772 | Msa0173170:three_prime_UTR |
| AGGCAAAATATGGAAGAATT+TGG | 0.277793 | 1_4:+58389051 | None:intergenic |
| GGATATGAAAACGCAATAAT+TGG | 0.282027 | 1_4:+58389109 | None:intergenic |
| ACAATCTTTGGTTTGCTTCA+TGG | 0.285059 | 1_4:-58384270 | Msa0173170:three_prime_UTR |
| CTTCATGGTAAATATGCTTC+CGG | 0.291844 | 1_4:-58384255 | Msa0173170:three_prime_UTR |
| ATTGCATTGATGACAATCTT+TGG | 0.297658 | 1_4:-58384282 | Msa0173170:three_prime_UTR |
| TGAGCACACATGTATTATTA+TGG | 0.308830 | 1_4:-58383092 | Msa0173170:three_prime_UTR |
| TTTCGCGAGAAGGCAAAATA+TGG | 0.308901 | 1_4:+58389041 | None:intergenic |
| ACAAACAGACCAATATTATT+GGG | 0.309963 | 1_4:-58384064 | Msa0173170:three_prime_UTR |
| TCAATTGATTGAGCAACATT+TGG | 0.312130 | 1_4:-58383414 | Msa0173170:three_prime_UTR |
| TTTGAACATAATTATTGTTT+GGG | 0.314079 | 1_4:-58384416 | Msa0173170:three_prime_UTR |
| AGAAAGCATCAAAATCAGTT+TGG | 0.321915 | 1_4:-58385060 | Msa0173170:CDS |
| TTATGACACTTCACTTTCAA+TGG | 0.327535 | 1_4:+58383227 | Msa0173160:CDS |
| CGCATCAAATAGCTCTCTTT+TGG | 0.330709 | 1_4:+58388270 | None:intergenic |
| AATGACAAATTCTGTGTTAA+GGG | 0.342757 | 1_4:-58383811 | Msa0173170:three_prime_UTR |
| TTTGCTCTCCCCAATAATAT+TGG | 0.344387 | 1_4:+58384055 | None:intergenic |
| AAATGACAAATTCTGTGTTA+AGG | 0.348423 | 1_4:-58383812 | Msa0173170:three_prime_UTR |
| AAATATATTGTTGAACTTGT+AGG | 0.350165 | 1_4:-58384643 | Msa0173170:three_prime_UTR |
| GAAAGCATCAAAATCAGTTT+GGG | 0.368981 | 1_4:-58385059 | Msa0173170:CDS |
| CTGCTGTCGGCCTCCTTATC+GGG | 0.370227 | 1_4:+58384917 | None:intergenic |
| AAGGCACACATTCAGGGTCT+TGG | 0.371784 | 1_4:-58383765 | Msa0173170:three_prime_UTR |
| CAAGTCTTTGAAATTGATAA+AGG | 0.372042 | 1_4:+58384713 | None:intergenic |
| ACGGTGACTGCTATTGCTTA+TGG | 0.375941 | 1_4:-58389004 | Msa0173170:exon |
| ACGGCACAATTGATGCTCTT+AGG | 0.378868 | 1_4:-58388930 | Msa0173170:CDS |
| TTGGTCTGTTTCTCAGCACC+AGG | 0.378931 | 1_4:+58388289 | None:intergenic |
| CAATTGATTGAGCAACATTT+GGG | 0.379679 | 1_4:-58383413 | Msa0173170:three_prime_UTR |
| ATTGCTTATGGCTTCTTCTT+CGG | 0.385395 | 1_4:-58388992 | Msa0173170:exon |
| AATTATAACAACCCAACTTC+AGG | 0.388515 | 1_4:+58383040 | Msa0173160:CDS |
| CCATTTAGAAGTGGAAATAA+AGG | 0.396205 | 1_4:+58384950 | None:intergenic |
| GCCGACAGCAGAAAAGAAAA+AGG | 0.398061 | 1_4:-58384905 | Msa0173170:CDS |
| CAGCGACTCTAATACATCTT+CGG | 0.400938 | 1_4:+58388960 | None:intergenic |
| ACCTACTCTAAGTGCGTGTT+TGG | 0.414426 | 1_4:-58383949 | Msa0173170:three_prime_UTR |
| GGCATAATACACAGCTTTGA+TGG | 0.416631 | 1_4:+58384589 | None:intergenic |
| AAAATCCATCCTTGATTAGC+TGG | 0.422726 | 1_4:-58384178 | Msa0173170:three_prime_UTR |
| TGATGTGCCCCACACTCTAT+AGG | 0.429285 | 1_4:+58389273 | None:intergenic |
| ACAGCTTCTCTTAATTTATG+TGG | 0.431718 | 1_4:-58383548 | Msa0173170:intron |
| TTCATGGTAAATATGCTTCC+GGG | 0.436336 | 1_4:-58384254 | Msa0173170:three_prime_UTR |
| TAGGTGAAGTTGAATTCAAA+TGG | 0.442427 | 1_4:+58383967 | None:intergenic |
| GCAGCAATATCAGAAGGTTC+TGG | 0.447110 | 1_4:-58384743 | Msa0173170:CDS |
| ATACAAGCACACAGTTTGAT+TGG | 0.447333 | 1_4:+58383460 | Msa0173160:CDS |
| CAAACTCTTATTTATATGAA+AGG | 0.450263 | 1_4:+58384550 | None:intergenic |
| ATCCGATGATGTCTTCCTCT+TGG | 0.452740 | 1_4:+58383190 | Msa0173160:CDS |
| GTGGAAATAAAGGAGGTTCC+TGG | 0.453242 | 1_4:+58384960 | None:intergenic |
| GAGTTCAACAAGTTTCTGTA+AGG | 0.458707 | 1_4:-58384684 | Msa0173170:three_prime_UTR |
| GAGGTTCCTGGCCACTCAAT+CGG | 0.460623 | 1_4:+58384972 | None:intergenic |
| AGCGACTCTAATACATCTTC+GGG | 0.462062 | 1_4:+58388961 | None:intergenic |
| ATAATTGGAGGTCGTATTGA+TGG | 0.462824 | 1_4:+58389124 | None:intergenic |
| CTGTGACTTACTCAAGCTCT+TGG | 0.467413 | 1_4:+58388242 | None:intergenic |
| TCTTCGAAGGCACACATTCA+GGG | 0.469273 | 1_4:-58383771 | Msa0173170:three_prime_UTR |
| TTATGGAATACTATAATCAA+TGG | 0.470104 | 1_4:-58383075 | Msa0173170:three_prime_UTR |
| GTAAGGGAAGTGATCACATC+TGG | 0.474897 | 1_4:-58384667 | Msa0173170:three_prime_UTR |
| TGAAAGCTTACCTCTATGCT+TGG | 0.477472 | 1_4:+58384090 | None:intergenic |
| ATGTCTTCCTCTTGGAGTCA+AGG | 0.477708 | 1_4:+58383198 | Msa0173160:CDS |
| TCGGCCTCCTTATCGGGTTG+TGG | 0.478473 | 1_4:+58384923 | None:intergenic |
| TGCAAGTCGCCTGACATCCT+TGG | 0.479408 | 1_4:-58384000 | Msa0173170:three_prime_UTR |
| CAATGTCATGGTTCATGCTA+GGG | 0.482802 | 1_4:-58384458 | Msa0173170:three_prime_UTR |
| GGATCAGAGGACCTGGTGGC+GGG | 0.484671 | 1_4:+58384767 | None:intergenic |
| AAAGATGGCTGAACAGAGTA+AGG | 0.486628 | 1_4:-58388323 | Msa0173170:CDS |
| TTTGGTAAATCTTGAATTCA+CGG | 0.487208 | 1_4:-58383931 | Msa0173170:three_prime_UTR |
| GACTATTCGATTTCGCGAGA+AGG | 0.496360 | 1_4:+58389031 | None:intergenic |
| TGGAGAACCACAACCCGATA+AGG | 0.500687 | 1_4:-58384930 | Msa0173170:CDS |
| AGGATCAGAGGACCTGGTGG+CGG | 0.500929 | 1_4:+58384766 | None:intergenic |
| AGATCTATCAAACACACATC+TGG | 0.501769 | 1_4:+58389241 | None:intergenic |
| GGTCTTGGATTGAATAAAAG+TGG | 0.502506 | 1_4:-58383750 | Msa0173170:three_prime_UTR |
| TCAATTTCAAAGACTTGACC+AGG | 0.505935 | 1_4:-58384707 | Msa0173170:exon |
| GCTCAAACTCCAAGGATGTC+AGG | 0.509547 | 1_4:+58383991 | None:intergenic |
| TTTAACCAATCTGGTCCACT+TGG | 0.513737 | 1_4:-58383285 | Msa0173170:three_prime_UTR |
| TAATACACAGCTTTGATGGC+TGG | 0.513965 | 1_4:+58384593 | None:intergenic |
| CAAGAGTACTACTATAAAGA+TGG | 0.515439 | 1_4:-58388338 | Msa0173170:CDS |
| TCAATGTCATGGTTCATGCT+AGG | 0.517405 | 1_4:-58384459 | Msa0173170:three_prime_UTR |
| TGGATATTGATTTGTATCGA+TGG | 0.517555 | 1_4:+58389071 | None:intergenic |
| TGGGTGCCGTGTTAGTTTCG+AGG | 0.518042 | 1_4:+58389144 | None:intergenic |
| GAACCTTCTGATATTGCTGC+AGG | 0.521199 | 1_4:+58384746 | None:intergenic |
| CGATGGATATAGACCAATGT+TGG | 0.523008 | 1_4:+58389088 | None:intergenic |
| ATCAAACTGTGTGCTTGTAT+TGG | 0.523069 | 1_4:-58383457 | Msa0173170:three_prime_UTR |
| TCATTGAATTTGCGAAGGCT+AGG | 0.523598 | 1_4:-58384501 | Msa0173170:three_prime_UTR |
| ATTTATATGAAAGGCATACA+AGG | 0.528076 | 1_4:+58384559 | None:intergenic |
| CAGAAACTTGTTGAACTCCC+TGG | 0.528464 | 1_4:+58384689 | None:intergenic |
| TGCACATATGCTTGATGAGT+AGG | 0.528989 | 1_4:-58384217 | Msa0173170:three_prime_UTR |
| TGGTCTGTTTCTCAGCACCA+GGG | 0.531608 | 1_4:+58388290 | None:intergenic |
| CTTCCACATTCACATTGATG+TGG | 0.532084 | 1_4:+58383847 | None:intergenic |
| GGTCTTCTGATCCCGCCACC+AGG | 0.538253 | 1_4:-58384778 | Msa0173170:CDS |
| AGACAACAATGGCCTGGGAA+AGG | 0.538377 | 1_4:-58385026 | Msa0173170:CDS |
| TGATGAGGGAAGGAGGAAGG+AGG | 0.538633 | 1_4:+58389196 | None:intergenic |
