Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0833790 | XP_003611292.2 | 92.754 | 138 | 10 | 0 | 17 | 154 | 17 | 154 | 3.78e-89 | 266 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0833790 | G7JW17 | 92.754 | 138 | 10 | 0 | 17 | 154 | 17 | 154 | 1.80e-89 | 266 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002690 | Msa0833790 | 0.803601 | 3.225252e-49 | -8.615850e-47 |
| Msa0002700 | Msa0833790 | 0.804607 | 1.991704e-49 | -8.615850e-47 |
| Msa0021570 | Msa0833790 | 0.806344 | 8.610441e-50 | -8.615850e-47 |
| Msa0028410 | Msa0833790 | 0.802848 | 4.618183e-49 | -8.615850e-47 |
| Msa0044700 | Msa0833790 | 0.811675 | 6.218331e-51 | -8.615850e-47 |
| Msa0046020 | Msa0833790 | 0.808142 | 3.582045e-50 | -8.615850e-47 |
| Msa0069230 | Msa0833790 | 0.800122 | 1.671180e-48 | -8.615850e-47 |
| Msa0069590 | Msa0833790 | 0.806596 | 7.617209e-50 | -8.615850e-47 |
| Msa0075820 | Msa0833790 | 0.802529 | 5.372832e-49 | -8.615850e-47 |
| Msa0105500 | Msa0833790 | 0.804455 | 2.142327e-49 | -8.615850e-47 |
| Msa0116780 | Msa0833790 | 0.803963 | 2.712628e-49 | -8.615850e-47 |
| Msa0607070 | Msa0833790 | 0.832901 | 7.256098e-56 | -8.615850e-47 |
| Msa0608280 | Msa0833790 | 0.814362 | 1.601773e-51 | -8.615850e-47 |
| Msa0608720 | Msa0833790 | 0.801931 | 7.131639e-49 | -8.615850e-47 |
| Msa0612950 | Msa0833790 | 0.818722 | 1.689909e-52 | -8.615850e-47 |
| Msa0615460 | Msa0833790 | 0.804976 | 1.667711e-49 | -8.615850e-47 |
| Msa0646310 | Msa0833790 | 0.810656 | 1.034424e-50 | -8.615850e-47 |
| Msa0653690 | Msa0833790 | 0.812432 | 4.253192e-51 | -8.615850e-47 |
| Msa0687650 | Msa0833790 | 0.831576 | 1.543479e-55 | -8.615850e-47 |
| Msa0687740 | Msa0833790 | 0.827573 | 1.451888e-54 | -8.615850e-47 |
| Msa0688350 | Msa0833790 | 0.803595 | 3.234379e-49 | -8.615850e-47 |
| Msa0698510 | Msa0833790 | 0.812015 | 5.243953e-51 | -8.615850e-47 |
| Msa0698680 | Msa0833790 | 0.815209 | 1.039223e-51 | -8.615850e-47 |
| Msa0711860 | Msa0833790 | 0.802626 | 5.130207e-49 | -8.615850e-47 |
| Msa0754340 | Msa0833790 | 0.939121 | 2.161359e-99 | -8.615850e-47 |
| Msa0770050 | Msa0833790 | 0.804099 | 2.541007e-49 | -8.615850e-47 |
| Msa0793130 | Msa0833790 | 0.809242 | 2.084546e-50 | -8.615850e-47 |
| Msa0796110 | Msa0833790 | 0.922291 | 1.190502e-88 | -8.615850e-47 |
| Msa0807840 | Msa0833790 | 0.807260 | 5.513761e-50 | -8.615850e-47 |
| Msa0811710 | Msa0833790 | 0.805241 | 1.467720e-49 | -8.615850e-47 |
| Msa0831710 | Msa0833790 | 0.810853 | 9.376015e-51 | -8.615850e-47 |
| Msa0833790 | Msa0833980 | 0.807634 | 4.593747e-50 | -8.615850e-47 |
| Msa0833790 | Msa0837040 | 0.806122 | 9.586702e-50 | -8.615850e-47 |
| Msa0833790 | Msa0866150 | 0.807644 | 4.569921e-50 | -8.615850e-47 |
| Msa0833790 | Msa0868500 | 0.812904 | 3.352996e-51 | -8.615850e-47 |
| Msa0833790 | Msa0868510 | 0.809176 | 2.153060e-50 | -8.615850e-47 |
| Msa0833790 | Msa0868520 | 0.814886 | 1.225805e-51 | -8.615850e-47 |
| Msa0833790 | Msa0871860 | 0.818494 | 1.903560e-52 | -8.615850e-47 |
| Msa0833790 | Msa0905200 | 0.806916 | 6.520435e-50 | -8.615850e-47 |
| Msa0833790 | Msa0905210 | 0.809803 | 1.579625e-50 | -8.615850e-47 |
| Msa0833790 | Msa0933320 | 0.818639 | 1.764410e-52 | -8.615850e-47 |
| Msa0833790 | Msa0934100 | 0.808425 | 3.117609e-50 | -8.615850e-47 |
| Msa0833790 | Msa0937180 | 0.805658 | 1.200083e-49 | -8.615850e-47 |
| Msa0833790 | Msa0937190 | 0.818639 | 1.764994e-52 | -8.615850e-47 |
| Msa0833790 | Msa0941410 | 0.805826 | 1.106563e-49 | -8.615850e-47 |
| Msa0833790 | Msa0941420 | 0.809286 | 2.039636e-50 | -8.615850e-47 |
| Msa0833790 | Msa0945160 | 0.800710 | 1.268521e-48 | -8.615850e-47 |
| Msa0833790 | Msa0971100 | 0.818789 | 1.632030e-52 | -8.615850e-47 |
| Msa0833790 | Msa0978540 | 0.815984 | 6.985507e-52 | -8.615850e-47 |
| Msa0833790 | Msa0978550 | 0.809916 | 1.493540e-50 | -8.615850e-47 |
| Msa0833790 | Msa0978560 | 0.815093 | 1.103177e-51 | -8.615850e-47 |
| Msa0833790 | Msa1002550 | 0.802794 | 4.736496e-49 | -8.615850e-47 |
| Msa0833790 | Msa1031190 | 0.809928 | 1.484443e-50 | -8.615850e-47 |
| Msa0833790 | Msa1070370 | 0.811823 | 5.774140e-51 | -8.615850e-47 |
| Msa0833790 | Msa1119420 | 0.810045 | 1.400936e-50 | -8.615850e-47 |
| Msa0833790 | Msa1131010 | 0.801821 | 7.514335e-49 | -8.615850e-47 |
| Msa0833790 | Msa1132740 | 0.917677 | 3.968596e-86 | -8.615850e-47 |
| Msa0833790 | Msa1134800 | 0.801335 | 9.451724e-49 | -8.615850e-47 |
| Msa0833790 | Msa1158180 | 0.808895 | 2.473684e-50 | -8.615850e-47 |
| Msa0833790 | Msa1175340 | 0.811271 | 7.611623e-51 | -8.615850e-47 |
| Msa0833790 | Msa1199700 | 0.805130 | 1.548662e-49 | -8.615850e-47 |
| Msa0833790 | Msa1211930 | 0.829732 | 4.365546e-55 | -8.615850e-47 |
| Msa0833790 | Msa1225280 | 0.812928 | 3.312258e-51 | -8.615850e-47 |
| Msa0833790 | Msa1244940 | 0.814647 | 1.384838e-51 | -8.615850e-47 |
| Msa0833790 | Msa1263600 | 0.802072 | 6.673824e-49 | -8.615850e-47 |
| Msa0833790 | Msa1292060 | 0.807602 | 4.664225e-50 | -8.615850e-47 |
| Msa0833790 | Msa1303040 | 0.805356 | 1.388915e-49 | -8.615850e-47 |
| Msa0833790 | Msa1303690 | 0.802704 | 4.944209e-49 | -8.615850e-47 |
| Msa0833790 | Msa1317090 | 0.802745 | 4.848823e-49 | -8.615850e-47 |
| Msa0833790 | Msa1325270 | 0.805451 | 1.326253e-49 | -8.615850e-47 |
| Msa0833790 | Msa1334690 | 0.828482 | 8.772406e-55 | -8.615850e-47 |
| Msa0833790 | Msa1350130 | 0.800880 | 1.171118e-48 | -8.615850e-47 |
| Msa0833790 | Msa1363170 | 0.804355 | 2.247637e-49 | -8.615850e-47 |
| Msa0833790 | Msa1372460 | 0.800276 | 1.555045e-48 | -8.615850e-47 |
| Msa0833790 | Msa1373420 | 0.809353 | 1.973425e-50 | -8.615850e-47 |
| Msa0833790 | Msa1386820 | 0.834627 | 2.687319e-56 | -8.615850e-47 |
| Msa0833790 | Msa1388010 | 0.806679 | 7.318138e-50 | -8.615850e-47 |
| Msa0833790 | Msa1389990 | 0.800669 | 1.293273e-48 | -8.615850e-47 |
| Msa0833790 | Msa1407160 | 0.800820 | 1.204673e-48 | -8.615850e-47 |
| Msa0833790 | Msa1425050 | 0.803772 | 2.971276e-49 | -8.615850e-47 |
| Msa0833790 | Msa1444750 | 0.800149 | 1.650487e-48 | -8.615850e-47 |
| Msa0833790 | Msa1453900 | 0.804971 | 1.672310e-49 | -8.615850e-47 |
| Msa0833790 | Msa1460340 | 0.802099 | 6.587062e-49 | -8.615850e-47 |
| Msa0833790 | Msa1462700 | 0.816598 | 5.092597e-52 | -8.615850e-47 |
| Msa0124460 | Msa0833790 | 0.806537 | 7.837932e-50 | -8.615850e-47 |
| Msa0127110 | Msa0833790 | 0.805261 | 1.453595e-49 | -8.615850e-47 |
| Msa0145990 | Msa0833790 | 0.804450 | 2.148016e-49 | -8.615850e-47 |
| Msa0163170 | Msa0833790 | 0.802264 | 6.091617e-49 | -8.615850e-47 |
| Msa0168950 | Msa0833790 | 0.803888 | 2.811759e-49 | -8.615850e-47 |
| Msa0231180 | Msa0833790 | 0.805625 | 1.219585e-49 | -8.615850e-47 |
| Msa0371010 | Msa0833790 | 0.800187 | 1.621169e-48 | -8.615850e-47 |
| Msa0377990 | Msa0833790 | 0.800576 | 1.350637e-48 | -8.615850e-47 |
| Msa0384570 | Msa0833790 | 0.806639 | 7.460310e-50 | -8.615850e-47 |
