Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0772410 | sp|Q5PQN1|HERC4_RAT | 29.086 | 361 | 203 | 5 | 84 | 442 | 1 | 310 | 1.50e-29 | 125 |
| Msa0772410 | sp|Q5PQN1|HERC4_RAT | 27.240 | 279 | 147 | 7 | 27 | 298 | 46 | 275 | 3.17e-21 | 100 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0772410 | G7KEX6 | 94.595 | 444 | 22 | 1 | 1 | 444 | 1 | 442 | 0.0 | 836 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa0772410 | 0.828302 | 9.697255e-55 | -8.615850e-47 |
| Msa0003700 | Msa0772410 | 0.808604 | 2.855008e-50 | -8.615850e-47 |
| Msa0003890 | Msa0772410 | 0.821556 | 3.791263e-53 | -8.615850e-47 |
| Msa0017510 | Msa0772410 | 0.808501 | 3.002079e-50 | -8.615850e-47 |
| Msa0031340 | Msa0772410 | 0.805539 | 1.271167e-49 | -8.615850e-47 |
| Msa0035150 | Msa0772410 | 0.830101 | 3.549388e-55 | -8.615850e-47 |
| Msa0044000 | Msa0772410 | 0.813156 | 2.951617e-51 | -8.615850e-47 |
| Msa0058490 | Msa0772410 | 0.825766 | 3.918393e-54 | -8.615850e-47 |
| Msa0058510 | Msa0772410 | 0.827767 | 1.304068e-54 | -8.615850e-47 |
| Msa0069330 | Msa0772410 | 0.813981 | 1.944126e-51 | -8.615850e-47 |
| Msa0090360 | Msa0772410 | 0.823553 | 1.302022e-53 | -8.615850e-47 |
| Msa0097840 | Msa0772410 | 0.808315 | 3.290689e-50 | -8.615850e-47 |
| Msa0104550 | Msa0772410 | 0.813869 | 2.057564e-51 | -8.615850e-47 |
| Msa0602870 | Msa0772410 | 0.827088 | 1.898050e-54 | -8.615850e-47 |
| Msa0615710 | Msa0772410 | 0.810531 | 1.100801e-50 | -8.615850e-47 |
| Msa0643890 | Msa0772410 | 0.829664 | 4.534700e-55 | -8.615850e-47 |
| Msa0663390 | Msa0772410 | 0.813467 | 2.522251e-51 | -8.615850e-47 |
| Msa0663810 | Msa0772410 | 0.809623 | 1.727169e-50 | -8.615850e-47 |
| Msa0683730 | Msa0772410 | 0.816253 | 6.083016e-52 | -8.615850e-47 |
| Msa0716690 | Msa0772410 | 0.882508 | 9.825762e-71 | -8.615850e-47 |
| Msa0729720 | Msa0772410 | 0.816946 | 4.255346e-52 | -8.615850e-47 |
| Msa0740510 | Msa0772410 | 0.817625 | 2.992807e-52 | -8.615850e-47 |
| Msa0765910 | Msa0772410 | 0.804328 | 2.277663e-49 | -8.615850e-47 |
| Msa0772410 | Msa0794970 | 0.800496 | 1.402284e-48 | -8.615850e-47 |
| Msa0772410 | Msa0799160 | 0.814564 | 1.444644e-51 | -8.615850e-47 |
| Msa0772410 | Msa0806800 | 0.813781 | 2.150992e-51 | -8.615850e-47 |
| Msa0772410 | Msa0820770 | 0.818060 | 2.386890e-52 | -8.615850e-47 |
| Msa0772410 | Msa0832340 | 0.819708 | 1.007633e-52 | -8.615850e-47 |
| Msa0772410 | Msa0837600 | 0.853967 | 1.683366e-61 | -8.615850e-47 |
| Msa0772410 | Msa0847770 | 0.830244 | 3.275980e-55 | -8.615850e-47 |
| Msa0772410 | Msa0849030 | 0.802759 | 4.817897e-49 | -8.615850e-47 |
| Msa0772410 | Msa0861090 | 0.816572 | 5.160852e-52 | -8.615850e-47 |
| Msa0772410 | Msa0876190 | 0.813782 | 2.149737e-51 | -8.615850e-47 |
| Msa0772410 | Msa0880140 | 0.802321 | 5.931178e-49 | -8.615850e-47 |
| Msa0772410 | Msa0924470 | 0.803667 | 3.124407e-49 | -8.615850e-47 |
| Msa0772410 | Msa0945110 | 0.803114 | 4.067929e-49 | -8.615850e-47 |
| Msa0772410 | Msa0963270 | 0.811594 | 6.476473e-51 | -8.615850e-47 |
| Msa0772410 | Msa0969520 | 0.824670 | 7.118302e-54 | -8.615850e-47 |
| Msa0772410 | Msa1034150 | 0.800312 | 1.529031e-48 | -8.615850e-47 |
| Msa0772410 | Msa1039800 | 0.806068 | 9.841216e-50 | -8.615850e-47 |
| Msa0772410 | Msa1041670 | 0.810580 | 1.074228e-50 | -8.615850e-47 |
| Msa0772410 | Msa1046280 | 0.810667 | 1.028436e-50 | -8.615850e-47 |
| Msa0772410 | Msa1078170 | 0.821210 | 4.557406e-53 | -8.615850e-47 |
| Msa0772410 | Msa1085200 | 0.823067 | 1.690576e-53 | -8.615850e-47 |
| Msa0772410 | Msa1093840 | 0.801489 | 8.788011e-49 | -8.615850e-47 |
| Msa0772410 | Msa1102220 | 0.812577 | 3.952654e-51 | -8.615850e-47 |
| Msa0772410 | Msa1128600 | 0.809410 | 1.918279e-50 | -8.615850e-47 |
| Msa0772410 | Msa1130980 | 0.821499 | 3.908858e-53 | -8.615850e-47 |
| Msa0772410 | Msa1135470 | 0.811673 | 6.224452e-51 | -8.615850e-47 |
| Msa0772410 | Msa1137570 | 0.810058 | 1.392352e-50 | -8.615850e-47 |
| Msa0772410 | Msa1140210 | 0.801668 | 8.078087e-49 | -8.615850e-47 |
| Msa0772410 | Msa1151910 | 0.819686 | 1.019693e-52 | -8.615850e-47 |
| Msa0772410 | Msa1166560 | 0.805755 | 1.145500e-49 | -8.615850e-47 |
| Msa0772410 | Msa1169550 | 0.801419 | 9.085508e-49 | -8.615850e-47 |
| Msa0772410 | Msa1174040 | 0.800631 | 1.316326e-48 | -8.615850e-47 |
| Msa0772410 | Msa1189070 | 0.802950 | 4.398174e-49 | -8.615850e-47 |
| Msa0772410 | Msa1190920 | 0.812835 | 3.471548e-51 | -8.615850e-47 |
| Msa0772410 | Msa1193290 | 0.812855 | 3.436749e-51 | -8.615850e-47 |
| Msa0772410 | Msa1199570 | 0.822612 | 2.158119e-53 | -8.615850e-47 |
| Msa0772410 | Msa1199990 | 0.820161 | 7.936870e-53 | -8.615850e-47 |
| Msa0772410 | Msa1204530 | 0.808981 | 2.370401e-50 | -8.615850e-47 |
| Msa0772410 | Msa1244600 | 0.837541 | 4.891809e-57 | -8.615850e-47 |
| Msa0772410 | Msa1250530 | 0.837613 | 4.687814e-57 | -8.615850e-47 |
| Msa0772410 | Msa1253020 | 0.808770 | 2.630559e-50 | -8.615850e-47 |
| Msa0772410 | Msa1276660 | 0.803446 | 3.472634e-49 | -8.615850e-47 |
| Msa0772410 | Msa1279400 | 0.835963 | 1.235167e-56 | -8.615850e-47 |
| Msa0772410 | Msa1284550 | 0.813733 | 2.204346e-51 | -8.615850e-47 |
| Msa0772410 | Msa1303250 | 0.802937 | 4.426833e-49 | -8.615850e-47 |
| Msa0772410 | Msa1306840 | 0.811022 | 8.616471e-51 | -8.615850e-47 |
| Msa0772410 | Msa1328710 | 0.830603 | 2.676415e-55 | -8.615850e-47 |
| Msa0772410 | Msa1353980 | 0.817252 | 3.631815e-52 | -8.615850e-47 |
| Msa0772410 | Msa1361400 | 0.819570 | 1.083682e-52 | -8.615850e-47 |
| Msa0772410 | Msa1367590 | 0.822849 | 1.900930e-53 | -8.615850e-47 |
| Msa0772410 | Msa1370070 | -0.826336 | 2.868411e-54 | -8.615850e-47 |
| Msa0772410 | Msa1372760 | 0.802768 | 4.795312e-49 | -8.615850e-47 |
| Msa0772410 | Msa1375560 | 0.803764 | 2.982891e-49 | -8.615850e-47 |
| Msa0772410 | Msa1402400 | 0.814224 | 1.717897e-51 | -8.615850e-47 |
| Msa0772410 | Msa1410690 | 0.806667 | 7.361418e-50 | -8.615850e-47 |
| Msa0772410 | Msa1418340 | 0.818648 | 1.756720e-52 | -8.615850e-47 |
| Msa0772410 | Msa1422580 | 0.801497 | 8.756728e-49 | -8.615850e-47 |
| Msa0772410 | Msa1433390 | 0.816186 | 6.295655e-52 | -8.615850e-47 |
| Msa0772410 | Msa1435270 | 0.823338 | 1.461582e-53 | -8.615850e-47 |
| Msa0772410 | Msa1446820 | 0.806324 | 8.694138e-50 | -8.615850e-47 |
| Msa0772410 | Msa1451160 | 0.827696 | 1.356636e-54 | -8.615850e-47 |
| Msa0772410 | Msa1460020 | 0.806089 | 9.742996e-50 | -8.615850e-47 |
| Msa0772410 | Msa1462290 | 0.808425 | 3.116368e-50 | -8.615850e-47 |
| Msa0123560 | Msa0772410 | 0.804328 | 2.277596e-49 | -8.615850e-47 |
| Msa0127800 | Msa0772410 | 0.832636 | 8.440501e-56 | -8.615850e-47 |
| Msa0137840 | Msa0772410 | 0.808267 | 3.368910e-50 | -8.615850e-47 |
| Msa0148100 | Msa0772410 | 0.812030 | 5.203261e-51 | -8.615850e-47 |
| Msa0157290 | Msa0772410 | 0.809832 | 1.557279e-50 | -8.615850e-47 |
| Msa0165210 | Msa0772410 | 0.803915 | 2.776046e-49 | -8.615850e-47 |
| Msa0184040 | Msa0772410 | 0.818288 | 2.119337e-52 | -8.615850e-47 |
| Msa0195630 | Msa0772410 | 0.802468 | 5.529980e-49 | -8.615850e-47 |
| Msa0195980 | Msa0772410 | 0.815408 | 9.388341e-52 | -8.615850e-47 |
| Msa0205510 | Msa0772410 | 0.807520 | 4.856159e-50 | -8.615850e-47 |
| Msa0212930 | Msa0772410 | 0.807332 | 5.322739e-50 | -8.615850e-47 |
| Msa0212990 | Msa0772410 | 0.800646 | 1.307017e-48 | -8.615850e-47 |
| Msa0214550 | Msa0772410 | 0.801324 | 9.500895e-49 | -8.615850e-47 |
| Msa0367870 | Msa0772410 | 0.802286 | 6.028303e-49 | -8.615850e-47 |
| Msa0376350 | Msa0772410 | 0.831057 | 2.070543e-55 | -8.615850e-47 |
| Msa0391690 | Msa0772410 | 0.800886 | 1.167998e-48 | -8.615850e-47 |
| Msa0393080 | Msa0772410 | 0.803429 | 3.500906e-49 | -8.615850e-47 |
| Msa0402790 | Msa0772410 | 0.803223 | 3.862165e-49 | -8.615850e-47 |
| Msa0410650 | Msa0772410 | 0.818651 | 1.753832e-52 | -8.615850e-47 |
