AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0607070

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0607070 MtrunA17_Chr4g0038461 97.674 301 7 0 1 301 1 301 0.0 564
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0607070 AT2G21140.1 42.345 307 131 14 1 284 1 284 1.86e-42 154
Msa0607070 AT2G21140.1 49.091 165 50 9 301 457 180 318 1.35e-11 66.2
Msa0607070 AT4G38770.1 58.015 131 46 3 33 162 31 153 3.08e-39 148

Find 180 sgRNAs with CRISPR-Local

Find 492 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCACCACCCCAAGTATTT+TGG 0.149326 4_2:+53752603 Msa0607070:CDS
ACAACTGGTGGTTTGTAAAT+TGG 0.182003 4_2:-53752426 None:intergenic
GAGAAGCTACTAAGCTTCTT+TGG 0.262352 4_2:-53750665 None:intergenic
ACTACTGGAGGCTTATATAT+TGG 0.279939 4_2:-53752381 None:intergenic
AGTATTGATTGATCTGCTTT+AGG 0.293210 4_2:+53750698 Msa0607070:five_prime_UTR
GAAGAGAGGCCAAAAGAATT+TGG 0.300313 4_2:-53751686 None:intergenic
ACCGGTGGTGGTTGTGGCTT+TGG 0.311135 4_2:-53752198 None:intergenic
CTCTTCCATCACCCCAAGTT+TGG 0.325374 4_2:+53752705 Msa0607070:CDS
TTCTTCCATCACCCAAAGTT+TGG 0.326013 4_2:+53752654 Msa0607070:CDS
CATGTACCTCCAAATTCTTT+TGG 0.326491 4_2:+53751677 Msa0607070:CDS
ATTGGAACAACCGGTGGCTT+TGG 0.327984 4_2:-53752408 None:intergenic
GGGTGGTGGAAGAAGCTCTT+TGG 0.328567 4_2:-53752591 None:intergenic
CTTAAATTTCATTGTCGGTT+TGG 0.341172 4_2:+53750563 Msa0607070:five_prime_UTR
ACTGGAACGGGTGGTAAAAC+TGG 0.341382 4_2:-53752261 None:intergenic
ATCACCCTAAGTATGGAAAA+TGG 0.345887 4_2:+53752556 Msa0607070:CDS
GGTGGTTGTGGCTTTGGAAC+CGG 0.357210 4_2:-53752192 None:intergenic
GTGGCCACTTTCCAAACTTT+GGG 0.360377 4_2:-53752665 None:intergenic
GGGTGTTTATGGAAAATCTT+TGG 0.361066 4_2:-53751784 None:intergenic
TGGAAAATCTTTGGTGGAAA+TGG 0.364399 4_2:-53751775 None:intergenic
ATTGGAACAGGTGGTAGAAC+TGG 0.374309 4_2:-53752363 None:intergenic
GGAAAGGGAGGTTTGTAGAT+AGG 0.379613 4_2:-53751856 None:intergenic
AGGGCAAGGTTTCTTGTAGA+TGG 0.383488 4_2:-53751887 None:intergenic
GGTGGCCACTTTCCAAACTT+TGG 0.388021 4_2:-53752666 None:intergenic
CATGGTTTCTTGACCGGAAC+CGG 0.393305 4_2:-53752216 None:intergenic
ATTTCATTGTCGGTTTGGTT+TGG 0.393582 4_2:+53750568 Msa0607070:five_prime_UTR
ACTGGTGGTGGAAGTGCCTT+TGG 0.394673 4_2:-53752303 None:intergenic
CATGGTTTCTTGACTGGAAC+AGG 0.398406 4_2:-53752111 None:intergenic
AAGAGCACAAAAGTGCTCTT+TGG 0.399281 4_2:-53750748 None:intergenic
ACCGGAGGAGGTTTGTATAC+TGG 0.407753 4_2:-53752174 None:intergenic
AGAACTGGGTGCTCAATCTT+TGG 0.407928 4_2:-53752348 None:intergenic
GTGGACATGGTTTCTTGATC+GGG 0.409936 4_2:-53752326 None:intergenic
ACCGGTGGAGGTTTGTATAC+TGG 0.412309 4_2:-53752279 None:intergenic
TACCAGCAGCAGCAGTACTT+AGG 0.413145 4_2:-53751633 None:intergenic
ACTGGAGCAGGTGGTGGAAC+TGG 0.413223 4_2:-53752156 None:intergenic
TGCTCAATCTTTGGTGGACA+TGG 0.421709 4_2:-53752339 None:intergenic
GCCACAACCACCACCGGTTC+CGG 0.423338 4_2:+53752203 Msa0607070:CDS
TAGATAGGAATATGAGGAAA+TGG 0.423815 4_2:-53751841 None:intergenic
TTCTTGATCGGGACTGGTGG+TGG 0.425402 4_2:-53752315 None:intergenic
CAACTACCTCAACTGTACTA+TGG 0.428844 4_2:-53750817 None:intergenic
GGTGGACATGGTTTCTTGAT+CGG 0.429905 4_2:-53752327 None:intergenic
ACAGGTGTAGGTGGAGGAAG+AGG 0.429970 4_2:-53751967 None:intergenic
GGGAGAGGTTTATGGTAAAC+AGG 0.430983 4_2:-53752018 None:intergenic
GGAACTGGATGTTCAACCTT+TGG 0.432776 4_2:-53752141 None:intergenic
AATGGAGGTTTCTTGTAGAT+AGG 0.434086 4_2:-53751823 None:intergenic
GGAAGAGGTTTCTCATAAAC+AGG 0.436457 4_2:-53751952 None:intergenic
GGTGGAAGTGCCTTTGGAAC+CGG 0.437983 4_2:-53752297 None:intergenic
AGGTTCTTAAATTTCATTGT+CGG 0.439658 4_2:+53750558 Msa0607070:five_prime_UTR
ACAGTTGAGGTAGTTGGGCT+TGG 0.440510 4_2:+53750824 Msa0607070:CDS
TTGAATGGAGGAAGAACAAC+TGG 0.443546 4_2:-53752441 None:intergenic
GGACATGGTGGTTTCTTGAA+TGG 0.444236 4_2:-53752456 None:intergenic
ACCGGAACCGGTGGTGGTTG+TGG 0.444913 4_2:-53752204 None:intergenic
GGTGGACATGGTTTCTTGAC+TGG 0.446271 4_2:-53752117 None:intergenic
TCATATATAGGCACAGGTGG+AGG 0.447385 4_2:-53751907 None:intergenic
TAGGTGGAGGGAGAGGTTTA+TGG 0.447625 4_2:-53752026 None:intergenic
CATGGTTTCTTGATCGGGAC+TGG 0.450738 4_2:-53752321 None:intergenic
GGTTTCTTGTAGATAGGAAC+AGG 0.451221 4_2:-53751817 None:intergenic
TGATGGAAGAAGCTCTTATG+AGG 0.451803 4_2:-53752642 None:intergenic
AAGACTAGCCAGGCTTTCTC+AGG 0.452806 4_2:+53750878 Msa0607070:CDS
ATAGTACAGTTGAGGTAGTT+GGG 0.453640 4_2:+53750819 Msa0607070:CDS
GGAAGAGGTTTATGATATAC+AGG 0.458760 4_2:-53752084 None:intergenic
AAATCAGGATGAGGATGCTT+AGG 0.459714 4_2:-53751724 None:intergenic
TTCTTGTAGATGGGAATATG+AGG 0.460426 4_2:-53751877 None:intergenic
AAGCTCTTTGGAGGCAGAGT+TGG 0.461018 4_2:-53752486 None:intergenic
ACAGGCACAGGCGGAGGAAG+AGG 0.461209 4_2:-53752000 None:intergenic
CATAGTACAGTTGAGGTAGT+TGG 0.461236 4_2:+53750818 Msa0607070:CDS
AGTGCCTTTGGAACCGGTGG+AGG 0.465214 4_2:-53752291 None:intergenic
GGTGGCTTTGGAATTACTAC+TGG 0.468914 4_2:-53752396 None:intergenic
TTCTTGACTGGAACAGGAGG+AGG 0.469362 4_2:-53752105 None:intergenic
ACCTAATTATGAGGACTTAG+TGG 0.469386 4_2:-53752738 None:intergenic
ATCACCCCAAGTTTGGATCA+TGG 0.469401 4_2:+53752712 Msa0607070:CDS
ATGATCCAAACTTGGGGTGA+TGG 0.472534 4_2:-53752710 None:intergenic
ACAGGTGTAGGAGGAGGGAT+AGG 0.473148 4_2:-53751934 None:intergenic
TGTGGCTTTGGAACCGGAGG+AGG 0.476133 4_2:-53752186 None:intergenic
ACTGGAACAGGAGGAGGAAG+AGG 0.480945 4_2:-53752099 None:intergenic
GGAGGCTTATATATTGGAAC+AGG 0.482206 4_2:-53752375 None:intergenic
ACCAGCAGCAGCAGTACTTA+GGG 0.485236 4_2:-53751632 None:intergenic
TTCCAAAATACTTGGGGTGG+TGG 0.485411 4_2:-53752605 None:intergenic
TGGAGGCCATGATCCAAACT+TGG 0.487208 4_2:-53752718 None:intergenic
TAGATGGGAATATGAGGAAA+GGG 0.489468 4_2:-53751871 None:intergenic