| Msa0386230 | Msa0833790 | 0.801769 | 7.702280e-49 | -8.615850e-47 |
| Msa0404710 | Msa0833790 | 0.811293 | 7.528196e-51 | -8.615850e-47 |
| Msa0427600 | Msa0833790 | 0.800699 | 1.275075e-48 | -8.615850e-47 |
| Msa0428280 | Msa0833790 | 0.804853 | 1.769730e-49 | -8.615850e-47 |
| Msa0437820 | Msa0833790 | 0.803021 | 4.251499e-49 | -8.615850e-47 |
| Msa0439090 | Msa0833790 | 0.800773 | 1.231694e-48 | -8.615850e-47 |
| Msa0462240 | Msa0833790 | 0.802294 | 6.006048e-49 | -8.615850e-47 |
| Msa0462530 | Msa0833790 | 0.811047 | 8.511565e-51 | -8.615850e-47 |
| Msa0474290 | Msa0833790 | 0.808637 | 2.808270e-50 | -8.615850e-47 |
| Msa0269610 | Msa0833790 | 0.800057 | 1.722715e-48 | -8.615850e-47 |
| Msa0290590 | Msa0833790 | 0.804862 | 1.761927e-49 | -8.615850e-47 |
| Msa0296100 | Msa0833790 | 0.816960 | 4.224287e-52 | -8.615850e-47 |
| Msa0298820 | Msa0833790 | 0.806851 | 6.730951e-50 | -8.615850e-47 |
| Msa0307750 | Msa0833790 | 0.807657 | 4.541580e-50 | -8.615850e-47 |
| Msa0317820 | Msa0833790 | 0.802327 | 5.912566e-49 | -8.615850e-47 |
| Msa0329050 | Msa0833790 | 0.828661 | 7.943589e-55 | -8.615850e-47 |
| Msa0518720 | Msa0833790 | 0.810499 | 1.118094e-50 | -8.615850e-47 |
| Msa0522510 | Msa0833790 | 0.811040 | 8.539161e-51 | -8.615850e-47 |
| Msa0527420 | Msa0833790 | 0.810115 | 1.353513e-50 | -8.615850e-47 |
| Msa0549700 | Msa0833790 | 0.803933 | 2.752068e-49 | -8.615850e-47 |
| Msa0552920 | Msa0833790 | 0.824050 | 9.956871e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 47 sgRNAs with CRISPR-Local
Find 464 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTACAAACAAGCTCATTTAA+AGG | 0.172104 | 5_4:+6899481 | Msa0833790:three_prime_UTR |
| GGTGATAATGGTATAATATA+TGG | 0.241626 | 5_4:-6899650 | None:intergenic |
| GCATGTACCTTTATATTTGA+TGG | 0.261955 | 5_4:-6899596 | None:intergenic |
| TCAAAGTTTGTATTGTATCT+AGG | 0.321676 | 5_4:+6899563 | Msa0833790:three_prime_UTR |
| AACAAAATACCATTTCAATA+AGG | 0.346795 | 5_4:+6890369 | Msa0833790:CDS |
| TTAATCCAACCTTATTGAAA+TGG | 0.377715 | 5_4:-6890378 | None:intergenic |
| TTGTATGAATGTCTAGGTTC+AGG | 0.383294 | 5_4:-6890222 | None:intergenic |
| TTGAGTAGTAATGGTGATAA+TGG | 0.383843 | 5_4:-6899662 | None:intergenic |
| TCTTCAACATTGTGCTGAGC+TGG | 0.397887 | 5_4:-6899311 | None:intergenic |
| AAGTAAACCATCAAATATAA+AGG | 0.416876 | 5_4:+6899589 | Msa0833790:three_prime_UTR |
| GAAGGGAAGGCGTACCCGTT+TGG | 0.420806 | 5_4:-6891287 | None:intergenic |
| CATGGTTGTGCAGGCTGAAA+GGG | 0.439466 | 5_4:+6899265 | Msa0833790:intron |
| GTGATAATGGTATAATATAT+GGG | 0.448383 | 5_4:-6899649 | None:intergenic |
| GGGACATGCAAGGTCAATGC+TGG | 0.458452 | 5_4:+6899286 | Msa0833790:CDS |
| TGCAGGGTCAACTTTCCAAA+CGG | 0.463339 | 5_4:+6891272 | Msa0833790:intron |
| TATGTCCTCTGCATTCTCAT+TGG | 0.469408 | 5_4:-6899351 | None:intergenic |
| TAAAATGCAATACAAGAGTA+AGG | 0.477807 | 5_4:-6890253 | None:intergenic |
| ATTAGACAATGTTAAATTGT+CGG | 0.482811 | 5_4:+6890727 | Msa0833790:CDS |
| GCAGGGTCAACTTTCCAAAC+GGG | 0.494200 | 5_4:+6891273 | Msa0833790:intron |
| CAAGGTTTGTATGAATGTCT+AGG | 0.501665 | 5_4:-6890228 | None:intergenic |
| GCCTTCCCTTCTTGCAGCAA+AGG | 0.502277 | 5_4:+6891299 | Msa0833790:CDS |
| ATATTACCTTTGCTGCAAGA+AGG | 0.508485 | 5_4:-6891305 | None:intergenic |
| GCAAAGAACCACAGAGGATG+AGG | 0.512478 | 5_4:-6890309 | None:intergenic |
| AAACATAACTTGAGTAGTAA+TGG | 0.517566 | 5_4:-6899671 | None:intergenic |
| GTTAACTACATTAAGTGTAA+AGG | 0.521339 | 5_4:+6890754 | Msa0833790:CDS |
| ATTCTCATACAACATCCAAA+AGG | 0.541165 | 5_4:-6899521 | None:intergenic |
| AGGATGAGGAGCAGAAGAAG+AGG | 0.541757 | 5_4:-6890295 | None:intergenic |
| ACCTTTGCTGCAAGAAGGGA+AGG | 0.542385 | 5_4:-6891300 | None:intergenic |
| TATTACCTTTGCTGCAAGAA+GGG | 0.546785 | 5_4:-6891304 | None:intergenic |
| AGGATTATGCACAACCTCAT+CGG | 0.565341 | 5_4:+6899378 | Msa0833790:CDS |
| TGTAAAGGATAATAAGCTAG+AGG | 0.587951 | 5_4:+6890769 | Msa0833790:CDS |
| GATAATGGTATAATATATGG+GGG | 0.590897 | 5_4:-6899647 | None:intergenic |
| ACATGGTTGTGCAGGCTGAA+AGG | 0.598698 | 5_4:+6899264 | Msa0833790:intron |
| CTTCTGCTCCTCATCCTCTG+TGG | 0.599025 | 5_4:+6890301 | Msa0833790:CDS |
| TGATAATGGTATAATATATG+GGG | 0.602274 | 5_4:-6899648 | None:intergenic |
| AGGTACATGCAATACTGCAT+TGG | 0.604721 | 5_4:+6899609 | Msa0833790:three_prime_UTR |
| GCACAATGTTGAAGAAACAA+TGG | 0.606943 | 5_4:+6899319 | Msa0833790:CDS |
| CAATACAAGAGTAAGGCTCA+AGG | 0.610585 | 5_4:-6890246 | None:intergenic |
| ATGGTTGTGCAGGCTGAAAG+GGG | 0.610618 | 5_4:+6899266 | Msa0833790:intron |
| GGACATGCAAGGTCAATGCT+GGG | 0.614579 | 5_4:+6899287 | Msa0833790:CDS |
| TGAATAGGTGCTTTCCGATG+AGG | 0.626859 | 5_4:-6899392 | None:intergenic |
| GAATGCAGAGGACATAGTCG+AGG | 0.680802 | 5_4:+6899358 | Msa0833790:CDS |
| ACTTTGAAGAAAGTGATCGT+AGG | 0.682204 | 5_4:+6890863 | Msa0833790:CDS |
| ATAATGGTATAATATATGGG+GGG | 0.694060 | 5_4:-6899646 | None:intergenic |
| AAACACCAATGAGAATGCAG+AGG | 0.695538 | 5_4:+6899346 | Msa0833790:CDS |
| AGGCTGAAAGGGGACATGCA+AGG | 0.696024 | 5_4:+6899276 | Msa0833790:intron |
| ATGCATGCAAAGAACCACAG+AGG | 0.789583 | 5_4:-6890315 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTGTAAAAAAAAAAATTTG+AGG | + | chr5_4:6890502-6890521 | Msa0833790:intron | 10.0% |
| !!! | TTTAAAAAACTTTGTTATAA+AGG | + | chr5_4:6891893-6891912 | Msa0833790:intron | 10.0% |
| !! | ACATATAATTTATAAAATGA+AGG | + | chr5_4:6892683-6892702 | Msa0833790:intron | 10.0% |
| !!! | TTTTTTTTTTAAGAAATCAT+CGG | - | chr5_4:6893686-6893705 | None:intergenic | 10.0% |
| !! | ATTATTTATGTTATTATTTC+AGG | - | chr5_4:6895439-6895458 | None:intergenic | 10.0% |
| !! | ATAAATAATATCAAAATAGT+TGG | + | chr5_4:6895450-6895469 | Msa0833790:intron | 10.0% |
| !! | TTTAATTAAAAGTAAAATTG+TGG | - | chr5_4:6895728-6895747 | None:intergenic | 10.0% |
| !! | GGTAATAAAATTAAATTTAA+CGG | + | chr5_4:6895997-6896016 | Msa0833790:intron | 10.0% |
| !! | TATTTAATTGATATTGTATT+TGG | + | chr5_4:6896218-6896237 | Msa0833790:intron | 10.0% |
| !! | GAAAATAGTTAAAAAAAAAT+AGG | + | chr5_4:6896414-6896433 | Msa0833790:intron | 10.0% |
| !!! | TTTTATTATCTTTTTATCAA+AGG | - | chr5_4:6896686-6896705 | None:intergenic | 10.0% |
| !!! | ATTTATATACATTGTTTTTA+GGG | - | chr5_4:6897357-6897376 | None:intergenic | 10.0% |
| !!! | AATTTATATACATTGTTTTT+AGG | - | chr5_4:6897358-6897377 | None:intergenic | 10.0% |
| !! | AAAAAAATATTAAAAATGCT+AGG | - | chr5_4:6898677-6898696 | None:intergenic | 10.0% |
| !!! | ATAGTATATCTTTTTTTTTT+AGG | + | chr5_4:6898773-6898792 | Msa0833790:intron | 10.0% |
| !!! | TAGTATATCTTTTTTTTTTA+GGG | + | chr5_4:6898774-6898793 | Msa0833790:intron | 10.0% |
| !! | CATGTTAATATTAATATTAA+AGG | + | chr5_4:6899005-6899024 | Msa0833790:intron | 10.0% |
| !! | TAGATAGTTATAAACTTATA+AGG | - | chr5_4:6890415-6890434 | None:intergenic | 15.0% |
| !! | TAAAATTTGTGATTATATTC+AGG | + | chr5_4:6890703-6890722 | Msa0833790:intron | 15.0% |