| Msa0424790 | Msa0772410 | 0.833831 | 4.254782e-56 | -8.615850e-47 |
| Msa0440750 | Msa0772410 | 0.843659 | 1.223256e-58 | -8.615850e-47 |
| Msa0453350 | Msa0772410 | 0.805202 | 1.496030e-49 | -8.615850e-47 |
| Msa0479170 | Msa0772410 | 0.800017 | 1.755336e-48 | -8.615850e-47 |
| Msa0481530 | Msa0772410 | 0.802129 | 6.496200e-49 | -8.615850e-47 |
| Msa0249860 | Msa0772410 | 0.803400 | 3.549647e-49 | -8.615850e-47 |
| Msa0253200 | Msa0772410 | 0.810950 | 8.932985e-51 | -8.615850e-47 |
| Msa0255090 | Msa0772410 | 0.826004 | 3.441928e-54 | -8.615850e-47 |
| Msa0259380 | Msa0772410 | 0.811074 | 8.398085e-51 | -8.615850e-47 |
| Msa0264150 | Msa0772410 | 0.804129 | 2.505430e-49 | -8.615850e-47 |
| Msa0273900 | Msa0772410 | 0.808853 | 2.525277e-50 | -8.615850e-47 |
| Msa0287650 | Msa0772410 | 0.815017 | 1.146561e-51 | -8.615850e-47 |
| Msa0292030 | Msa0772410 | 0.812179 | 4.828539e-51 | -8.615850e-47 |
| Msa0294160 | Msa0772410 | 0.800782 | 1.226074e-48 | -8.615850e-47 |
| Msa0302160 | Msa0772410 | 0.802081 | 6.645110e-49 | -8.615850e-47 |
| Msa0330340 | Msa0772410 | 0.800093 | 1.694336e-48 | -8.615850e-47 |
| Msa0336290 | Msa0772410 | 0.805360 | 1.386220e-49 | -8.615850e-47 |
| Msa0339490 | Msa0772410 | 0.802682 | 4.996007e-49 | -8.615850e-47 |
| Msa0341540 | Msa0772410 | 0.804367 | 2.235188e-49 | -8.615850e-47 |
| Msa0342310 | Msa0772410 | 0.804953 | 1.686595e-49 | -8.615850e-47 |
| Msa0345970 | Msa0772410 | 0.810770 | 9.771895e-51 | -8.615850e-47 |
| Msa0346430 | Msa0772410 | 0.801205 | 1.004726e-48 | -8.615850e-47 |
| Msa0363790 | Msa0772410 | 0.800527 | 1.382534e-48 | -8.615850e-47 |
| Msa0488560 | Msa0772410 | 0.802398 | 5.718822e-49 | -8.615850e-47 |
| Msa0507680 | Msa0772410 | 0.816730 | 4.757473e-52 | -8.615850e-47 |
| Msa0516170 | Msa0772410 | 0.832768 | 7.827253e-56 | -8.615850e-47 |
| Msa0524500 | Msa0772410 | 0.823196 | 1.577827e-53 | -8.615850e-47 |
| Msa0542290 | Msa0772410 | 0.806050 | 9.927749e-50 | -8.615850e-47 |
| Msa0542520 | Msa0772410 | 0.804475 | 2.121719e-49 | -8.615850e-47 |
| Msa0547160 | Msa0772410 | 0.803491 | 3.399316e-49 | -8.615850e-47 |
| Msa0547890 | Msa0772410 | 0.806388 | 8.426249e-50 | -8.615850e-47 |
| Msa0556060 | Msa0772410 | 0.829357 | 5.385726e-55 | -8.615850e-47 |
| Msa0577500 | Msa0772410 | 0.810589 | 1.069148e-50 | -8.615850e-47 |
| Msa0578860 | Msa0772410 | 0.802676 | 5.010907e-49 | -8.615850e-47 |
| Msa0585560 | Msa0772410 | 0.804099 | 2.541340e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0772410 | MtrunA17_Chr5g0404371 | 94.595 | 444 | 22 | 1 | 1 | 444 | 1 | 442 | 0.0 | 836 |
| Msa0772410 | MtrunA17_Chr6g0457381 | 28.926 | 363 | 208 | 9 | 86 | 420 | 7 | 347 | 3.61e-27 | 112 |
| Msa0772410 | MtrunA17_Chr6g0457381 | 39.007 | 141 | 83 | 2 | 64 | 203 | 196 | 334 | 1.06e-20 | 93.6 |
| Msa0772410 | MtrunA17_Chr6g0457381 | 23.052 | 308 | 187 | 6 | 137 | 442 | 4 | 263 | 8.89e-14 | 72.8 |
| Msa0772410 | MtrunA17_Chr3g0130621 | 26.392 | 413 | 219 | 17 | 26 | 423 | 34 | 376 | 6.10e-24 | 103 |
| Msa0772410 | MtrunA17_Chr3g0130621 | 23.232 | 396 | 235 | 9 | 56 | 442 | 8 | 343 | 6.06e-22 | 97.8 |
| Msa0772410 | MtrunA17_Chr3g0130621 | 27.302 | 315 | 158 | 10 | 141 | 444 | 39 | 293 | 5.80e-20 | 91.7 |
| Msa0772410 | MtrunA17_Chr3g0130621 | 25.212 | 353 | 192 | 12 | 28 | 372 | 89 | 377 | 3.80e-18 | 86.3 |
| Msa0772410 | MtrunA17_Chr3g0130621 | 29.572 | 257 | 156 | 9 | 28 | 273 | 141 | 383 | 3.85e-16 | 80.1 |
| Msa0772410 | MtrunA17_Chr1g0202151 | 26.585 | 410 | 221 | 14 | 55 | 442 | 270 | 621 | 6.41e-22 | 99.0 |
| Msa0772410 | MtrunA17_Chr8g0384631 | 24.465 | 327 | 175 | 10 | 108 | 423 | 41 | 306 | 4.35e-21 | 94.7 |
| Msa0772410 | MtrunA17_Chr8g0384631 | 34.031 | 191 | 115 | 5 | 26 | 215 | 69 | 249 | 1.18e-18 | 87.4 |
| Msa0772410 | MtrunA17_Chr8g0384631 | 23.242 | 327 | 186 | 9 | 53 | 372 | 39 | 307 | 1.56e-17 | 84.0 |
| Msa0772410 | MtrunA17_Chr8g0384631 | 23.607 | 305 | 173 | 7 | 143 | 442 | 24 | 273 | 1.89e-16 | 80.9 |
| Msa0772410 | MtrunA17_Chr8g0384631 | 27.778 | 198 | 117 | 5 | 256 | 443 | 41 | 222 | 1.48e-11 | 65.9 |
| Msa0772410 | MtrunA17_Chr3g0123301 | 24.866 | 374 | 251 | 11 | 70 | 416 | 153 | 523 | 3.03e-20 | 93.2 |
| Msa0772410 | MtrunA17_Chr3g0094741 | 24.682 | 393 | 216 | 13 | 64 | 434 | 320 | 654 | 4.55e-20 | 93.6 |
| Msa0772410 | MtrunA17_Chr7g0253611 | 24.714 | 437 | 238 | 14 | 21 | 443 | 148 | 507 | 7.05e-20 | 92.8 |
| Msa0772410 | MtrunA17_Chr6g0463421 | 26.368 | 402 | 204 | 16 | 55 | 428 | 267 | 604 | 1.39e-19 | 92.0 |
| Msa0772410 | MtrunA17_Chr7g0244411 | 26.066 | 422 | 224 | 16 | 24 | 424 | 233 | 587 | 3.18e-19 | 90.9 |
| Msa0772410 | MtrunA17_Chr4g0013271 | 25.428 | 409 | 219 | 14 | 38 | 424 | 45 | 389 | 3.89e-19 | 90.5 |
| Msa0772410 | MtrunA17_Chr4g0013271 | 25.373 | 335 | 209 | 12 | 136 | 443 | 35 | 355 | 9.23e-15 | 77.0 |
| Msa0772410 | MtrunA17_Chr7g0233601 | 24.878 | 410 | 239 | 11 | 83 | 441 | 47 | 438 | 3.49e-18 | 86.7 |
| Msa0772410 | MtrunA17_Chr7g0233601 | 35.802 | 162 | 101 | 2 | 55 | 216 | 252 | 410 | 6.79e-17 | 82.4 |
| Msa0772410 | MtrunA17_Chr7g0233601 | 26.525 | 377 | 203 | 10 | 31 | 392 | 124 | 441 | 9.22e-13 | 69.7 |
| Msa0772410 | MtrunA17_Chr7g0220131 | 27.425 | 299 | 146 | 9 | 52 | 328 | 162 | 411 | 1.88e-17 | 84.3 |
| Msa0772410 | MtrunA17_Chr7g0220131 | 27.049 | 366 | 208 | 18 | 66 | 390 | 65 | 412 | 3.11e-14 | 74.7 |
| Msa0772410 | MtrunA17_Chr7g0220131 | 29.798 | 198 | 113 | 7 | 246 | 435 | 41 | 220 | 2.35e-11 | 65.5 |
| Msa0772410 | MtrunA17_Chr1g0167471 | 26.331 | 357 | 219 | 12 | 123 | 443 | 219 | 567 | 2.21e-17 | 85.1 |
| Msa0772410 | MtrunA17_Chr1g0167471 | 23.636 | 385 | 238 | 14 | 55 | 403 | 265 | 629 | 3.05e-15 | 78.2 |
| Msa0772410 | MtrunA17_Chr2g0317861 | 27.302 | 315 | 171 | 7 | 135 | 442 | 128 | 391 | 2.67e-17 | 84.0 |
| Msa0772410 | MtrunA17_Chr5g0415871 | 26.494 | 385 | 218 | 14 | 84 | 433 | 16 | 370 | 3.30e-17 | 83.2 |
| Msa0772410 | MtrunA17_Chr8g0362061 | 25.000 | 404 | 218 | 18 | 64 | 442 | 286 | 629 | 1.10e-16 | 82.8 |
| Msa0772410 | MtrunA17_Chr7g0239601 | 35.196 | 179 | 91 | 9 | 14 | 185 | 47 | 207 | 1.41e-16 | 78.2 |
| Msa0772410 | MtrunA17_Chr7g0239601 | 31.217 | 189 | 112 | 5 | 259 | 441 | 31 | 207 | 1.44e-13 | 69.7 |
| Msa0772410 | MtrunA17_Chr5g0442001 | 23.469 | 392 | 221 | 13 | 64 | 434 | 310 | 643 | 2.10e-16 | 82.0 |
| Msa0772410 | MtrunA17_Chr3g0130871 | 26.286 | 350 | 191 | 10 | 108 | 438 | 21 | 322 | 1.12e-15 | 77.8 |
| Msa0772410 | MtrunA17_Chr3g0130871 | 26.621 | 293 | 141 | 9 | 170 | 444 | 29 | 265 | 7.01e-13 | 69.3 |
| Msa0772410 | MtrunA17_Chr3g0130871 | 25.566 | 309 | 176 | 7 | 51 | 354 | 17 | 276 | 5.22e-12 | 66.6 |
| Msa0772410 | MtrunA17_Chr3g0109811 | 22.704 | 392 | 211 | 12 | 64 | 428 | 305 | 631 | 1.29e-14 | 76.6 |
| Msa0772410 | MtrunA17_Chr3g0109811 | 24.014 | 279 | 172 | 6 | 158 | 407 | 292 | 559 | 8.94e-14 | 73.9 |
| Msa0772410 | MtrunA17_Chr3g0112381 | 38.971 | 136 | 72 | 5 | 55 | 185 | 29 | 158 | 9.78e-14 | 68.9 |
| Msa0772410 | MtrunA17_Chr3g0140201 | 23.729 | 354 | 184 | 12 | 99 | 417 | 28 | 330 | 2.46e-13 | 71.6 |
| Msa0772410 | MtrunA17_Chr3g0142381 | 24.735 | 283 | 158 | 5 | 159 | 429 | 45 | 284 | 3.63e-12 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0772410 | AT5G48330.1 | 61.520 | 421 | 147 | 6 | 27 | 443 | 45 | 454 | 4.97e-177 | 503 |
| Msa0772410 | AT5G48330.2 | 61.429 | 420 | 148 | 6 | 27 | 443 | 45 | 453 | 9.76e-177 | 502 |
| Msa0772410 | AT3G02510.1 | 28.375 | 363 | 209 | 9 | 86 | 420 | 9 | 348 | 5.77e-28 | 115 |
| Msa0772410 | AT3G02510.1 | 34.507 | 142 | 90 | 2 | 63 | 203 | 196 | 335 | 2.83e-17 | 84.0 |
| Msa0772410 | AT3G02510.1 | 25.680 | 331 | 169 | 10 | 30 | 335 | 114 | 392 | 3.60e-17 | 83.6 |
| Msa0772410 | AT5G63860.1 | 26.667 | 405 | 225 | 14 | 28 | 423 | 36 | 377 | 2.45e-27 | 114 |