| AACATTTGGGCAAACTACAC+TGG | 0.542754 | 1_4:-58383400 | Msa0173170:three_prime_UTR |
| AGTCGCCATCCAGCTAATCA+AGG | 0.545300 | 1_4:+58384169 | None:intergenic |
| CACAACCAAGTGGACCAGAT+TGG | 0.548380 | 1_4:+58383280 | Msa0173160:CDS |
| TATGAAAACGCAATAATTGG+AGG | 0.553735 | 1_4:+58389112 | None:intergenic |
| GCTTGTATGCAACTTGCATG+TGG | 0.558794 | 1_4:-58383258 | Msa0173170:three_prime_UTR |
| TGGTTAAAATATGAACTGCC+TGG | 0.567031 | 1_4:+58383300 | Msa0173160:CDS |
| ATCTTTAGAAGAGACCACTT+TGG | 0.570156 | 1_4:+58384022 | None:intergenic |
| TGCTTGGTCTTCAGATAGCA+TGG | 0.570332 | 1_4:+58384106 | None:intergenic |
| TTGGGAAAATTCTAGAGTGT+AGG | 0.570862 | 1_4:-58384398 | Msa0173170:three_prime_UTR |
| CACATTAATAACATGTTGCT+AGG | 0.570999 | 1_4:+58383324 | Msa0173160:CDS |
| TAATTGGAGGTCGTATTGAT+GGG | 0.571726 | 1_4:+58389125 | None:intergenic |
| TCCATCCTTGATTAGCTGGA+TGG | 0.573541 | 1_4:-58384174 | Msa0173170:three_prime_UTR |
| TGCTGCAGGATCAGAGGACC+TGG | 0.574759 | 1_4:+58384760 | None:intergenic |
| CAATTTCCTCGAAACTAACA+CGG | 0.576374 | 1_4:-58389150 | Msa0173170:five_prime_UTR |
| TCTCACTTATCTCCTTTCCC+AGG | 0.576762 | 1_4:+58385014 | None:intergenic |
| GGAAAATTCTAGAGTGTAGG+TGG | 0.576870 | 1_4:-58384395 | Msa0173170:three_prime_UTR |
| GAACAAAGCGACTTCTTCGA+AGG | 0.577525 | 1_4:-58383784 | Msa0173170:three_prime_UTR |
| TGTGGTTCTCCATTTAGAAG+TGG | 0.580837 | 1_4:+58384941 | None:intergenic |
| AGTTCAACAAGTTTCTGTAA+GGG | 0.581346 | 1_4:-58384683 | Msa0173170:three_prime_UTR |
| TTCAGTGAAACAAATTTGGA+CGG | 0.583723 | 1_4:-58384821 | Msa0173170:CDS |
| GCCATCCAGCTAATCAAGGA+TGG | 0.589120 | 1_4:+58384173 | None:intergenic |
| TGATATTGCTGCAGGATCAG+AGG | 0.591438 | 1_4:+58384754 | None:intergenic |
| ATGAAAGCCTTGACTCCAAG+AGG | 0.593005 | 1_4:-58383205 | Msa0173170:three_prime_UTR |
| TTTAGAAGTGGAAATAAAGG+AGG | 0.594824 | 1_4:+58384953 | None:intergenic |
| TGTCACATGAATTTAAGGAC+AGG | 0.595514 | 1_4:-58383712 | Msa0173170:intron |
| TTTCATCATTGAATTTGCGA+AGG | 0.596558 | 1_4:-58384506 | Msa0173170:three_prime_UTR |
| ATTAATAACATGTTGCTAGG+AGG | 0.596689 | 1_4:+58383327 | Msa0173160:CDS |
| CAAATGGAGCTCAAACTCCA+AGG | 0.600713 | 1_4:+58383983 | None:intergenic |
| GGATTATGAACTCAATGTCA+TGG | 0.600830 | 1_4:-58384470 | Msa0173170:three_prime_UTR |
| AGTAAGGTTCTGAACACCCC+TGG | 0.607738 | 1_4:-58388307 | Msa0173170:CDS |
| GTGCAGATGAAACTGCCACC+AGG | 0.614656 | 1_4:-58384799 | Msa0173170:CDS |
| GGTCTGTTTCTCAGCACCAG+GGG | 0.615244 | 1_4:+58388291 | None:intergenic |
| AAAGGCATACAAGGTGTCTG+AGG | 0.617913 | 1_4:+58384568 | None:intergenic |
| GGTGGCGGGATCAGAAGACC+TGG | 0.619059 | 1_4:+58384781 | None:intergenic |
| GCTCCACATCAATGTGAATG+TGG | 0.623832 | 1_4:-58383850 | Msa0173170:three_prime_UTR |
| CTCCAAGAGGAAGACATCAT+CGG | 0.624470 | 1_4:-58383192 | Msa0173170:three_prime_UTR |
| AAAAGAACCTATAGAGTGTG+GGG | 0.626012 | 1_4:-58389280 | Msa0173170:five_prime_UTR |
| GATCCTGCAGCAATATCAGA+AGG | 0.627968 | 1_4:-58384749 | Msa0173170:CDS |
| GAATTCACGGTAACAAGCCA+CGG | 0.628081 | 1_4:-58383918 | Msa0173170:three_prime_UTR |
| CTTCAGATAGCATGGCAAAG+AGG | 0.633240 | 1_4:+58384114 | None:intergenic |
| TATCTGAAGACCAAGCATAG+AGG | 0.633798 | 1_4:-58384100 | Msa0173170:three_prime_UTR |
| TGCATACAAGCACAACCAAG+TGG | 0.636072 | 1_4:+58383270 | Msa0173160:CDS |
| CTTGTATGCAACTTGCATGT+GGG | 0.636807 | 1_4:-58383257 | Msa0173170:three_prime_UTR |
| AATGTCATGGTTCATGCTAG+GGG | 0.637434 | 1_4:-58384457 | Msa0173170:three_prime_UTR |
| CGAAATCGAATAGTCTTCGA+CGG | 0.642676 | 1_4:-58389023 | Msa0173170:five_prime_UTR |
| TGCGAAGGCTAGGAGATGTG+AGG | 0.646138 | 1_4:-58384491 | Msa0173170:three_prime_UTR |
| CAAACAGACCAATATTATTG+GGG | 0.646193 | 1_4:-58384063 | Msa0173170:three_prime_UTR |
| AACATGTTATTAATGTGACC+AGG | 0.650975 | 1_4:-58383318 | Msa0173170:three_prime_UTR |
| TCACGGTAACAAGCCACGGT+GGG | 0.655246 | 1_4:-58383914 | Msa0173170:three_prime_UTR |
| TGCAGGATCAGAGGACCTGG+TGG | 0.661839 | 1_4:+58384763 | None:intergenic |
| AGAACCACAACCCGATAAGG+AGG | 0.663173 | 1_4:-58384927 | Msa0173170:CDS |
| ACCAAACACGCACTTAGAGT+AGG | 0.665339 | 1_4:+58383948 | None:intergenic |
| CAATTTCAAAGACTTGACCA+GGG | 0.668086 | 1_4:-58384706 | Msa0173170:exon |
| TGTGGAGCTGAACACACAGT+TGG | 0.671228 | 1_4:+58383865 | None:intergenic |
| GGCGGGATCAGAAGACCTGG+TGG | 0.679171 | 1_4:+58384784 | None:intergenic |
| ACTGTGTGCTTGTATTGGTG+TGG | 0.682297 | 1_4:-58383452 | Msa0173170:three_prime_UTR |
| TTCACGGTAACAAGCCACGG+TGG | 0.685464 | 1_4:-58383915 | Msa0173170:three_prime_UTR |
| TTAGAGTCGCTGATGAACGA+CGG | 0.717153 | 1_4:-58388949 | Msa0173170:CDS |
| GCATAGCTTCTGTCCCACCG+TGG | 0.760738 | 1_4:+58383901 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGATTTTTGTATATTATAAT+AGG | - | chr1_4:58383495-58383514 | Msa0173170:three_prime_UTR | 10.0% |
| !!! | ATAAATAATTTACACATTTT+GGG | + | chr1_4:58384670-58384689 | None:intergenic | 10.0% |
| !!! | ATTTTATACATGTATTATTA+GGG | + | chr1_4:58385129-58385148 | None:intergenic | 10.0% |
| !! | AAAATTCAAAATAAAAGAAA+GGG | + | chr1_4:58386327-58386346 | None:intergenic | 10.0% |
| !! | AAAAATTCAAAATAAAAGAA+AGG | + | chr1_4:58386328-58386347 | None:intergenic | 10.0% |
| !! | GAAAAATAAAATTGGAAAAA+AGG | + | chr1_4:58383458-58383477 | Msa0173160:CDS | 15.0% |
| !! | TAGAACTAGAAAAATAAAAT+TGG | + | chr1_4:58383466-58383485 | Msa0173160:CDS | 15.0% |
| !!! | ATTTTGAATTTTGGTATAAT+TGG | - | chr1_4:58383884-58383903 | Msa0173170:three_prime_UTR | 15.0% |
| !!! | GATTTGCTTATATTTATTAT+TGG | - | chr1_4:58384098-58384117 | Msa0173170:three_prime_UTR | 15.0% |
| !!! | GATAAATAATTTACACATTT+TGG | + | chr1_4:58384671-58384690 | None:intergenic | 15.0% |
| !!! | ACCAAATACAAATATTATTT+TGG | + | chr1_4:58385092-58385111 | None:intergenic | 15.0% |
| !!! | GATTTTATACATGTATTATT+AGG | + | chr1_4:58385130-58385149 | None:intergenic | 15.0% |
| !! | AAAATAGTAAAAGTTAGATT+GGG | + | chr1_4:58386044-58386063 | None:intergenic | 15.0% |
| !! | TAAAATAGTAAAAGTTAGAT+TGG | + | chr1_4:58386045-58386064 | None:intergenic | 15.0% |
| !! | AAATTCAAAATAAAAGAAAG+GGG | + | chr1_4:58386326-58386345 | None:intergenic | 15.0% |
| !!! | AATTAAATGTCAATTTTTGT+AGG | - | chr1_4:58386589-58386608 | Msa0173170:intron | 15.0% |
| !!! | ATTAAATGTCAATTTTTGTA+GGG | - | chr1_4:58386590-58386609 | Msa0173170:intron | 15.0% |
| !! | CGAATGAATTATAATAAAAT+AGG | - | chr1_4:58386867-58386886 | Msa0173170:intron | 15.0% |
| !!! | TTTTGAACATAATTATTGTT+TGG | - | chr1_4:58387901-58387920 | Msa0173170:intron | 15.0% |
| !! | TTTGAACATAATTATTGTTT+GGG | - | chr1_4:58387902-58387921 | Msa0173170:intron | 15.0% |