| !! | TTATTACTAAATTATTGCTA+AGG | + | chr5_4:6891108-6891127 | Msa0833790:intron | 15.0% |
| !! | TTACAATAAGCATAAATTAT+TGG | - | chr5_4:6891187-6891206 | None:intergenic | 15.0% |
| !! | AAAAAAATAGAATATTCAAG+AGG | + | chr5_4:6891562-6891581 | Msa0833790:intron | 15.0% |
| !! | TAAAAAAAATGAAATCCAAA+AGG | - | chr5_4:6891665-6891684 | None:intergenic | 15.0% |
| !! | TCAAAAAAGATTGAAATTAA+AGG | + | chr5_4:6891688-6891707 | Msa0833790:intron | 15.0% |
| !! | TATCATGTTAATTATAATGT+TGG | - | chr5_4:6892108-6892127 | None:intergenic | 15.0% |
| !! | ATAATTAACATGATACTAAT+TGG | + | chr5_4:6892113-6892132 | Msa0833790:intron | 15.0% |
| !!! | ATTTTGTTTGATGTAAATAT+TGG | - | chr5_4:6892240-6892259 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTAAGAAATCATC+GGG | - | chr5_4:6893685-6893704 | None:intergenic | 15.0% |
| !!! | TTTGTTTTTTTAATTGTTAG+TGG | - | chr5_4:6894739-6894758 | None:intergenic | 15.0% |
| !!! | TTTTTAAGTTAAATGTTGTT+TGG | + | chr5_4:6895087-6895106 | Msa0833790:intron | 15.0% |
| !!! | ATGTTTAAAATATTTTCTGA+AGG | + | chr5_4:6895267-6895286 | Msa0833790:intron | 15.0% |
| !!! | ATAAAATTCCTTTGAAAAAA+AGG | + | chr5_4:6895976-6895995 | Msa0833790:intron | 15.0% |
| !!! | TTTTATTACCTTTTTTTCAA+AGG | - | chr5_4:6895987-6896006 | None:intergenic | 15.0% |
| !!! | TTTTAATGCATAAAATTGAA+TGG | - | chr5_4:6896178-6896197 | None:intergenic | 15.0% |
| !!! | AATTTATTCCATTCAATTTT+AGG | + | chr5_4:6896922-6896941 | Msa0833790:intron | 15.0% |
| !! | AATAATAGTAGTAAATGATT+GGG | - | chr5_4:6897698-6897717 | None:intergenic | 15.0% |
| !! | AAATAATAGTAGTAAATGAT+TGG | - | chr5_4:6897699-6897718 | None:intergenic | 15.0% |
| !!! | TTAATCAATTTTTCTTGTTA+AGG | + | chr5_4:6897770-6897789 | Msa0833790:intron | 15.0% |
| !! | TAATATTAACATGATTCAAT+GGG | - | chr5_4:6898998-6899017 | None:intergenic | 15.0% |
| !! | TTAATATTAACATGATTCAA+TGG | - | chr5_4:6898999-6899018 | None:intergenic | 15.0% |
| !! | AACAAAATACCATTTCAATA+AGG | + | chr5_4:6890369-6890388 | Msa0833790:CDS | 20.0% |
| !!! | ATCCTTCTATCTATTTTTTT+CGG | + | chr5_4:6890450-6890469 | Msa0833790:intron | 20.0% |
| !! | ATTAGACAATGTTAAATTGT+CGG | + | chr5_4:6890727-6890746 | Msa0833790:CDS | 20.0% |
| !! | TTTATTTGCATAGAAAACAA+AGG | - | chr5_4:6891026-6891045 | None:intergenic | 20.0% |
| !!! | ATTGTTTAGAAATTTTGCAT+TGG | + | chr5_4:6891151-6891170 | Msa0833790:intron | 20.0% |
| !! | TATATCTCCACATTATATAT+AGG | + | chr5_4:6891474-6891493 | Msa0833790:intron | 20.0% |
| !! | ATATCTCCACATTATATATA+GGG | + | chr5_4:6891475-6891494 | Msa0833790:intron | 20.0% |
| !! | TTGAATGAAACAAAAAAAAG+AGG | + | chr5_4:6891508-6891527 | Msa0833790:intron | 20.0% |
| !! | GTAACTAGTTATTTAGAAAA+TGG | - | chr5_4:6891752-6891771 | None:intergenic | 20.0% |
| !! | TTGTAAAAATATTGTTCCAA+AGG | + | chr5_4:6891806-6891825 | Msa0833790:intron | 20.0% |
| !!! | TAATTTACTCATTTTTCCTT+TGG | - | chr5_4:6891825-6891844 | None:intergenic | 20.0% |
| !!! | ATTTTTCTAAGAAATTGTTG+CGG | + | chr5_4:6891946-6891965 | Msa0833790:intron | 20.0% |
| !! | AGCAAATCTTTATAATGTTT+AGG | - | chr5_4:6892042-6892061 | None:intergenic | 20.0% |
| !! | ATTAACGTTACATAATAGTT+AGG | + | chr5_4:6892164-6892183 | Msa0833790:intron | 20.0% |
| !!! | TATTTGAACTTCTACTATTT+TGG | - | chr5_4:6892327-6892346 | None:intergenic | 20.0% |
| !!! | TTTGTTTCAACAATTTTAAC+TGG | - | chr5_4:6892825-6892844 | None:intergenic | 20.0% |
| !! | CTTGACTAAGTTTATAAATT+CGG | + | chr5_4:6893099-6893118 | Msa0833790:intron | 20.0% |
| !! | ACCAATTGTTACATATATTT+AGG | + | chr5_4:6893402-6893421 | Msa0833790:intron | 20.0% |
| !! | ACCTAAATATATGTAACAAT+TGG | - | chr5_4:6893406-6893425 | None:intergenic | 20.0% |
| !! | AAATTGTGTTGAAAGATAAA+AGG | - | chr5_4:6893617-6893636 | None:intergenic | 20.0% |
| !! | ATTTCACTTTAAGTCATTTA+AGG | - | chr5_4:6893812-6893831 | None:intergenic | 20.0% |
| !! | GTAACATTGATAAATCATAA+AGG | + | chr5_4:6894084-6894103 | Msa0833790:intron | 20.0% |
| !! | GTATTATTGTATTTCCATAT+AGG | - | chr5_4:6894291-6894310 | None:intergenic | 20.0% |
| !!! | GACTTGTTAAATATTTGAAT+AGG | + | chr5_4:6895396-6895415 | Msa0833790:intron | 20.0% |
| !! | TTATAAGAATACCATATTTC+TGG | + | chr5_4:6895510-6895529 | Msa0833790:intron | 20.0% |
| !! | TATTATATTTGGTACATTGT+TGG | + | chr5_4:6895568-6895587 | Msa0833790:intron | 20.0% |
| !!! | AACAGATATGTTTAGTTTTT+TGG | + | chr5_4:6895600-6895619 | Msa0833790:intron | 20.0% |
| !!! | CATAGTTTGTTACAATATAA+AGG | + | chr5_4:6895640-6895659 | Msa0833790:intron | 20.0% |
| !! | CGGTTCAAAAAAAAATTAAA+TGG | + | chr5_4:6896017-6896036 | Msa0833790:intron | 20.0% |
| !! | TAGTTAAAAAAAAATAGGTG+AGG | + | chr5_4:6896419-6896438 | Msa0833790:intron | 20.0% |
| !!! | TAATTTTTTTTAGTGTTGCT+TGG | - | chr5_4:6896455-6896474 | None:intergenic | 20.0% |
| !! | CGTTAATAAAAATATTTGTG+AGG | + | chr5_4:6896601-6896620 | Msa0833790:intron | 20.0% |
| !! | AACCTCCTTAAAAAATTAAA+TGG | + | chr5_4:6896714-6896733 | Msa0833790:intron | 20.0% |
| !!! | TTCCATTTAATTTTTTAAGG+AGG | - | chr5_4:6896719-6896738 | None:intergenic | 20.0% |
| !! | CCTTAAAAAATTAAATGGAA+CGG | + | chr5_4:6896719-6896738 | Msa0833790:intron | 20.0% |
| !! | ATTGAATGGAATAAATTGAA+TGG | - | chr5_4:6896919-6896938 | None:intergenic | 20.0% |
| !! | AAAAGAAAATAATTTGGATG+AGG | + | chr5_4:6897168-6897187 | Msa0833790:intron | 20.0% |
| !! | TTGATCAATAATGATATCAT+CGG | - | chr5_4:6897829-6897848 | None:intergenic | 20.0% |
| !! | AAAAAAAATGAAGGAGTAAA+TGG | - | chr5_4:6898232-6898251 | None:intergenic | 20.0% |
| !! | CTATGTATAACGAATTATAA+CGG | + | chr5_4:6898518-6898537 | Msa0833790:intron | 20.0% |
| !!! | TGTTAATTTTGATTGGTTTA+TGG | + | chr5_4:6898893-6898912 | Msa0833790:intron | 20.0% |
| !!! | GTTAATTTTGATTGGTTTAT+GGG | + | chr5_4:6898894-6898913 | Msa0833790:intron | 20.0% |
| !!! | TTTTTAGTAAGTTATTGCAA+AGG | - | chr5_4:6898963-6898982 | None:intergenic | 20.0% |
| !! | AATATTAACATGATTCAATG+GGG | - | chr5_4:6898997-6899016 | None:intergenic | 20.0% |
| !! | AAACTCCAAAAAAATTAACA+TGG | + | chr5_4:6899112-6899131 | Msa0833790:intron | 20.0% |
| !! | ATATATATATACGTGTTTGT+TGG | + | chr5_4:6899205-6899224 | Msa0833790:intron | 20.0% |
| !! | AAGTAAACCATCAAATATAA+AGG | + | chr5_4:6899589-6899608 | Msa0833790:three_prime_UTR | 20.0% |
| !!! | TGATAATGGTATAATATATG+GGG | - | chr5_4:6899651-6899670 | None:intergenic | 20.0% |
| !!! | GTGATAATGGTATAATATAT+GGG | - | chr5_4:6899652-6899671 | None:intergenic | 20.0% |
| ! | TAAAATGCAATACAAGAGTA+AGG | - | chr5_4:6890256-6890275 | None:intergenic | 25.0% |
| !! | TATTGCATTTTATCTCAACA+TGG | + | chr5_4:6890264-6890283 | Msa0833790:exon | 25.0% |
| ! | AAATACCATTTCAATAAGGT+TGG | + | chr5_4:6890373-6890392 | Msa0833790:intron | 25.0% |
| ! | TTAATCCAACCTTATTGAAA+TGG | - | chr5_4:6890381-6890400 | None:intergenic | 25.0% |
| ! | AAATTTGAGGAAAAAATTGC+AGG | + | chr5_4:6890515-6890534 | Msa0833790:intron | 25.0% |