| Msa0772410 | AT5G63860.1 | 27.362 | 307 | 199 | 8 | 28 | 321 | 89 | 384 | 8.19e-22 | 97.8 |
| Msa0772410 | AT5G63860.1 | 22.423 | 388 | 245 | 8 | 58 | 442 | 10 | 344 | 4.86e-21 | 95.5 |
| Msa0772410 | AT5G63860.1 | 25.843 | 356 | 194 | 11 | 95 | 443 | 1 | 293 | 2.91e-18 | 87.0 |
| Msa0772410 | AT5G16040.1 | 27.317 | 410 | 217 | 10 | 26 | 420 | 5 | 348 | 8.37e-27 | 111 |
| Msa0772410 | AT5G16040.1 | 26.384 | 307 | 177 | 5 | 137 | 442 | 6 | 264 | 7.07e-18 | 85.5 |
| Msa0772410 | AT3G02510.3 | 27.635 | 351 | 179 | 8 | 84 | 420 | 1 | 290 | 1.38e-22 | 98.6 |
| Msa0772410 | AT3G02510.3 | 34.507 | 142 | 90 | 2 | 63 | 203 | 138 | 277 | 1.52e-17 | 84.0 |
| Msa0772410 | AT3G02510.3 | 25.680 | 331 | 169 | 10 | 30 | 335 | 56 | 334 | 1.65e-17 | 84.0 |
| Msa0772410 | AT3G02510.3 | 26.250 | 320 | 161 | 8 | 138 | 442 | 1 | 260 | 1.79e-16 | 80.9 |
| Msa0772410 | AT3G02510.2 | 27.729 | 339 | 170 | 8 | 86 | 411 | 9 | 285 | 8.35e-22 | 95.9 |
| Msa0772410 | AT3G02510.2 | 25.203 | 369 | 195 | 10 | 26 | 379 | 5 | 307 | 5.55e-16 | 79.0 |
| Msa0772410 | AT3G02510.2 | 25.237 | 317 | 166 | 9 | 137 | 441 | 6 | 263 | 1.06e-12 | 68.9 |
| Msa0772410 | AT5G12350.1 | 24.615 | 390 | 218 | 12 | 64 | 434 | 309 | 641 | 2.86e-20 | 94.4 |
| Msa0772410 | AT5G12350.1 | 24.810 | 395 | 207 | 17 | 29 | 401 | 330 | 656 | 5.75e-12 | 68.6 |
| Msa0772410 | AT5G19420.3 | 24.041 | 391 | 219 | 12 | 64 | 434 | 313 | 645 | 6.59e-20 | 93.2 |
| Msa0772410 | AT1G76950.1 | 25.240 | 416 | 221 | 16 | 55 | 442 | 272 | 625 | 7.22e-20 | 93.2 |
| Msa0772410 | AT5G19420.1 | 24.745 | 392 | 215 | 14 | 64 | 434 | 313 | 645 | 9.55e-20 | 92.8 |
| Msa0772410 | AT5G19420.2 | 24.745 | 392 | 215 | 14 | 64 | 434 | 347 | 679 | 1.07e-19 | 92.8 |
| Msa0772410 | AT3G55580.1 | 26.619 | 417 | 247 | 13 | 49 | 441 | 102 | 483 | 1.89e-19 | 90.9 |
| Msa0772410 | AT3G55580.1 | 33.708 | 178 | 97 | 7 | 14 | 185 | 321 | 483 | 1.11e-12 | 70.1 |
| Msa0772410 | AT3G26100.3 | 25.197 | 381 | 241 | 9 | 70 | 416 | 50 | 420 | 2.89e-19 | 90.1 |
| Msa0772410 | AT3G26100.4 | 25.197 | 381 | 241 | 9 | 70 | 416 | 50 | 420 | 2.89e-19 | 90.1 |
| Msa0772410 | AT3G26100.1 | 25.197 | 381 | 241 | 9 | 70 | 416 | 50 | 420 | 2.89e-19 | 90.1 |
| Msa0772410 | AT3G26100.5 | 25.197 | 381 | 241 | 9 | 70 | 416 | 150 | 520 | 4.51e-19 | 90.1 |
| Msa0772410 | AT3G26100.6 | 25.197 | 381 | 241 | 9 | 70 | 416 | 150 | 520 | 4.51e-19 | 90.1 |
| Msa0772410 | AT3G26100.2 | 25.197 | 381 | 241 | 9 | 70 | 416 | 150 | 520 | 4.51e-19 | 90.1 |
| Msa0772410 | AT1G65920.2 | 24.173 | 393 | 211 | 11 | 64 | 433 | 247 | 575 | 7.03e-19 | 90.1 |
| Msa0772410 | AT1G65920.2 | 24.074 | 324 | 224 | 9 | 138 | 443 | 215 | 534 | 4.69e-12 | 68.9 |
| Msa0772410 | AT1G65920.1 | 24.173 | 393 | 211 | 11 | 64 | 433 | 293 | 621 | 8.58e-19 | 89.7 |
| Msa0772410 | AT1G65920.1 | 24.615 | 325 | 221 | 10 | 138 | 443 | 261 | 580 | 6.60e-12 | 68.2 |
| Msa0772410 | AT3G53830.3 | 26.777 | 422 | 242 | 16 | 46 | 441 | 87 | 467 | 1.73e-18 | 88.2 |
| Msa0772410 | AT5G60870.1 | 24.658 | 438 | 243 | 15 | 59 | 443 | 39 | 442 | 2.96e-18 | 87.0 |
| Msa0772410 | AT5G60870.1 | 26.571 | 350 | 175 | 9 | 65 | 392 | 154 | 443 | 4.55e-17 | 83.6 |
| Msa0772410 | AT5G60870.1 | 30.864 | 162 | 109 | 3 | 55 | 216 | 254 | 412 | 2.85e-16 | 81.3 |
| Msa0772410 | AT5G60870.1 | 33.571 | 140 | 84 | 3 | 53 | 185 | 303 | 440 | 5.38e-14 | 73.9 |
| Msa0772410 | AT1G27060.1 | 26.410 | 390 | 229 | 10 | 28 | 417 | 17 | 348 | 4.17e-18 | 86.3 |
| Msa0772410 | AT1G27060.1 | 26.586 | 331 | 178 | 11 | 14 | 333 | 104 | 380 | 8.20e-13 | 70.1 |
| Msa0772410 | AT3G53830.4 | 29.766 | 299 | 162 | 11 | 158 | 441 | 230 | 495 | 6.13e-18 | 86.7 |
| Msa0772410 | AT3G53830.4 | 29.181 | 281 | 153 | 12 | 65 | 328 | 244 | 495 | 8.45e-11 | 64.3 |
| Msa0772410 | AT5G16040.2 | 26.471 | 306 | 176 | 5 | 137 | 441 | 6 | 263 | 7.04e-18 | 85.1 |
| Msa0772410 | AT5G16040.2 | 25.066 | 379 | 203 | 10 | 26 | 389 | 5 | 317 | 1.50e-16 | 80.9 |
| Msa0772410 | AT5G42140.2 | 25.189 | 397 | 227 | 14 | 55 | 434 | 268 | 611 | 1.22e-17 | 86.3 |
| Msa0772410 | AT5G42140.1 | 25.189 | 397 | 227 | 14 | 55 | 434 | 268 | 611 | 1.22e-17 | 86.3 |
| Msa0772410 | AT5G08710.1 | 25.054 | 463 | 270 | 16 | 4 | 442 | 22 | 431 | 1.58e-17 | 84.7 |
| Msa0772410 | AT5G60870.2 | 26.513 | 347 | 186 | 9 | 65 | 392 | 154 | 450 | 3.75e-17 | 84.0 |
| Msa0772410 | AT5G60870.2 | 30.178 | 169 | 108 | 4 | 55 | 216 | 254 | 419 | 3.19e-14 | 74.7 |
| Msa0772410 | AT3G15430.6 | 24.691 | 405 | 241 | 8 | 49 | 444 | 44 | 393 | 4.84e-17 | 83.6 |
| Msa0772410 | AT3G15430.4 | 24.691 | 405 | 241 | 8 | 49 | 444 | 44 | 393 | 4.84e-17 | 83.6 |
| Msa0772410 | AT3G15430.2 | 24.691 | 405 | 241 | 8 | 49 | 444 | 44 | 393 | 4.84e-17 | 83.6 |
| Msa0772410 | AT3G15430.3 | 24.691 | 405 | 241 | 8 | 49 | 444 | 44 | 393 | 4.84e-17 | 83.6 |
| Msa0772410 | AT3G15430.5 | 24.691 | 405 | 241 | 8 | 49 | 444 | 44 | 393 | 4.84e-17 | 83.6 |
| Msa0772410 | AT3G15430.1 | 24.691 | 405 | 241 | 8 | 49 | 444 | 44 | 393 | 4.84e-17 | 83.6 |
| Msa0772410 | AT3G03790.3 | 26.271 | 354 | 185 | 10 | 65 | 405 | 188 | 478 | 5.22e-17 | 84.3 |
| Msa0772410 | AT3G03790.3 | 27.931 | 290 | 154 | 10 | 15 | 296 | 198 | 440 | 4.30e-14 | 75.1 |
| Msa0772410 | AT3G03790.1 | 26.271 | 354 | 185 | 10 | 65 | 405 | 185 | 475 | 5.32e-17 | 84.3 |
| Msa0772410 | AT3G03790.1 | 27.931 | 290 | 154 | 10 | 15 | 296 | 195 | 437 | 4.02e-14 | 75.5 |
| Msa0772410 | AT3G03790.2 | 26.271 | 354 | 185 | 10 | 65 | 405 | 188 | 478 | 5.57e-17 | 84.3 |
| Msa0772410 | AT3G03790.2 | 27.931 | 290 | 154 | 10 | 15 | 296 | 198 | 440 | 4.10e-14 | 75.5 |
| Msa0772410 | AT3G23270.2 | 24.570 | 407 | 218 | 17 | 48 | 428 | 239 | 582 | 7.14e-17 | 84.0 |
| Msa0772410 | AT3G23270.2 | 26.178 | 382 | 215 | 14 | 80 | 443 | 213 | 545 | 1.21e-16 | 83.2 |
| Msa0772410 | AT3G23270.1 | 24.570 | 407 | 218 | 17 | 48 | 428 | 235 | 578 | 7.58e-17 | 84.0 |
| Msa0772410 | AT3G23270.1 | 26.178 | 382 | 215 | 14 | 80 | 443 | 209 | 541 | 1.13e-16 | 83.2 |
| Msa0772410 | AT5G60870.3 | 30.864 | 162 | 109 | 3 | 55 | 216 | 85 | 243 | 7.94e-17 | 80.9 |
| Msa0772410 | AT5G60870.3 | 33.571 | 140 | 84 | 3 | 53 | 185 | 134 | 271 | 2.46e-14 | 73.6 |
| Msa0772410 | AT4G14368.1 | 25.316 | 395 | 208 | 17 | 55 | 424 | 261 | 593 | 8.92e-17 | 83.6 |
| Msa0772410 | AT4G14368.1 | 25.392 | 319 | 187 | 10 | 132 | 443 | 285 | 559 | 1.26e-16 | 83.2 |
| Msa0772410 | AT4G14368.3 | 25.472 | 318 | 186 | 10 | 132 | 442 | 278 | 551 | 1.29e-16 | 83.2 |
| Msa0772410 | AT4G14368.3 | 25.316 | 395 | 208 | 17 | 55 | 424 | 254 | 586 | 1.90e-16 | 82.8 |
| Msa0772410 | AT4G14368.2 | 25.472 | 318 | 186 | 10 | 132 | 442 | 283 | 556 | 1.37e-16 | 83.2 |
| Msa0772410 | AT4G14368.2 | 25.316 | 395 | 208 | 17 | 55 | 424 | 259 | 591 | 1.92e-16 | 82.8 |
| Msa0772410 | AT4G14368.4 | 25.472 | 318 | 186 | 10 | 132 | 442 | 285 | 558 | 1.44e-16 | 83.2 |
| Msa0772410 | AT4G14368.4 | 25.316 | 395 | 208 | 17 | 55 | 424 | 261 | 593 | 2.01e-16 | 82.4 |
| Msa0772410 | AT3G02300.2 | 27.243 | 301 | 149 | 11 | 65 | 336 | 179 | 438 | 2.93e-16 | 81.3 |
| Msa0772410 | AT3G02300.2 | 24.242 | 363 | 222 | 11 | 66 | 390 | 75 | 422 | 1.06e-13 | 73.2 |
| Msa0772410 | AT3G02300.2 | 35.172 | 145 | 80 | 4 | 268 | 407 | 75 | 210 | 3.74e-12 | 68.6 |
| Msa0772410 | AT3G02300.1 | 27.243 | 301 | 149 | 11 | 65 | 336 | 168 | 427 | 3.63e-16 | 80.9 |
| Msa0772410 | AT3G02300.1 | 24.242 | 363 | 222 | 11 | 66 | 390 | 64 | 411 | 1.24e-13 | 73.2 |
| Msa0772410 | AT3G02300.1 | 30.851 | 188 | 107 | 5 | 268 | 441 | 64 | 242 | 4.06e-12 | 68.6 |
| Msa0772410 | AT5G11580.1 | 25.513 | 439 | 222 | 15 | 28 | 413 | 37 | 423 | 7.62e-16 | 80.1 |
| Msa0772410 | AT5G11580.1 | 26.448 | 397 | 204 | 14 | 61 | 416 | 14 | 363 | 2.90e-14 | 75.5 |
| Msa0772410 | AT5G60870.4 | 27.559 | 254 | 132 | 5 | 65 | 312 | 154 | 361 | 2.49e-15 | 77.8 |
| Msa0772410 | AT5G60870.4 | 31.818 | 132 | 87 | 3 | 55 | 186 | 254 | 382 | 7.60e-12 | 67.0 |