| !! | ATTAACCATTATTTACATTT+GGG | + | chr1_4:58388707-58388726 | None:intergenic | 15.0% |
| !! | AATTAACCATTATTTACATT+TGG | + | chr1_4:58388708-58388727 | None:intergenic | 15.0% |
| !! | AATAAAATTGGAAAAAAGGA+GGG | + | chr1_4:58383454-58383473 | Msa0173160:CDS | 20.0% |
| !! | AAATAAAATTGGAAAAAAGG+AGG | + | chr1_4:58383455-58383474 | Msa0173160:CDS | 20.0% |
| !! | TTGTAGATTCAAAAAATTGT+TGG | - | chr1_4:58383584-58383603 | Msa0173170:intron | 20.0% |
| !! | ACAATAACACTATAATTGTA+GGG | - | chr1_4:58383713-58383732 | Msa0173170:three_prime_UTR | 20.0% |
| !!! | GACTAAAAGTATATTTAAGA+GGG | - | chr1_4:58383735-58383754 | Msa0173170:three_prime_UTR | 20.0% |
| !!! | ACTAAAAGTATATTTAAGAG+GGG | - | chr1_4:58383736-58383755 | Msa0173170:three_prime_UTR | 20.0% |
| !! | ATACCAAAATTCAAAATCAA+TGG | + | chr1_4:58383881-58383900 | None:intergenic | 20.0% |
| !!! | TTCACACTATACTTTTATAT+GGG | + | chr1_4:58384598-58384617 | None:intergenic | 20.0% |
| !! | AAATAATTATAACCACTTGA+TGG | + | chr1_4:58384707-58384726 | None:intergenic | 20.0% |
| !! | AAAAAATTTGAATGAAAGAG+AGG | - | chr1_4:58384732-58384751 | Msa0173170:CDS | 20.0% |
| !! | AAAAATTTGAATGAAAGAGA+GGG | - | chr1_4:58384733-58384752 | Msa0173170:CDS | 20.0% |
| !! | AAAGACAAACTAAAATCAAT+AGG | + | chr1_4:58384967-58384986 | None:intergenic | 20.0% |
| !! | GCCAAAATAATATTTGTATT+TGG | - | chr1_4:58385088-58385107 | Msa0173170:intron | 20.0% |
| !!! | TTTTTGCAGACTTTATAAAA+GGG | + | chr1_4:58385223-58385242 | None:intergenic | 20.0% |
| !!! | TTTTTTGCAGACTTTATAAA+AGG | + | chr1_4:58385224-58385243 | None:intergenic | 20.0% |
| !!! | TTTTTTGCATTTTCATTGTA+CGG | + | chr1_4:58385395-58385414 | None:intergenic | 20.0% |
| !! | GCTGTATAAAAGTTAAAATT+GGG | + | chr1_4:58385970-58385989 | None:intergenic | 20.0% |
| !! | AGCTGTATAAAAGTTAAAAT+TGG | + | chr1_4:58385971-58385990 | None:intergenic | 20.0% |
| !! | TAAAACTATTTCATACAAAG+AGG | + | chr1_4:58386378-58386397 | None:intergenic | 20.0% |
| !!! | CCAAGATTTTCTTAAAAATT+TGG | + | chr1_4:58386657-58386676 | None:intergenic | 20.0% |
| !!! | CCAAATTTTTAAGAAAATCT+TGG | - | chr1_4:58386654-58386673 | Msa0173170:intron | 20.0% |
| !! | TCTTTATTATAGACTGAAAT+AGG | - | chr1_4:58386691-58386710 | Msa0173170:intron | 20.0% |
| !!! | TCAAATTATTTAGTTTTTGC+TGG | - | chr1_4:58387173-58387192 | Msa0173170:intron | 20.0% |
| !!! | GATTTAATTTTAGACAACAA+TGG | - | chr1_4:58387281-58387300 | Msa0173170:intron | 20.0% |
| !! | AAATATATTGTTGAACTTGT+AGG | - | chr1_4:58387675-58387694 | Msa0173170:intron | 20.0% |
| !!! | CAAACTCTTATTTATATGAA+AGG | + | chr1_4:58387771-58387790 | None:intergenic | 20.0% |
| !! | CAAATTCAATGATGAAAAAT+TGG | + | chr1_4:58387809-58387828 | None:intergenic | 20.0% |
| !! | TGGAAAAAAAAGACTTTATA+TGG | - | chr1_4:58388790-58388809 | Msa0173170:intron | 20.0% |
| !! | TTATGGAATACTATAATCAA+TGG | - | chr1_4:58389243-58389262 | Msa0173170:five_prime_UTR | 20.0% |
| !!! | AAACCCTAATTTTTTGATGA+GGG | + | chr1_4:58383139-58383158 | Msa0173160:intron | 25.0% |
| !!! | AAAACCCTAATTTTTTGATG+AGG | + | chr1_4:58383140-58383159 | Msa0173160:intron | 25.0% |
| ! | AAAAAACGTTATAATTGCAC+AGG | + | chr1_4:58383539-58383558 | Msa0173160:three_prime_UTR | 25.0% |
| !!! | AAATATGCTTTTTTGACATG+TGG | + | chr1_4:58383649-58383668 | None:intergenic | 25.0% |
| !! | TTTTGTTCAAATTCACAGAT+TGG | + | chr1_4:58383682-58383701 | None:intergenic | 25.0% |
| ! | CACAATAACACTATAATTGT+AGG | - | chr1_4:58383712-58383731 | Msa0173170:intron | 25.0% |
| !! | GGACTAAAAGTATATTTAAG+AGG | - | chr1_4:58383734-58383753 | Msa0173170:three_prime_UTR | 25.0% |
| !!! | CTTCCATTGATTTTGAATTT+TGG | - | chr1_4:58383875-58383894 | Msa0173170:three_prime_UTR | 25.0% |
| !!! | AGACTTTTTTGTTTTAGTGA+AGG | + | chr1_4:58384545-58384564 | None:intergenic | 25.0% |
| ! | AAACAAAAAAGTCTCATACT+TGG | - | chr1_4:58384551-58384570 | Msa0173170:three_prime_UTR | 25.0% |
| ! | AACAAAAAAGTCTCATACTT+GGG | - | chr1_4:58384552-58384571 | Msa0173170:three_prime_UTR | 25.0% |
| !! | TCACACTATACTTTTATATG+GGG | + | chr1_4:58384597-58384616 | None:intergenic | 25.0% |
| !! | GTTCACACTATACTTTTATA+TGG | + | chr1_4:58384599-58384618 | None:intergenic | 25.0% |
| ! | ATGAAAATATTATTGATGGG+AGG | + | chr1_4:58385025-58385044 | None:intergenic | 25.0% |
| ! | GGGATGAAAATATTATTGAT+GGG | + | chr1_4:58385028-58385047 | None:intergenic | 25.0% |
| !! | ATTTTCAGCAAGATGATTAA+GGG | + | chr1_4:58385049-58385068 | None:intergenic | 25.0% |
| !! | AATATTTGTATTTGGTTCCT+TGG | - | chr1_4:58385096-58385115 | Msa0173170:intron | 25.0% |
| !! | AACATATTTTGCACATGAAT+TGG | - | chr1_4:58385268-58385287 | Msa0173170:intron | 25.0% |
| !! | ACATTACAAATGTTTTCGTT+GGG | + | chr1_4:58385306-58385325 | None:intergenic | 25.0% |
| ! | GAAAACATTTGTAATGTGAA+TGG | - | chr1_4:58385309-58385328 | Msa0173170:intron | 25.0% |
| ! | ATAAATATACACAACTGATG+CGG | - | chr1_4:58385346-58385365 | Msa0173170:intron | 25.0% |
| !! | CACATTACAAATGTTTTCAT+TGG | + | chr1_4:58385479-58385498 | None:intergenic | 25.0% |
| !!! | ACTATTACTTTTCCGTTTTT+TGG | + | chr1_4:58385792-58385811 | None:intergenic | 25.0% |
| !! | CTTTAAGAAGTGTATATACA+AGG | + | chr1_4:58386271-58386290 | None:intergenic | 25.0% |
| ! | CTTGTATATACACTTCTTAA+AGG | - | chr1_4:58386269-58386288 | Msa0173170:intron | 25.0% |
| ! | TTTCATACAAAGAGGTTTAA+TGG | + | chr1_4:58386370-58386389 | None:intergenic | 25.0% |
| ! | GACTGGAATATAGTTTAATT+AGG | + | chr1_4:58386450-58386469 | None:intergenic | 25.0% |
| !! | TCTTGGTAATTATACAGATA+CGG | - | chr1_4:58386807-58386826 | Msa0173170:intron | 25.0% |
| !! | TAGACTTACTACATGTATTT+TGG | - | chr1_4:58386914-58386933 | Msa0173170:intron | 25.0% |
| !! | AGACTTACTACATGTATTTT+GGG | - | chr1_4:58386915-58386934 | Msa0173170:intron | 25.0% |
| !!! | CTTGTTTTTTTGTAATCACA+TGG | + | chr1_4:58386997-58387016 | None:intergenic | 25.0% |
| ! | AGGCATTAACAAAAAAAAAG+TGG | + | chr1_4:58387053-58387072 | None:intergenic | 25.0% |
| !!! | CAAGTCTTTGAAATTGATAA+AGG | + | chr1_4:58387608-58387627 | None:intergenic | 25.0% |
| !! | ATTTATATGAAAGGCATACA+AGG | + | chr1_4:58387762-58387781 | None:intergenic | 25.0% |
| ! | AACAAACAGACCAATATTAT+TGG | - | chr1_4:58388253-58388272 | Msa0173170:CDS | 25.0% |
| ! | ACAAACAGACCAATATTATT+GGG | - | chr1_4:58388254-58388273 | Msa0173170:CDS | 25.0% |
| ! | TTTGGTAAATCTTGAATTCA+CGG | - | chr1_4:58388387-58388406 | Msa0173170:intron | 25.0% |
| ! | AAATGACAAATTCTGTGTTA+AGG | - | chr1_4:58388506-58388525 | Msa0173170:intron | 25.0% |
| ! | AATGACAAATTCTGTGTTAA+GGG | - | chr1_4:58388507-58388526 | Msa0173170:intron | 25.0% |