| !!! | TTCATATACTCATTTTTCAG+TGG | - | chr5_4:6890559-6890578 | None:intergenic | 25.0% |
| ! | GTTAACTACATTAAGTGTAA+AGG | + | chr5_4:6890754-6890773 | Msa0833790:CDS | 25.0% |
| ! | AAATAGAATATTCAAGAGGT+TGG | + | chr5_4:6891566-6891585 | Msa0833790:intron | 25.0% |
| ! | GCATTATAAACATAAACACA+AGG | + | chr5_4:6891635-6891654 | Msa0833790:intron | 25.0% |
| ! | TTATTTAGAAAATGGATACG+TGG | - | chr5_4:6891744-6891763 | None:intergenic | 25.0% |
| ! | TAATGAATATTGCACAAACT+CGG | + | chr5_4:6891843-6891862 | Msa0833790:intron | 25.0% |
| ! | AAGGAGAAATGAACAAATTA+AGG | + | chr5_4:6891912-6891931 | Msa0833790:intron | 25.0% |
| ! | AGGAGAAATGAACAAATTAA+GGG | + | chr5_4:6891913-6891932 | Msa0833790:intron | 25.0% |
| !!! | ACATTATAAAGATTTGCTGT+AGG | + | chr5_4:6892044-6892063 | Msa0833790:intron | 25.0% |
| ! | TGTCATAGAATAACCAAAAA+GGG | + | chr5_4:6892207-6892226 | Msa0833790:intron | 25.0% |
| ! | TAGTCTAATGCATATTAACA+TGG | + | chr5_4:6892637-6892656 | Msa0833790:intron | 25.0% |
| ! | AGACTTTATAGGAAGATAAT+AGG | - | chr5_4:6892763-6892782 | None:intergenic | 25.0% |
| ! | TGCATTTATCTAGACTTTAT+AGG | - | chr5_4:6892774-6892793 | None:intergenic | 25.0% |
| ! | CGAATTTATAAACTTAGTCA+AGG | - | chr5_4:6893101-6893120 | None:intergenic | 25.0% |
| ! | AAGTTTATAAATTCGGCAAT+TGG | + | chr5_4:6893106-6893125 | Msa0833790:intron | 25.0% |
| ! | AATATATGTAACAATTGGTC+AGG | - | chr5_4:6893401-6893420 | None:intergenic | 25.0% |
| ! | TATGATTGATGTTACACTAT+GGG | - | chr5_4:6893504-6893523 | None:intergenic | 25.0% |
| ! | ATATGATTGATGTTACACTA+TGG | - | chr5_4:6893505-6893524 | None:intergenic | 25.0% |
| ! | CATAAGAAAATACATCTTTC+AGG | + | chr5_4:6893533-6893552 | Msa0833790:intron | 25.0% |
| !! | TTCAAAACTGACGTTTTATA+TGG | - | chr5_4:6893772-6893791 | None:intergenic | 25.0% |
| ! | TCATTTAAGGAAATTCAAGA+TGG | - | chr5_4:6893799-6893818 | None:intergenic | 25.0% |
| !!! | TTTAAGGTTGTTTTTGGTTA+TGG | - | chr5_4:6893883-6893902 | None:intergenic | 25.0% |
| ! | ATAACCAAAAACAACCTTAA+AGG | + | chr5_4:6893882-6893901 | Msa0833790:intron | 25.0% |
| ! | TAACCAAAAACAACCTTAAA+GGG | + | chr5_4:6893883-6893902 | Msa0833790:intron | 25.0% |
| ! | AATAACTCGATATAGAGAAT+TGG | - | chr5_4:6893992-6894011 | None:intergenic | 25.0% |
| !!! | GCTCATTATTTTTTATGCAA+AGG | - | chr5_4:6894142-6894161 | None:intergenic | 25.0% |
| !! | TCAAAAATGATTTGGACATT+TGG | - | chr5_4:6894230-6894249 | None:intergenic | 25.0% |
| ! | TAAGGATCTCAAAAATGATT+TGG | - | chr5_4:6894238-6894257 | None:intergenic | 25.0% |
| !! | AAATTTGTGCATTTAAGATC+AGG | - | chr5_4:6894402-6894421 | None:intergenic | 25.0% |
| !!! | TTGAATTTTAGCTTATGGTA+AGG | - | chr5_4:6894634-6894653 | None:intergenic | 25.0% |
| !!! | GATGATTGAATTTTAGCTTA+TGG | - | chr5_4:6894639-6894658 | None:intergenic | 25.0% |
| !! | AAAAATCTTCCTTTGTTATG+TGG | - | chr5_4:6894679-6894698 | None:intergenic | 25.0% |
| !!! | TTTAGTTTTTGCTTCATCAT+GGG | - | chr5_4:6894810-6894829 | None:intergenic | 25.0% |
| !!! | TTTTAGTTTTTGCTTCATCA+TGG | - | chr5_4:6894811-6894830 | None:intergenic | 25.0% |
| !!! | TCATTTTCTTCCATTTTTCA+TGG | - | chr5_4:6894901-6894920 | None:intergenic | 25.0% |
| ! | CTAAAAGTTAATTCAAACCA+AGG | + | chr5_4:6894995-6895014 | Msa0833790:intron | 25.0% |
| ! | TCAAACCAAGGTTAAAATAA+AGG | + | chr5_4:6895007-6895026 | Msa0833790:intron | 25.0% |
| !! | AACTTTAGCTTCTTTCTTAA+AGG | - | chr5_4:6895033-6895052 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTTTTACGGTGTC+CGG | + | chr5_4:6895134-6895153 | Msa0833790:intron | 25.0% |
| ! | TGAATAGGAGAAACAATTTA+AGG | + | chr5_4:6895411-6895430 | Msa0833790:intron | 25.0% |
| !! | TTTTAATGACACCAGAAATA+TGG | - | chr5_4:6895524-6895543 | None:intergenic | 25.0% |
| !! | GATGTCTTTTCTTCAAAAAA+AGG | - | chr5_4:6895706-6895725 | None:intergenic | 25.0% |
| !!! | CTAATGCGTATCATTTTTTT+TGG | - | chr5_4:6895791-6895810 | None:intergenic | 25.0% |
| ! | CTGAATTTGAGAGAAAAAAT+TGG | + | chr5_4:6896330-6896349 | Msa0833790:intron | 25.0% |
| !!! | CCGTTCCATTTAATTTTTTA+AGG | - | chr5_4:6896722-6896741 | None:intergenic | 25.0% |
| !! | AAGTAACATTCAACAACTTT+TGG | + | chr5_4:6896881-6896900 | Msa0833790:intron | 25.0% |
| !! | TTTTAACGCCTAAAATTGAA+TGG | - | chr5_4:6896933-6896952 | None:intergenic | 25.0% |
| !!! | TACATTTTTAAGGAGAAGTT+AGG | - | chr5_4:6896999-6897018 | None:intergenic | 25.0% |
| !! | TCAACTTCTCTACATTTTTA+AGG | - | chr5_4:6897009-6897028 | None:intergenic | 25.0% |
| !! | ACAAAATAGAGGATTTTCAA+TGG | - | chr5_4:6897560-6897579 | None:intergenic | 25.0% |
| ! | TGTTACACAAAATAACCAAA+AGG | - | chr5_4:6897597-6897616 | None:intergenic | 25.0% |
| !!! | TTTGGTTATTTTGTGTAACA+AGG | + | chr5_4:6897597-6897616 | Msa0833790:intron | 25.0% |
| ! | GAACTAAAAAATTGTATTGG+AGG | - | chr5_4:6898131-6898150 | None:intergenic | 25.0% |
| ! | AGGGAACTAAAAAATTGTAT+TGG | - | chr5_4:6898134-6898153 | None:intergenic | 25.0% |
| ! | AAAAAGAGCAATTCATCTTA+TGG | + | chr5_4:6898400-6898419 | Msa0833790:intron | 25.0% |
| ! | GCACATGTATAATAAATCAT+TGG | + | chr5_4:6898458-6898477 | Msa0833790:intron | 25.0% |
| ! | TCAAAATGTTAACCTTGATT+TGG | + | chr5_4:6898484-6898503 | Msa0833790:intron | 25.0% |
| !! | CAAATGTGATGTTTTACTAT+AGG | + | chr5_4:6898718-6898737 | Msa0833790:intron | 25.0% |
| ! | CTATCCATTATTCTTCAAAA+GGG | - | chr5_4:6898757-6898776 | None:intergenic | 25.0% |
| ! | ACTATCCATTATTCTTCAAA+AGG | - | chr5_4:6898758-6898777 | None:intergenic | 25.0% |
| ! | TATTAATATTAAAGGCCACA+TGG | + | chr5_4:6899013-6899032 | Msa0833790:intron | 25.0% |
| !!! | TCACACCATGTTAATTTTTT+TGG | - | chr5_4:6899120-6899139 | None:intergenic | 25.0% |
| ! | TTACAAACAAGCTCATTTAA+AGG | + | chr5_4:6899481-6899500 | Msa0833790:three_prime_UTR | 25.0% |
| !!! | CTTTATTAGTTTTAGCCTTT+TGG | + | chr5_4:6899506-6899525 | Msa0833790:three_prime_UTR | 25.0% |
| ! | TCAAAGTTTGTATTGTATCT+AGG | + | chr5_4:6899563-6899582 | Msa0833790:three_prime_UTR | 25.0% |
| ! | ATAATGGTATAATATATGGG+GGG | - | chr5_4:6899649-6899668 | None:intergenic | 25.0% |
| !! | GATAATGGTATAATATATGG+GGG | - | chr5_4:6899650-6899669 | None:intergenic | 25.0% |
| !!! | GGTGATAATGGTATAATATA+TGG | - | chr5_4:6899653-6899672 | None:intergenic | 25.0% |
| GACCGAAAAAAATAGATAGA+AGG | - | chr5_4:6890455-6890474 | None:intergenic | 30.0% | |
| ! | CTACGTGCAATTTTGTAATT+TGG | - | chr5_4:6890481-6890500 | None:intergenic | 30.0% |
| TGTAAAGGATAATAAGCTAG+AGG | + | chr5_4:6890769-6890788 | Msa0833790:CDS | 30.0% | |
| CAACTAACAACAATCAACAA+GGG | - | chr5_4:6890906-6890925 | None:intergenic | 30.0% | |
| ACAACTAACAACAATCAACA+AGG | - | chr5_4:6890907-6890926 | None:intergenic | 30.0% | |
| ! | ATCTGACTTTTGTTAATGTG+AGG | + | chr5_4:6891046-6891065 | Msa0833790:intron | 30.0% |
| TGAGGTTCATACATAATCTA+TGG | + | chr5_4:6891064-6891083 | Msa0833790:intron | 30.0% | |
| TACATAATCTATGGTGTACT+TGG | + | chr5_4:6891073-6891092 | Msa0833790:intron | 30.0% | |