| Msa0772410 | AT1G19880.1 | 26.710 | 307 | 152 | 8 | 159 | 444 | 45 | 299 | 7.75e-15 | 77.0 |
| Msa0772410 | AT3G47660.7 | 26.923 | 338 | 207 | 14 | 16 | 329 | 166 | 487 | 2.44e-14 | 75.9 |
| Msa0772410 | AT3G47660.7 | 24.812 | 399 | 214 | 17 | 64 | 442 | 155 | 487 | 5.32e-14 | 74.7 |
| Msa0772410 | AT3G47660.6 | 27.445 | 317 | 194 | 13 | 16 | 312 | 233 | 533 | 2.63e-14 | 75.9 |
| Msa0772410 | AT3G47660.6 | 24.812 | 399 | 214 | 17 | 64 | 442 | 222 | 554 | 6.88e-14 | 74.7 |
| Msa0772410 | AT3G47660.4 | 26.923 | 338 | 207 | 14 | 16 | 329 | 347 | 668 | 3.45e-14 | 75.5 |
| Msa0772410 | AT3G47660.4 | 24.561 | 399 | 215 | 16 | 64 | 442 | 336 | 668 | 1.02e-13 | 73.9 |
| Msa0772410 | AT3G47660.2 | 26.923 | 338 | 207 | 14 | 16 | 329 | 311 | 632 | 4.67e-14 | 75.1 |
| Msa0772410 | AT3G47660.2 | 24.812 | 399 | 214 | 17 | 64 | 442 | 300 | 632 | 9.88e-14 | 73.9 |
| Msa0772410 | AT3G47660.3 | 26.923 | 338 | 207 | 14 | 16 | 329 | 308 | 629 | 4.75e-14 | 75.1 |
| Msa0772410 | AT3G47660.3 | 24.812 | 399 | 214 | 17 | 64 | 442 | 297 | 629 | 9.96e-14 | 73.9 |
| Msa0772410 | AT3G47660.5 | 26.923 | 338 | 207 | 14 | 16 | 329 | 308 | 629 | 4.75e-14 | 75.1 |
| Msa0772410 | AT3G47660.5 | 24.812 | 399 | 214 | 17 | 64 | 442 | 297 | 629 | 9.96e-14 | 73.9 |
| Msa0772410 | AT3G47660.1 | 26.923 | 338 | 207 | 14 | 16 | 329 | 311 | 632 | 5.15e-14 | 75.1 |
| Msa0772410 | AT3G47660.1 | 24.812 | 399 | 214 | 17 | 64 | 442 | 300 | 632 | 1.16e-13 | 73.9 |
| Msa0772410 | AT1G69710.1 | 26.246 | 301 | 190 | 9 | 136 | 407 | 260 | 557 | 3.44e-13 | 72.4 |
| Msa0772410 | AT1G69710.1 | 29.661 | 236 | 141 | 9 | 68 | 281 | 412 | 644 | 3.80e-11 | 65.9 |
| Msa0772410 | AT1G69710.2 | 26.246 | 301 | 190 | 9 | 136 | 407 | 247 | 544 | 3.97e-13 | 72.4 |
| Msa0772410 | AT1G69710.2 | 29.661 | 236 | 141 | 9 | 68 | 281 | 399 | 631 | 4.03e-11 | 65.9 |
| Msa0772410 | AT5G08710.2 | 25.959 | 339 | 173 | 13 | 87 | 407 | 54 | 332 | 1.09e-12 | 69.3 |
| Msa0772410 | AT5G08710.2 | 26.061 | 330 | 188 | 11 | 32 | 357 | 55 | 332 | 1.67e-12 | 68.9 |
Find 178 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACACATCTTTGAACTTAAA+AGG | 0.155222 | 5_2:-46766501 | None:intergenic |
| TGATGGCTCTGTTTGGGTTT+GGG | 0.156700 | 5_2:+46764377 | Msa0772410:CDS |
| CTGAAGCTGTTCTGCCTTCT+AGG | 0.180347 | 5_2:+46764442 | Msa0772410:CDS |
| TCTAACCCCTCCACTCTTCT+TGG | 0.209669 | 5_2:-46764297 | None:intergenic |
| CAAAATTTGAAAACCTTCTA+AGG | 0.230502 | 5_2:-46766325 | None:intergenic |
| CCACTTCACAAGGCGATCTT+TGG | 0.235793 | 5_2:+46764208 | Msa0772410:CDS |
| AGATGGAAGGATAGGGAATA+TGG | 0.260984 | 5_2:+46765402 | Msa0772410:CDS |
| AGACTAACATGCCAATAATA+TGG | 0.268553 | 5_2:+46765548 | Msa0772410:CDS |
| ATGATGGCTCTGTTTGGGTT+TGG | 0.273871 | 5_2:+46764376 | Msa0772410:CDS |
| CACAAGGCGATCTTTGGGCT+TGG | 0.291957 | 5_2:+46764214 | Msa0772410:CDS |
| GGGGCGAGCTAGAGAAGATT+TGG | 0.300080 | 5_2:+46765951 | Msa0772410:CDS |
| AAGTCCAAGTTGTCCCCTTT+TGG | 0.301219 | 5_2:-46764406 | None:intergenic |
| CTGTGGATGGCAAGCTGTTT+GGG | 0.306555 | 5_2:+46765365 | Msa0772410:CDS |
| GCTTTGATTGATGCGTTGGC+TGG | 0.309297 | 5_2:+46766156 | Msa0772410:CDS |
| ACAAGGCGATCTTTGGGCTT+GGG | 0.310684 | 5_2:+46764215 | Msa0772410:CDS |
| AGGCGAGGTTCCCATATTAT+TGG | 0.321168 | 5_2:-46765559 | None:intergenic |
| CAACAACATTTATTTACAAT+TGG | 0.321991 | 5_2:-46766582 | None:intergenic |
| CATAATCTGGTTCTTGTTGC+TGG | 0.330642 | 5_2:+46766369 | Msa0772410:CDS |
| GATGGTGCCCTCTTGAGTTC+TGG | 0.335543 | 5_2:+46765907 | Msa0772410:CDS |
| CCAACAATCACCGTTGGTAT+AGG | 0.335970 | 5_2:+46764099 | Msa0772410:CDS |
| GAAACAGGTCTCGTTTGGTT+GGG | 0.339280 | 5_2:+46765324 | Msa0772410:intron |
| AGCGGGGCTTGGCCACTCTT+TGG | 0.346640 | 5_2:+46766017 | Msa0772410:CDS |
| CACTTCACAAGGCGATCTTT+GGG | 0.348125 | 5_2:+46764209 | Msa0772410:CDS |
| GTCTGGGTTTGATCATAATC+TGG | 0.355645 | 5_2:+46766356 | Msa0772410:CDS |
| TCAGATAGTAATGTCACTTT+GGG | 0.357204 | 5_2:+46766060 | Msa0772410:CDS |
| AGCCCCGCTGCTACGGAAAC+AGG | 0.364716 | 5_2:-46766003 | None:intergenic |
| TTCAGCAGGGCGTGCACATT+CGG | 0.368046 | 5_2:+46766197 | Msa0772410:CDS |
| GAAATGTGGGTCTGGGGATC+TGG | 0.369104 | 5_2:+46766240 | Msa0772410:CDS |
| TCAGAAGGTAAAGAAGGAAT+TGG | 0.376055 | 5_2:-46764144 | None:intergenic |
| GGATGGCAAGCTGTTTGGGT+GGG | 0.376413 | 5_2:+46765369 | Msa0772410:CDS |
| TAGAAACAACGAAGCCCAAC+TGG | 0.377481 | 5_2:+46764239 | Msa0772410:CDS |
| TTGGTGATGATGGCTCTGTT+TGG | 0.382493 | 5_2:+46764370 | Msa0772410:CDS |
| ACTCCTGTTTCCGTAGCAGC+GGG | 0.387778 | 5_2:+46766000 | Msa0772410:CDS |
| GCACTTGAACTGGAATCTAA+TGG | 0.394490 | 5_2:-46765448 | None:intergenic |
| GTTTCCGTAGCAGCGGGGCT+TGG | 0.395218 | 5_2:+46766006 | Msa0772410:CDS |
| GATGGCTCTGTTTGGGTTTG+GGG | 0.399060 | 5_2:+46764378 | Msa0772410:CDS |
| CTCTTTAAAGCTTAAACTAA+AGG | 0.399840 | 5_2:+46766523 | Msa0772410:three_prime_UTR |
| CTTTGATTGATGCGTTGGCT+GGG | 0.400886 | 5_2:+46766157 | Msa0772410:CDS |
| AGTAACGTGTATGGCCAATT+GGG | 0.400946 | 5_2:+46765931 | Msa0772410:CDS |
| CAAAAGGAGAAATGTGGGTC+TGG | 0.402480 | 5_2:+46766232 | Msa0772410:CDS |
| TCGTGTTGTGTTGGTGATGA+TGG | 0.405730 | 5_2:+46764360 | Msa0772410:CDS |
| TGGTGATGATGGCTCTGTTT+GGG | 0.406746 | 5_2:+46764371 | Msa0772410:CDS |
| TGATTGAAACAGGTCTCGTT+TGG | 0.413513 | 5_2:+46765319 | Msa0772410:intron |
| ACTGTGGATGGCAAGCTGTT+TGG | 0.414500 | 5_2:+46765364 | Msa0772410:CDS |
| CGCCCTGCTGAAACTGAAAC+CGG | 0.414741 | 5_2:-46766186 | None:intergenic |
| TCTTTAAAGCTTAAACTAAA+GGG | 0.414926 | 5_2:+46766524 | Msa0772410:three_prime_UTR |
| GGTTCACTAAATTTAGTAAC+CGG | 0.417729 | 5_2:+46766424 | Msa0772410:three_prime_UTR |
| TCCTGCTTTGATTGATGCGT+TGG | 0.421410 | 5_2:+46766152 | Msa0772410:CDS |
| AATAATATGGGAACCTCGCC+TGG | 0.424364 | 5_2:+46765561 | Msa0772410:CDS |
| GTTTGAAAATGCACTTGAAC+TGG | 0.426915 | 5_2:-46765458 | None:intergenic |
| TGCGTTGGCTGGGGAAAATC+CGG | 0.427799 | 5_2:+46766167 | Msa0772410:CDS |
| CTTCTCTAGCTCGCCCCAAT+TGG | 0.427816 | 5_2:-46765945 | None:intergenic |
| AAGTAACGTGTATGGCCAAT+TGG | 0.428223 | 5_2:+46765930 | Msa0772410:CDS |
| GGGCGAGCTAGAGAAGATTT+GGG | 0.429340 | 5_2:+46765952 | Msa0772410:CDS |
| ATCAGATAGTAATGTCACTT+TGG | 0.429388 | 5_2:+46766059 | Msa0772410:CDS |
| AATTGGATCAAGGGAGTGCT+TGG | 0.433676 | 5_2:-46766565 | None:intergenic |
| ATGAGCACGGTGATGAGTTT+CGG | 0.435487 | 5_2:+46764048 | Msa0772410:CDS |
| GGAGTGAACTTTATGTCAAC+AGG | 0.436438 | 5_2:-46765982 | None:intergenic |
| GAAAGTGCTTCAACCCTAGA+AGG | 0.437657 | 5_2:-46764456 | None:intergenic |
| GATGGCAAGCTGTTTGGGTG+GGG | 0.439388 | 5_2:+46765370 | Msa0772410:CDS |
| AGTTCTCAGCTAGGACGGGC+AGG | 0.440448 | 5_2:+46766117 | Msa0772410:CDS |
| GACTACAGATATTGCTTCAT+GGG | 0.446195 | 5_2:+46766083 | Msa0772410:CDS |
| ACACATCTTTGAACTTAAAA+GGG | 0.447389 | 5_2:-46766500 | None:intergenic |
| CATTTAATCATGAATAAAGA+TGG | 0.448731 | 5_2:+46766653 | Msa0772410:three_prime_UTR |
| TGAAGCTGTTCTGCCTTCTA+GGG | 0.448975 | 5_2:+46764443 | Msa0772410:CDS |
| AAACAGGTCTCGTTTGGTTG+GGG | 0.450780 | 5_2:+46765325 | Msa0772410:intron |
| TGAAACAGGTCTCGTTTGGT+TGG | 0.450912 | 5_2:+46765323 | Msa0772410:intron |
| TGGATGGCAAGCTGTTTGGG+TGG | 0.459079 | 5_2:+46765368 | Msa0772410:CDS |
| ATTTATTTACAATTGGATCA+AGG | 0.459687 | 5_2:-46766575 | None:intergenic |
| CCTATACCAACGGTGATTGT+TGG | 0.460140 | 5_2:-46764099 | None:intergenic |
| CAAGGCGATCTTTGGGCTTG+GGG | 0.460820 | 5_2:+46764216 | Msa0772410:CDS |
| AAAACAAATGTGGCGATCAC+AGG | 0.465702 | 5_2:+46763969 | Msa0772410:exon |
| AATCCGGTTTCAGTTTCAGC+AGG | 0.467662 | 5_2:+46766183 | Msa0772410:CDS |
| ATCATCTTTACTACTTATCA+AGG | 0.468134 | 5_2:-46766627 | None:intergenic |
| GGAAAGCCCACGACCCAGTT+GGG | 0.471539 | 5_2:-46764253 | None:intergenic |
| TTAGAAAATGTGAAGGTTTG+TGG | 0.475248 | 5_2:+46764315 | Msa0772410:CDS |