| ! | ATGTATGTCACATGAATTTA+AGG | - | chr1_4:58388601-58388620 | Msa0173170:intron | 25.0% |
| ! | AAAAAAGACTTTATATGGCA+CGG | - | chr1_4:58388795-58388814 | Msa0173170:intron | 25.0% |
| !! | TTGTGTTGAATTCATTTTCT+GGG | - | chr1_4:58388959-58388978 | Msa0173170:CDS | 25.0% |
| !!! | AGTTCATATTTTAACCAATC+TGG | - | chr1_4:58389024-58389043 | Msa0173170:five_prime_UTR | 25.0% |
| CTTCCCTCATCAAAAAATTA+GGG | - | chr1_4:58383133-58383152 | Msa0173170:three_prime_UTR | 30.0% | |
| TATGAAAACGCAATAATTGG+AGG | + | chr1_4:58383209-58383228 | Msa0173160:CDS | 30.0% | |
| GGATATGAAAACGCAATAAT+TGG | + | chr1_4:58383212-58383231 | Msa0173160:CDS | 30.0% | |
| !! | TGGATATTGATTTGTATCGA+TGG | + | chr1_4:58383250-58383269 | Msa0173160:CDS | 30.0% |
| AGGCAAAATATGGAAGAATT+TGG | + | chr1_4:58383270-58383289 | Msa0173160:CDS | 30.0% | |
| ! | ACATGTGTCGTGATTTTATT+GGG | + | chr1_4:58383626-58383645 | None:intergenic | 30.0% |
| AAGTATATTTAAGAGGGGTT+TGG | - | chr1_4:58383741-58383760 | Msa0173170:three_prime_UTR | 30.0% | |
| !! | TATTGTGATAAGTTTTGTGC+TGG | - | chr1_4:58383935-58383954 | Msa0173170:three_prime_UTR | 30.0% |
| !! | CAAGAGTACTACTATAAAGA+TGG | - | chr1_4:58383980-58383999 | Msa0173170:three_prime_UTR | 30.0% |
| !! | TGTTTAGTTTGGCATTGTAT+AGG | - | chr1_4:58384216-58384235 | Msa0173170:three_prime_UTR | 30.0% |
| TTTCATACGATGTGATTGAA+TGG | + | chr1_4:58384336-58384355 | None:intergenic | 30.0% | |
| AATCACAACTTTCTAACTTG+AGG | - | chr1_4:58384389-58384408 | Msa0173170:three_prime_UTR | 30.0% | |
| CATAGAGAACATTTCTACTA+CGG | + | chr1_4:58384799-58384818 | None:intergenic | 30.0% | |
| GATCAAACATGGAAAATTAG+TGG | + | chr1_4:58384823-58384842 | None:intergenic | 30.0% | |
| TAGATGATTTCTTGGTTGAT+CGG | - | chr1_4:58384865-58384884 | Msa0173170:CDS | 30.0% | |
| GGGGATGAAAATATTATTGA+TGG | + | chr1_4:58385029-58385048 | None:intergenic | 30.0% | |
| ! | TTTTCAGCAAGATGATTAAG+GGG | + | chr1_4:58385048-58385067 | None:intergenic | 30.0% |
| ! | GATTTTCAGCAAGATGATTA+AGG | + | chr1_4:58385050-58385069 | None:intergenic | 30.0% |
| ATAGGCGCTCAATATTATTA+GGG | + | chr1_4:58385199-58385218 | None:intergenic | 30.0% | |
| TTCATGTGCAAAATATGTTG+CGG | + | chr1_4:58385267-58385286 | None:intergenic | 30.0% | |
| ! | CATTACAAATGTTTTCGTTG+GGG | + | chr1_4:58385305-58385324 | None:intergenic | 30.0% |
| ! | CACATTACAAATGTTTTCGT+TGG | + | chr1_4:58385307-58385326 | None:intergenic | 30.0% |
| ! | TACATGTTTTGCACATGAAT+TGG | - | chr1_4:58385440-58385459 | Msa0173170:intron | 30.0% |
| TAGTGAAATTTATGCAAGAG+TGG | + | chr1_4:58385613-58385632 | None:intergenic | 30.0% | |
| ! | TTTTCAACCCAATAATCTGA+GGG | + | chr1_4:58385718-58385737 | None:intergenic | 30.0% |
| ! | GTATTGGATTGGATACATAT+CGG | + | chr1_4:58385817-58385836 | None:intergenic | 30.0% |
| ! | TCCAATAAGTATGCTTGTTT+TGG | - | chr1_4:58385858-58385877 | Msa0173170:intron | 30.0% |
| ACCAAAACAAGCATACTTAT+TGG | + | chr1_4:58385862-58385881 | None:intergenic | 30.0% | |
| !! | GCTTTATTTAAGACGTATCA+GGG | + | chr1_4:58385889-58385908 | None:intergenic | 30.0% |
| !! | AGCTTTATTTAAGACGTATC+AGG | + | chr1_4:58385890-58385909 | None:intergenic | 30.0% |
| ! | TTCACTCTATTTTCCATTTG+CGG | - | chr1_4:58386192-58386211 | Msa0173170:intron | 30.0% |
| !! | CAACTTTTCAAGCATTCTTT+AGG | + | chr1_4:58386299-58386318 | None:intergenic | 30.0% |
| CAAATCAAATCCTGTGAAAT+AGG | - | chr1_4:58386418-58386437 | Msa0173170:intron | 30.0% | |
| TCATGATGATAGCAATAACT+TGG | + | chr1_4:58386522-58386541 | None:intergenic | 30.0% | |
| CCACATGCAAAACTAATATA+AGG | + | chr1_4:58386737-58386756 | None:intergenic | 30.0% | |
| !!! | CCTTATATTAGTTTTGCATG+TGG | - | chr1_4:58386734-58386753 | Msa0173170:intron | 30.0% |
| CTTATACTACTATACTAGAC+AGG | - | chr1_4:58386945-58386964 | Msa0173170:intron | 30.0% | |
| TGTGAAGCTAAAATCTAATC+AGG | + | chr1_4:58387149-58387168 | None:intergenic | 30.0% | |
| !!! | TTTAGTTTTTGCTGGAATTC+TGG | - | chr1_4:58387181-58387200 | Msa0173170:intron | 30.0% |
| !! | AGAAAGCATCAAAATCAGTT+TGG | - | chr1_4:58387258-58387277 | Msa0173170:intron | 30.0% |
| !! | GAAAGCATCAAAATCAGTTT+GGG | - | chr1_4:58387259-58387278 | Msa0173170:intron | 30.0% |
| TTTAGAAGTGGAAATAAAGG+AGG | + | chr1_4:58387368-58387387 | None:intergenic | 30.0% | |
| CCATTTAGAAGTGGAAATAA+AGG | + | chr1_4:58387371-58387390 | None:intergenic | 30.0% | |
| ! | CCTTTATTTCCACTTCTAAA+TGG | - | chr1_4:58387368-58387387 | Msa0173170:intron | 30.0% |
| AGCAGAAAAGAAAAAGGTAA+AGG | - | chr1_4:58387419-58387438 | Msa0173170:intron | 30.0% | |
| !!! | CTGAAGCTTCTTTTTTTTGA+TGG | + | chr1_4:58387482-58387501 | None:intergenic | 30.0% |
| AAGCTTCAGTGAAACAAATT+TGG | - | chr1_4:58387493-58387512 | Msa0173170:intron | 30.0% | |
| TTCAGTGAAACAAATTTGGA+CGG | - | chr1_4:58387497-58387516 | Msa0173170:intron | 30.0% | |
| AGTTCAACAAGTTTCTGTAA+GGG | - | chr1_4:58387635-58387654 | Msa0173170:intron | 30.0% | |
| TTTCATCATTGAATTTGCGA+AGG | - | chr1_4:58387812-58387831 | Msa0173170:intron | 30.0% | |
| ! | TTAAAGAGACGTCAGTTTTA+AGG | + | chr1_4:58388017-58388036 | None:intergenic | 30.0% |
| ! | ATTGCATTGATGACAATCTT+TGG | - | chr1_4:58388036-58388055 | Msa0173170:intron | 30.0% |
| !!! | AGAGGTTTTAGAATAAGTTG+TGG | + | chr1_4:58388189-58388208 | None:intergenic | 30.0% |
| CAAACAGACCAATATTATTG+GGG | - | chr1_4:58388255-58388274 | Msa0173170:CDS | 30.0% | |
| CAAAAATAAATGCTCCAAAG+TGG | - | chr1_4:58388282-58388301 | Msa0173170:CDS | 30.0% | |
| TAGGTGAAGTTGAATTCAAA+TGG | + | chr1_4:58388354-58388373 | None:intergenic | 30.0% | |
| ! | ATCTTGATGATAGTGATATG+TGG | + | chr1_4:58388666-58388685 | None:intergenic | 30.0% |
| CATATCACTATCATCAAGAT+AGG | - | chr1_4:58388666-58388685 | Msa0173170:intron | 30.0% | |
| TTACATTTGGGCTGTTAAAA+TGG | + | chr1_4:58388695-58388714 | None:intergenic | 30.0% | |
| AACAGCCCAAATGTAAATAA+TGG | - | chr1_4:58388699-58388718 | Msa0173170:intron | 30.0% | |
| ACAGCTTCTCTTAATTTATG+TGG | - | chr1_4:58388770-58388789 | Msa0173170:intron | 30.0% | |
| TCAATTGATTGAGCAACATT+TGG | - | chr1_4:58388904-58388923 | Msa0173170:CDS | 30.0% | |
| CAATTGATTGAGCAACATTT+GGG | - | chr1_4:58388905-58388924 | Msa0173170:CDS | 30.0% | |
| ! | GTTGTGTTGAATTCATTTTC+TGG | - | chr1_4:58388958-58388977 | Msa0173170:CDS | 30.0% |
| !!! | TGAATTCATTTTCTGGGATA+TGG | - | chr1_4:58388965-58388984 | Msa0173170:CDS | 30.0% |
| ATTAATAACATGTTGCTAGG+AGG | + | chr1_4:58388994-58389013 | None:intergenic | 30.0% | |
| CACATTAATAACATGTTGCT+AGG | + | chr1_4:58388997-58389016 | None:intergenic | 30.0% | |
| AACATGTTATTAATGTGACC+AGG | - | chr1_4:58389000-58389019 | Msa0173170:exon | 30.0% | |