GCACCTTGTCCTGCTCATGA+TGG 0.491575 4_2:+53751559 Msa0607070:CDS
AAAACTGGATGCTCAACCTT+TGG 0.492655 4_2:-53752246 None:intergenic
GGAGGTTTGTATACTGGAAC+GGG 0.495970 4_2:-53752273 None:intergenic
TCAACCTTTGGTGGTGGACA+TGG 0.497538 4_2:-53752234 None:intergenic
AAAAGAGCCACCTAATTATG+AGG 0.498709 4_2:-53752747 None:intergenic
TCAACCTTTGGTGGTGGACA+TGG 0.500021 4_2:-53752129 None:intergenic
GGTGGACATGGTTTCTTGAC+CGG 0.505845 4_2:-53752222 None:intergenic
CCTCAAGAAATTGTAAAAGA+AGG 0.509177 4_2:+53751490 Msa0607070:CDS
AAGAAGCTCTTATGAGGGAT+TGG 0.509685 4_2:-53752636 None:intergenic
GGTTTGTAGATAGGAATATG+AGG 0.511489 4_2:-53751847 None:intergenic
ATTGACTGCAAAGAAGCAAA+TGG 0.512954 4_2:+53751406 Msa0607070:CDS
ACAAAGTACCTGAGAAAGCC+TGG 0.513034 4_2:-53750886 None:intergenic
TTCTTGACCGGAACCGGTGG+TGG 0.513178 4_2:-53752210 None:intergenic
GTCTAATATATAAACAATGT+TGG 0.513532 4_2:-53750600 None:intergenic
GGAAGAGGTTTCTCATACAC+AGG 0.514773 4_2:-53752051 None:intergenic
GAACAATATTAAGACTAGCC+AGG 0.519758 4_2:+53750868 Msa0607070:CDS
CAAACTTGGGGTGATGGAAG+AGG 0.519949 4_2:-53752704 None:intergenic
TGGTGGAAGAAGCTCTTTGG+AGG 0.520821 4_2:-53752588 None:intergenic
GGAGGTTTGTATACTGGAGC+AGG 0.522258 4_2:-53752168 None:intergenic
AAGAAGCTCTTTGGAGGCAA+TGG 0.524273 4_2:-53752582 None:intergenic
TCCAGTATACAAACCTCCTC+CGG 0.524551 4_2:+53752173 Msa0607070:CDS
GGGCAAGGTTTCTTGTAGAT+GGG 0.525451 4_2:-53751886 None:intergenic
ACTTTCCAAACTTTGGGTGA+TGG 0.525688 4_2:-53752659 None:intergenic
GGAAGAGGTTTCTCATAGAC+AGG 0.529446 4_2:-53751985 None:intergenic
TCATAAACAGGTGTAGGAGG+AGG 0.529472 4_2:-53751940 None:intergenic
TGTTTATGGAAAATCTTTGG+TGG 0.529934 4_2:-53751781 None:intergenic
TTGTATACTGGAGCAGGTGG+TGG 0.530491 4_2:-53752162 None:intergenic
ATCACCCAAAGTTTGGAAAG+TGG 0.535768 4_2:+53752661 Msa0607070:CDS
AAGAACCTCACATGGTTCAA+AGG 0.536553 4_2:-53750543 None:intergenic
GGCTTTGGAATTACTACTGG+AGG 0.536776 4_2:-53752393 None:intergenic
TGGAGGTTTGTATACTGGAA+CGG 0.538317 4_2:-53752274 None:intergenic
GGTTTGTAAATTGGAACAAC+CGG 0.540910 4_2:-53752417 None:intergenic
AAAGCAGATCAATCAATACT+TGG 0.540981 4_2:-53750695 None:intergenic
ACTGGATGTTCAACCTTTGG+TGG 0.542345 4_2:-53752138 None:intergenic
TTCTCATAAACAGGTGTAGG+AGG 0.543447 4_2:-53751943 None:intergenic
ACTGGGTGCTCAATCTTTGG+TGG 0.543549 4_2:-53752345 None:intergenic
TCCAAAGCCACAACCACCAC+CGG 0.544433 4_2:+53752197 Msa0607070:CDS
ACAGGCGTAGGTGGAGGAAG+AGG 0.545913 4_2:-53752066 None:intergenic
GGCTTATATATTGGAACAGG+TGG 0.547652 4_2:-53752372 None:intergenic
GGTTTCTCATAAACAGGTGT+AGG 0.548606 4_2:-53751946 None:intergenic
ATAGGCACAGGTGGAGGGCA+AGG 0.548824 4_2:-53751901 None:intergenic
GGAGGCCATGATCCAAACTT+GGG 0.549567 4_2:-53752717 None:intergenic
AAAATCTTTGGTGGAAATGG+TGG 0.550630 4_2:-53751772 None:intergenic
ACAGGTGTAGGTGGAGGGAG+AGG 0.551926 4_2:-53752033 None:intergenic
TGATATACAGGCGTAGGTGG+AGG 0.552048 4_2:-53752072 None:intergenic
GTAGATGGGAATATGAGGAA+AGG 0.552981 4_2:-53751872 None:intergenic
TCATACACAGGTGTAGGTGG+AGG 0.556428 4_2:-53752039 None:intergenic
TGGTAAACAGGCACAGGCGG+AGG 0.557803 4_2:-53752006 None:intergenic
AAGCTCTTATGAGGGATTGG+TGG 0.558802 4_2:-53752633 None:intergenic
ATGGGAATATGAGGAAAGGG+AGG 0.558873 4_2:-53751868 None:intergenic
GGTTTATGGTAAACAGGCAC+AGG 0.560487 4_2:-53752012 None:intergenic
CATATATAGGCACAGGTGGA+GGG 0.562809 4_2:-53751906 None:intergenic
ACCCTAAGTACTGCTGCTGC+TGG 0.563864 4_2:+53751631 Msa0607070:CDS
GGTTTATGATATACAGGCGT+AGG 0.567260 4_2:-53752078 None:intergenic
GGAGGCAGAGTTGGAAGAGG+TGG 0.568083 4_2:-53752477 None:intergenic
GGATGCTCAACCTTTGGTGG+TGG 0.571275 4_2:-53752240 None:intergenic
TTCTCATAGACAGGTGTAGG+TGG 0.573276 4_2:-53751976 None:intergenic
AAGCTCTTTGGAGGCAATGG+AGG 0.573741 4_2:-53752579 None:intergenic
TTCTCATACACAGGTGTAGG+TGG 0.574160 4_2:-53752042 None:intergenic
ACTGGATGCTCAACCTTTGG+TGG 0.575483 4_2:-53752243 None:intergenic
GGTTTCTCATAGACAGGTGT+AGG 0.575587 4_2:-53751979 None:intergenic
TCATAGACAGGTGTAGGTGG+AGG 0.577698 4_2:-53751973 None:intergenic
AATTGAGGTAAATCAGGATG+AGG 0.587264 4_2:-53751733 None:intergenic
TTTGGAGGCAGAGTTGGAAG+AGG 0.589114 4_2:-53752480 None:intergenic
GGAAGTGCCTTTGGAACCGG+TGG 0.589459 4_2:-53752294 None:intergenic
TTATGATATACAGGCGTAGG+TGG 0.589531 4_2:-53752075 None:intergenic
TCCAGTATACAAACCTCCAC+CGG 0.590695 4_2:+53752278 Msa0607070:CDS
GGTTTCTCATACACAGGTGT+AGG 0.592215 4_2:-53752045 None:intergenic
GGATGTTCAACCTTTGGTGG+TGG 0.593017 4_2:-53752135 None:intergenic
CATAAACAGGTGTAGGAGGA+GGG 0.593725 4_2:-53751939 None:intergenic
CAAACCTCCACCGGTTCCAA+AGG 0.595650 4_2:+53752287 Msa0607070:CDS
GAAACCATGTCCACCACCAA+AGG 0.604111 4_2:+53752125 Msa0607070:CDS
GAAACCATGTCCACCACCAA+AGG 0.604111 4_2:+53752230 Msa0607070:CDS
GAGAGGCCAAAAGAATTTGG+AGG 0.605203 4_2:-53751683 None:intergenic
GGTTTCTTGATCGGGACTGG+TGG 0.605416 4_2:-53752318 None:intergenic
TTGGAACAGGTGGTAGAACT+GGG 0.608093 4_2:-53752362 None:intergenic
AGAGTTGGAAGAGGTGGACA+TGG 0.609427 4_2:-53752471 None:intergenic
GGTTTCTTGACCGGAACCGG+TGG 0.610970 4_2:-53752213 None:intergenic
AGTAGTAATTCCAAAGCCAC+CGG 0.613019 4_2:+53752398 Msa0607070:CDS
AAAAGAGGATGTTTGAAGAG+AGG 0.615228 4_2:-53751700 None:intergenic
ATAGGAATATGAGGAAATGG+AGG 0.616115 4_2:-53751838 None:intergenic
GTCCACCTTTGAACCATGTG+AGG 0.621477 4_2:+53750538 Msa0607070:five_prime_UTR
CATACACAGGTGTAGGTGGA+GGG 0.625803 4_2:-53752038 None:intergenic
TTCTTGTAGATAGGAACAGG+AGG 0.631040 4_2:-53751814 None:intergenic
AGGCCATCATGAGCAGGACA+AGG 0.637081 4_2:-53751562 None:intergenic
TTGTAAATTGGAACAACCGG+TGG 0.639441 4_2:-53752414 None:intergenic
GTTGGAAGAGGTGGACATGG+TGG 0.641805 4_2:-53752468 None:intergenic
GGTTGTGGCTTTGGAACCGG+AGG 0.643174 4_2:-53752189 None:intergenic
AACCTCACATGGTTCAAAGG+TGG 0.643285 4_2:-53750540 None:intergenic