| ATCAATCAAAGCAGGAAGAT+AGG | 0.477645 | 5_2:-46766145 | None:intergenic |
| GGCGATCACAGGGAATATTC+CGG | 0.479331 | 5_2:+46763980 | Msa0772410:CDS |
| AAAAGGAGAAATGTGGGTCT+GGG | 0.480674 | 5_2:+46766233 | Msa0772410:CDS |
| CGGTTATTACTCACCGGAGT+TGG | 0.482666 | 5_2:+46764025 | Msa0772410:CDS |
| AACGAAGCCCAACTGGGTCG+TGG | 0.486773 | 5_2:+46764246 | Msa0772410:CDS |
| TCGGTTGCTCTCACATCAAA+AGG | 0.487958 | 5_2:+46766216 | Msa0772410:CDS |
| ATTTAATCATGAATAAAGAT+GGG | 0.493498 | 5_2:+46766654 | Msa0772410:three_prime_UTR |
| GAAAACCTTCTAAGGAATCC+AGG | 0.497690 | 5_2:-46766317 | None:intergenic |
| GGACTACAGATATTGCTTCA+TGG | 0.498556 | 5_2:+46766082 | Msa0772410:CDS |
| GACTAACATGCCAATAATAT+GGG | 0.499069 | 5_2:+46765549 | Msa0772410:CDS |
| TATTATGCAGATGGAAGGAT+AGG | 0.501045 | 5_2:+46765394 | Msa0772410:CDS |
| GTGGCCAAGCCCCGCTGCTA+CGG | 0.501725 | 5_2:-46766010 | None:intergenic |
| TCAACAAATGCCTTAGTGCT+AGG | 0.503940 | 5_2:+46766403 | Msa0772410:three_prime_UTR |
| TCTAAGGAATCCAGGTAAAA+CGG | 0.504606 | 5_2:-46766309 | None:intergenic |
| TTTATTTACAATTGGATCAA+GGG | 0.505190 | 5_2:-46766574 | None:intergenic |
| ATGGCTCTGTTTGGGTTTGG+GGG | 0.506439 | 5_2:+46764379 | Msa0772410:CDS |
| ATCAAAGCAGGAAGATAGGC+AGG | 0.508105 | 5_2:-46766141 | None:intergenic |
| GGTAAAGAAGGAATTGGAGT+TGG | 0.508424 | 5_2:-46764138 | None:intergenic |
| TTCTCCAGAAAACGTAGTTA+AGG | 0.508526 | 5_2:+46764476 | Msa0772410:CDS |
| AACATAGGAAAGAGTGTACA+AGG | 0.509568 | 5_2:+46766465 | Msa0772410:three_prime_UTR |
| GATGGAAGGATAGGGAATAT+GGG | 0.512559 | 5_2:+46765403 | Msa0772410:CDS |
| CGGAAAGCCCACGACCCAGT+TGG | 0.514415 | 5_2:-46764254 | None:intergenic |
| ACAATATCAGAAGGTAAAGA+AGG | 0.516505 | 5_2:-46764150 | None:intergenic |
| AAAGAAAGTCTTACAAGGAA+TGG | 0.524779 | 5_2:+46765519 | Msa0772410:CDS |
| ATGTCCAAAAGGGGACAACT+TGG | 0.525312 | 5_2:+46764402 | Msa0772410:CDS |
| TTTGATTGATGCGTTGGCTG+GGG | 0.525402 | 5_2:+46766158 | Msa0772410:CDS |
| CTCATTCCATGTTTCTCTAG+CGG | 0.530612 | 5_2:-46764274 | None:intergenic |
| AAAGAACTAAAGAGTGATCA+AGG | 0.530943 | 5_2:-46765627 | None:intergenic |
| TACTATCTGATTCATCAAGC+TGG | 0.532238 | 5_2:-46766047 | None:intergenic |
| GGTGTTGTTTCGTGTTGTGT+TGG | 0.534055 | 5_2:+46764351 | Msa0772410:CDS |
| CACTCCTGTTTCCGTAGCAG+CGG | 0.534340 | 5_2:+46765999 | Msa0772410:CDS |
| CCAAAGATCGCCTTGTGAAG+TGG | 0.541795 | 5_2:-46764208 | None:intergenic |
| AGTTCTGGAAGTAACGTGTA+TGG | 0.542194 | 5_2:+46765922 | Msa0772410:CDS |
| GACGGAACCCACGGAGCACT+CGG | 0.542264 | 5_2:+46764072 | Msa0772410:CDS |
| AAAAGGGGACAACTTGGACT+TGG | 0.548121 | 5_2:+46764408 | Msa0772410:CDS |
| ACTGCGTGGCGTTCAAGTTG+TGG | 0.548356 | 5_2:+46765591 | Msa0772410:CDS |
| GGGTGGGGCTATTATGCAGA+TGG | 0.551116 | 5_2:+46765385 | Msa0772410:CDS |
| CACATCAAAAGGAGAAATGT+GGG | 0.554457 | 5_2:+46766227 | Msa0772410:CDS |
| CCCGTCCTAGCTGAGAACTC+TGG | 0.559607 | 5_2:-46766113 | None:intergenic |
| TGCGAGAGAGTGGTAGTGAC+CGG | 0.560541 | 5_2:-46764184 | None:intergenic |
| AAACAAATGTGGCGATCACA+GGG | 0.568906 | 5_2:+46763970 | Msa0772410:exon |
| TGGTAAACCGAGTGCTCCGT+GGG | 0.572538 | 5_2:-46764079 | None:intergenic |
| GCTCTTGCATTAACTGTGGA+TGG | 0.574863 | 5_2:+46765352 | Msa0772410:CDS |
| ATTTAGTGAACCTAGCACTA+AGG | 0.575101 | 5_2:-46766413 | None:intergenic |
| GTTCTCAGCTAGGACGGGCA+GGG | 0.575236 | 5_2:+46766118 | Msa0772410:CDS |
| CGCAGTTCTTCAACCAGGCG+AGG | 0.575726 | 5_2:-46765574 | None:intergenic |
| ACCAGAGTTCTCAGCTAGGA+CGG | 0.577035 | 5_2:+46766112 | Msa0772410:CDS |
| CCAGAGTTCTCAGCTAGGAC+GGG | 0.578114 | 5_2:+46766113 | Msa0772410:CDS |
| ACGAAGCCCAACTGGGTCGT+GGG | 0.579776 | 5_2:+46764247 | Msa0772410:CDS |
| TCACATCAAAAGGAGAAATG+TGG | 0.579944 | 5_2:+46766226 | Msa0772410:CDS |
| GAATATGGGGAATGATCACT+TGG | 0.580284 | 5_2:+46765417 | Msa0772410:CDS |
| TTGGTAAACCGAGTGCTCCG+TGG | 0.581895 | 5_2:-46764080 | None:intergenic |
| GCCAACGCATCAATCAAAGC+AGG | 0.582821 | 5_2:-46766153 | None:intergenic |
| AGTCTTACAAGGAATGGCAG+AGG | 0.587231 | 5_2:+46765525 | Msa0772410:CDS |
| TTAAAGCTTAAACTAAAGGG+TGG | 0.590686 | 5_2:+46766527 | Msa0772410:three_prime_UTR |
| CGCCACGCAGTTCTTCAACC+AGG | 0.592349 | 5_2:-46765579 | None:intergenic |
| GGTTTACCAACAATCACCGT+TGG | 0.594904 | 5_2:+46764093 | Msa0772410:CDS |
| AACAGGTCTCGTTTGGTTGG+GGG | 0.594975 | 5_2:+46765326 | Msa0772410:intron |
| GTGGTAGTGACCGGCGTGGA+CGG | 0.596464 | 5_2:-46764175 | None:intergenic |
| CGTTACTTCCAGAACTCAAG+AGG | 0.596715 | 5_2:-46765915 | None:intergenic |
| ATGGAAGGATAGGGAATATG+GGG | 0.598459 | 5_2:+46765404 | Msa0772410:CDS |
| AACAGATAAGAAAATAACAT+AGG | 0.605445 | 5_2:+46766450 | Msa0772410:three_prime_UTR |
| TCACCGTGCTCATCCAACTC+CGG | 0.607277 | 5_2:-46764038 | None:intergenic |
| AGTTTCGGCGACGGAACCCA+CGG | 0.608836 | 5_2:+46764063 | Msa0772410:CDS |
| AAAGGAGAAATGTGGGTCTG+GGG | 0.610343 | 5_2:+46766234 | Msa0772410:CDS |
| GAATGAGCCAAGAAGAGTGG+AGG | 0.612574 | 5_2:+46764290 | Msa0772410:CDS |
| ATGGAATGAGCCAAGAAGAG+TGG | 0.613681 | 5_2:+46764287 | Msa0772410:CDS |
| GGCTTTCCGCTAGAGAAACA+TGG | 0.616376 | 5_2:+46764268 | Msa0772410:CDS |
| GATATTGTTACCGTCCACGC+CGG | 0.620563 | 5_2:+46764165 | Msa0772410:CDS |
| GTGAAGTGGTTGCGAGAGAG+TGG | 0.623822 | 5_2:-46764194 | None:intergenic |
| TTTAATCATGAATAAAGATG+GGG | 0.624732 | 5_2:+46766655 | Msa0772410:three_prime_UTR |
| AATGAGCCAAGAAGAGTGGA+GGG | 0.624889 | 5_2:+46764291 | Msa0772410:CDS |
| GCTGAAAAGAAAGTCTTACA+AGG | 0.625036 | 5_2:+46765514 | Msa0772410:CDS |
| GTAACGTGTATGGCCAATTG+GGG | 0.635104 | 5_2:+46765932 | Msa0772410:CDS |
| ATCCGGTTTCAGTTTCAGCA+GGG | 0.636572 | 5_2:+46766184 | Msa0772410:CDS |
| ATTATGCAGATGGAAGGATA+GGG | 0.638426 | 5_2:+46765395 | Msa0772410:CDS |
| CCGCCGCGGTTATTACTCAC+CGG | 0.638894 | 5_2:+46764019 | Msa0772410:CDS |
| GGAGGGGTTAGAAAATGTGA+AGG | 0.639727 | 5_2:+46764308 | Msa0772410:CDS |
| GCTGGCATATTGCCAAAGAG+TGG | 0.644997 | 5_2:-46766029 | None:intergenic |
| TGCGTGTGTTCCTATACCAA+CGG | 0.647861 | 5_2:-46764109 | None:intergenic |
| GGGGCTATTATGCAGATGGA+AGG | 0.650368 | 5_2:+46765389 | Msa0772410:CDS |
| GCACGCTCTTGCATTAACTG+TGG | 0.652360 | 5_2:+46765348 | Msa0772410:CDS |
| TCTCTCGCAACCACTTCACA+AGG | 0.655415 | 5_2:+46764198 | Msa0772410:CDS |
| ACTACAGATATTGCTTCATG+GGG | 0.658687 | 5_2:+46766084 | Msa0772410:CDS |
| AGAAACAACGAAGCCCAACT+GGG | 0.659931 | 5_2:+46764240 | Msa0772410:CDS |
| TCACCGGAGTTGGATGAGCA+CGG | 0.662805 | 5_2:+46764035 | Msa0772410:CDS |
| CAAGTTGTGGACATTGCATG+TGG | 0.663017 | 5_2:+46765604 | Msa0772410:CDS |
| TGGAACCAGAGTTCTCAGCT+AGG | 0.674318 | 5_2:+46766108 | Msa0772410:CDS |
| ACGGTGATGAGTTTCGGCGA+CGG | 0.675231 | 5_2:+46764054 | Msa0772410:CDS |
| TGGACGGTAACAATATCAGA+AGG | 0.675890 | 5_2:-46764159 | None:intergenic |
| CTCCTGTTTCCGTAGCAGCG+GGG | 0.681037 | 5_2:+46766001 | Msa0772410:CDS |
| CAGATAGTAATGTCACTTTG+GGG | 0.684131 | 5_2:+46766061 | Msa0772410:CDS |
| GGTAAAGTAGAAAACAAATG+TGG | 0.690039 | 5_2:+46763959 | Msa0772410:exon |
| ATGACACATTAACACCGCCA+CGG | 0.692611 | 5_2:+46763938 | Msa0772410:five_prime_UTR |
| GTTACTTCCAGAACTCAAGA+GGG | 0.707147 | 5_2:-46765914 | None:intergenic |
| ACATAGGAAAGAGTGTACAA+GGG | 0.723463 | 5_2:+46766466 | Msa0772410:three_prime_UTR |
| ATGAGCCAAGAAGAGTGGAG+GGG | 0.735998 | 5_2:+46764292 | Msa0772410:CDS |
| GAGAGTGGTAGTGACCGGCG+TGG | 0.738365 | 5_2:-46764179 | None:intergenic |
| CTACAGATATTGCTTCATGG+GGG | 0.740225 | 5_2:+46766085 | Msa0772410:CDS |
| CGCCTGGTTGAAGAACTGCG+TGG | 0.750941 | 5_2:+46765577 | Msa0772410:CDS |
| CCGGTGAGTAATAACCGCGG+CGG | 0.785799 | 5_2:-46764019 | None:intergenic |
| ACTCCGGTGAGTAATAACCG+CGG | 0.802160 | 5_2:-46764022 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTACTTTTTATAAAATATTT+TGG | + | chr5_2:46764691-46764710 | Msa0772410:intron | 10.0% |