| TTATGACACTTCACTTTCAA+TGG | + | chr1_4:58389094-58389113 | None:intergenic | 30.0% | |
| TGAGCACACATGTATTATTA+TGG | - | chr1_4:58389226-58389245 | Msa0173170:five_prime_UTR | 30.0% | |
| ! | AAATTTTTGCTACCTGAAGT+TGG | - | chr1_4:58389266-58389285 | Msa0173170:five_prime_UTR | 30.0% |
| ! | AATTTTTGCTACCTGAAGTT+GGG | - | chr1_4:58389267-58389286 | Msa0173170:five_prime_UTR | 30.0% |
| AATTATAACAACCCAACTTC+AGG | + | chr1_4:58389281-58389300 | None:intergenic | 30.0% | |
| AGATCTATCAAACACACATC+TGG | + | chr1_4:58383080-58383099 | Msa0173160:intron | 35.0% | |
| !!! | AATTTTTTGATGAGGGAAGG+AGG | + | chr1_4:58383132-58383151 | Msa0173160:intron | 35.0% |
| !!! | CCTAATTTTTTGATGAGGGA+AGG | + | chr1_4:58383135-58383154 | Msa0173160:intron | 35.0% |
| CCTTCCCTCATCAAAAAATT+AGG | - | chr1_4:58383132-58383151 | Msa0173170:three_prime_UTR | 35.0% | |
| CAATTTCCTCGAAACTAACA+CGG | - | chr1_4:58383168-58383187 | Msa0173170:three_prime_UTR | 35.0% | |
| ! | TAATTGGAGGTCGTATTGAT+GGG | + | chr1_4:58383196-58383215 | Msa0173160:CDS | 35.0% |
| ATAATTGGAGGTCGTATTGA+TGG | + | chr1_4:58383197-58383216 | Msa0173160:CDS | 35.0% | |
| ! | TGCGTTTTCATATCCAACAT+TGG | - | chr1_4:58383217-58383236 | Msa0173170:three_prime_UTR | 35.0% |
| ATTGCTTATGGCTTCTTCTT+CGG | - | chr1_4:58383326-58383345 | Msa0173170:three_prime_UTR | 35.0% | |
| ! | GACATGTGTCGTGATTTTAT+TGG | + | chr1_4:58383627-58383646 | None:intergenic | 35.0% |
| !!! | TGTGCTGGTTTGTTTTTTGT+AGG | - | chr1_4:58383950-58383969 | Msa0173170:three_prime_UTR | 35.0% |
| CAAATGTTGATCCCTTTGTT+GGG | - | chr1_4:58384123-58384142 | Msa0173170:three_prime_UTR | 35.0% | |
| ATTACAACTGTTCGTAGCAT+GGG | + | chr1_4:58384495-58384514 | None:intergenic | 35.0% | |
| AATTACAACTGTTCGTAGCA+TGG | + | chr1_4:58384496-58384515 | None:intergenic | 35.0% | |
| AAAAGTCTCATACTTGGGTT+TGG | - | chr1_4:58384557-58384576 | Msa0173170:three_prime_UTR | 35.0% | |
| CCAAGAAATCATCTAGTTAG+AGG | + | chr1_4:58384860-58384879 | None:intergenic | 35.0% | |
| CCTCTAACTAGATGATTTCT+TGG | - | chr1_4:58384857-58384876 | Msa0173170:CDS | 35.0% | |
| ! | AAAATCCGAAGAGTACATGT+GGG | - | chr1_4:58385064-58385083 | Msa0173170:CDS | 35.0% |
| ! | TTGTATTTGGTTCCTTGGAT+TGG | - | chr1_4:58385101-58385120 | Msa0173170:intron | 35.0% |
| ! | ATTATTAGGGTACCAATCCA+AGG | + | chr1_4:58385116-58385135 | None:intergenic | 35.0% |
| AAGGAACCGTACAATACAAA+AGG | + | chr1_4:58385167-58385186 | None:intergenic | 35.0% | |
| ! | TTTTGTATTGTACGGTTCCT+TGG | - | chr1_4:58385166-58385185 | Msa0173170:intron | 35.0% |
| CATAGGCGCTCAATATTATT+AGG | + | chr1_4:58385200-58385219 | None:intergenic | 35.0% | |
| ! | CAGACTTTATAAAAGGGCAT+AGG | + | chr1_4:58385217-58385236 | None:intergenic | 35.0% |
| TCATGTGCAAAATATGTTGC+GGG | + | chr1_4:58385266-58385285 | None:intergenic | 35.0% | |
| ! | AAATGTTTTCATTGGCACAG+TGG | + | chr1_4:58385471-58385490 | None:intergenic | 35.0% |
| TCTGATTTCCAAATAGATGC+AGG | - | chr1_4:58385665-58385684 | Msa0173170:intron | 35.0% | |
| ! | CTTTTCAACCCAATAATCTG+AGG | + | chr1_4:58385719-58385738 | None:intergenic | 35.0% |
| ATTGACACGTGTATCAGTAT+TGG | + | chr1_4:58385833-58385852 | None:intergenic | 35.0% | |
| CAATTTAGCAACCAAAGACA+TGG | - | chr1_4:58385916-58385935 | Msa0173170:intron | 35.0% | |
| AAAATTGGGTGTGTCGTATT+CGG | + | chr1_4:58385956-58385975 | None:intergenic | 35.0% | |
| TAGTTTAGCAACCAAAGACA+TGG | - | chr1_4:58385997-58386016 | Msa0173170:intron | 35.0% | |
| AAGTTGAGAGGGTAAAAGTA+AGG | + | chr1_4:58386074-58386093 | None:intergenic | 35.0% | |
| CTCTTTCTGTTGACATATCT+AGG | - | chr1_4:58386229-58386248 | Msa0173170:intron | 35.0% | |
| TAGGATTTAGCCTATTTCAC+AGG | + | chr1_4:58386431-58386450 | None:intergenic | 35.0% | |
| TGATGATAGCAATAACTTGG+TGG | + | chr1_4:58386519-58386538 | None:intergenic | 35.0% | |
| CATAATTCCATGCACAAACA+CGG | - | chr1_4:58386558-58386577 | Msa0173170:intron | 35.0% | |
| ATAATTCCATGCACAAACAC+GGG | - | chr1_4:58386559-58386578 | Msa0173170:intron | 35.0% | |
| !! | ATGTCACTTTCTTTGATCGA+GGG | - | chr1_4:58386622-58386641 | Msa0173170:intron | 35.0% |
| GCATTTAACAGATCCAAACA+AGG | + | chr1_4:58386772-58386791 | None:intergenic | 35.0% | |
| CTGTTAAATGCCCTATAAAC+AGG | - | chr1_4:58386781-58386800 | Msa0173170:intron | 35.0% | |
| !!! | GTAGTGCGTCTTAGTTTTTT+GGG | - | chr1_4:58386829-58386848 | Msa0173170:intron | 35.0% |
| ACAGGTCTGAATTGTTAGTT+TGG | - | chr1_4:58386963-58386982 | Msa0173170:intron | 35.0% | |
| TTTGTAATCACATGGCCAAT+GGG | + | chr1_4:58386989-58387008 | None:intergenic | 35.0% | |
| ! | TTTTGTAATCACATGGCCAA+TGG | + | chr1_4:58386990-58387009 | None:intergenic | 35.0% |
| TTCGTACTAGATGCTTTATG+TGG | - | chr1_4:58387085-58387104 | Msa0173170:intron | 35.0% | |
| TCGTACTAGATGCTTTATGT+GGG | - | chr1_4:58387086-58387105 | Msa0173170:intron | 35.0% | |
| ! | AATTTTAGACAACAATGGCC+TGG | - | chr1_4:58387286-58387305 | Msa0173170:intron | 35.0% |
| ! | ATTTTAGACAACAATGGCCT+GGG | - | chr1_4:58387287-58387306 | Msa0173170:intron | 35.0% |
| ! | ACCTTTTTCTTTTCTGCTGT+CGG | + | chr1_4:58387417-58387436 | None:intergenic | 35.0% |
| TCAATTTCAAAGACTTGACC+AGG | - | chr1_4:58387611-58387630 | Msa0173170:intron | 35.0% | |
| CAATTTCAAAGACTTGACCA+GGG | - | chr1_4:58387612-58387631 | Msa0173170:intron | 35.0% | |
| GAGTTCAACAAGTTTCTGTA+AGG | - | chr1_4:58387634-58387653 | Msa0173170:intron | 35.0% | |
| GGATTATGAACTCAATGTCA+TGG | - | chr1_4:58387848-58387867 | Msa0173170:intron | 35.0% | |
| !! | TTGGGAAAATTCTAGAGTGT+AGG | - | chr1_4:58387920-58387939 | Msa0173170:intron | 35.0% |
| !! | ACAATCTTTGGTTTGCTTCA+TGG | - | chr1_4:58388048-58388067 | Msa0173170:intron | 35.0% |
| CTTCATGGTAAATATGCTTC+CGG | - | chr1_4:58388063-58388082 | Msa0173170:intron | 35.0% | |
| TTCATGGTAAATATGCTTCC+GGG | - | chr1_4:58388064-58388083 | Msa0173170:intron | 35.0% | |
| ! | TGCAGATTTTTCTATTCACC+CGG | + | chr1_4:58388085-58388104 | None:intergenic | 35.0% |
| AAAATCCATCCTTGATTAGC+TGG | - | chr1_4:58388140-58388159 | Msa0173170:intron | 35.0% | |
| !!! | GGTTTTAGAATAAGTTGTGG+TGG | + | chr1_4:58388186-58388205 | None:intergenic | 35.0% |
| TTTGCTCTCCCCAATAATAT+TGG | + | chr1_4:58388266-58388285 | None:intergenic | 35.0% | |
| ! | ATCTTTAGAAGAGACCACTT+TGG | + | chr1_4:58388299-58388318 | None:intergenic | 35.0% |
| GGTCTTGGATTGAATAAAAG+TGG | - | chr1_4:58388568-58388587 | Msa0173170:intron | 35.0% | |
| TGTCACATGAATTTAAGGAC+AGG | - | chr1_4:58388606-58388625 | Msa0173170:intron | 35.0% | |
| ATACAAGCACACAGTTTGAT+TGG | + | chr1_4:58388861-58388880 | None:intergenic | 35.0% | |
| ATCAAACTGTGTGCTTGTAT+TGG | - | chr1_4:58388861-58388880 | Msa0173170:intron | 35.0% | |