GGTTTGTATACTGGAGCAGG+TGG 0.652100 4_2:-53752165 None:intergenic
TTATGGTAAACAGGCACAGG+CGG 0.653317 4_2:-53752009 None:intergenic
TGGAGACCATAGTACAGTTG+AGG 0.656125 4_2:+53750811 Msa0607070:CDS
GGTTTCTTGACTGGAACAGG+AGG 0.656712 4_2:-53752108 None:intergenic
CATGGTGGTTTCTTGAATGG+AGG 0.661048 4_2:-53752453 None:intergenic
GATGGAAGAAGCTCTTATGA+GGG 0.661558 4_2:-53752641 None:intergenic
AATGGAGGAAGAACAACTGG+TGG 0.671156 4_2:-53752438 None:intergenic
GAGGCCATGATCCAAACTTG+GGG 0.674792 4_2:-53752716 None:intergenic
TGAAATTTAAGAACCTCACA+TGG 0.680500 4_2:-53750551 None:intergenic
TAATTATGAGGACTTAGTGG+AGG 0.686242 4_2:-53752735 None:intergenic
GAGTATACTACTAATTTGAG+AGG 0.686667 4_2:-53750622 None:intergenic
GGTTTGTATACTGGAACGGG+TGG 0.692269 4_2:-53752270 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATCAAAAAAAATGTTT+TGG + chr4_2:53750945-53750964 Msa0607070:intron 10.0%
!!! TTTTATCAAAAAAAATGTTT+TGG + chr4_2:53750945-53750964 Msa0607070:intron 10.0%
!! GTCTAATATATAAACAATGT+TGG - chr4_2:53750603-53750622 None:intergenic 20.0%
!! ATCAAGTATCTCTAAATATT+AGG + chr4_2:53751077-53751096 Msa0607070:intron 20.0%
!!! TTGTTTATATTTTGTTAGAG+AGG - chr4_2:53751246-53751265 None:intergenic 20.0%
!! TCTCTTTGTAACAAAATATA+AGG - chr4_2:53751320-53751339 None:intergenic 20.0%
!! GTCTAATATATAAACAATGT+TGG - chr4_2:53750603-53750622 None:intergenic 20.0%
!! ATCAAGTATCTCTAAATATT+AGG + chr4_2:53751077-53751096 Msa0607070:intron 20.0%
!!! TTGTTTATATTTTGTTAGAG+AGG - chr4_2:53751246-53751265 None:intergenic 20.0%
!! TCTCTTTGTAACAAAATATA+AGG - chr4_2:53751320-53751339 None:intergenic 20.0%
!! GATTTTGTTAATAGTATAGC+TGG + chr4_2:53750489-53750508 Msa0607070:five_prime_UTR 25.0%
! AGGTTCTTAAATTTCATTGT+CGG + chr4_2:53750558-53750577 Msa0607070:five_prime_UTR 25.0%
! TTTCTTTGGTTAAAAAGAAG+AGG - chr4_2:53750993-53751012 None:intergenic 25.0%
! CTTGATAAAAGTGATATAGT+AGG - chr4_2:53751063-53751082 None:intergenic 25.0%
! AACTATGAGTATCAAATTCA+TGG - chr4_2:53751197-53751216 None:intergenic 25.0%
!!! TTGTGCATAATTTTTTTGCA+GGG + chr4_2:53751371-53751390 Msa0607070:intron 25.0%
!!! AATGGACATTTTAAAACAAG+AGG + chr4_2:53751424-53751443 Msa0607070:CDS 25.0%
!!! ATGGACATTTTAAAACAAGA+GGG + chr4_2:53751425-53751444 Msa0607070:CDS 25.0%
!! TTTTACAATTTCTTGAGGAA+GGG - chr4_2:53751488-53751507 None:intergenic 25.0%
!!! TTTTGACTTGATGACAATTT+TGG - chr4_2:53751596-53751615 None:intergenic 25.0%
!! GATTTTGTTAATAGTATAGC+TGG + chr4_2:53750489-53750508 Msa0607070:five_prime_UTR 25.0%
! AGGTTCTTAAATTTCATTGT+CGG + chr4_2:53750558-53750577 Msa0607070:five_prime_UTR 25.0%
! TTTCTTTGGTTAAAAAGAAG+AGG - chr4_2:53750993-53751012 None:intergenic 25.0%
! CTTGATAAAAGTGATATAGT+AGG - chr4_2:53751063-53751082 None:intergenic 25.0%
! AACTATGAGTATCAAATTCA+TGG - chr4_2:53751197-53751216 None:intergenic 25.0%
!!! TTGTGCATAATTTTTTTGCA+GGG + chr4_2:53751371-53751390 Msa0607070:intron 25.0%
!!! AATGGACATTTTAAAACAAG+AGG + chr4_2:53751424-53751443 Msa0607070:CDS 25.0%
!!! ATGGACATTTTAAAACAAGA+GGG + chr4_2:53751425-53751444 Msa0607070:CDS 25.0%
!! TTTTACAATTTCTTGAGGAA+GGG - chr4_2:53751488-53751507 None:intergenic 25.0%
!!! TTTTGACTTGATGACAATTT+TGG - chr4_2:53751596-53751615 None:intergenic 25.0%
TGAAATTTAAGAACCTCACA+TGG - chr4_2:53750554-53750573 None:intergenic 30.0%
! CTTAAATTTCATTGTCGGTT+TGG + chr4_2:53750563-53750582 Msa0607070:five_prime_UTR 30.0%
GAGTATACTACTAATTTGAG+AGG - chr4_2:53750625-53750644 None:intergenic 30.0%
AAAGCAGATCAATCAATACT+TGG - chr4_2:53750698-53750717 None:intergenic 30.0%
!! AGTATTGATTGATCTGCTTT+AGG + chr4_2:53750698-53750717 Msa0607070:five_prime_UTR 30.0%
!! TTTGTTGTCTTTTTGGTACT+AGG + chr4_2:53750776-53750795 Msa0607070:CDS 30.0%
GACTTATGGAAGAATTTCTT+TGG - chr4_2:53751007-53751026 None:intergenic 30.0%
TATTAGGTGAAGACATAAAG+TGG + chr4_2:53751093-53751112 Msa0607070:intron 30.0%
!! AGTAACTTGTTTGAAAAGTG+TGG + chr4_2:53751135-53751154 Msa0607070:intron 30.0%
GGATCTAGTTATTATAGCAT+AGG - chr4_2:53751176-53751195 None:intergenic 30.0%
! ACAAAAGAAGTACATGTATG+TGG + chr4_2:53751262-53751281 Msa0607070:intron 30.0%
!!! CTTGTGCATAATTTTTTTGC+AGG + chr4_2:53751370-53751389 Msa0607070:intron 30.0%
!!! TGGACATTTTAAAACAAGAG+GGG + chr4_2:53751426-53751445 Msa0607070:CDS 30.0%
! CTTTTACAATTTCTTGAGGA+AGG - chr4_2:53751489-53751508 None:intergenic 30.0%
! CCTTCTTTTACAATTTCTTG+AGG - chr4_2:53751493-53751512 None:intergenic 30.0%
CCTCAAGAAATTGTAAAAGA+AGG + chr4_2:53751490-53751509 Msa0607070:CDS 30.0%
! AAATGGTGGAAAAACTTTAG+GGG - chr4_2:53751761-53751780 None:intergenic 30.0%
! GAAATGGTGGAAAAACTTTA+GGG - chr4_2:53751762-53751781 None:intergenic 30.0%
TGTTTATGGAAAATCTTTGG+TGG - chr4_2:53751784-53751803 None:intergenic 30.0%
TAGATAGGAATATGAGGAAA+TGG - chr4_2:53751844-53751863 None:intergenic 30.0%
! GGGATAGGTTTTTCATATAT+AGG - chr4_2:53751922-53751941 None:intergenic 30.0%
!!! TTTTTTCATCACCCTAAGTA+TGG + chr4_2:53752549-53752568 Msa0607070:CDS 30.0%
! AAGAGGCTTTTTGGATTAAT+TGG - chr4_2:53752690-53752709 None:intergenic 30.0%
TGAAATTTAAGAACCTCACA+TGG - chr4_2:53750554-53750573 None:intergenic 30.0%
! CTTAAATTTCATTGTCGGTT+TGG + chr4_2:53750563-53750582 Msa0607070:five_prime_UTR 30.0%
GAGTATACTACTAATTTGAG+AGG - chr4_2:53750625-53750644 None:intergenic 30.0%
AAAGCAGATCAATCAATACT+TGG - chr4_2:53750698-53750717 None:intergenic 30.0%
!! AGTATTGATTGATCTGCTTT+AGG + chr4_2:53750698-53750717 Msa0607070:five_prime_UTR 30.0%
!! TTTGTTGTCTTTTTGGTACT+AGG + chr4_2:53750776-53750795 Msa0607070:CDS 30.0%
GACTTATGGAAGAATTTCTT+TGG - chr4_2:53751007-53751026 None:intergenic 30.0%
TATTAGGTGAAGACATAAAG+TGG + chr4_2:53751093-53751112 Msa0607070:intron 30.0%
!! AGTAACTTGTTTGAAAAGTG+TGG + chr4_2:53751135-53751154 Msa0607070:intron 30.0%