| !!! | TTAATTCTTTTTCTAAATTT+AGG | + | chr5_2:46764877-46764896 | Msa0772410:intron | 10.0% |
| !!! | TCAATTTTCTCAAATTATTA+CGG | - | chr5_2:46765171-46765190 | None:intergenic | 15.0% |
| !!! | ATATGTAATAATTTGCTAAA+AGG | - | chr5_2:46765842-46765861 | None:intergenic | 15.0% |
| !! | ATTTAATCATGAATAAAGAT+GGG | + | chr5_2:46766654-46766673 | Msa0772410:three_prime_UTR | 15.0% |
| !!! | ATTGCATAAGTTATGTTTTT+AGG | + | chr5_2:46764557-46764576 | Msa0772410:intron | 20.0% |
| !! | TTAGTTCAAGAGTAAATTAT+CGG | + | chr5_2:46764761-46764780 | Msa0772410:intron | 20.0% |
| !! | TTTGGTATATGAAATTGTAA+GGG | + | chr5_2:46764784-46764803 | Msa0772410:intron | 20.0% |
| !!! | AATGTAGATTATGTTACTTA+CGG | - | chr5_2:46765654-46765673 | None:intergenic | 20.0% |
| !!! | TATTTTCTTATCTGTTATTC+CGG | - | chr5_2:46766446-46766465 | None:intergenic | 20.0% |
| !! | AACAGATAAGAAAATAACAT+AGG | + | chr5_2:46766450-46766469 | Msa0772410:three_prime_UTR | 20.0% |
| !!! | TCTTTAAAGCTTAAACTAAA+GGG | + | chr5_2:46766524-46766543 | Msa0772410:three_prime_UTR | 20.0% |
| !! | TTTATTTACAATTGGATCAA+GGG | - | chr5_2:46766577-46766596 | None:intergenic | 20.0% |
| !! | ATTTATTTACAATTGGATCA+AGG | - | chr5_2:46766578-46766597 | None:intergenic | 20.0% |
| !! | CAACAACATTTATTTACAAT+TGG | - | chr5_2:46766585-46766604 | None:intergenic | 20.0% |
| !! | CATTTAATCATGAATAAAGA+TGG | + | chr5_2:46766653-46766672 | Msa0772410:three_prime_UTR | 20.0% |
| !! | TTTAATCATGAATAAAGATG+GGG | + | chr5_2:46766655-46766674 | Msa0772410:three_prime_UTR | 20.0% |
| ! | GTTTGGTATATGAAATTGTA+AGG | + | chr5_2:46764783-46764802 | Msa0772410:intron | 25.0% |
| !!! | ATTTAGGATCACAATTTTGA+AGG | + | chr5_2:46764893-46764912 | Msa0772410:intron | 25.0% |
| ! | TCAATGTTTACGTGATTTAT+TGG | + | chr5_2:46764954-46764973 | Msa0772410:intron | 25.0% |
| ! | GATATAGAGACTAAATTGAA+TGG | + | chr5_2:46765008-46765027 | Msa0772410:intron | 25.0% |
| !! | AATGGCCTTCTTTAATTTAA+GGG | + | chr5_2:46765026-46765045 | Msa0772410:intron | 25.0% |
| ! | TTAGTCCCTTAAATTAAAGA+AGG | - | chr5_2:46765034-46765053 | None:intergenic | 25.0% |
| ! | GTAAAAGAGCTTATTTGAAT+AGG | - | chr5_2:46765135-46765154 | None:intergenic | 25.0% |
| ! | TTAAATGTAATCTCATGTGT+CGG | + | chr5_2:46765196-46765215 | Msa0772410:intron | 25.0% |
| ! | CCATCTTTAATACAAAGTAT+CGG | + | chr5_2:46765240-46765259 | Msa0772410:intron | 25.0% |
| !! | ATTGTTTCTTTGATTGAAAC+AGG | + | chr5_2:46765309-46765328 | Msa0772410:intron | 25.0% |
| !! | TCTACATTGCATAATTTTTC+AGG | + | chr5_2:46765666-46765685 | Msa0772410:intron | 25.0% |
| !! | CTACATTGCATAATTTTTCA+GGG | + | chr5_2:46765667-46765686 | Msa0772410:intron | 25.0% |
| !!! | AATTTAGTCTTTGAAATTGC+AGG | + | chr5_2:46765697-46765716 | Msa0772410:intron | 25.0% |
| ! | CAAAATTTGAAAACCTTCTA+AGG | - | chr5_2:46766328-46766347 | None:intergenic | 25.0% |
| ! | ACACATCTTTGAACTTAAAA+GGG | - | chr5_2:46766503-46766522 | None:intergenic | 25.0% |
| !!! | CTCTTTAAAGCTTAAACTAA+AGG | + | chr5_2:46766523-46766542 | Msa0772410:three_prime_UTR | 25.0% |
| ! | ATCATCTTTACTACTTATCA+AGG | - | chr5_2:46766630-46766649 | None:intergenic | 25.0% |
| !! | ATTTGTTTTCTACTTTACCG+TGG | - | chr5_2:46763958-46763977 | None:intergenic | 30.0% |
| GGTAAAGTAGAAAACAAATG+TGG | + | chr5_2:46763959-46763978 | Msa0772410:exon | 30.0% | |
| ACAATATCAGAAGGTAAAGA+AGG | - | chr5_2:46764153-46764172 | None:intergenic | 30.0% | |
| TTAGAAAATGTGAAGGTTTG+TGG | + | chr5_2:46764315-46764334 | Msa0772410:CDS | 30.0% | |
| TTAAGCTCTCTTACATTACA+TGG | + | chr5_2:46764512-46764531 | Msa0772410:intron | 30.0% | |
| ATAACTTATGCAATGCATGT+AGG | - | chr5_2:46764551-46764570 | None:intergenic | 30.0% | |
| ! | TCAAGAGTAAATTATCGGTT+TGG | + | chr5_2:46764766-46764785 | Msa0772410:intron | 30.0% |
| !!! | ACGTGATTTATTGGTTTTGA+TGG | + | chr5_2:46764963-46764982 | Msa0772410:intron | 30.0% |
| ! | GAATGGCCTTCTTTAATTTA+AGG | + | chr5_2:46765025-46765044 | Msa0772410:intron | 30.0% |
| !!! | TTGCTATTTTGTGAATCCAA+AGG | + | chr5_2:46765059-46765078 | Msa0772410:intron | 30.0% |
| CCGATACTTTGTATTAAAGA+TGG | - | chr5_2:46765243-46765262 | None:intergenic | 30.0% | |
| AAAGAAAGTCTTACAAGGAA+TGG | + | chr5_2:46765519-46765538 | Msa0772410:CDS | 30.0% | |
| AGACTAACATGCCAATAATA+TGG | + | chr5_2:46765548-46765567 | Msa0772410:CDS | 30.0% | |
| GACTAACATGCCAATAATAT+GGG | + | chr5_2:46765549-46765568 | Msa0772410:CDS | 30.0% | |
| AAAGAACTAAAGAGTGATCA+AGG | - | chr5_2:46765630-46765649 | None:intergenic | 30.0% | |
| TTTCCAATTTCCTTATGTTC+AGG | + | chr5_2:46765757-46765776 | Msa0772410:intron | 30.0% | |
| TTCCAATTTCCTTATGTTCA+GGG | + | chr5_2:46765758-46765777 | Msa0772410:intron | 30.0% | |
| ! | ATCAGATAGTAATGTCACTT+TGG | + | chr5_2:46766059-46766078 | Msa0772410:CDS | 30.0% |
| !! | TCAGATAGTAATGTCACTTT+GGG | + | chr5_2:46766060-46766079 | Msa0772410:CDS | 30.0% |
| ! | AGAAGGTTTTCAAATTTTGC+AGG | + | chr5_2:46766329-46766348 | Msa0772410:CDS | 30.0% |
| GGTTCACTAAATTTAGTAAC+CGG | + | chr5_2:46766424-46766443 | Msa0772410:three_prime_UTR | 30.0% | |
| GACACATCTTTGAACTTAAA+AGG | - | chr5_2:46766504-46766523 | None:intergenic | 30.0% | |
| TTAAAGCTTAAACTAAAGGG+TGG | + | chr5_2:46766527-46766546 | Msa0772410:three_prime_UTR | 30.0% | |
| !!! | ATGTTGTTGTTACTTTTGTC+TGG | + | chr5_2:46766596-46766615 | Msa0772410:three_prime_UTR | 30.0% |
| TCAGAAGGTAAAGAAGGAAT+TGG | - | chr5_2:46764147-46764166 | None:intergenic | 35.0% | |
| TTCTCCAGAAAACGTAGTTA+AGG | + | chr5_2:46764476-46764495 | Msa0772410:CDS | 35.0% | |
| ! | AGTACCTTAACTACGTTTTC+TGG | - | chr5_2:46764483-46764502 | None:intergenic | 35.0% |
| CTGACAATGTTGATATTGCT+AGG | - | chr5_2:46764640-46764659 | None:intergenic | 35.0% | |
| GCATAGCTTATTCAAACACA+TGG | + | chr5_2:46765267-46765286 | Msa0772410:intron | 35.0% | |
| TATTATGCAGATGGAAGGAT+AGG | + | chr5_2:46765394-46765413 | Msa0772410:CDS | 35.0% | |
| ATTATGCAGATGGAAGGATA+GGG | + | chr5_2:46765395-46765414 | Msa0772410:CDS | 35.0% | |
| GTTTGAAAATGCACTTGAAC+TGG | - | chr5_2:46765461-46765480 | None:intergenic | 35.0% | |
| GCTGAAAAGAAAGTCTTACA+AGG | + | chr5_2:46765514-46765533 | Msa0772410:CDS | 35.0% | |
| TACTATCTGATTCATCAAGC+TGG | - | chr5_2:46766050-46766069 | None:intergenic | 35.0% | |
| !! | CAGATAGTAATGTCACTTTG+GGG | + | chr5_2:46766061-46766080 | Msa0772410:CDS | 35.0% |
| GACTACAGATATTGCTTCAT+GGG | + | chr5_2:46766083-46766102 | Msa0772410:CDS | 35.0% | |
| ACTACAGATATTGCTTCATG+GGG | + | chr5_2:46766084-46766103 | Msa0772410:CDS | 35.0% | |
| ATCAATCAAAGCAGGAAGAT+AGG | - | chr5_2:46766148-46766167 | None:intergenic | 35.0% | |
| TCACATCAAAAGGAGAAATG+TGG | + | chr5_2:46766226-46766245 | Msa0772410:CDS | 35.0% | |
| CACATCAAAAGGAGAAATGT+GGG | + | chr5_2:46766227-46766246 | Msa0772410:CDS | 35.0% | |
| TCTGGTAAAAATGGTAGACT+TGG | + | chr5_2:46766258-46766277 | Msa0772410:CDS | 35.0% | |
| TCTAAGGAATCCAGGTAAAA+CGG | - | chr5_2:46766312-46766331 | None:intergenic | 35.0% | |
| ! | TTTTACCTGGATTCCTTAGA+AGG | + | chr5_2:46766312-46766331 | Msa0772410:CDS | 35.0% |
| ! | AGGTTTTCAAATTTTGCAGG+CGG | + | chr5_2:46766332-46766351 | Msa0772410:CDS | 35.0% |
| ATTTAGTGAACCTAGCACTA+AGG | - | chr5_2:46766416-46766435 | None:intergenic | 35.0% | |
| ! | AACATAGGAAAGAGTGTACA+AGG | + | chr5_2:46766465-46766484 | Msa0772410:three_prime_UTR | 35.0% |
| ! | ACATAGGAAAGAGTGTACAA+GGG | + | chr5_2:46766466-46766485 | Msa0772410:three_prime_UTR | 35.0% |
| ! | TGTTTTCTACTTTACCGTGG+CGG | - | chr5_2:46763955-46763974 | None:intergenic | 40.0% |
| AAAACAAATGTGGCGATCAC+AGG | + | chr5_2:46763969-46763988 | Msa0772410:exon | 40.0% | |
| AAACAAATGTGGCGATCACA+GGG | + | chr5_2:46763970-46763989 | Msa0772410:exon | 40.0% | |
| !!! | CGGTTTTTGGTTTTAGGTTC+CGG | - | chr5_2:46764002-46764021 | None:intergenic | 40.0% |
| GGTAAAGAAGGAATTGGAGT+TGG | - | chr5_2:46764141-46764160 | None:intergenic | 40.0% | |