| TGGTTAAAATATGAACTGCC+TGG | + | chr1_4:58389021-58389040 | None:intergenic | 35.0% | |
| CGATGGATATAGACCAATGT+TGG | + | chr1_4:58383233-58383252 | Msa0173160:CDS | 40.0% | |
| TTTCGCGAGAAGGCAAAATA+TGG | + | chr1_4:58383280-58383299 | Msa0173160:CDS | 40.0% | |
| CGAAATCGAATAGTCTTCGA+CGG | - | chr1_4:58383295-58383314 | Msa0173170:three_prime_UTR | 40.0% | |
| AGCGACTCTAATACATCTTC+GGG | + | chr1_4:58383360-58383379 | Msa0173160:CDS | 40.0% | |
| CAGCGACTCTAATACATCTT+CGG | + | chr1_4:58383361-58383380 | Msa0173160:CDS | 40.0% | |
| AAGGAGGGTAGAAACTACAT+TGG | + | chr1_4:58383439-58383458 | Msa0173160:CDS | 40.0% | |
| TGTTTGTGCTAGTGCTTCTT+AGG | - | chr1_4:58383831-58383850 | Msa0173170:three_prime_UTR | 40.0% | |
| !!! | GCTGGTTTGTTTTTTGTAGG+AGG | - | chr1_4:58383953-58383972 | Msa0173170:three_prime_UTR | 40.0% |
| AAAGATGGCTGAACAGAGTA+AGG | - | chr1_4:58383995-58384014 | Msa0173170:three_prime_UTR | 40.0% | |
| ! | CGCATCAAATAGCTCTCTTT+TGG | + | chr1_4:58384051-58384070 | None:intergenic | 40.0% |
| CCAACAAAGGGATCAACATT+TGG | + | chr1_4:58384125-58384144 | None:intergenic | 40.0% | |
| CCAAATGTTGATCCCTTTGT+TGG | - | chr1_4:58384122-58384141 | Msa0173170:three_prime_UTR | 40.0% | |
| !!! | CTTTTCGAGTTCCCAACAAA+GGG | + | chr1_4:58384137-58384156 | None:intergenic | 40.0% |
| !!! | ACTTTTCGAGTTCCCAACAA+AGG | + | chr1_4:58384138-58384157 | None:intergenic | 40.0% |
| CTATTTCGCGCTGTTTAGTT+TGG | - | chr1_4:58384205-58384224 | Msa0173170:three_prime_UTR | 40.0% | |
| !! | CACATTTTGGGAAGCAAGTT+GGG | + | chr1_4:58384658-58384677 | None:intergenic | 40.0% |
| !! | ACACATTTTGGGAAGCAAGT+TGG | + | chr1_4:58384659-58384678 | None:intergenic | 40.0% |
| !! | TTATAACCACTTGATGGTGC+AGG | + | chr1_4:58384701-58384720 | None:intergenic | 40.0% |
| ATGTCATGCAGGATCAAACA+TGG | + | chr1_4:58384834-58384853 | None:intergenic | 40.0% | |
| GTTAGAGGAATATGTCATGC+AGG | + | chr1_4:58384845-58384864 | None:intergenic | 40.0% | |
| TTTCTTGGTTGATCGGATCA+AGG | - | chr1_4:58384872-58384891 | Msa0173170:CDS | 40.0% | |
| TTCTGCACTACGTCATAGAA+TGG | - | chr1_4:58384985-58385004 | Msa0173170:CDS | 40.0% | |
| ! | GAAAATCCGAAGAGTACATG+TGG | - | chr1_4:58385063-58385082 | Msa0173170:CDS | 40.0% |
| ! | AAATCCGAAGAGTACATGTG+GGG | - | chr1_4:58385065-58385084 | Msa0173170:CDS | 40.0% |
| ! | CCTACGCCTTTTGTATTGTA+CGG | - | chr1_4:58385158-58385177 | Msa0173170:intron | 40.0% |
| TATTGTACGGTTCCTTGGAT+CGG | - | chr1_4:58385171-58385190 | Msa0173170:intron | 40.0% | |
| !! | ATTATTAGGGTACCGATCCA+AGG | + | chr1_4:58385186-58385205 | None:intergenic | 40.0% |
| ! | AAATGTTTTCGTTGGGGTAG+GGG | + | chr1_4:58385299-58385318 | None:intergenic | 40.0% |
| ! | CAAATGTTTTCGTTGGGGTA+GGG | + | chr1_4:58385300-58385319 | None:intergenic | 40.0% |
| ! | ACAAATGTTTTCGTTGGGGT+AGG | + | chr1_4:58385301-58385320 | None:intergenic | 40.0% |
| ATTGTACGGCTGTTAATGTC+AGG | + | chr1_4:58385381-58385400 | None:intergenic | 40.0% | |
| TGCAAAACATGTAGCGAGAT+CGG | + | chr1_4:58385433-58385452 | None:intergenic | 40.0% | |
| !! | ATATCAAGTTGGACCTTACG+GGG | + | chr1_4:58385590-58385609 | None:intergenic | 40.0% |
| !! | GATATCAAGTTGGACCTTAC+GGG | + | chr1_4:58385591-58385610 | None:intergenic | 40.0% |
| !! | GGATATCAAGTTGGACCTTA+CGG | + | chr1_4:58385592-58385611 | None:intergenic | 40.0% |
| TGCAAGAGTGGATATCAAGT+TGG | + | chr1_4:58385601-58385620 | None:intergenic | 40.0% | |
| CAAATAGATGCAGGATAGCA+GGG | - | chr1_4:58385674-58385693 | Msa0173170:intron | 40.0% | |
| ! | AAAGCCAATATCTGAAACCC+TGG | - | chr1_4:58385762-58385781 | Msa0173170:intron | 40.0% |
| AGAACCAGGGTTTCAGATAT+TGG | + | chr1_4:58385769-58385788 | None:intergenic | 40.0% | |
| ! | AACCCTGGTTCTCCAAAAAA+CGG | - | chr1_4:58385777-58385796 | Msa0173170:intron | 40.0% |
| !!! | TTCCGTTTTTTGGAGAACCA+GGG | + | chr1_4:58385782-58385801 | None:intergenic | 40.0% |
| !!! | TTTCCGTTTTTTGGAGAACC+AGG | + | chr1_4:58385783-58385802 | None:intergenic | 40.0% |
| ! | CACGTGTATCAGTATTGGAT+TGG | + | chr1_4:58385828-58385847 | None:intergenic | 40.0% |
| AAATTGGGTGTGTCGTATTC+GGG | + | chr1_4:58385955-58385974 | None:intergenic | 40.0% | |
| TAGATTGGGTGTGTCGTATT+CGG | + | chr1_4:58386030-58386049 | None:intergenic | 40.0% | |
| GGAATGAGAAGAAGTTGAGA+GGG | + | chr1_4:58386085-58386104 | None:intergenic | 40.0% | |
| TGGAATGAGAAGAAGTTGAG+AGG | + | chr1_4:58386086-58386105 | None:intergenic | 40.0% | |
| TTCCAAAATGCAAATCCACC+TGG | - | chr1_4:58386101-58386120 | Msa0173170:intron | 40.0% | |
| TCTGTTGACATATCTAGGCT+TGG | - | chr1_4:58386234-58386253 | Msa0173170:intron | 40.0% | |
| TCCAGTCCTCCAAAGATATA+CGG | - | chr1_4:58386463-58386482 | Msa0173170:intron | 40.0% | |
| !! | AGTATCGACCCGTATATCTT+TGG | + | chr1_4:58386475-58386494 | None:intergenic | 40.0% |
| AGATATACGGGTCGATACTT+TGG | - | chr1_4:58386476-58386495 | Msa0173170:intron | 40.0% | |
| !! | CATGTCACTTTCTTTGATCG+AGG | - | chr1_4:58386621-58386640 | Msa0173170:intron | 40.0% |
| GAAAGTAGAAGCTCCTTGTT+TGG | - | chr1_4:58386756-58386775 | Msa0173170:intron | 40.0% | |
| ACCAAGACAGCCTGTTTATA+GGG | + | chr1_4:58386794-58386813 | None:intergenic | 40.0% | |
| TACCAAGACAGCCTGTTTAT+AGG | + | chr1_4:58386795-58386814 | None:intergenic | 40.0% | |
| !!! | GGTAGTGCGTCTTAGTTTTT+TGG | - | chr1_4:58386828-58386847 | Msa0173170:intron | 40.0% |
| TAAAATAGGCGTGCACAGAA+AGG | - | chr1_4:58386881-58386900 | Msa0173170:intron | 40.0% | |
| ! | GAATTGTTAGTTTGGCCCAT+TGG | - | chr1_4:58386971-58386990 | Msa0173170:intron | 40.0% |
| AGTACGAAATACAGCGGAAT+AGG | + | chr1_4:58387073-58387092 | None:intergenic | 40.0% | |
| GCATCTAGTACGAAATACAG+CGG | + | chr1_4:58387079-58387098 | None:intergenic | 40.0% | |
| TAGATGCTTTATGTGGGTCT+AGG | - | chr1_4:58387092-58387111 | Msa0173170:intron | 40.0% | |
| !! | TTGCTGGAATTCTGGTTTAC+TGG | - | chr1_4:58387189-58387208 | Msa0173170:intron | 40.0% |
| ACAGAAGCTCTGCATGAAAT+AGG | + | chr1_4:58387233-58387252 | None:intergenic | 40.0% | |
| TGTGGTTCTCCATTTAGAAG+TGG | + | chr1_4:58387380-58387399 | None:intergenic | 40.0% | |
| ! | TAATACACAGCTTTGATGGC+TGG | + | chr1_4:58387728-58387747 | None:intergenic | 40.0% |
| ! | GGCATAATACACAGCTTTGA+TGG | + | chr1_4:58387732-58387751 | None:intergenic | 40.0% |
| TCATTGAATTTGCGAAGGCT+AGG | - | chr1_4:58387817-58387836 | Msa0173170:intron | 40.0% | |
| TCAATGTCATGGTTCATGCT+AGG | - | chr1_4:58387859-58387878 | Msa0173170:intron | 40.0% | |
| CAATGTCATGGTTCATGCTA+GGG | - | chr1_4:58387860-58387879 | Msa0173170:intron | 40.0% | |
| AATGTCATGGTTCATGCTAG+GGG | - | chr1_4:58387861-58387880 | Msa0173170:intron | 40.0% | |