GGATCTAGTTATTATAGCAT+AGG - chr4_2:53751176-53751195 None:intergenic 30.0%
! ACAAAAGAAGTACATGTATG+TGG + chr4_2:53751262-53751281 Msa0607070:intron 30.0%
!!! CTTGTGCATAATTTTTTTGC+AGG + chr4_2:53751370-53751389 Msa0607070:intron 30.0%
!!! TGGACATTTTAAAACAAGAG+GGG + chr4_2:53751426-53751445 Msa0607070:CDS 30.0%
! CTTTTACAATTTCTTGAGGA+AGG - chr4_2:53751489-53751508 None:intergenic 30.0%
! CCTTCTTTTACAATTTCTTG+AGG - chr4_2:53751493-53751512 None:intergenic 30.0%
CCTCAAGAAATTGTAAAAGA+AGG + chr4_2:53751490-53751509 Msa0607070:CDS 30.0%
! AAATGGTGGAAAAACTTTAG+GGG - chr4_2:53751761-53751780 None:intergenic 30.0%
! GAAATGGTGGAAAAACTTTA+GGG - chr4_2:53751762-53751781 None:intergenic 30.0%
TGTTTATGGAAAATCTTTGG+TGG - chr4_2:53751784-53751803 None:intergenic 30.0%
TAGATAGGAATATGAGGAAA+TGG - chr4_2:53751844-53751863 None:intergenic 30.0%
! GGGATAGGTTTTTCATATAT+AGG - chr4_2:53751922-53751941 None:intergenic 30.0%
!!! TTTTTTCATCACCCTAAGTA+TGG + chr4_2:53752549-53752568 Msa0607070:CDS 30.0%
! AAGAGGCTTTTTGGATTAAT+TGG - chr4_2:53752690-53752709 None:intergenic 30.0%
!! ATTTCATTGTCGGTTTGGTT+TGG + chr4_2:53750568-53750587 Msa0607070:five_prime_UTR 35.0%
!!! TTGGCTGTTTGTTGTCTTTT+TGG + chr4_2:53750769-53750788 Msa0607070:CDS 35.0%
! TTGGTACTAGGTTTTTGCTA+TGG + chr4_2:53750788-53750807 Msa0607070:CDS 35.0%
ATAGTACAGTTGAGGTAGTT+GGG + chr4_2:53750819-53750838 Msa0607070:CDS 35.0%
! GAACAATATTAAGACTAGCC+AGG + chr4_2:53750868-53750887 Msa0607070:CDS 35.0%
! TCCATAAGTCATTTGAAGTG+TGG + chr4_2:53751017-53751036 Msa0607070:intron 35.0%
TCCACACTTCAAATGACTTA+TGG - chr4_2:53751021-53751040 None:intergenic 35.0%
! TGGACAGATGATAATGCATA+GGG + chr4_2:53751037-53751056 Msa0607070:intron 35.0%
ATTGACTGCAAAGAAGCAAA+TGG + chr4_2:53751406-53751425 Msa0607070:CDS 35.0%
!!! TGACAATTTTGGTGTTTTGC+AGG - chr4_2:53751585-53751604 None:intergenic 35.0%
! CATGTACCTCCAAATTCTTT+TGG + chr4_2:53751677-53751696 Msa0607070:CDS 35.0%
AAAAGAGGATGTTTGAAGAG+AGG - chr4_2:53751703-53751722 None:intergenic 35.0%
AATTGAGGTAAATCAGGATG+AGG - chr4_2:53751736-53751755 None:intergenic 35.0%
! AATGGTGGAAAAACTTTAGG+GGG - chr4_2:53751760-53751779 None:intergenic 35.0%
! GGAAATGGTGGAAAAACTTT+AGG - chr4_2:53751763-53751782 None:intergenic 35.0%
AAAATCTTTGGTGGAAATGG+TGG - chr4_2:53751775-53751794 None:intergenic 35.0%
TGGAAAATCTTTGGTGGAAA+TGG - chr4_2:53751778-53751797 None:intergenic 35.0%
GGGTGTTTATGGAAAATCTT+TGG - chr4_2:53751787-53751806 None:intergenic 35.0%
AATGGAGGTTTCTTGTAGAT+AGG - chr4_2:53751826-53751845 None:intergenic 35.0%
ATAGGAATATGAGGAAATGG+AGG - chr4_2:53751841-53751860 None:intergenic 35.0%
GGTTTGTAGATAGGAATATG+AGG - chr4_2:53751850-53751869 None:intergenic 35.0%
TAGATGGGAATATGAGGAAA+GGG - chr4_2:53751874-53751893 None:intergenic 35.0%
TTCTTGTAGATGGGAATATG+AGG - chr4_2:53751880-53751899 None:intergenic 35.0%
! TTTTCATATATAGGCACAGG+TGG - chr4_2:53751913-53751932 None:intergenic 35.0%
! GGTTTTTCATATATAGGCAC+AGG - chr4_2:53751916-53751935 None:intergenic 35.0%
GGAAGAGGTTTATGATATAC+AGG - chr4_2:53752087-53752106 None:intergenic 35.0%
ACTACTGGAGGCTTATATAT+TGG - chr4_2:53752384-53752403 None:intergenic 35.0%
GGTTTGTAAATTGGAACAAC+CGG - chr4_2:53752420-53752439 None:intergenic 35.0%
! ACAACTGGTGGTTTGTAAAT+TGG - chr4_2:53752429-53752448 None:intergenic 35.0%
TGATGAAAAAAGCTCTTTGG+AGG - chr4_2:53752540-53752559 None:intergenic 35.0%
ATCACCCTAAGTATGGAAAA+TGG + chr4_2:53752556-53752575 Msa0607070:CDS 35.0%
! ATTTTCCAAAATACTTGGGG+TGG - chr4_2:53752611-53752630 None:intergenic 35.0%
!! ACCCCAAGTATTTTGGAAAA+TGG + chr4_2:53752610-53752629 Msa0607070:CDS 35.0%
!! GCCATTTTCCAAAATACTTG+GGG - chr4_2:53752614-53752633 None:intergenic 35.0%
!! GGCCATTTTCCAAAATACTT+GGG - chr4_2:53752615-53752634 None:intergenic 35.0%
!! TGGCCATTTTCCAAAATACT+TGG - chr4_2:53752616-53752635 None:intergenic 35.0%
! AGGCTTTTTGGATTAATTGG+TGG - chr4_2:53752687-53752706 None:intergenic 35.0%
!! ATTTCATTGTCGGTTTGGTT+TGG + chr4_2:53750568-53750587 Msa0607070:five_prime_UTR 35.0%
!!! TTGGCTGTTTGTTGTCTTTT+TGG + chr4_2:53750769-53750788 Msa0607070:CDS 35.0%
! TTGGTACTAGGTTTTTGCTA+TGG + chr4_2:53750788-53750807 Msa0607070:CDS 35.0%
ATAGTACAGTTGAGGTAGTT+GGG + chr4_2:53750819-53750838 Msa0607070:CDS 35.0%
! GAACAATATTAAGACTAGCC+AGG + chr4_2:53750868-53750887 Msa0607070:CDS 35.0%
! TCCATAAGTCATTTGAAGTG+TGG + chr4_2:53751017-53751036 Msa0607070:intron 35.0%
TCCACACTTCAAATGACTTA+TGG - chr4_2:53751021-53751040 None:intergenic 35.0%
! TGGACAGATGATAATGCATA+GGG + chr4_2:53751037-53751056 Msa0607070:intron 35.0%
ATTGACTGCAAAGAAGCAAA+TGG + chr4_2:53751406-53751425 Msa0607070:CDS 35.0%
!!! TGACAATTTTGGTGTTTTGC+AGG - chr4_2:53751585-53751604 None:intergenic 35.0%
! CATGTACCTCCAAATTCTTT+TGG + chr4_2:53751677-53751696 Msa0607070:CDS 35.0%
AAAAGAGGATGTTTGAAGAG+AGG - chr4_2:53751703-53751722 None:intergenic 35.0%
AATTGAGGTAAATCAGGATG+AGG - chr4_2:53751736-53751755 None:intergenic 35.0%
! AATGGTGGAAAAACTTTAGG+GGG - chr4_2:53751760-53751779 None:intergenic 35.0%
! GGAAATGGTGGAAAAACTTT+AGG - chr4_2:53751763-53751782 None:intergenic 35.0%
AAAATCTTTGGTGGAAATGG+TGG - chr4_2:53751775-53751794 None:intergenic 35.0%
TGGAAAATCTTTGGTGGAAA+TGG - chr4_2:53751778-53751797 None:intergenic 35.0%
GGGTGTTTATGGAAAATCTT+TGG - chr4_2:53751787-53751806 None:intergenic 35.0%
AATGGAGGTTTCTTGTAGAT+AGG - chr4_2:53751826-53751845 None:intergenic 35.0%
ATAGGAATATGAGGAAATGG+AGG - chr4_2:53751841-53751860 None:intergenic 35.0%
GGTTTGTAGATAGGAATATG+AGG - chr4_2:53751850-53751869 None:intergenic 35.0%
TAGATGGGAATATGAGGAAA+GGG - chr4_2:53751874-53751893 None:intergenic 35.0%
TTCTTGTAGATGGGAATATG+AGG - chr4_2:53751880-53751899 None:intergenic 35.0%
! TTTTCATATATAGGCACAGG+TGG - chr4_2:53751913-53751932 None:intergenic 35.0%