| !! | TTTAGAAATTTTGCATTGGC+TGG | + | chr5_4:6891155-6891174 | Msa0833790:intron | 30.0% |
| ATCTCACCCTATATATAATG+TGG | - | chr5_4:6891484-6891503 | None:intergenic | 30.0% | |
| ! | TAAACACAAGGAATACCTTT+TGG | + | chr5_4:6891647-6891666 | Msa0833790:intron | 30.0% |
| ATACTAATTGGAACCAATGA+AGG | + | chr5_4:6892125-6892144 | Msa0833790:intron | 30.0% | |
| AACGTTAATCTGCATATTGT+TGG | - | chr5_4:6892153-6892172 | None:intergenic | 30.0% | |
| GTGTCATAGAATAACCAAAA+AGG | + | chr5_4:6892206-6892225 | Msa0833790:intron | 30.0% | |
| ! | TATTGGCAAAAATCCCTTTT+TGG | - | chr5_4:6892223-6892242 | None:intergenic | 30.0% |
| TCGTAAACAATCTTGACTTT+GGG | - | chr5_4:6892284-6892303 | None:intergenic | 30.0% | |
| ATCGTAAACAATCTTGACTT+TGG | - | chr5_4:6892285-6892304 | None:intergenic | 30.0% | |
| TAGAAGTTCAAATAGTTCAG+CGG | + | chr5_4:6892333-6892352 | Msa0833790:intron | 30.0% | |
| GGAAGCTATGAAAAATACTT+GGG | - | chr5_4:6892478-6892497 | None:intergenic | 30.0% | |
| AGGAAGCTATGAAAAATACT+TGG | - | chr5_4:6892479-6892498 | None:intergenic | 30.0% | |
| ATTGTTCTTGATATCTCGTT+TGG | + | chr5_4:6892583-6892602 | Msa0833790:intron | 30.0% | |
| TTGTTCTTGATATCTCGTTT+GGG | + | chr5_4:6892584-6892603 | Msa0833790:intron | 30.0% | |
| GGAAGATAAATTAGAAGACA+TGG | - | chr5_4:6892742-6892761 | None:intergenic | 30.0% | |
| !!! | AACAATTTTAACTGGTCAAC+GGG | - | chr5_4:6892817-6892836 | None:intergenic | 30.0% |
| !!! | CAACAATTTTAACTGGTCAA+CGG | - | chr5_4:6892818-6892837 | None:intergenic | 30.0% |
| AAATTCAATCCTAACCAGTT+TGG | - | chr5_4:6892942-6892961 | None:intergenic | 30.0% | |
| ATACATACTGCATCACTATT+TGG | - | chr5_4:6892974-6892993 | None:intergenic | 30.0% | |
| ! | TCATGTGCATAATTTGTGTT+AGG | - | chr5_4:6892997-6893016 | None:intergenic | 30.0% |
| CGACAACAATTCAAGAAATA+TGG | + | chr5_4:6893244-6893263 | Msa0833790:intron | 30.0% | |
| ! | GTCTTAAACTTTTCAACAAC+CGG | + | chr5_4:6893347-6893366 | Msa0833790:intron | 30.0% |
| AAGAACTCAAGGTAAATAGA+TGG | + | chr5_4:6893451-6893470 | Msa0833790:intron | 30.0% | |
| ! | GATGTATTTTCTTATGCAGT+GGG | - | chr5_4:6893529-6893548 | None:intergenic | 30.0% |
| ! | AGATGTATTTTCTTATGCAG+TGG | - | chr5_4:6893530-6893549 | None:intergenic | 30.0% |
| !!! | TGTTTTTGGTTATGGTACAA+AGG | - | chr5_4:6893875-6893894 | None:intergenic | 30.0% |
| !!! | AATCCCTTTAAGGTTGTTTT+TGG | - | chr5_4:6893889-6893908 | None:intergenic | 30.0% |
| CATTGCATTTAATCCCTTTA+AGG | - | chr5_4:6893899-6893918 | None:intergenic | 30.0% | |
| TGGTTTCTTTCTCGAATTTA+AGG | - | chr5_4:6894030-6894049 | None:intergenic | 30.0% | |
| GACATTTGGAAAATAGGATT+TGG | - | chr5_4:6894216-6894235 | None:intergenic | 30.0% | |
| GATTTGGACATTTGGAAAAT+AGG | - | chr5_4:6894222-6894241 | None:intergenic | 30.0% | |
| TATAGGACTTTCAATGTCAA+GGG | - | chr5_4:6894274-6894293 | None:intergenic | 30.0% | |
| ATATAGGACTTTCAATGTCA+AGG | - | chr5_4:6894275-6894294 | None:intergenic | 30.0% | |
| TTGACATTGAAAGTCCTATA+TGG | + | chr5_4:6894274-6894293 | Msa0833790:intron | 30.0% | |
| TTTCCGTATCATCAACTTTA+TGG | + | chr5_4:6894419-6894438 | Msa0833790:intron | 30.0% | |
| !!! | TTGTTTTAGTCACATCATTG+AGG | - | chr5_4:6894446-6894465 | None:intergenic | 30.0% |
| ! | GCTGTAACAGTTTTCATATT+TGG | - | chr5_4:6894519-6894538 | None:intergenic | 30.0% |
| ATGAAAACTGTTACAGCTTT+AGG | + | chr5_4:6894522-6894541 | Msa0833790:intron | 30.0% | |
| !! | ACAATTGTTATTTCAGCTTC+TGG | - | chr5_4:6894604-6894623 | None:intergenic | 30.0% |
| TACTATACTCCACATAACAA+AGG | + | chr5_4:6894667-6894686 | Msa0833790:intron | 30.0% | |
| ! | ACAAAGGAAGATTTTTCTAC+AGG | + | chr5_4:6894683-6894702 | Msa0833790:intron | 30.0% |
| ! | TTCACGATTCTGCATTTTAA+GGG | - | chr5_4:6894770-6894789 | None:intergenic | 30.0% |
| ! | TTTCACGATTCTGCATTTTA+AGG | - | chr5_4:6894771-6894790 | None:intergenic | 30.0% |
| !!! | CTTGAGTTGACTGATTTTTA+TGG | - | chr5_4:6894860-6894879 | None:intergenic | 30.0% |
| AACGGTATCTAAGTTTAACT+GGG | - | chr5_4:6894955-6894974 | None:intergenic | 30.0% | |
| AAACGGTATCTAAGTTTAAC+TGG | - | chr5_4:6894956-6894975 | None:intergenic | 30.0% | |
| AGTTAAACTTAGATACCGTT+TGG | + | chr5_4:6894955-6894974 | Msa0833790:intron | 30.0% | |
| ! | TTTTAGACCGTAAAAAACCT+TGG | - | chr5_4:6894981-6895000 | None:intergenic | 30.0% |
| !!! | AAAGGCCTTTATTTTAACCT+TGG | - | chr5_4:6895015-6895034 | None:intergenic | 30.0% |
| AGAAAGAAGCTAAAGTTGTT+TGG | + | chr5_4:6895036-6895055 | Msa0833790:intron | 30.0% | |
| !!! | TTTTTTTTTTTACGGTGTCC+GGG | + | chr5_4:6895135-6895154 | Msa0833790:intron | 30.0% |
| CGTGGATAAAAATATTTGTG+AGG | + | chr5_4:6895902-6895921 | Msa0833790:intron | 30.0% | |
| ! | AAGTAGCATTCAACAACTTT+TGG | + | chr5_4:6896140-6896159 | Msa0833790:intron | 30.0% |
| AAATTGAATGGAATGAGCTT+TGG | - | chr5_4:6896166-6896185 | None:intergenic | 30.0% | |
| TAGAGAAGTTGAAAAAAAGC+CGG | + | chr5_4:6897017-6897036 | Msa0833790:intron | 30.0% | |
| ATTCAGTTACTTCTACATTG+CGG | - | chr5_4:6897070-6897089 | None:intergenic | 30.0% | |
| AGAAAATAATTTGGATGAGG+TGG | + | chr5_4:6897171-6897190 | Msa0833790:intron | 30.0% | |
| ATTCCATATTTCCTTAACCT+TGG | - | chr5_4:6897203-6897222 | None:intergenic | 30.0% | |
| ATCAATAATGATATCATCGG+TGG | - | chr5_4:6897826-6897845 | None:intergenic | 30.0% | |
| !!! | TTTTTTAGTTCCCTCAAATG+AGG | + | chr5_4:6898140-6898159 | Msa0833790:intron | 30.0% |
| AAGGCTTGGAAAAAAAATGA+AGG | - | chr5_4:6898241-6898260 | None:intergenic | 30.0% | |
| AAATCCTTTGAATCATGTAG+AGG | + | chr5_4:6898297-6898316 | Msa0833790:intron | 30.0% | |
| TATACCTCTACATGATTCAA+AGG | - | chr5_4:6898304-6898323 | None:intergenic | 30.0% | |
| ! | TTTGAATCATGTAGAGGTAT+AGG | + | chr5_4:6898303-6898322 | Msa0833790:intron | 30.0% |
| ! | GATTTGATTTCTCCAAATCA+AGG | - | chr5_4:6898499-6898518 | None:intergenic | 30.0% |
| AACCTCTCAAAAAGATTCTA+CGG | + | chr5_4:6898646-6898665 | Msa0833790:intron | 30.0% | |
| !! | GATTCCCTTTTGAAGAATAA+TGG | + | chr5_4:6898750-6898769 | Msa0833790:intron | 30.0% |
| !! | ACTCGTGTGTTAATTTTGAT+TGG | + | chr5_4:6898886-6898905 | Msa0833790:intron | 30.0% |
| ! | CAATTTGAAATGAAACCATG+TGG | - | chr5_4:6899031-6899050 | None:intergenic | 30.0% |
| ATTCTCATACAACATCCAAA+AGG | - | chr5_4:6899524-6899543 | None:intergenic | 30.0% | |
| GCATGTACCTTTATATTTGA+TGG | - | chr5_4:6899599-6899618 | None:intergenic | 30.0% | |
| TTGAGTAGTAATGGTGATAA+TGG | - | chr5_4:6899665-6899684 | None:intergenic | 30.0% | |
| TTGTATGAATGTCTAGGTTC+AGG | - | chr5_4:6890225-6890244 | None:intergenic | 35.0% | |
| CAAGGTTTGTATGAATGTCT+AGG | - | chr5_4:6890231-6890250 | None:intergenic | 35.0% | |
| !!! | GTTGTGTCTTTTTCAGTAAG+AGG | - | chr5_4:6890352-6890371 | None:intergenic | 35.0% |
| ! | ACTTTGAAGAAAGTGATCGT+AGG | + | chr5_4:6890863-6890882 | Msa0833790:CDS | 35.0% |
| GCAAGGGACAAAAAATTATG+GGG | - | chr5_4:6891004-6891023 | None:intergenic | 35.0% | |