| TGGACGGTAACAATATCAGA+AGG | - | chr5_2:46764162-46764181 | None:intergenic | 40.0% | |
| CTCATTCCATGTTTCTCTAG+CGG | - | chr5_2:46764277-46764296 | None:intergenic | 40.0% | |
| CAATGTTGATATTGCTAGGC+TGG | - | chr5_2:46764636-46764655 | None:intergenic | 40.0% | |
| CGTCGAGCAATTAAATCCTT+TGG | - | chr5_2:46765078-46765097 | None:intergenic | 40.0% | |
| TGATTGAAACAGGTCTCGTT+TGG | + | chr5_2:46765319-46765338 | Msa0772410:intron | 40.0% | |
| AGATGGAAGGATAGGGAATA+TGG | + | chr5_2:46765402-46765421 | Msa0772410:CDS | 40.0% | |
| GATGGAAGGATAGGGAATAT+GGG | + | chr5_2:46765403-46765422 | Msa0772410:CDS | 40.0% | |
| ATGGAAGGATAGGGAATATG+GGG | + | chr5_2:46765404-46765423 | Msa0772410:CDS | 40.0% | |
| GAATATGGGGAATGATCACT+TGG | + | chr5_2:46765417-46765436 | Msa0772410:CDS | 40.0% | |
| GCACTTGAACTGGAATCTAA+TGG | - | chr5_2:46765451-46765470 | None:intergenic | 40.0% | |
| ! | CTTTCTTTTCAGCAACTTCG+AGG | - | chr5_2:46765507-46765526 | None:intergenic | 40.0% |
| GTCCCTGAACATAAGGAAAT+TGG | - | chr5_2:46765763-46765782 | None:intergenic | 40.0% | |
| CAACTTTGTCCCTGAACATA+AGG | - | chr5_2:46765770-46765789 | None:intergenic | 40.0% | |
| GTTACTTCCAGAACTCAAGA+GGG | - | chr5_2:46765917-46765936 | None:intergenic | 40.0% | |
| !! | AGTTCTGGAAGTAACGTGTA+TGG | + | chr5_2:46765922-46765941 | Msa0772410:CDS | 40.0% |
| AAGTAACGTGTATGGCCAAT+TGG | + | chr5_2:46765930-46765949 | Msa0772410:CDS | 40.0% | |
| AGTAACGTGTATGGCCAATT+GGG | + | chr5_2:46765931-46765950 | Msa0772410:CDS | 40.0% | |
| GGAGTGAACTTTATGTCAAC+AGG | - | chr5_2:46765985-46766004 | None:intergenic | 40.0% | |
| GGACTACAGATATTGCTTCA+TGG | + | chr5_2:46766082-46766101 | Msa0772410:CDS | 40.0% | |
| CTACAGATATTGCTTCATGG+GGG | + | chr5_2:46766085-46766104 | Msa0772410:CDS | 40.0% | |
| AAAAGGAGAAATGTGGGTCT+GGG | + | chr5_2:46766233-46766252 | Msa0772410:CDS | 40.0% | |
| ! | GAAAACCTTCTAAGGAATCC+AGG | - | chr5_2:46766320-46766339 | None:intergenic | 40.0% |
| GTCTGGGTTTGATCATAATC+TGG | + | chr5_2:46766356-46766375 | Msa0772410:CDS | 40.0% | |
| !! | CATAATCTGGTTCTTGTTGC+TGG | + | chr5_2:46766369-46766388 | Msa0772410:CDS | 40.0% |
| TCAACAAATGCCTTAGTGCT+AGG | + | chr5_2:46766403-46766422 | Msa0772410:three_prime_UTR | 40.0% | |
| ATGACACATTAACACCGCCA+CGG | + | chr5_2:46763938-46763957 | Msa0772410:five_prime_UTR | 45.0% | |
| ATGAGCACGGTGATGAGTTT+CGG | + | chr5_2:46764048-46764067 | Msa0772410:CDS | 45.0% | |
| GGTTTACCAACAATCACCGT+TGG | + | chr5_2:46764093-46764112 | Msa0772410:CDS | 45.0% | |
| CCTATACCAACGGTGATTGT+TGG | - | chr5_2:46764102-46764121 | None:intergenic | 45.0% | |
| CCAACAATCACCGTTGGTAT+AGG | + | chr5_2:46764099-46764118 | Msa0772410:CDS | 45.0% | |
| TGCGTGTGTTCCTATACCAA+CGG | - | chr5_2:46764112-46764131 | None:intergenic | 45.0% | |
| CACTTCACAAGGCGATCTTT+GGG | + | chr5_2:46764209-46764228 | Msa0772410:CDS | 45.0% | |
| TAGAAACAACGAAGCCCAAC+TGG | + | chr5_2:46764239-46764258 | Msa0772410:CDS | 45.0% | |
| AGAAACAACGAAGCCCAACT+GGG | + | chr5_2:46764240-46764259 | Msa0772410:CDS | 45.0% | |
| ATGGAATGAGCCAAGAAGAG+TGG | + | chr5_2:46764287-46764306 | Msa0772410:CDS | 45.0% | |
| AATGAGCCAAGAAGAGTGGA+GGG | + | chr5_2:46764291-46764310 | Msa0772410:CDS | 45.0% | |
| GGAGGGGTTAGAAAATGTGA+AGG | + | chr5_2:46764308-46764327 | Msa0772410:CDS | 45.0% | |
| ! | GTTTGTGGTGCTTTTGCTTC+TGG | + | chr5_2:46764330-46764349 | Msa0772410:CDS | 45.0% |
| !! | GGTGTTGTTTCGTGTTGTGT+TGG | + | chr5_2:46764351-46764370 | Msa0772410:CDS | 45.0% |
| !! | TCGTGTTGTGTTGGTGATGA+TGG | + | chr5_2:46764360-46764379 | Msa0772410:CDS | 45.0% |
| !! | TTGGTGATGATGGCTCTGTT+TGG | + | chr5_2:46764370-46764389 | Msa0772410:CDS | 45.0% |
| !! | TGGTGATGATGGCTCTGTTT+GGG | + | chr5_2:46764371-46764390 | Msa0772410:CDS | 45.0% |
| ! | ATGATGGCTCTGTTTGGGTT+TGG | + | chr5_2:46764376-46764395 | Msa0772410:CDS | 45.0% |
| ! | TGATGGCTCTGTTTGGGTTT+GGG | + | chr5_2:46764377-46764396 | Msa0772410:CDS | 45.0% |
| ATGTCCAAAAGGGGACAACT+TGG | + | chr5_2:46764402-46764421 | Msa0772410:CDS | 45.0% | |
| ! | AAGTCCAAGTTGTCCCCTTT+TGG | - | chr5_2:46764409-46764428 | None:intergenic | 45.0% |
| AAAAGGGGACAACTTGGACT+TGG | + | chr5_2:46764408-46764427 | Msa0772410:CDS | 45.0% | |
| TGAAGCTGTTCTGCCTTCTA+GGG | + | chr5_2:46764443-46764462 | Msa0772410:CDS | 45.0% | |
| !! | GAAAGTGCTTCAACCCTAGA+AGG | - | chr5_2:46764459-46764478 | None:intergenic | 45.0% |
| TGAAACAGGTCTCGTTTGGT+TGG | + | chr5_2:46765323-46765342 | Msa0772410:intron | 45.0% | |
| GAAACAGGTCTCGTTTGGTT+GGG | + | chr5_2:46765324-46765343 | Msa0772410:intron | 45.0% | |
| AAACAGGTCTCGTTTGGTTG+GGG | + | chr5_2:46765325-46765344 | Msa0772410:intron | 45.0% | |
| GCTCTTGCATTAACTGTGGA+TGG | + | chr5_2:46765352-46765371 | Msa0772410:CDS | 45.0% | |
| AGTCTTACAAGGAATGGCAG+AGG | + | chr5_2:46765525-46765544 | Msa0772410:CDS | 45.0% | |
| AGGCGAGGTTCCCATATTAT+TGG | - | chr5_2:46765562-46765581 | None:intergenic | 45.0% | |
| AATAATATGGGAACCTCGCC+TGG | + | chr5_2:46765561-46765580 | Msa0772410:CDS | 45.0% | |
| CAAGTTGTGGACATTGCATG+TGG | + | chr5_2:46765604-46765623 | Msa0772410:CDS | 45.0% | |
| CGTTACTTCCAGAACTCAAG+AGG | - | chr5_2:46765918-46765937 | None:intergenic | 45.0% | |
| GTAACGTGTATGGCCAATTG+GGG | + | chr5_2:46765932-46765951 | Msa0772410:CDS | 45.0% | |
| ATCAAAGCAGGAAGATAGGC+AGG | - | chr5_2:46766144-46766163 | None:intergenic | 45.0% | |
| TCCTGCTTTGATTGATGCGT+TGG | + | chr5_2:46766152-46766171 | Msa0772410:CDS | 45.0% | |
| !! | CTTTGATTGATGCGTTGGCT+GGG | + | chr5_2:46766157-46766176 | Msa0772410:CDS | 45.0% |
| !! | TTTGATTGATGCGTTGGCTG+GGG | + | chr5_2:46766158-46766177 | Msa0772410:CDS | 45.0% |
| AATCCGGTTTCAGTTTCAGC+AGG | + | chr5_2:46766183-46766202 | Msa0772410:CDS | 45.0% | |
| ATCCGGTTTCAGTTTCAGCA+GGG | + | chr5_2:46766184-46766203 | Msa0772410:CDS | 45.0% | |
| TCGGTTGCTCTCACATCAAA+AGG | + | chr5_2:46766216-46766235 | Msa0772410:CDS | 45.0% | |
| CAAAAGGAGAAATGTGGGTC+TGG | + | chr5_2:46766232-46766251 | Msa0772410:CDS | 45.0% | |
| AAAGGAGAAATGTGGGTCTG+GGG | + | chr5_2:46766234-46766253 | Msa0772410:CDS | 45.0% | |
| GTCTGGGGATCTGGTAAAAA+TGG | + | chr5_2:46766249-46766268 | Msa0772410:CDS | 45.0% | |
| ! | AAATTTTGCAGGCGGTGTCT+GGG | + | chr5_2:46766340-46766359 | Msa0772410:CDS | 45.0% |
| !! | AATTGGATCAAGGGAGTGCT+TGG | - | chr5_2:46766568-46766587 | None:intergenic | 45.0% |
| !!! | TACTTTTTATAAAATATTTT+GGG | + | chr5_2:46764692-46764711 | Msa0772410:intron | 5.0% |
| GGCGATCACAGGGAATATTC+CGG | + | chr5_2:46763980-46763999 | Msa0772410:CDS | 50.0% | |
| CCTAAAACCAAAAACCGCCG+CGG | + | chr5_2:46764005-46764024 | Msa0772410:CDS | 50.0% | |
| ! | GTAATAACCGCGGCGGTTTT+TGG | - | chr5_2:46764015-46764034 | None:intergenic | 50.0% |
| ACTCCGGTGAGTAATAACCG+CGG | - | chr5_2:46764025-46764044 | None:intergenic | 50.0% | |
| CGGTTATTACTCACCGGAGT+TGG | + | chr5_2:46764025-46764044 | Msa0772410:CDS | 50.0% | |
| GATATTGTTACCGTCCACGC+CGG | + | chr5_2:46764165-46764184 | Msa0772410:CDS | 50.0% | |
| TCTCTCGCAACCACTTCACA+AGG | + | chr5_2:46764198-46764217 | Msa0772410:CDS | 50.0% | |
| CCAAAGATCGCCTTGTGAAG+TGG | - | chr5_2:46764211-46764230 | None:intergenic | 50.0% | |
| CCACTTCACAAGGCGATCTT+TGG | + | chr5_2:46764208-46764227 | Msa0772410:CDS | 50.0% | |
| ACAAGGCGATCTTTGGGCTT+GGG | + | chr5_2:46764215-46764234 | Msa0772410:CDS | 50.0% | |
| GGCTTTCCGCTAGAGAAACA+TGG | + | chr5_2:46764268-46764287 | Msa0772410:CDS | 50.0% | |
| GAATGAGCCAAGAAGAGTGG+AGG | + | chr5_2:46764290-46764309 | Msa0772410:CDS | 50.0% | |
| ATGAGCCAAGAAGAGTGGAG+GGG | + | chr5_2:46764292-46764311 | Msa0772410:CDS | 50.0% | |
| TCTAACCCCTCCACTCTTCT+TGG | - | chr5_2:46764300-46764319 | None:intergenic | 50.0% | |
| ! | GATGGCTCTGTTTGGGTTTG+GGG | + | chr5_2:46764378-46764397 | Msa0772410:CDS | 50.0% |
| ! | ATGGCTCTGTTTGGGTTTGG+GGG | + | chr5_2:46764379-46764398 | Msa0772410:CDS | 50.0% |