! GGTTTTTCATATATAGGCAC+AGG - chr4_2:53751916-53751935 None:intergenic 35.0%
GGAAGAGGTTTATGATATAC+AGG - chr4_2:53752087-53752106 None:intergenic 35.0%
ACTACTGGAGGCTTATATAT+TGG - chr4_2:53752384-53752403 None:intergenic 35.0%
GGTTTGTAAATTGGAACAAC+CGG - chr4_2:53752420-53752439 None:intergenic 35.0%
! ACAACTGGTGGTTTGTAAAT+TGG - chr4_2:53752429-53752448 None:intergenic 35.0%
TGATGAAAAAAGCTCTTTGG+AGG - chr4_2:53752540-53752559 None:intergenic 35.0%
ATCACCCTAAGTATGGAAAA+TGG + chr4_2:53752556-53752575 Msa0607070:CDS 35.0%
! ATTTTCCAAAATACTTGGGG+TGG - chr4_2:53752611-53752630 None:intergenic 35.0%
!! ACCCCAAGTATTTTGGAAAA+TGG + chr4_2:53752610-53752629 Msa0607070:CDS 35.0%
!! GCCATTTTCCAAAATACTTG+GGG - chr4_2:53752614-53752633 None:intergenic 35.0%
!! GGCCATTTTCCAAAATACTT+GGG - chr4_2:53752615-53752634 None:intergenic 35.0%
!! TGGCCATTTTCCAAAATACT+TGG - chr4_2:53752616-53752635 None:intergenic 35.0%
! AGGCTTTTTGGATTAATTGG+TGG - chr4_2:53752687-53752706 None:intergenic 35.0%
AAGAACCTCACATGGTTCAA+AGG - chr4_2:53750546-53750565 None:intergenic 40.0%
GAGAAGCTACTAAGCTTCTT+TGG - chr4_2:53750668-53750687 None:intergenic 40.0%
!! AAGAGCACAAAAGTGCTCTT+TGG - chr4_2:53750751-53750770 None:intergenic 40.0%
!!! AAAGAGCACTTTTGTGCTCT+TGG + chr4_2:53750750-53750769 Msa0607070:CDS 40.0%
!! GTACTAGGTTTTTGCTATGG+TGG + chr4_2:53750791-53750810 Msa0607070:CDS 40.0%
CAACTACCTCAACTGTACTA+TGG - chr4_2:53750820-53750839 None:intergenic 40.0%
CATAGTACAGTTGAGGTAGT+TGG + chr4_2:53750818-53750837 Msa0607070:CDS 40.0%
! GTGGACAGATGATAATGCAT+AGG + chr4_2:53751036-53751055 Msa0607070:intron 40.0%
!!! CATTTTAAAACAAGAGGGGC+AGG + chr4_2:53751430-53751449 Msa0607070:CDS 40.0%
GCAGGTGAGCTTGATAAAAA+AGG + chr4_2:53751448-53751467 Msa0607070:CDS 40.0%
GAAGAGAGGCCAAAAGAATT+TGG - chr4_2:53751689-53751708 None:intergenic 40.0%
TGAGGATGCTTAGGAAAAAG+AGG - chr4_2:53751718-53751737 None:intergenic 40.0%
AAATCAGGATGAGGATGCTT+AGG - chr4_2:53751727-53751746 None:intergenic 40.0%
! AAAACTTTAGGGGGGAATTG+AGG - chr4_2:53751751-53751770 None:intergenic 40.0%
! ATGGTGGAAAAACTTTAGGG+GGG - chr4_2:53751759-53751778 None:intergenic 40.0%
!! GAGGAAAAAGAGGGTGTTTA+TGG - chr4_2:53751798-53751817 None:intergenic 40.0%
TAGGAACAGGAGGAAAAAGA+GGG - chr4_2:53751807-53751826 None:intergenic 40.0%
ATAGGAACAGGAGGAAAAAG+AGG - chr4_2:53751808-53751827 None:intergenic 40.0%
TTCTTGTAGATAGGAACAGG+AGG - chr4_2:53751817-53751836 None:intergenic 40.0%
GGTTTCTTGTAGATAGGAAC+AGG - chr4_2:53751820-53751839 None:intergenic 40.0%
GTAGATGGGAATATGAGGAA+AGG - chr4_2:53751875-53751894 None:intergenic 40.0%
TTCTCATAAACAGGTGTAGG+AGG - chr4_2:53751946-53751965 None:intergenic 40.0%
GGTTTCTCATAAACAGGTGT+AGG - chr4_2:53751949-53751968 None:intergenic 40.0%
GGAAGAGGTTTCTCATAAAC+AGG - chr4_2:53751955-53751974 None:intergenic 40.0%
TTATGATATACAGGCGTAGG+TGG - chr4_2:53752078-53752097 None:intergenic 40.0%
GGTTTATGATATACAGGCGT+AGG - chr4_2:53752081-53752100 None:intergenic 40.0%
AAAACTGGATGCTCAACCTT+TGG - chr4_2:53752249-53752268 None:intergenic 40.0%
TGGAGGTTTGTATACTGGAA+CGG - chr4_2:53752277-53752296 None:intergenic 40.0%
GGCTTATATATTGGAACAGG+TGG - chr4_2:53752375-53752394 None:intergenic 40.0%
GGAGGCTTATATATTGGAAC+AGG - chr4_2:53752378-53752397 None:intergenic 40.0%
AGTAGTAATTCCAAAGCCAC+CGG + chr4_2:53752398-53752417 Msa0607070:CDS 40.0%
TTGTAAATTGGAACAACCGG+TGG - chr4_2:53752417-53752436 None:intergenic 40.0%
TTGAATGGAGGAAGAACAAC+TGG - chr4_2:53752444-53752463 None:intergenic 40.0%
TGATGGAAAAAGCTCTTTGG+AGG - chr4_2:53752498-53752517 None:intergenic 40.0%
! TTTTTCCATCACCCCAAGTT+TGG + chr4_2:53752507-53752526 Msa0607070:CDS 40.0%
! ATTTTCCAAACTTGGGGTGA+TGG - chr4_2:53752515-53752534 None:intergenic 40.0%
! GAGGCAATTTTCCAAACTTG+GGG - chr4_2:53752521-53752540 None:intergenic 40.0%
! GGAGGCAATTTTCCAAACTT+GGG - chr4_2:53752522-53752541 None:intergenic 40.0%
! TGGAGGCAATTTTCCAAACT+TGG - chr4_2:53752523-53752542 None:intergenic 40.0%
GGGTGATGAAAAAAGCTCTT+TGG - chr4_2:53752543-53752562 None:intergenic 40.0%
!! GAGGCCATTTTCCATACTTA+GGG - chr4_2:53752563-53752582 None:intergenic 40.0%
AAGAAGCTCTTATGAGGGAT+TGG - chr4_2:53752639-53752658 None:intergenic 40.0%
GATGGAAGAAGCTCTTATGA+GGG - chr4_2:53752644-53752663 None:intergenic 40.0%
TGATGGAAGAAGCTCTTATG+AGG - chr4_2:53752645-53752664 None:intergenic 40.0%
TTCTTCCATCACCCAAAGTT+TGG + chr4_2:53752654-53752673 Msa0607070:CDS 40.0%
ACTTTCCAAACTTTGGGTGA+TGG - chr4_2:53752662-53752681 None:intergenic 40.0%
ATCACCCAAAGTTTGGAAAG+TGG + chr4_2:53752661-53752680 Msa0607070:CDS 40.0%
AAGAACCTCACATGGTTCAA+AGG - chr4_2:53750546-53750565 None:intergenic 40.0%
GAGAAGCTACTAAGCTTCTT+TGG - chr4_2:53750668-53750687 None:intergenic 40.0%
!! AAGAGCACAAAAGTGCTCTT+TGG - chr4_2:53750751-53750770 None:intergenic 40.0%
!!! AAAGAGCACTTTTGTGCTCT+TGG + chr4_2:53750750-53750769 Msa0607070:CDS 40.0%
!! GTACTAGGTTTTTGCTATGG+TGG + chr4_2:53750791-53750810 Msa0607070:CDS 40.0%
CAACTACCTCAACTGTACTA+TGG - chr4_2:53750820-53750839 None:intergenic 40.0%
CATAGTACAGTTGAGGTAGT+TGG + chr4_2:53750818-53750837 Msa0607070:CDS 40.0%
! GTGGACAGATGATAATGCAT+AGG + chr4_2:53751036-53751055 Msa0607070:intron 40.0%
!!! CATTTTAAAACAAGAGGGGC+AGG + chr4_2:53751430-53751449 Msa0607070:CDS 40.0%
GCAGGTGAGCTTGATAAAAA+AGG + chr4_2:53751448-53751467 Msa0607070:CDS 40.0%
GAAGAGAGGCCAAAAGAATT+TGG - chr4_2:53751689-53751708 None:intergenic 40.0%
TGAGGATGCTTAGGAAAAAG+AGG - chr4_2:53751718-53751737 None:intergenic 40.0%
AAATCAGGATGAGGATGCTT+AGG - chr4_2:53751727-53751746 None:intergenic 40.0%
! AAAACTTTAGGGGGGAATTG+AGG - chr4_2:53751751-53751770 None:intergenic 40.0%
! ATGGTGGAAAAACTTTAGGG+GGG - chr4_2:53751759-53751778 None:intergenic 40.0%