| GGCAAGGGACAAAAAATTAT+GGG | - | chr5_4:6891005-6891024 | None:intergenic | 35.0% | |
| AGGCAAGGGACAAAAAATTA+TGG | - | chr5_4:6891006-6891025 | None:intergenic | 35.0% | |
| TGCATAGAAAACAAAGGCAA+GGG | - | chr5_4:6891020-6891039 | None:intergenic | 35.0% | |
| TTGCATAGAAAACAAAGGCA+AGG | - | chr5_4:6891021-6891040 | None:intergenic | 35.0% | |
| TGAGTCGATATTCAATTGCA+GGG | + | chr5_4:6891256-6891275 | Msa0833790:intron | 35.0% | |
| TATTACCTTTGCTGCAAGAA+GGG | - | chr5_4:6891307-6891326 | None:intergenic | 35.0% | |
| ATATTACCTTTGCTGCAAGA+AGG | - | chr5_4:6891308-6891327 | None:intergenic | 35.0% | |
| !! | GAATATTCAAGAGGTTGGTA+AGG | + | chr5_4:6891571-6891590 | Msa0833790:intron | 35.0% |
| !!! | AGTGAGCTGACTTGAAATTT+TGG | + | chr5_4:6891613-6891632 | Msa0833790:intron | 35.0% |
| !! | CATATTGTTGGTTCCTTCAT+TGG | - | chr5_4:6892141-6892160 | None:intergenic | 35.0% |
| TTTATGCAGAGAACGTATGA+TGG | - | chr5_4:6892440-6892459 | None:intergenic | 35.0% | |
| GCTATGAAAAATACTTGGGT+GGG | - | chr5_4:6892474-6892493 | None:intergenic | 35.0% | |
| AGCTATGAAAAATACTTGGG+TGG | - | chr5_4:6892475-6892494 | None:intergenic | 35.0% | |
| TCTAGATAAATGCATGCATG+TGG | + | chr5_4:6892780-6892799 | Msa0833790:intron | 35.0% | |
| !!! | ACAATTTTAACTGGTCAACG+GGG | - | chr5_4:6892816-6892835 | None:intergenic | 35.0% |
| TCGAAGACATCAATGTCAAA+TGG | - | chr5_4:6892891-6892910 | None:intergenic | 35.0% | |
| CATTGATGTCTTCGAACATT+TGG | + | chr5_4:6892896-6892915 | Msa0833790:intron | 35.0% | |
| TCTCATAATACCATCCAAAC+TGG | + | chr5_4:6892925-6892944 | Msa0833790:intron | 35.0% | |
| TAATACCATCCAAACTGGTT+AGG | + | chr5_4:6892930-6892949 | Msa0833790:intron | 35.0% | |
| TTTCCAATCTGTCTCAAGTT+AGG | - | chr5_4:6893132-6893151 | None:intergenic | 35.0% | |
| ! | GGTTGTCATTGACTACAAAA+TGG | + | chr5_4:6893423-6893442 | Msa0833790:intron | 35.0% |
| AAATGGAAGCAAAGAACTCA+AGG | + | chr5_4:6893440-6893459 | Msa0833790:intron | 35.0% | |
| ATTTGTCAGCATCAGATGAT+AGG | - | chr5_4:6893582-6893601 | None:intergenic | 35.0% | |
| AATTTCTTTCCAGTCCCAAT+TGG | + | chr5_4:6893632-6893651 | Msa0833790:intron | 35.0% | |
| TTGTCAAGACAATGCCAATT+GGG | - | chr5_4:6893649-6893668 | None:intergenic | 35.0% | |
| ATTGTCAAGACAATGCCAAT+TGG | - | chr5_4:6893650-6893669 | None:intergenic | 35.0% | |
| AAATCATCGGGTTTCTTCAT+GGG | - | chr5_4:6893673-6893692 | None:intergenic | 35.0% | |
| GATATAGAGAATTGGAGCAT+TGG | - | chr5_4:6893984-6894003 | None:intergenic | 35.0% | |
| GAAAATAGGATTTGGACTGT+TGG | - | chr5_4:6894208-6894227 | None:intergenic | 35.0% | |
| AAGGGTCTATGACTACATTA+AGG | - | chr5_4:6894256-6894275 | None:intergenic | 35.0% | |
| !! | GGTCCATAAAGTTGATGATA+CGG | - | chr5_4:6894425-6894444 | None:intergenic | 35.0% |
| TACACCAATCAACTTTCGTA+CGG | + | chr5_4:6894469-6894488 | Msa0833790:intron | 35.0% | |
| TGTTATGTGGAGTATAGTAG+AGG | - | chr5_4:6894666-6894685 | None:intergenic | 35.0% | |
| GCATGCAACATAACAATTTC+TGG | + | chr5_4:6894705-6894724 | Msa0833790:intron | 35.0% | |
| !! | TGACTGATTTTTATGGCTTG+AGG | - | chr5_4:6894853-6894872 | None:intergenic | 35.0% |
| ATAAATATACGCCAAGTTCG+GGG | - | chr5_4:6895168-6895187 | None:intergenic | 35.0% | |
| CATAAATATACGCCAAGTTC+GGG | - | chr5_4:6895169-6895188 | None:intergenic | 35.0% | |
| GCATAAATATACGCCAAGTT+CGG | - | chr5_4:6895170-6895189 | None:intergenic | 35.0% | |
| AAGTATCTCCAATTCACGTT+GGG | - | chr5_4:6896089-6896108 | None:intergenic | 35.0% | |
| ! | AAAGTATCTCCAATTCACGT+TGG | - | chr5_4:6896090-6896109 | None:intergenic | 35.0% |
| ! | CCAGCTTCTCTACATTTTTA+AGG | - | chr5_4:6896254-6896273 | None:intergenic | 35.0% |
| CCTTAAAAATGTAGAGAAGC+TGG | + | chr5_4:6896251-6896270 | Msa0833790:intron | 35.0% | |
| AGAGAAGCTGGAAAAAAAAC+CGG | + | chr5_4:6896263-6896282 | Msa0833790:intron | 35.0% | |
| ! | ATTCAACAACTTTTGGCCAA+GGG | + | chr5_4:6896147-6896166 | Msa0833790:intron | 35.0% |
| AAATTGAATGGAATGACCCT+TGG | - | chr5_4:6896907-6896926 | None:intergenic | 35.0% | |
| AGAGAAGTTGAAAAAAAGCC+GGG | + | chr5_4:6897018-6897037 | Msa0833790:intron | 35.0% | |
| TCTCCAAGGTTAAGGAAATA+TGG | + | chr5_4:6897197-6897216 | Msa0833790:intron | 35.0% | |
| ! | ATTGTGAAACAGTTTTACCC+CGG | + | chr5_4:6897528-6897547 | Msa0833790:intron | 35.0% |
| CAAAATAACCAAAAGGAGTG+TGG | - | chr5_4:6897590-6897609 | None:intergenic | 35.0% | |
| ATCATCGGTGGATCAAATTT+GGG | - | chr5_4:6897814-6897833 | None:intergenic | 35.0% | |
| TATCATCGGTGGATCAAATT+TGG | - | chr5_4:6897815-6897834 | None:intergenic | 35.0% | |
| AAGGGCAAAAGTTTCATTCT+AGG | - | chr5_4:6897895-6897914 | None:intergenic | 35.0% | |
| ! | GAATGAAACTTTTGCCCTTA+AGG | + | chr5_4:6897896-6897915 | Msa0833790:intron | 35.0% |
| ACTCTCAAACAAAGCCTTAA+GGG | - | chr5_4:6897913-6897932 | None:intergenic | 35.0% | |
| AACTCTCAAACAAAGCCTTA+AGG | - | chr5_4:6897914-6897933 | None:intergenic | 35.0% | |
| !! | GCTTTGTTTGAGAGTTTGAA+GGG | + | chr5_4:6897918-6897937 | Msa0833790:intron | 35.0% |
| ! | ATTGGAGGAGAGTTTTTGAA+GGG | - | chr5_4:6898116-6898135 | None:intergenic | 35.0% |
| ! | TATTGGAGGAGAGTTTTTGA+AGG | - | chr5_4:6898117-6898136 | None:intergenic | 35.0% |
| ATAAAACCCTCCTCATTTGA+GGG | - | chr5_4:6898153-6898172 | None:intergenic | 35.0% | |
| TATAAAACCCTCCTCATTTG+AGG | - | chr5_4:6898154-6898173 | None:intergenic | 35.0% | |
| AGAAATAGAGGACATTTGGA+AGG | - | chr5_4:6898208-6898227 | None:intergenic | 35.0% | |
| TGGAAGAAATAGAGGACATT+TGG | - | chr5_4:6898212-6898231 | None:intergenic | 35.0% | |
| GGAGTAAATGGAAGAAATAG+AGG | - | chr5_4:6898220-6898239 | None:intergenic | 35.0% | |
| !! | TTAAGCTTTGTTTGCGAGTT+TGG | - | chr5_4:6898274-6898293 | None:intergenic | 35.0% |
| ! | AATCATGTAGAGGTATAGGT+AGG | + | chr5_4:6898307-6898326 | Msa0833790:intron | 35.0% |
| TAAACAAACCCATGAAGCAT+AGG | - | chr5_4:6898621-6898640 | None:intergenic | 35.0% | |
| ACCTCTCAAAAAGATTCTAC+GGG | + | chr5_4:6898647-6898666 | Msa0833790:intron | 35.0% | |
| !!! | TTTTTGGAGTTTCCTTACGT+CGG | - | chr5_4:6899104-6899123 | None:intergenic | 35.0% |
| TGATAGAAAACGATGAGACA+TGG | + | chr5_4:6899247-6899266 | Msa0833790:intron | 35.0% | |
| GCACAATGTTGAAGAAACAA+TGG | + | chr5_4:6899319-6899338 | Msa0833790:CDS | 35.0% | |
| ! | CATGGCTTTTCATTGTGAAT+AGG | - | chr5_4:6899410-6899429 | None:intergenic | 35.0% |
| ! | ATTTTCAGTACAGTGAGTCA+TGG | - | chr5_4:6899428-6899447 | None:intergenic | 35.0% |
| CAATACAAGAGTAAGGCTCA+AGG | - | chr5_4:6890249-6890268 | None:intergenic | 40.0% | |
| !! | TTTTTCAGTAAGAGGACGAG+GGG | - | chr5_4:6890344-6890363 | None:intergenic | 40.0% |
| !!! | CTTTTTCAGTAAGAGGACGA+GGG | - | chr5_4:6890345-6890364 | None:intergenic | 40.0% |
| !!! | TCTTTTTCAGTAAGAGGACG+AGG | - | chr5_4:6890346-6890365 | None:intergenic | 40.0% |
| GTGAGTCGATATTCAATTGC+AGG | + | chr5_4:6891255-6891274 | Msa0833790:intron | 40.0% | |
| !!! | ACTATTTTGGCGTATCGCTT+TGG | - | chr5_4:6892314-6892333 | None:intergenic | 40.0% |