| !! | GGAAAATTCTAGAGTGTAGG+TGG | - | chr1_4:58387923-58387942 | Msa0173170:intron | 40.0% |
| TGCACATATGCTTGATGAGT+AGG | - | chr1_4:58388101-58388120 | Msa0173170:intron | 40.0% | |
| TATCTGAAGACCAAGCATAG+AGG | - | chr1_4:58388218-58388237 | Msa0173170:intron | 40.0% | |
| TGAAAGCTTACCTCTATGCT+TGG | + | chr1_4:58388231-58388250 | None:intergenic | 40.0% | |
| CTTCCACATTCACATTGATG+TGG | + | chr1_4:58388474-58388493 | None:intergenic | 40.0% | |
| AACATTTGGGCAAACTACAC+TGG | - | chr1_4:58388918-58388937 | Msa0173170:CDS | 40.0% | |
| TTTAACCAATCTGGTCCACT+TGG | - | chr1_4:58389033-58389052 | Msa0173170:five_prime_UTR | 40.0% | |
| CTTGTATGCAACTTGCATGT+GGG | - | chr1_4:58389061-58389080 | Msa0173170:five_prime_UTR | 40.0% | |
| ! | TTTTGATGAGGGAAGGAGGA+AGG | + | chr1_4:58383128-58383147 | Msa0173160:intron | 45.0% |
| GACTATTCGATTTCGCGAGA+AGG | + | chr1_4:58383290-58383309 | Msa0173160:CDS | 45.0% | |
| ACGGTGACTGCTATTGCTTA+TGG | - | chr1_4:58383314-58383333 | Msa0173170:three_prime_UTR | 45.0% | |
| TTAGAGTCGCTGATGAACGA+CGG | - | chr1_4:58383369-58383388 | Msa0173170:three_prime_UTR | 45.0% | |
| ACGGCACAATTGATGCTCTT+AGG | - | chr1_4:58383388-58383407 | Msa0173170:three_prime_UTR | 45.0% | |
| CTGTGACTTACTCAAGCTCT+TGG | + | chr1_4:58384079-58384098 | None:intergenic | 45.0% | |
| TTTCTGTGTCTGTTGCATGC+TGG | - | chr1_4:58384168-58384187 | Msa0173170:three_prime_UTR | 45.0% | |
| TTCTGTGTCTGTTGCATGCT+GGG | - | chr1_4:58384169-58384188 | Msa0173170:three_prime_UTR | 45.0% | |
| CAAATGTAGCACTGTCACTG+GGG | + | chr1_4:58384461-58384480 | None:intergenic | 45.0% | |
| GCAAATGTAGCACTGTCACT+GGG | + | chr1_4:58384462-58384481 | None:intergenic | 45.0% | |
| TGCAAATGTAGCACTGTCAC+TGG | + | chr1_4:58384463-58384482 | None:intergenic | 45.0% | |
| AAACGTGCGCAAAACATAGG+TGG | + | chr1_4:58384521-58384540 | None:intergenic | 45.0% | |
| GGAAAACGTGCGCAAAACAT+AGG | + | chr1_4:58384524-58384543 | None:intergenic | 45.0% | |
| !! | ACTTGATGGTGCAGGAAGAA+TGG | + | chr1_4:58384693-58384712 | None:intergenic | 45.0% |
| ATTCTTCCTGCACCATCAAG+TGG | - | chr1_4:58384692-58384711 | Msa0173170:three_prime_UTR | 45.0% | |
| ! | AATCCGAAGAGTACATGTGG+GGG | - | chr1_4:58385066-58385085 | Msa0173170:CDS | 45.0% |
| ! | CCGTACAATACAAAAGGCGT+AGG | + | chr1_4:58385161-58385180 | None:intergenic | 45.0% |
| ! | TAAGTTGGAATCTCCCCGTA+AGG | - | chr1_4:58385574-58385593 | Msa0173170:intron | 45.0% |
| CTAGCATTACTGCTAATGCG+TGG | - | chr1_4:58385630-58385649 | Msa0173170:intron | 45.0% | |
| CCTGCTATCCTGCATCTATT+TGG | + | chr1_4:58385676-58385695 | None:intergenic | 45.0% | |
| CCAAATAGATGCAGGATAGC+AGG | - | chr1_4:58385673-58385692 | Msa0173170:intron | 45.0% | |
| CAGGGTCTAGGAATATACTG+TGG | - | chr1_4:58385692-58385711 | Msa0173170:intron | 45.0% | |
| TACTGTGGCCCTCAGATTAT+TGG | - | chr1_4:58385707-58385726 | Msa0173170:intron | 45.0% | |
| ACTGTGGCCCTCAGATTATT+GGG | - | chr1_4:58385708-58385727 | Msa0173170:intron | 45.0% | |
| AGATTGGGTGTGTCGTATTC+GGG | + | chr1_4:58386029-58386048 | None:intergenic | 45.0% | |
| !! | TGCCAGGTGGATTTGCATTT+TGG | + | chr1_4:58386106-58386125 | None:intergenic | 45.0% |
| !! | TGGAGAAGAGGGGTCTTATT+TGG | + | chr1_4:58386131-58386150 | None:intergenic | 45.0% |
| ACATGATTACAAGCAAGCCC+TGG | + | chr1_4:58386155-58386174 | None:intergenic | 45.0% | |
| AAAGAGAGCAACTCCGCAAA+TGG | + | chr1_4:58386208-58386227 | None:intergenic | 45.0% | |
| TGACATATCTAGGCTTGGAC+TGG | - | chr1_4:58386239-58386258 | Msa0173170:intron | 45.0% | |
| GACATATCTAGGCTTGGACT+GGG | - | chr1_4:58386240-58386259 | Msa0173170:intron | 45.0% | |
| CCAGTCCTCCAAAGATATAC+GGG | - | chr1_4:58386464-58386483 | Msa0173170:intron | 45.0% | |
| ATCGACCCGTATATCTTTGG+AGG | + | chr1_4:58386472-58386491 | None:intergenic | 45.0% | |
| TTCAATCCCGTGTTTGTGCA+TGG | + | chr1_4:58386568-58386587 | None:intergenic | 45.0% | |
| AGCTCTGCATGAAATAGGCA+TGG | + | chr1_4:58387228-58387247 | None:intergenic | 45.0% | |
| TCTCACTTATCTCCTTTCCC+AGG | + | chr1_4:58387307-58387326 | None:intergenic | 45.0% | |
| !! | AGAGTGTTTTGCCGATTGAG+TGG | - | chr1_4:58387335-58387354 | Msa0173170:intron | 45.0% |
| GTGGAAATAAAGGAGGTTCC+TGG | + | chr1_4:58387361-58387380 | None:intergenic | 45.0% | |
| GCCGACAGCAGAAAAGAAAA+AGG | - | chr1_4:58387413-58387432 | Msa0173170:intron | 45.0% | |
| TGATATTGCTGCAGGATCAG+AGG | + | chr1_4:58387567-58387586 | None:intergenic | 45.0% | |
| GATCCTGCAGCAATATCAGA+AGG | - | chr1_4:58387569-58387588 | Msa0173170:intron | 45.0% | |
| GAACCTTCTGATATTGCTGC+AGG | + | chr1_4:58387575-58387594 | None:intergenic | 45.0% | |
| GCAGCAATATCAGAAGGTTC+TGG | - | chr1_4:58387575-58387594 | Msa0173170:intron | 45.0% | |
| !! | CAGAAACTTGTTGAACTCCC+TGG | + | chr1_4:58387632-58387651 | None:intergenic | 45.0% |
| GTAAGGGAAGTGATCACATC+TGG | - | chr1_4:58387651-58387670 | Msa0173170:intron | 45.0% | |
| ! | AAAGGCATACAAGGTGTCTG+AGG | + | chr1_4:58387753-58387772 | None:intergenic | 45.0% |
| ! | TCCATCCTTGATTAGCTGGA+TGG | - | chr1_4:58388144-58388163 | Msa0173170:intron | 45.0% |
| CTTCAGATAGCATGGCAAAG+AGG | + | chr1_4:58388207-58388226 | None:intergenic | 45.0% | |
| ! | TGCTTGGTCTTCAGATAGCA+TGG | + | chr1_4:58388215-58388234 | None:intergenic | 45.0% |
| CAAATGGAGCTCAAACTCCA+AGG | + | chr1_4:58388338-58388357 | None:intergenic | 45.0% | |
| ACCTACTCTAAGTGCGTGTT+TGG | - | chr1_4:58388369-58388388 | Msa0173170:intron | 45.0% | |
| ACCAAACACGCACTTAGAGT+AGG | + | chr1_4:58388373-58388392 | None:intergenic | 45.0% | |
| GAATTCACGGTAACAAGCCA+CGG | - | chr1_4:58388400-58388419 | Msa0173170:intron | 45.0% | |
| GCTCCACATCAATGTGAATG+TGG | - | chr1_4:58388468-58388487 | Msa0173170:intron | 45.0% | |
| GAACAAAGCGACTTCTTCGA+AGG | - | chr1_4:58388534-58388553 | Msa0173170:intron | 45.0% | |
| ! | TTCTTCGAAGGCACACATTC+AGG | - | chr1_4:58388546-58388565 | Msa0173170:intron | 45.0% |
| ! | TCTTCGAAGGCACACATTCA+GGG | - | chr1_4:58388547-58388566 | Msa0173170:intron | 45.0% |
| ! | ACTGTGTGCTTGTATTGGTG+TGG | - | chr1_4:58388866-58388885 | Msa0173170:intron | 45.0% |
| TGCATACAAGCACAACCAAG+TGG | + | chr1_4:58389051-58389070 | None:intergenic | 45.0% | |
| GCTTGTATGCAACTTGCATG+TGG | - | chr1_4:58389060-58389079 | Msa0173170:five_prime_UTR | 45.0% | |
| ATGAAAGCCTTGACTCCAAG+AGG | - | chr1_4:58389113-58389132 | Msa0173170:five_prime_UTR | 45.0% | |
| ATGTCTTCCTCTTGGAGTCA+AGG | + | chr1_4:58389123-58389142 | None:intergenic | 45.0% | |
| CTCCAAGAGGAAGACATCAT+CGG | - | chr1_4:58389126-58389145 | Msa0173170:five_prime_UTR | 45.0% | |