!! GAGGAAAAAGAGGGTGTTTA+TGG - chr4_2:53751798-53751817 None:intergenic 40.0%
TAGGAACAGGAGGAAAAAGA+GGG - chr4_2:53751807-53751826 None:intergenic 40.0%
ATAGGAACAGGAGGAAAAAG+AGG - chr4_2:53751808-53751827 None:intergenic 40.0%
TTCTTGTAGATAGGAACAGG+AGG - chr4_2:53751817-53751836 None:intergenic 40.0%
GGTTTCTTGTAGATAGGAAC+AGG - chr4_2:53751820-53751839 None:intergenic 40.0%
GTAGATGGGAATATGAGGAA+AGG - chr4_2:53751875-53751894 None:intergenic 40.0%
TTCTCATAAACAGGTGTAGG+AGG - chr4_2:53751946-53751965 None:intergenic 40.0%
GGTTTCTCATAAACAGGTGT+AGG - chr4_2:53751949-53751968 None:intergenic 40.0%
GGAAGAGGTTTCTCATAAAC+AGG - chr4_2:53751955-53751974 None:intergenic 40.0%
TTATGATATACAGGCGTAGG+TGG - chr4_2:53752078-53752097 None:intergenic 40.0%
GGTTTATGATATACAGGCGT+AGG - chr4_2:53752081-53752100 None:intergenic 40.0%
AAAACTGGATGCTCAACCTT+TGG - chr4_2:53752249-53752268 None:intergenic 40.0%
TGGAGGTTTGTATACTGGAA+CGG - chr4_2:53752277-53752296 None:intergenic 40.0%
GGCTTATATATTGGAACAGG+TGG - chr4_2:53752375-53752394 None:intergenic 40.0%
GGAGGCTTATATATTGGAAC+AGG - chr4_2:53752378-53752397 None:intergenic 40.0%
AGTAGTAATTCCAAAGCCAC+CGG + chr4_2:53752398-53752417 Msa0607070:CDS 40.0%
TTGTAAATTGGAACAACCGG+TGG - chr4_2:53752417-53752436 None:intergenic 40.0%
TTGAATGGAGGAAGAACAAC+TGG - chr4_2:53752444-53752463 None:intergenic 40.0%
TGATGGAAAAAGCTCTTTGG+AGG - chr4_2:53752498-53752517 None:intergenic 40.0%
! TTTTTCCATCACCCCAAGTT+TGG + chr4_2:53752507-53752526 Msa0607070:CDS 40.0%
! ATTTTCCAAACTTGGGGTGA+TGG - chr4_2:53752515-53752534 None:intergenic 40.0%
! GAGGCAATTTTCCAAACTTG+GGG - chr4_2:53752521-53752540 None:intergenic 40.0%
! GGAGGCAATTTTCCAAACTT+GGG - chr4_2:53752522-53752541 None:intergenic 40.0%
! TGGAGGCAATTTTCCAAACT+TGG - chr4_2:53752523-53752542 None:intergenic 40.0%
GGGTGATGAAAAAAGCTCTT+TGG - chr4_2:53752543-53752562 None:intergenic 40.0%
!! GAGGCCATTTTCCATACTTA+GGG - chr4_2:53752563-53752582 None:intergenic 40.0%
AAGAAGCTCTTATGAGGGAT+TGG - chr4_2:53752639-53752658 None:intergenic 40.0%
GATGGAAGAAGCTCTTATGA+GGG - chr4_2:53752644-53752663 None:intergenic 40.0%
TGATGGAAGAAGCTCTTATG+AGG - chr4_2:53752645-53752664 None:intergenic 40.0%
TTCTTCCATCACCCAAAGTT+TGG + chr4_2:53752654-53752673 Msa0607070:CDS 40.0%
ACTTTCCAAACTTTGGGTGA+TGG - chr4_2:53752662-53752681 None:intergenic 40.0%
ATCACCCAAAGTTTGGAAAG+TGG + chr4_2:53752661-53752680 Msa0607070:CDS 40.0%
AACCTCACATGGTTCAAAGG+TGG - chr4_2:53750543-53750562 None:intergenic 45.0%
TGGAGACCATAGTACAGTTG+AGG + chr4_2:53750811-53750830 Msa0607070:CDS 45.0%
! ACAAAGTACCTGAGAAAGCC+TGG - chr4_2:53750889-53750908 None:intergenic 45.0%
GAGAGGCCAAAAGAATTTGG+AGG - chr4_2:53751686-53751705 None:intergenic 45.0%
GGAAAGGGAGGTTTGTAGAT+AGG - chr4_2:53751859-53751878 None:intergenic 45.0%
ATGGGAATATGAGGAAAGGG+AGG - chr4_2:53751871-53751890 None:intergenic 45.0%
GGGCAAGGTTTCTTGTAGAT+GGG - chr4_2:53751889-53751908 None:intergenic 45.0%
AGGGCAAGGTTTCTTGTAGA+TGG - chr4_2:53751890-53751909 None:intergenic 45.0%
CATATATAGGCACAGGTGGA+GGG - chr4_2:53751909-53751928 None:intergenic 45.0%
TCATATATAGGCACAGGTGG+AGG - chr4_2:53751910-53751929 None:intergenic 45.0%
CATAAACAGGTGTAGGAGGA+GGG - chr4_2:53751942-53751961 None:intergenic 45.0%
TCATAAACAGGTGTAGGAGG+AGG - chr4_2:53751943-53751962 None:intergenic 45.0%
TTCTCATAGACAGGTGTAGG+TGG - chr4_2:53751979-53751998 None:intergenic 45.0%
GGTTTCTCATAGACAGGTGT+AGG - chr4_2:53751982-53752001 None:intergenic 45.0%
GGAAGAGGTTTCTCATAGAC+AGG - chr4_2:53751988-53752007 None:intergenic 45.0%
TTATGGTAAACAGGCACAGG+CGG - chr4_2:53752012-53752031 None:intergenic 45.0%
GGTTTATGGTAAACAGGCAC+AGG - chr4_2:53752015-53752034 None:intergenic 45.0%
GGGAGAGGTTTATGGTAAAC+AGG - chr4_2:53752021-53752040 None:intergenic 45.0%
TTCTCATACACAGGTGTAGG+TGG - chr4_2:53752045-53752064 None:intergenic 45.0%
GGTTTCTCATACACAGGTGT+AGG - chr4_2:53752048-53752067 None:intergenic 45.0%
GGAAGAGGTTTCTCATACAC+AGG - chr4_2:53752054-53752073 None:intergenic 45.0%
CATGGTTTCTTGACTGGAAC+AGG - chr4_2:53752114-53752133 None:intergenic 45.0%
ACTGGATGTTCAACCTTTGG+TGG - chr4_2:53752141-53752160 None:intergenic 45.0%
GGAACTGGATGTTCAACCTT+TGG - chr4_2:53752144-53752163 None:intergenic 45.0%
TCCAGTATACAAACCTCCTC+CGG + chr4_2:53752173-53752192 Msa0607070:CDS 45.0%
GGAGGTTTGTATACTGGAAC+GGG - chr4_2:53752276-53752295 None:intergenic 45.0%
TCCAGTATACAAACCTCCAC+CGG + chr4_2:53752278-53752297 Msa0607070:CDS 45.0%
GTGGACATGGTTTCTTGATC+GGG - chr4_2:53752329-53752348 None:intergenic 45.0%
GGTGGACATGGTTTCTTGAT+CGG - chr4_2:53752330-53752349 None:intergenic 45.0%
! TGCTCAATCTTTGGTGGACA+TGG - chr4_2:53752342-53752361 None:intergenic 45.0%
AGAACTGGGTGCTCAATCTT+TGG - chr4_2:53752351-53752370 None:intergenic 45.0%
TTGGAACAGGTGGTAGAACT+GGG - chr4_2:53752365-53752384 None:intergenic 45.0%
ATTGGAACAGGTGGTAGAAC+TGG - chr4_2:53752366-53752385 None:intergenic 45.0%
!! GGCTTTGGAATTACTACTGG+AGG - chr4_2:53752396-53752415 None:intergenic 45.0%
!! GGTGGCTTTGGAATTACTAC+TGG - chr4_2:53752399-53752418 None:intergenic 45.0%
AATGGAGGAAGAACAACTGG+TGG - chr4_2:53752441-53752460 None:intergenic 45.0%
CATGGTGGTTTCTTGAATGG+AGG - chr4_2:53752456-53752475 None:intergenic 45.0%
GGACATGGTGGTTTCTTGAA+TGG - chr4_2:53752459-53752478 None:intergenic 45.0%
!! GGGTGATGGAAAAAGCTCTT+TGG - chr4_2:53752501-53752520 None:intergenic 45.0%
!! GGAGGCCATTTTCCATACTT+AGG - chr4_2:53752564-53752583 None:intergenic 45.0%
! AAGAAGCTCTTTGGAGGCAA+TGG - chr4_2:53752585-53752604 None:intergenic 45.0%
! TTCCACCACCCCAAGTATTT+TGG + chr4_2:53752603-53752622 Msa0607070:CDS 45.0%
TTCCAAAATACTTGGGGTGG+TGG - chr4_2:53752608-53752627 None:intergenic 45.0%
AAGCTCTTATGAGGGATTGG+TGG - chr4_2:53752636-53752655 None:intergenic 45.0%