| ! | TCAGCGGCAAAGATCTATTT+TGG | + | chr5_4:6892349-6892368 | Msa0833790:intron | 40.0% |
| ACTCGAACGTGTAAGTTCTT+CGG | + | chr5_4:6892376-6892395 | Msa0833790:intron | 40.0% | |
| ! | AGAGAACGTATGATGGAAGA+AGG | - | chr5_4:6892433-6892452 | None:intergenic | 40.0% |
| TTCATAGCTTCCTCTTTCAG+CGG | + | chr5_4:6892486-6892505 | Msa0833790:intron | 40.0% | |
| GCTTATACTTTCTCTGTGTC+TGG | + | chr5_4:6892521-6892540 | Msa0833790:intron | 40.0% | |
| TCGTTTGGGAAATGCTAAAC+AGG | + | chr5_4:6892598-6892617 | Msa0833790:intron | 40.0% | |
| TCAATCCTAACCAGTTTGGA+TGG | - | chr5_4:6892938-6892957 | None:intergenic | 40.0% | |
| !! | TCTGAGCTTGAGAAGTGTTA+AGG | + | chr5_4:6893218-6893237 | Msa0833790:intron | 40.0% |
| TTTCAACAACCGGATGATGT+AGG | + | chr5_4:6893357-6893376 | Msa0833790:intron | 40.0% | |
| GAAATCATCGGGTTTCTTCA+TGG | - | chr5_4:6893674-6893693 | None:intergenic | 40.0% | |
| !! | TAGAGAATTGGAGCATTGGA+AGG | - | chr5_4:6893980-6893999 | None:intergenic | 40.0% |
| !! | TTGGATTCTAGGATTGTGAC+TGG | - | chr5_4:6894189-6894208 | None:intergenic | 40.0% |
| GATTTGGACTGTTGGATTCT+AGG | - | chr5_4:6894200-6894219 | None:intergenic | 40.0% | |
| TTCGTACGGCTCAATGATAT+AGG | + | chr5_4:6894483-6894502 | Msa0833790:intron | 40.0% | |
| ! | AGTTTTTGCTTCATCATGGG+TGG | - | chr5_4:6894807-6894826 | None:intergenic | 40.0% |
| GGTCTCAGAACCATGAAAAA+TGG | + | chr5_4:6894888-6894907 | Msa0833790:intron | 40.0% | |
| CGTAAAAAACCTTGGCCAAA+CGG | - | chr5_4:6894973-6894992 | None:intergenic | 40.0% | |
| !!! | CGTTTGGCCAAGGTTTTTTA+CGG | + | chr5_4:6894971-6894990 | Msa0833790:intron | 40.0% |
| ATGAGCTTAGCTCAGTTGAT+AGG | - | chr5_4:6895199-6895218 | None:intergenic | 40.0% | |
| !! | TTGGTACATTGTTGGTGTCA+TGG | + | chr5_4:6895576-6895595 | Msa0833790:intron | 40.0% |
| AATAGGTTCCCAACGTGAAT+TGG | + | chr5_4:6896078-6896097 | Msa0833790:intron | 40.0% | |
| GAGAAGCTGGAAAAAAAACC+GGG | + | chr5_4:6896264-6896283 | Msa0833790:intron | 40.0% | |
| GGAAAAAAAACCGGGTCAAA+CGG | + | chr5_4:6896272-6896291 | Msa0833790:intron | 40.0% | |
| GATTAAGATACCGTTTGACC+CGG | - | chr5_4:6896285-6896304 | None:intergenic | 40.0% | |
| GGTATCTTAATCTCCCACAA+CGG | + | chr5_4:6896293-6896312 | Msa0833790:intron | 40.0% | |
| ! | TGTTTCTACATTGCCGTTGT+GGG | - | chr5_4:6896309-6896328 | None:intergenic | 40.0% |
| !! | TTGTTTCTACATTGCCGTTG+TGG | - | chr5_4:6896310-6896329 | None:intergenic | 40.0% |
| TGTGTGTGTATATATTCGCG+AGG | + | chr5_4:6896535-6896554 | Msa0833790:intron | 40.0% | |
| ! | CATTCAACAACTTTTGGCCA+AGG | + | chr5_4:6896146-6896165 | Msa0833790:intron | 40.0% |
| !! | GATTAAGGTATCGTTTGACC+CGG | - | chr5_4:6897039-6897058 | None:intergenic | 40.0% |
| TACTTCTACATTGCGGTTGT+GGG | - | chr5_4:6897063-6897082 | None:intergenic | 40.0% | |
| TTACTTCTACATTGCGGTTG+TGG | - | chr5_4:6897064-6897083 | None:intergenic | 40.0% | |
| ! | GAATTTCCAATTTTGCCCCT+AGG | - | chr5_4:6897241-6897260 | None:intergenic | 40.0% |
| ! | TTGTGAAACAGTTTTACCCC+GGG | + | chr5_4:6897529-6897548 | Msa0833790:intron | 40.0% |
| ! | ATTTTCAATGGATGTTCCCG+GGG | - | chr5_4:6897548-6897567 | None:intergenic | 40.0% |
| ! | GATTTTCAATGGATGTTCCC+GGG | - | chr5_4:6897549-6897568 | None:intergenic | 40.0% |
| ! | GGATTTTCAATGGATGTTCC+CGG | - | chr5_4:6897550-6897569 | None:intergenic | 40.0% |
| ! | GTGGTAGTGTCACAAAATAG+AGG | - | chr5_4:6897571-6897590 | None:intergenic | 40.0% |
| !! | GGCTTTGTTTGAGAGTTTGA+AGG | + | chr5_4:6897917-6897936 | Msa0833790:intron | 40.0% |
| TGTTTGAGAGTTTGAAGGGA+AGG | + | chr5_4:6897922-6897941 | Msa0833790:intron | 40.0% | |
| GTTTGAGAGTTTGAAGGGAA+GGG | + | chr5_4:6897923-6897942 | Msa0833790:intron | 40.0% | |
| TTTGAGAGTTTGAAGGGAAG+GGG | + | chr5_4:6897924-6897943 | Msa0833790:intron | 40.0% | |
| ! | ACTTTGGGGGAGAGAAATAT+AGG | + | chr5_4:6897955-6897974 | Msa0833790:intron | 40.0% |
| ! | TTTAGTTCCCTCAAATGAGG+AGG | + | chr5_4:6898143-6898162 | Msa0833790:intron | 40.0% |
| TTAGTTCCCTCAAATGAGGA+GGG | + | chr5_4:6898144-6898163 | Msa0833790:intron | 40.0% | |
| ! | ATGTAGAGGTATAGGTAGGT+AGG | + | chr5_4:6898311-6898330 | Msa0833790:intron | 40.0% |
| !! | ACCCGTAGAATCTTTTTGAG+AGG | - | chr5_4:6898651-6898670 | None:intergenic | 40.0% |
| CAATTGTAAACCAAGAGCCA+CGG | + | chr5_4:6899064-6899083 | Msa0833790:intron | 40.0% | |
| AAACACCAATGAGAATGCAG+AGG | + | chr5_4:6899346-6899365 | Msa0833790:CDS | 40.0% | |
| TATGTCCTCTGCATTCTCAT+TGG | - | chr5_4:6899354-6899373 | None:intergenic | 40.0% | |
| AGGATTATGCACAACCTCAT+CGG | + | chr5_4:6899378-6899397 | Msa0833790:CDS | 40.0% | |
| AGGTACATGCAATACTGCAT+TGG | + | chr5_4:6899609-6899628 | Msa0833790:three_prime_UTR | 40.0% | |
| ATGCATGCAAAGAACCACAG+AGG | - | chr5_4:6890318-6890337 | None:intergenic | 45.0% | |
| ! | GTGATTTTCTGTTGCAGAGC+TGG | - | chr5_4:6890800-6890819 | None:intergenic | 45.0% |
| TGCAGGGTCAACTTTCCAAA+CGG | + | chr5_4:6891272-6891291 | Msa0833790:intron | 45.0% | |
| ! | GAACGTATGATGGAAGAAGG+TGG | - | chr5_4:6892430-6892449 | None:intergenic | 45.0% |
| AAAAATACTTGGGTGGGCAG+TGG | - | chr5_4:6892468-6892487 | None:intergenic | 45.0% | |
| TTCCTCTTTCAGCGGTAATG+AGG | + | chr5_4:6892494-6892513 | Msa0833790:intron | 45.0% | |
| TGGCCTAACTTGAGACAGAT+TGG | + | chr5_4:6893126-6893145 | Msa0833790:intron | 45.0% | |
| GCTCATCAACCTACATCATC+CGG | - | chr5_4:6893369-6893388 | None:intergenic | 45.0% | |
| GTAACAATTGGTCAGGTTCG+AGG | - | chr5_4:6893394-6893413 | None:intergenic | 45.0% | |
| AAGACAATGCCAATTGGGAC+TGG | - | chr5_4:6893644-6893663 | None:intergenic | 45.0% | |
| ! | AGGCTTTGATCGAGGAAAAC+AGG | - | chr5_4:6893960-6893979 | None:intergenic | 45.0% |
| ! | TGAGCCGTACGAAAGTTGAT+TGG | - | chr5_4:6894476-6894495 | None:intergenic | 45.0% |
| CAGTCAACTCAAGTCATGCA+TGG | + | chr5_4:6894867-6894886 | Msa0833790:intron | 45.0% | |
| ACTTAGATACCGTTTGGCCA+AGG | + | chr5_4:6894961-6894980 | Msa0833790:intron | 45.0% | |
| TCAACTGAGCTAAGCTCATG+AGG | + | chr5_4:6895200-6895219 | Msa0833790:intron | 45.0% | |
| ATTGCGGTTGTGGGAGATTA+AGG | - | chr5_4:6897054-6897073 | None:intergenic | 45.0% | |
| ATTACCAAATTGCCCCTCCT+AGG | + | chr5_4:6897221-6897240 | Msa0833790:intron | 45.0% | |
| TTACCAAATTGCCCCTCCTA+GGG | + | chr5_4:6897222-6897241 | Msa0833790:intron | 45.0% | |
| ! | TTCCAATTTTGCCCCTAGGA+GGG | - | chr5_4:6897237-6897256 | None:intergenic | 45.0% |
| ! | TTTCCAATTTTGCCCCTAGG+AGG | - | chr5_4:6897238-6897257 | None:intergenic | 45.0% |
| ! | TGACACTACCACACTCCTTT+TGG | + | chr5_4:6897579-6897598 | Msa0833790:intron | 45.0% |
| GAAGGGGAAGGAAAGACTTT+GGG | + | chr5_4:6897940-6897959 | Msa0833790:intron | 45.0% | |
| AAGGGGAAGGAAAGACTTTG+GGG | + | chr5_4:6897941-6897960 | Msa0833790:intron | 45.0% | |
| CATTTGGAAGGAGTGGCTTT+GGG | - | chr5_4:6898196-6898215 | None:intergenic | 45.0% | |
| ACATTTGGAAGGAGTGGCTT+TGG | - | chr5_4:6898197-6898216 | None:intergenic | 45.0% | |