| ATCCGATGATGTCTTCCTCT+TGG | + | chr1_4:58389131-58389150 | None:intergenic | 45.0% | |
| !! | ATATATATATATATATAAGT+TGG | - | chr1_4:58385559-58385578 | Msa0173170:intron | 5.0% |
| TGATGTGCCCCACACTCTAT+AGG | + | chr1_4:58383048-58383067 | Msa0173160:intron | 50.0% | |
| !! | AGTAAGGTTCTGAACACCCC+TGG | - | chr1_4:58384011-58384030 | Msa0173170:three_prime_UTR | 50.0% |
| ! | TGGTCTGTTTCTCAGCACCA+GGG | + | chr1_4:58384031-58384050 | None:intergenic | 50.0% |
| ! | TTGGTCTGTTTCTCAGCACC+AGG | + | chr1_4:58384032-58384051 | None:intergenic | 50.0% |
| ! | TTGGGAAGCAAGTTGGGAGT+TGG | + | chr1_4:58384652-58384671 | None:intergenic | 50.0% |
| !! | GTCTTATTTGGTGTGCCAGG+TGG | + | chr1_4:58386119-58386138 | None:intergenic | 50.0% |
| ! | CCCGTATATCTTTGGAGGAC+TGG | + | chr1_4:58386467-58386486 | None:intergenic | 50.0% |
| !! | CGGGTCGATACTTTGGTTCT+TGG | - | chr1_4:58386483-58386502 | Msa0173170:intron | 50.0% |
| GCCCTATAAACAGGCTGTCT+TGG | - | chr1_4:58386790-58386809 | Msa0173170:intron | 50.0% | |
| AGACAACAATGGCCTGGGAA+AGG | - | chr1_4:58387292-58387311 | Msa0173170:intron | 50.0% | |
| TGGAGAACCACAACCCGATA+AGG | - | chr1_4:58387388-58387407 | Msa0173170:intron | 50.0% | |
| AGAACCACAACCCGATAAGG+AGG | - | chr1_4:58387391-58387410 | Msa0173170:intron | 50.0% | |
| GCCATCCAGCTAATCAAGGA+TGG | + | chr1_4:58388148-58388167 | None:intergenic | 50.0% | |
| AGTCGCCATCCAGCTAATCA+AGG | + | chr1_4:58388152-58388171 | None:intergenic | 50.0% | |
| GCTCAAACTCCAAGGATGTC+AGG | + | chr1_4:58388330-58388349 | None:intergenic | 50.0% | |
| TGTGGAGCTGAACACACAGT+TGG | + | chr1_4:58388456-58388475 | None:intergenic | 50.0% | |
| AAGGCACACATTCAGGGTCT+TGG | - | chr1_4:58388553-58388572 | Msa0173170:intron | 50.0% | |
| CACAACCAAGTGGACCAGAT+TGG | + | chr1_4:58389041-58389060 | None:intergenic | 50.0% | |
| TGATGAGGGAAGGAGGAAGG+AGG | + | chr1_4:58383125-58383144 | Msa0173160:intron | 55.0% | |
| ! | TGGGTGCCGTGTTAGTTTCG+AGG | + | chr1_4:58383177-58383196 | Msa0173160:CDS | 55.0% |
| ! | GGTCTGTTTCTCAGCACCAG+GGG | + | chr1_4:58384030-58384049 | None:intergenic | 55.0% |
| TGGCCCCCACATGTACTCTT+CGG | + | chr1_4:58385072-58385091 | None:intergenic | 55.0% | |
| GATGCAGGATAGCAGGGTCT+AGG | - | chr1_4:58385680-58385699 | Msa0173170:intron | 55.0% | |
| GCAACCAAAGACATGGCCAC+TGG | - | chr1_4:58385923-58385942 | Msa0173170:intron | 55.0% | |
| GGTGTGTCGTATTCGGGTAC+TGG | + | chr1_4:58385949-58385968 | None:intergenic | 55.0% | |
| !! | TCGGGTACTGGCCATGTCTT+TGG | + | chr1_4:58386011-58386030 | None:intergenic | 55.0% |
| GGTGTGTCGTATTCGGGTAC+TGG | + | chr1_4:58385949-58385968 | None:intergenic | 55.0% | |
| !! | GGGGTCTTATTTGGTGTGCC+AGG | + | chr1_4:58386122-58386141 | None:intergenic | 55.0% |
| GATTACAAGCAAGCCCTGGC+TGG | + | chr1_4:58386151-58386170 | None:intergenic | 55.0% | |
| !! | GTTTTGCCGATTGAGTGGCC+AGG | - | chr1_4:58387340-58387359 | Msa0173170:intron | 55.0% |
| GAGGTTCCTGGCCACTCAAT+CGG | + | chr1_4:58387349-58387368 | None:intergenic | 55.0% | |
| TCTGCTGTCGGCCTCCTTAT+CGG | + | chr1_4:58387405-58387424 | None:intergenic | 55.0% | |
| GTGCAGATGAAACTGCCACC+AGG | - | chr1_4:58387519-58387538 | Msa0173170:intron | 55.0% | |
| TGCGAAGGCTAGGAGATGTG+AGG | - | chr1_4:58387827-58387846 | Msa0173170:intron | 55.0% | |
| TGCAAGTCGCCTGACATCCT+TGG | - | chr1_4:58388318-58388337 | Msa0173170:CDS | 55.0% | |
| TTCACGGTAACAAGCCACGG+TGG | - | chr1_4:58388403-58388422 | Msa0173170:intron | 55.0% | |
| TCACGGTAACAAGCCACGGT+GGG | - | chr1_4:58388404-58388423 | Msa0173170:intron | 55.0% | |
| !! | GGGGTTTGGTGTTCGACACG+TGG | - | chr1_4:58383755-58383774 | Msa0173170:three_prime_UTR | 60.0% |
| CTGGCCAGTGGCCATGTCTT+TGG | + | chr1_4:58385930-58385949 | None:intergenic | 60.0% | |
| !! | CGTATTCGGGTACTGGCCAG+TGG | + | chr1_4:58385942-58385961 | None:intergenic | 60.0% |
| AAGACCCCTCTTCTCCAGCC+AGG | - | chr1_4:58386134-58386153 | Msa0173170:intron | 60.0% | |
| AGACCCCTCTTCTCCAGCCA+GGG | - | chr1_4:58386135-58386154 | Msa0173170:intron | 60.0% | |
| AAGCCCTGGCTGGAGAAGAG+GGG | + | chr1_4:58386141-58386160 | None:intergenic | 60.0% | |
| CAAGCCCTGGCTGGAGAAGA+GGG | + | chr1_4:58386142-58386161 | None:intergenic | 60.0% | |
| ! | TCGGCCTCCTTATCGGGTTG+TGG | + | chr1_4:58387398-58387417 | None:intergenic | 60.0% |
| CTGCTGTCGGCCTCCTTATC+GGG | + | chr1_4:58387404-58387423 | None:intergenic | 60.0% | |
| AGGATCAGAGGACCTGGTGG+CGG | + | chr1_4:58387555-58387574 | None:intergenic | 60.0% | |
| TGCAGGATCAGAGGACCTGG+TGG | + | chr1_4:58387558-58387577 | None:intergenic | 60.0% | |
| TGCTGCAGGATCAGAGGACC+TGG | + | chr1_4:58387561-58387580 | None:intergenic | 60.0% | |
| GCATAGCTTCTGTCCCACCG+TGG | + | chr1_4:58388420-58388439 | None:intergenic | 60.0% | |
| GCAAGCCCTGGCTGGAGAAG+AGG | + | chr1_4:58386143-58386162 | None:intergenic | 65.0% | |
| GGCGGGATCAGAAGACCTGG+TGG | + | chr1_4:58387537-58387556 | None:intergenic | 65.0% | |
| !! | GGTGGCGGGATCAGAAGACC+TGG | + | chr1_4:58387540-58387559 | None:intergenic | 65.0% |
| GGTCTTCTGATCCCGCCACC+AGG | - | chr1_4:58387540-58387559 | Msa0173170:intron | 65.0% | |
| GGATCAGAGGACCTGGTGGC+GGG | + | chr1_4:58387554-58387573 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 58383039 | 58389301 | 58383039 | ID=Msa0173170;Name=Msa0173170 |
| chr1_4 | mRNA | 58383039 | 58389301 | 58383039 | ID=Msa0173170-mRNA-1;Parent=Msa0173170;Name=Msa0173170-mRNA-1;_AED=0.08;_eAED=0.08;_QI=294|1|1|1|0.66|0.5|4|1527|202 |
| chr1_4 | exon | 58383039 | 58383566 | 58383039 | ID=Msa0173170-mRNA-1:exon:18096;Parent=Msa0173170-mRNA-1 |
| chr1_4 | exon | 58383713 | 58385096 | 58383713 | ID=Msa0173170-mRNA-1:exon:18095;Parent=Msa0173170-mRNA-1 |
| chr1_4 | exon | 58388253 | 58388368 | 58388253 | ID=Msa0173170-mRNA-1:exon:18094;Parent=Msa0173170-mRNA-1 |
| chr1_4 | exon | 58388900 | 58389301 | 58388900 | ID=Msa0173170-mRNA-1:exon:18093;Parent=Msa0173170-mRNA-1 |
| chr1_4 | five_prime_UTR | 58389008 | 58389301 | 58389008 | ID=Msa0173170-mRNA-1:five_prime_utr;Parent=Msa0173170-mRNA-1 |
| chr1_4 | CDS | 58388900 | 58389007 | 58388900 | ID=Msa0173170-mRNA-1:cds;Parent=Msa0173170-mRNA-1 |
| chr1_4 | CDS | 58388253 | 58388368 | 58388253 | ID=Msa0173170-mRNA-1:cds;Parent=Msa0173170-mRNA-1 |
| chr1_4 | CDS | 58384712 | 58385096 | 58384712 | ID=Msa0173170-mRNA-1:cds;Parent=Msa0173170-mRNA-1 |
| chr1_4 | three_prime_UTR | 58383713 | 58384711 | 58383713 | ID=Msa0173170-mRNA-1:three_prime_utr;Parent=Msa0173170-mRNA-1 |
| chr1_4 | three_prime_UTR | 58383039 | 58383566 | 58383039 | ID=Msa0173170-mRNA-1:three_prime_utr;Parent=Msa0173170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