! GTGGCCACTTTCCAAACTTT+GGG - chr4_2:53752668-53752687 None:intergenic 45.0%
ATGATCCAAACTTGGGGTGA+TGG - chr4_2:53752713-53752732 None:intergenic 45.0%
ATCACCCCAAGTTTGGATCA+TGG + chr4_2:53752712-53752731 Msa0607070:CDS 45.0%
AACCTCACATGGTTCAAAGG+TGG - chr4_2:53750543-53750562 None:intergenic 45.0%
TGGAGACCATAGTACAGTTG+AGG + chr4_2:53750811-53750830 Msa0607070:CDS 45.0%
! ACAAAGTACCTGAGAAAGCC+TGG - chr4_2:53750889-53750908 None:intergenic 45.0%
GAGAGGCCAAAAGAATTTGG+AGG - chr4_2:53751686-53751705 None:intergenic 45.0%
GGAAAGGGAGGTTTGTAGAT+AGG - chr4_2:53751859-53751878 None:intergenic 45.0%
ATGGGAATATGAGGAAAGGG+AGG - chr4_2:53751871-53751890 None:intergenic 45.0%
GGGCAAGGTTTCTTGTAGAT+GGG - chr4_2:53751889-53751908 None:intergenic 45.0%
AGGGCAAGGTTTCTTGTAGA+TGG - chr4_2:53751890-53751909 None:intergenic 45.0%
CATATATAGGCACAGGTGGA+GGG - chr4_2:53751909-53751928 None:intergenic 45.0%
TCATATATAGGCACAGGTGG+AGG - chr4_2:53751910-53751929 None:intergenic 45.0%
CATAAACAGGTGTAGGAGGA+GGG - chr4_2:53751942-53751961 None:intergenic 45.0%
TCATAAACAGGTGTAGGAGG+AGG - chr4_2:53751943-53751962 None:intergenic 45.0%
TTCTCATAGACAGGTGTAGG+TGG - chr4_2:53751979-53751998 None:intergenic 45.0%
GGTTTCTCATAGACAGGTGT+AGG - chr4_2:53751982-53752001 None:intergenic 45.0%
GGAAGAGGTTTCTCATAGAC+AGG - chr4_2:53751988-53752007 None:intergenic 45.0%
TTATGGTAAACAGGCACAGG+CGG - chr4_2:53752012-53752031 None:intergenic 45.0%
GGTTTATGGTAAACAGGCAC+AGG - chr4_2:53752015-53752034 None:intergenic 45.0%
GGGAGAGGTTTATGGTAAAC+AGG - chr4_2:53752021-53752040 None:intergenic 45.0%
TTCTCATACACAGGTGTAGG+TGG - chr4_2:53752045-53752064 None:intergenic 45.0%
GGTTTCTCATACACAGGTGT+AGG - chr4_2:53752048-53752067 None:intergenic 45.0%
GGAAGAGGTTTCTCATACAC+AGG - chr4_2:53752054-53752073 None:intergenic 45.0%
CATGGTTTCTTGACTGGAAC+AGG - chr4_2:53752114-53752133 None:intergenic 45.0%
ACTGGATGTTCAACCTTTGG+TGG - chr4_2:53752141-53752160 None:intergenic 45.0%
GGAACTGGATGTTCAACCTT+TGG - chr4_2:53752144-53752163 None:intergenic 45.0%
TCCAGTATACAAACCTCCTC+CGG + chr4_2:53752173-53752192 Msa0607070:CDS 45.0%
GGAGGTTTGTATACTGGAAC+GGG - chr4_2:53752276-53752295 None:intergenic 45.0%
TCCAGTATACAAACCTCCAC+CGG + chr4_2:53752278-53752297 Msa0607070:CDS 45.0%
GTGGACATGGTTTCTTGATC+GGG - chr4_2:53752329-53752348 None:intergenic 45.0%
GGTGGACATGGTTTCTTGAT+CGG - chr4_2:53752330-53752349 None:intergenic 45.0%
! TGCTCAATCTTTGGTGGACA+TGG - chr4_2:53752342-53752361 None:intergenic 45.0%
AGAACTGGGTGCTCAATCTT+TGG - chr4_2:53752351-53752370 None:intergenic 45.0%
TTGGAACAGGTGGTAGAACT+GGG - chr4_2:53752365-53752384 None:intergenic 45.0%
ATTGGAACAGGTGGTAGAAC+TGG - chr4_2:53752366-53752385 None:intergenic 45.0%
!! GGCTTTGGAATTACTACTGG+AGG - chr4_2:53752396-53752415 None:intergenic 45.0%
!! GGTGGCTTTGGAATTACTAC+TGG - chr4_2:53752399-53752418 None:intergenic 45.0%
AATGGAGGAAGAACAACTGG+TGG - chr4_2:53752441-53752460 None:intergenic 45.0%
CATGGTGGTTTCTTGAATGG+AGG - chr4_2:53752456-53752475 None:intergenic 45.0%
GGACATGGTGGTTTCTTGAA+TGG - chr4_2:53752459-53752478 None:intergenic 45.0%
!! GGGTGATGGAAAAAGCTCTT+TGG - chr4_2:53752501-53752520 None:intergenic 45.0%
!! GGAGGCCATTTTCCATACTT+AGG - chr4_2:53752564-53752583 None:intergenic 45.0%
! AAGAAGCTCTTTGGAGGCAA+TGG - chr4_2:53752585-53752604 None:intergenic 45.0%
! TTCCACCACCCCAAGTATTT+TGG + chr4_2:53752603-53752622 Msa0607070:CDS 45.0%
TTCCAAAATACTTGGGGTGG+TGG - chr4_2:53752608-53752627 None:intergenic 45.0%
AAGCTCTTATGAGGGATTGG+TGG - chr4_2:53752636-53752655 None:intergenic 45.0%
! GTGGCCACTTTCCAAACTTT+GGG - chr4_2:53752668-53752687 None:intergenic 45.0%
ATGATCCAAACTTGGGGTGA+TGG - chr4_2:53752713-53752732 None:intergenic 45.0%
ATCACCCCAAGTTTGGATCA+TGG + chr4_2:53752712-53752731 Msa0607070:CDS 45.0%
GTCCACCTTTGAACCATGTG+AGG + chr4_2:53750538-53750557 Msa0607070:five_prime_UTR 50.0%
ACAGTTGAGGTAGTTGGGCT+TGG + chr4_2:53750824-53750843 Msa0607070:CDS 50.0%
! AAGACTAGCCAGGCTTTCTC+AGG + chr4_2:53750878-53750897 Msa0607070:CDS 50.0%
! TTTTGCAGGCCATCATGAGC+AGG - chr4_2:53751571-53751590 None:intergenic 50.0%
ACCAGCAGCAGCAGTACTTA+GGG - chr4_2:53751635-53751654 None:intergenic 50.0%
TACCAGCAGCAGCAGTACTT+AGG - chr4_2:53751636-53751655 None:intergenic 50.0%
GGGGGGAATTGAGGTAAATC+AGG - chr4_2:53751742-53751761 None:intergenic 50.0%
TCATAGACAGGTGTAGGTGG+AGG - chr4_2:53751976-53751995 None:intergenic 50.0%
TAGGTGGAGGGAGAGGTTTA+TGG - chr4_2:53752029-53752048 None:intergenic 50.0%
CATACACAGGTGTAGGTGGA+GGG - chr4_2:53752041-53752060 None:intergenic 50.0%
TCATACACAGGTGTAGGTGG+AGG - chr4_2:53752042-53752061 None:intergenic 50.0%
TGATATACAGGCGTAGGTGG+AGG - chr4_2:53752075-53752094 None:intergenic 50.0%
TTCTTGACTGGAACAGGAGG+AGG - chr4_2:53752108-53752127 None:intergenic 50.0%
GGTTTCTTGACTGGAACAGG+AGG - chr4_2:53752111-53752130 None:intergenic 50.0%
GGTGGACATGGTTTCTTGAC+TGG - chr4_2:53752120-53752139 None:intergenic 50.0%
GAAACCATGTCCACCACCAA+AGG + chr4_2:53752125-53752144 Msa0607070:CDS 50.0%
!! TCAACCTTTGGTGGTGGACA+TGG - chr4_2:53752132-53752151 None:intergenic 50.0%
GGATGTTCAACCTTTGGTGG+TGG - chr4_2:53752138-53752157 None:intergenic 50.0%
TTGTATACTGGAGCAGGTGG+TGG - chr4_2:53752165-53752184 None:intergenic 50.0%
GGTTTGTATACTGGAGCAGG+TGG - chr4_2:53752168-53752187 None:intergenic 50.0%
GGAGGTTTGTATACTGGAGC+AGG - chr4_2:53752171-53752190 None:intergenic 50.0%
ACCGGAGGAGGTTTGTATAC+TGG - chr4_2:53752177-53752196 None:intergenic 50.0%
CATGGTTTCTTGACCGGAAC+CGG - chr4_2:53752219-53752238 None:intergenic 50.0%
GGTGGACATGGTTTCTTGAC+CGG - chr4_2:53752120-53752139 None:intergenic 50.0%
GAAACCATGTCCACCACCAA+AGG + chr4_2:53752125-53752144 Msa0607070:CDS 50.0%
!! TCAACCTTTGGTGGTGGACA+TGG - chr4_2:53752132-53752151 None:intergenic 50.0%