| TAGAGGACATTTGGAAGGAG+TGG | - | chr5_4:6898203-6898222 | None:intergenic | 45.0% | |
| TTGGAGGGAAAAGAAAGGCT+TGG | - | chr5_4:6898255-6898274 | None:intergenic | 45.0% | |
| CGAGTTTGGAGGGAAAAGAA+AGG | - | chr5_4:6898260-6898279 | None:intergenic | 45.0% | |
| !! | GCTTTGTTTGCGAGTTTGGA+GGG | - | chr5_4:6898270-6898289 | None:intergenic | 45.0% |
| !! | AGCTTTGTTTGCGAGTTTGG+AGG | - | chr5_4:6898271-6898290 | None:intergenic | 45.0% |
| TGCCTAAAGCCTATGCTTCA+TGG | + | chr5_4:6898609-6898628 | Msa0833790:intron | 45.0% | |
| GCCTAAAGCCTATGCTTCAT+GGG | + | chr5_4:6898610-6898629 | Msa0833790:intron | 45.0% | |
| ACCCATGAAGCATAGGCTTT+AGG | - | chr5_4:6898614-6898633 | None:intergenic | 45.0% | |
| CGTGGCTCTTGGTTTACAAT+TGG | - | chr5_4:6899066-6899085 | None:intergenic | 45.0% | |
| !! | AGTTTTACTGTGCCGACGTA+AGG | + | chr5_4:6899089-6899108 | Msa0833790:intron | 45.0% |
| TCTTCAACATTGTGCTGAGC+TGG | - | chr5_4:6899314-6899333 | None:intergenic | 45.0% | |
| TGAATAGGTGCTTTCCGATG+AGG | - | chr5_4:6899395-6899414 | None:intergenic | 45.0% | |
| !!! | TACTATTTTTATTATTTTTT+TGG | + | chr5_4:6890933-6890952 | Msa0833790:intron | 5.0% |
| !!! | ATTATTATTTCTTTTTTTTT+TGG | - | chr5_4:6891233-6891252 | None:intergenic | 5.0% |
| !!! | TTTGATTTATTTATATTTTT+TGG | - | chr5_4:6894050-6894069 | None:intergenic | 5.0% |
| !!! | TTTGAATTTTTTTTTTTTTA+CGG | + | chr5_4:6895127-6895146 | Msa0833790:intron | 5.0% |
| !! | ATATTATATGATATTATATT+TGG | + | chr5_4:6895557-6895576 | Msa0833790:intron | 5.0% |
| !!! | TATATAAGTATAAATTTTTT+AGG | + | chr5_4:6895672-6895691 | Msa0833790:intron | 5.0% |
| !! | ATATTAAAAAATTAAAGAAT+AGG | + | chr5_4:6896061-6896080 | Msa0833790:intron | 5.0% |
| !! | ATAGTTAAAAATAAAAAAAT+TGG | + | chr5_4:6896356-6896375 | Msa0833790:intron | 5.0% |
| !!! | GTTTTTAAAAATATAAAAAT+TGG | + | chr5_4:6896392-6896411 | Msa0833790:intron | 5.0% |
| !! | AAAAAAGAAATAAAAATATT+TGG | + | chr5_4:6896562-6896581 | Msa0833790:intron | 5.0% |
| !! | AAAAAGATAATAAAATTAAA+TGG | + | chr5_4:6896691-6896710 | Msa0833790:intron | 5.0% |
| !! | TAAAATAAAATAAAGTTAAA+TGG | + | chr5_4:6896750-6896769 | Msa0833790:intron | 5.0% |
| !! | TAATAAAAAAGAAAATAATT+TGG | + | chr5_4:6897162-6897181 | Msa0833790:intron | 5.0% |
| AGGATGAGGAGCAGAAGAAG+AGG | - | chr5_4:6890298-6890317 | None:intergenic | 50.0% | |
| GCAAAGAACCACAGAGGATG+AGG | - | chr5_4:6890312-6890331 | None:intergenic | 50.0% | |
| GCAGGGTCAACTTTCCAAAC+GGG | + | chr5_4:6891273-6891292 | Msa0833790:intron | 50.0% | |
| ACCTTTGCTGCAAGAAGGGA+AGG | - | chr5_4:6891303-6891322 | None:intergenic | 50.0% | |
| TTACAAACCCGTGCTTCGCA+CGG | + | chr5_4:6891768-6891787 | Msa0833790:intron | 50.0% | |
| TATTCAACCCGTGCGAAGCA+CGG | - | chr5_4:6891779-6891798 | None:intergenic | 50.0% | |
| ! | GCATTGGAAGGCTTTGATCG+AGG | - | chr5_4:6893968-6893987 | None:intergenic | 50.0% |
| ! | TCCCAGCGTGAGTTGAAAAG+CGG | + | chr5_4:6896822-6896841 | Msa0833790:intron | 50.0% |
| !! | ACCGCTTTTCAACTCACGCT+GGG | - | chr5_4:6896826-6896845 | None:intergenic | 50.0% |
| TACCAAATTGCCCCTCCTAG+GGG | + | chr5_4:6897223-6897242 | Msa0833790:intron | 50.0% | |
| ! | TCCAATTTTGCCCCTAGGAG+GGG | - | chr5_4:6897236-6897255 | None:intergenic | 50.0% |
| AGAGTTTGAAGGGAAGGGGA+AGG | + | chr5_4:6897928-6897947 | Msa0833790:intron | 50.0% | |
| GGAAGGGGAAGGAAAGACTT+TGG | + | chr5_4:6897939-6897958 | Msa0833790:intron | 50.0% | |
| AGGGGAAGGAAAGACTTTGG+GGG | + | chr5_4:6897942-6897961 | Msa0833790:intron | 50.0% | |
| GTAAAACTGACCGTGGCTCT+TGG | - | chr5_4:6899077-6899096 | None:intergenic | 50.0% | |
| ACGATGAGACATGGTTGTGC+AGG | + | chr5_4:6899256-6899275 | Msa0833790:intron | 50.0% | |
| ACATGGTTGTGCAGGCTGAA+AGG | + | chr5_4:6899264-6899283 | Msa0833790:intron | 50.0% | |
| CATGGTTGTGCAGGCTGAAA+GGG | + | chr5_4:6899265-6899284 | Msa0833790:intron | 50.0% | |
| ATGGTTGTGCAGGCTGAAAG+GGG | + | chr5_4:6899266-6899285 | Msa0833790:intron | 50.0% | |
| GGACATGCAAGGTCAATGCT+GGG | + | chr5_4:6899287-6899306 | Msa0833790:CDS | 50.0% | |
| GAATGCAGAGGACATAGTCG+AGG | + | chr5_4:6899358-6899377 | Msa0833790:CDS | 50.0% | |
| CTTCTGCTCCTCATCCTCTG+TGG | + | chr5_4:6890301-6890320 | Msa0833790:CDS | 55.0% | |
| GCCTTCCCTTCTTGCAGCAA+AGG | + | chr5_4:6891299-6891318 | Msa0833790:CDS | 55.0% | |
| TACAAACCCGTGCTTCGCAC+GGG | + | chr5_4:6891769-6891788 | Msa0833790:intron | 55.0% | |
| ATTCAACCCGTGCGAAGCAC+GGG | - | chr5_4:6891778-6891797 | None:intergenic | 55.0% | |
| CGCCTCATTACCGCTGAAAG+AGG | - | chr5_4:6892499-6892518 | None:intergenic | 55.0% | |
| CAAGTTCGGGGTTCGAAACC+CGG | - | chr5_4:6895156-6895175 | None:intergenic | 55.0% | |
| !! | CACCGCTTTTCAACTCACGC+TGG | - | chr5_4:6896827-6896846 | None:intergenic | 55.0% |
| GGTGGCACTCTCCAAGGTTA+AGG | + | chr5_4:6897189-6897208 | Msa0833790:intron | 55.0% | |
| CGGCACAGTAAAACTGACCG+TGG | - | chr5_4:6899084-6899103 | None:intergenic | 55.0% | |
| AGGCTGAAAGGGGACATGCA+AGG | + | chr5_4:6899276-6899295 | Msa0833790:intron | 55.0% | |
| GGGACATGCAAGGTCAATGC+TGG | + | chr5_4:6899286-6899305 | Msa0833790:CDS | 55.0% | |
| ! | GAAGGGAAGGCGTACCCGTT+TGG | - | chr5_4:6891290-6891309 | None:intergenic | 60.0% |
| CGGGTTTCGAACCCCGAACT+TGG | + | chr5_4:6895154-6895173 | Msa0833790:intron | 60.0% | |
| GGATGAGGTGGCACTCTCCA+AGG | + | chr5_4:6897183-6897202 | Msa0833790:intron | 60.0% | |
| TGCCCCTAGGAGGGGCAATT+TGG | - | chr5_4:6897228-6897247 | None:intergenic | 60.0% | |
| GCCCCTCCTAGGGGCAAAAT+TGG | + | chr5_4:6897232-6897251 | Msa0833790:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 6890195 | 6899684 | 6890195 | ID=Msa0833790;Name=Msa0833790 |
| chr5_4 | mRNA | 6890195 | 6899684 | 6890195 | ID=Msa0833790-mRNA-1;Parent=Msa0833790;Name=Msa0833790-mRNA-1;_AED=0.02;_eAED=0.02;_QI=88|1|1|1|1|1|4|254|154 |
| chr5_4 | exon | 6890195 | 6890390 | 6890195 | ID=Msa0833790-mRNA-1:exon:3046;Parent=Msa0833790-mRNA-1 |
| chr5_4 | exon | 6890725 | 6890884 | 6890725 | ID=Msa0833790-mRNA-1:exon:3047;Parent=Msa0833790-mRNA-1 |
| chr5_4 | exon | 6891277 | 6891320 | 6891277 | ID=Msa0833790-mRNA-1:exon:3048;Parent=Msa0833790-mRNA-1 |
| chr5_4 | exon | 6899278 | 6899684 | 6899278 | ID=Msa0833790-mRNA-1:exon:3049;Parent=Msa0833790-mRNA-1 |
| chr5_4 | five_prime_UTR | 6890195 | 6890282 | 6890195 | ID=Msa0833790-mRNA-1:five_prime_utr;Parent=Msa0833790-mRNA-1 |
| chr5_4 | CDS | 6890283 | 6890390 | 6890283 | ID=Msa0833790-mRNA-1:cds;Parent=Msa0833790-mRNA-1 |
| chr5_4 | CDS | 6890725 | 6890884 | 6890725 | ID=Msa0833790-mRNA-1:cds;Parent=Msa0833790-mRNA-1 |
| chr5_4 | CDS | 6891277 | 6891320 | 6891277 | ID=Msa0833790-mRNA-1:cds;Parent=Msa0833790-mRNA-1 |
| chr5_4 | CDS | 6899278 | 6899430 | 6899278 | ID=Msa0833790-mRNA-1:cds;Parent=Msa0833790-mRNA-1 |
| chr5_4 | three_prime_UTR | 6899431 | 6899684 | 6899431 | ID=Msa0833790-mRNA-1:three_prime_utr;Parent=Msa0833790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