| GGTTTGGGGGATGTCCAAAA+GGG | + | chr5_2:46764392-46764411 | Msa0772410:CDS | 50.0% | |
| GTTTGGGGGATGTCCAAAAG+GGG | + | chr5_2:46764393-46764412 | Msa0772410:CDS | 50.0% | |
| CTGAAGCTGTTCTGCCTTCT+AGG | + | chr5_2:46764442-46764461 | Msa0772410:CDS | 50.0% | |
| CGTCGTTGTGTGTGAGTTTC+AGG | - | chr5_2:46764591-46764610 | None:intergenic | 50.0% | |
| GAAACTCACACACAACGACG+AGG | + | chr5_2:46764591-46764610 | Msa0772410:intron | 50.0% | |
| ! | CGACGAGGTCCATTTTGAAC+CGG | + | chr5_2:46764606-46764625 | Msa0772410:intron | 50.0% |
| ! | GACGAGGTCCATTTTGAACC+GGG | + | chr5_2:46764607-46764626 | Msa0772410:intron | 50.0% |
| ATATTGCTAGGCTGGACACC+CGG | - | chr5_2:46764628-46764647 | None:intergenic | 50.0% | |
| AACAGGTCTCGTTTGGTTGG+GGG | + | chr5_2:46765326-46765345 | Msa0772410:intron | 50.0% | |
| GCACGCTCTTGCATTAACTG+TGG | + | chr5_2:46765348-46765367 | Msa0772410:CDS | 50.0% | |
| ACTGTGGATGGCAAGCTGTT+TGG | + | chr5_2:46765364-46765383 | Msa0772410:CDS | 50.0% | |
| CTGTGGATGGCAAGCTGTTT+GGG | + | chr5_2:46765365-46765384 | Msa0772410:CDS | 50.0% | |
| GGGGCTATTATGCAGATGGA+AGG | + | chr5_2:46765389-46765408 | Msa0772410:CDS | 50.0% | |
| AACTCTCGAGTGCCCTTATC+AGG | + | chr5_2:46765883-46765902 | Msa0772410:intron | 50.0% | |
| ! | AGGGCACCATCACCTGATAA+GGG | - | chr5_2:46765898-46765917 | None:intergenic | 50.0% |
| GGGCGAGCTAGAGAAGATTT+GGG | + | chr5_2:46765952-46765971 | Msa0772410:CDS | 50.0% | |
| GCTGGCATATTGCCAAAGAG+TGG | - | chr5_2:46766032-46766051 | None:intergenic | 50.0% | |
| CAGATATTGCTTCATGGGGG+TGG | + | chr5_2:46766088-46766107 | Msa0772410:CDS | 50.0% | |
| TGGAACCAGAGTTCTCAGCT+AGG | + | chr5_2:46766108-46766127 | Msa0772410:CDS | 50.0% | |
| ACCAGAGTTCTCAGCTAGGA+CGG | + | chr5_2:46766112-46766131 | Msa0772410:CDS | 50.0% | |
| GCCAACGCATCAATCAAAGC+AGG | - | chr5_2:46766156-46766175 | None:intergenic | 50.0% | |
| ! | GCTTTGATTGATGCGTTGGC+TGG | + | chr5_2:46766156-46766175 | Msa0772410:CDS | 50.0% |
| !! | CGAAGATGAGCCGTTTTACC+TGG | + | chr5_2:46766299-46766318 | Msa0772410:CDS | 50.0% |
| ! | CAAATTTTGCAGGCGGTGTC+TGG | + | chr5_2:46766339-46766358 | Msa0772410:CDS | 50.0% |
| !!! | CCGCGGCGGTTTTTGGTTTT+AGG | - | chr5_2:46764008-46764027 | None:intergenic | 55.0% |
| TCACCGGAGTTGGATGAGCA+CGG | + | chr5_2:46764035-46764054 | Msa0772410:CDS | 55.0% | |
| TCACCGTGCTCATCCAACTC+CGG | - | chr5_2:46764041-46764060 | None:intergenic | 55.0% | |
| ACGGTGATGAGTTTCGGCGA+CGG | + | chr5_2:46764054-46764073 | Msa0772410:CDS | 55.0% | |
| TGGTAAACCGAGTGCTCCGT+GGG | - | chr5_2:46764082-46764101 | None:intergenic | 55.0% | |
| TTGGTAAACCGAGTGCTCCG+TGG | - | chr5_2:46764083-46764102 | None:intergenic | 55.0% | |
| ! | TGCGAGAGAGTGGTAGTGAC+CGG | - | chr5_2:46764187-46764206 | None:intergenic | 55.0% |
| GTGAAGTGGTTGCGAGAGAG+TGG | - | chr5_2:46764197-46764216 | None:intergenic | 55.0% | |
| CACAAGGCGATCTTTGGGCT+TGG | + | chr5_2:46764214-46764233 | Msa0772410:CDS | 55.0% | |
| CAAGGCGATCTTTGGGCTTG+GGG | + | chr5_2:46764216-46764235 | Msa0772410:CDS | 55.0% | |
| GGGTTTGGGGGATGTCCAAA+AGG | + | chr5_2:46764391-46764410 | Msa0772410:CDS | 55.0% | |
| GCTGGACACCCGGTTCAAAA+TGG | - | chr5_2:46764618-46764637 | None:intergenic | 55.0% | |
| TGGATGGCAAGCTGTTTGGG+TGG | + | chr5_2:46765368-46765387 | Msa0772410:CDS | 55.0% | |
| GGATGGCAAGCTGTTTGGGT+GGG | + | chr5_2:46765369-46765388 | Msa0772410:CDS | 55.0% | |
| GATGGCAAGCTGTTTGGGTG+GGG | + | chr5_2:46765370-46765389 | Msa0772410:CDS | 55.0% | |
| GGGTGGGGCTATTATGCAGA+TGG | + | chr5_2:46765385-46765404 | Msa0772410:CDS | 55.0% | |
| !! | ACTGCGTGGCGTTCAAGTTG+TGG | + | chr5_2:46765591-46765610 | Msa0772410:CDS | 55.0% |
| CGAGTGCCCTTATCAGGTGA+TGG | + | chr5_2:46765889-46765908 | Msa0772410:intron | 55.0% | |
| !! | GAGGGCACCATCACCTGATA+AGG | - | chr5_2:46765899-46765918 | None:intergenic | 55.0% |
| GATGGTGCCCTCTTGAGTTC+TGG | + | chr5_2:46765907-46765926 | Msa0772410:CDS | 55.0% | |
| ! | CTTCTCTAGCTCGCCCCAAT+TGG | - | chr5_2:46765948-46765967 | None:intergenic | 55.0% |
| GGGGCGAGCTAGAGAAGATT+TGG | + | chr5_2:46765951-46765970 | Msa0772410:CDS | 55.0% | |
| CACTCCTGTTTCCGTAGCAG+CGG | + | chr5_2:46765999-46766018 | Msa0772410:CDS | 55.0% | |
| ACTCCTGTTTCCGTAGCAGC+GGG | + | chr5_2:46766000-46766019 | Msa0772410:CDS | 55.0% | |
| CCAGAGTTCTCAGCTAGGAC+GGG | + | chr5_2:46766113-46766132 | Msa0772410:CDS | 55.0% | |
| !! | TGCGTTGGCTGGGGAAAATC+CGG | + | chr5_2:46766167-46766186 | Msa0772410:CDS | 55.0% |
| CGCCCTGCTGAAACTGAAAC+CGG | - | chr5_2:46766189-46766208 | None:intergenic | 55.0% | |
| TTCAGCAGGGCGTGCACATT+CGG | + | chr5_2:46766197-46766216 | Msa0772410:CDS | 55.0% | |
| GAAATGTGGGTCTGGGGATC+TGG | + | chr5_2:46766240-46766259 | Msa0772410:CDS | 55.0% | |
| CCGGTGAGTAATAACCGCGG+CGG | - | chr5_2:46764022-46764041 | None:intergenic | 60.0% | |
| CCGCCGCGGTTATTACTCAC+CGG | + | chr5_2:46764019-46764038 | Msa0772410:CDS | 60.0% | |
| AGTTTCGGCGACGGAACCCA+CGG | + | chr5_2:46764063-46764082 | Msa0772410:CDS | 60.0% | |
| AACGAAGCCCAACTGGGTCG+TGG | + | chr5_2:46764246-46764265 | Msa0772410:CDS | 60.0% | |
| ACGAAGCCCAACTGGGTCGT+GGG | + | chr5_2:46764247-46764266 | Msa0772410:CDS | 60.0% | |
| GGAAAGCCCACGACCCAGTT+GGG | - | chr5_2:46764256-46764275 | None:intergenic | 60.0% | |
| CGCAGTTCTTCAACCAGGCG+AGG | - | chr5_2:46765577-46765596 | None:intergenic | 60.0% | |
| CGCCTGGTTGAAGAACTGCG+TGG | + | chr5_2:46765577-46765596 | Msa0772410:CDS | 60.0% | |
| CGCCACGCAGTTCTTCAACC+AGG | - | chr5_2:46765582-46765601 | None:intergenic | 60.0% | |
| CTCCTGTTTCCGTAGCAGCG+GGG | + | chr5_2:46766001-46766020 | Msa0772410:CDS | 60.0% | |
| CCCGTCCTAGCTGAGAACTC+TGG | - | chr5_2:46766116-46766135 | None:intergenic | 60.0% | |
| AGTTCTCAGCTAGGACGGGC+AGG | + | chr5_2:46766117-46766136 | Msa0772410:CDS | 60.0% | |
| GTTCTCAGCTAGGACGGGCA+GGG | + | chr5_2:46766118-46766137 | Msa0772410:CDS | 60.0% | |
| ! | GACGGAACCCACGGAGCACT+CGG | + | chr5_2:46764072-46764091 | Msa0772410:CDS | 65.0% |
| ! | GTGGTAGTGACCGGCGTGGA+CGG | - | chr5_2:46764178-46764197 | None:intergenic | 65.0% |
| ! | GAGAGTGGTAGTGACCGGCG+TGG | - | chr5_2:46764182-46764201 | None:intergenic | 65.0% |
| CGGAAAGCCCACGACCCAGT+TGG | - | chr5_2:46764257-46764276 | None:intergenic | 65.0% | |
| AGCCCCGCTGCTACGGAAAC+AGG | - | chr5_2:46766006-46766025 | None:intergenic | 65.0% | |
| GTTTCCGTAGCAGCGGGGCT+TGG | + | chr5_2:46766006-46766025 | Msa0772410:CDS | 65.0% | |
| AGCGGGGCTTGGCCACTCTT+TGG | + | chr5_2:46766017-46766036 | Msa0772410:CDS | 65.0% | |
| GTGGCCAAGCCCCGCTGCTA+CGG | - | chr5_2:46766013-46766032 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 46763932 | 46766685 | 46763932 | ID=Msa0772410;Name=Msa0772410 |
| chr5_2 | mRNA | 46763932 | 46766685 | 46763932 | ID=Msa0772410-mRNA-1;Parent=Msa0772410;Name=Msa0772410-mRNA-1;_AED=0.00;_eAED=0.00;_QI=44|1|1|1|1|1|3|290|444 |
| chr5_2 | exon | 46763932 | 46764497 | 46763932 | ID=Msa0772410-mRNA-1:exon:13935;Parent=Msa0772410-mRNA-1 |
| chr5_2 | exon | 46765331 | 46765652 | 46765331 | ID=Msa0772410-mRNA-1:exon:13936;Parent=Msa0772410-mRNA-1 |
| chr5_2 | exon | 46765905 | 46766685 | 46765905 | ID=Msa0772410-mRNA-1:exon:13937;Parent=Msa0772410-mRNA-1 |
| chr5_2 | five_prime_UTR | 46763932 | 46763975 | 46763932 | ID=Msa0772410-mRNA-1:five_prime_utr;Parent=Msa0772410-mRNA-1 |
| chr5_2 | CDS | 46763976 | 46764497 | 46763976 | ID=Msa0772410-mRNA-1:cds;Parent=Msa0772410-mRNA-1 |
| chr5_2 | CDS | 46765331 | 46765652 | 46765331 | ID=Msa0772410-mRNA-1:cds;Parent=Msa0772410-mRNA-1 |
| chr5_2 | CDS | 46765905 | 46766395 | 46765905 | ID=Msa0772410-mRNA-1:cds;Parent=Msa0772410-mRNA-1 |
| chr5_2 | three_prime_UTR | 46766396 | 46766685 | 46766396 | ID=Msa0772410-mRNA-1:three_prime_utr;Parent=Msa0772410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