ACTGGATGCTCAACCTTTGG+TGG - chr4_2:53752246-53752265 None:intergenic 50.0%
ACTGGAACGGGTGGTAAAAC+TGG - chr4_2:53752264-53752283 None:intergenic 50.0%
GGTTTGTATACTGGAACGGG+TGG - chr4_2:53752273-53752292 None:intergenic 50.0%
ACCGGTGGAGGTTTGTATAC+TGG - chr4_2:53752282-53752301 None:intergenic 50.0%
CATGGTTTCTTGATCGGGAC+TGG - chr4_2:53752324-53752343 None:intergenic 50.0%
ACTGGGTGCTCAATCTTTGG+TGG - chr4_2:53752348-53752367 None:intergenic 50.0%
ATTGGAACAACCGGTGGCTT+TGG - chr4_2:53752411-53752430 None:intergenic 50.0%
AGAGTTGGAAGAGGTGGACA+TGG - chr4_2:53752474-53752493 None:intergenic 50.0%
TTTGGAGGCAGAGTTGGAAG+AGG - chr4_2:53752483-53752502 None:intergenic 50.0%
! AAGCTCTTTGGAGGCAGAGT+TGG - chr4_2:53752489-53752508 None:intergenic 50.0%
! AAGCTCTTTGGAGGCAATGG+AGG - chr4_2:53752582-53752601 None:intergenic 50.0%
TGGTGGAAGAAGCTCTTTGG+AGG - chr4_2:53752591-53752610 None:intergenic 50.0%
! GGTGGCCACTTTCCAAACTT+TGG - chr4_2:53752669-53752688 None:intergenic 50.0%
!!! GGGTGATGGAAGAGGCTTTT+TGG - chr4_2:53752699-53752718 None:intergenic 50.0%
!! CAAACTTGGGGTGATGGAAG+AGG - chr4_2:53752707-53752726 None:intergenic 50.0%
CTCTTCCATCACCCCAAGTT+TGG + chr4_2:53752705-53752724 Msa0607070:CDS 50.0%
GAGGCCATGATCCAAACTTG+GGG - chr4_2:53752719-53752738 None:intergenic 50.0%
GGAGGCCATGATCCAAACTT+GGG - chr4_2:53752720-53752739 None:intergenic 50.0%
TGGAGGCCATGATCCAAACT+TGG - chr4_2:53752721-53752740 None:intergenic 50.0%
GTCCACCTTTGAACCATGTG+AGG + chr4_2:53750538-53750557 Msa0607070:five_prime_UTR 50.0%
ACAGTTGAGGTAGTTGGGCT+TGG + chr4_2:53750824-53750843 Msa0607070:CDS 50.0%
! AAGACTAGCCAGGCTTTCTC+AGG + chr4_2:53750878-53750897 Msa0607070:CDS 50.0%
! TTTTGCAGGCCATCATGAGC+AGG - chr4_2:53751571-53751590 None:intergenic 50.0%
ACCAGCAGCAGCAGTACTTA+GGG - chr4_2:53751635-53751654 None:intergenic 50.0%
TACCAGCAGCAGCAGTACTT+AGG - chr4_2:53751636-53751655 None:intergenic 50.0%
GGGGGGAATTGAGGTAAATC+AGG - chr4_2:53751742-53751761 None:intergenic 50.0%
TCATAGACAGGTGTAGGTGG+AGG - chr4_2:53751976-53751995 None:intergenic 50.0%
TAGGTGGAGGGAGAGGTTTA+TGG - chr4_2:53752029-53752048 None:intergenic 50.0%
CATACACAGGTGTAGGTGGA+GGG - chr4_2:53752041-53752060 None:intergenic 50.0%
TCATACACAGGTGTAGGTGG+AGG - chr4_2:53752042-53752061 None:intergenic 50.0%
TGATATACAGGCGTAGGTGG+AGG - chr4_2:53752075-53752094 None:intergenic 50.0%
TTCTTGACTGGAACAGGAGG+AGG - chr4_2:53752108-53752127 None:intergenic 50.0%
GGTTTCTTGACTGGAACAGG+AGG - chr4_2:53752111-53752130 None:intergenic 50.0%
GGTGGACATGGTTTCTTGAC+TGG - chr4_2:53752120-53752139 None:intergenic 50.0%
GAAACCATGTCCACCACCAA+AGG + chr4_2:53752125-53752144 Msa0607070:CDS 50.0%
!! TCAACCTTTGGTGGTGGACA+TGG - chr4_2:53752132-53752151 None:intergenic 50.0%
GGATGTTCAACCTTTGGTGG+TGG - chr4_2:53752138-53752157 None:intergenic 50.0%
TTGTATACTGGAGCAGGTGG+TGG - chr4_2:53752165-53752184 None:intergenic 50.0%
GGTTTGTATACTGGAGCAGG+TGG - chr4_2:53752168-53752187 None:intergenic 50.0%
GGAGGTTTGTATACTGGAGC+AGG - chr4_2:53752171-53752190 None:intergenic 50.0%
ACCGGAGGAGGTTTGTATAC+TGG - chr4_2:53752177-53752196 None:intergenic 50.0%
CATGGTTTCTTGACCGGAAC+CGG - chr4_2:53752219-53752238 None:intergenic 50.0%
GGTGGACATGGTTTCTTGAC+CGG - chr4_2:53752120-53752139 None:intergenic 50.0%
GAAACCATGTCCACCACCAA+AGG + chr4_2:53752125-53752144 Msa0607070:CDS 50.0%
!! TCAACCTTTGGTGGTGGACA+TGG - chr4_2:53752132-53752151 None:intergenic 50.0%
ACTGGATGCTCAACCTTTGG+TGG - chr4_2:53752246-53752265 None:intergenic 50.0%
ACTGGAACGGGTGGTAAAAC+TGG - chr4_2:53752264-53752283 None:intergenic 50.0%
GGTTTGTATACTGGAACGGG+TGG - chr4_2:53752273-53752292 None:intergenic 50.0%
ACCGGTGGAGGTTTGTATAC+TGG - chr4_2:53752282-53752301 None:intergenic 50.0%
CATGGTTTCTTGATCGGGAC+TGG - chr4_2:53752324-53752343 None:intergenic 50.0%
ACTGGGTGCTCAATCTTTGG+TGG - chr4_2:53752348-53752367 None:intergenic 50.0%
ATTGGAACAACCGGTGGCTT+TGG - chr4_2:53752411-53752430 None:intergenic 50.0%
AGAGTTGGAAGAGGTGGACA+TGG - chr4_2:53752474-53752493 None:intergenic 50.0%
TTTGGAGGCAGAGTTGGAAG+AGG - chr4_2:53752483-53752502 None:intergenic 50.0%
! AAGCTCTTTGGAGGCAGAGT+TGG - chr4_2:53752489-53752508 None:intergenic 50.0%
! AAGCTCTTTGGAGGCAATGG+AGG - chr4_2:53752582-53752601 None:intergenic 50.0%
TGGTGGAAGAAGCTCTTTGG+AGG - chr4_2:53752591-53752610 None:intergenic 50.0%
! GGTGGCCACTTTCCAAACTT+TGG - chr4_2:53752669-53752688 None:intergenic 50.0%
!!! GGGTGATGGAAGAGGCTTTT+TGG - chr4_2:53752699-53752718 None:intergenic 50.0%
!! CAAACTTGGGGTGATGGAAG+AGG - chr4_2:53752707-53752726 None:intergenic 50.0%
CTCTTCCATCACCCCAAGTT+TGG + chr4_2:53752705-53752724 Msa0607070:CDS 50.0%
GAGGCCATGATCCAAACTTG+GGG - chr4_2:53752719-53752738 None:intergenic 50.0%
GGAGGCCATGATCCAAACTT+GGG - chr4_2:53752720-53752739 None:intergenic 50.0%
TGGAGGCCATGATCCAAACT+TGG - chr4_2:53752721-53752740 None:intergenic 50.0%
GCACCTTGTCCTGCTCATGA+TGG + chr4_2:53751559-53751578 Msa0607070:CDS 55.0%
AGGCCATCATGAGCAGGACA+AGG - chr4_2:53751565-53751584 None:intergenic 55.0%
! ACCCTAAGTACTGCTGCTGC+TGG + chr4_2:53751631-53751650 Msa0607070:CDS 55.0%
ACAGGTGTAGGAGGAGGGAT+AGG - chr4_2:53751937-53751956 None:intergenic 55.0%
ACAGGTGTAGGTGGAGGAAG+AGG - chr4_2:53751970-53751989 None:intergenic 55.0%
ACTGGAACAGGAGGAGGAAG+AGG - chr4_2:53752102-53752121 None:intergenic 55.0%
!! GGTGGTTGTGGCTTTGGAAC+CGG - chr4_2:53752195-53752214 None:intergenic 55.0%
TCCAAAGCCACAACCACCAC+CGG + chr4_2:53752197-53752216 Msa0607070:CDS 55.0%
GGATGCTCAACCTTTGGTGG+TGG - chr4_2:53752243-53752262 None:intergenic 55.0%
!! CAAACCTCCACCGGTTCCAA+AGG + chr4_2:53752287-53752306 Msa0607070:CDS 55.0%
!! GGTGGAAGTGCCTTTGGAAC+CGG - chr4_2:53752300-53752319 None:intergenic 55.0%
!! ACTGGTGGTGGAAGTGCCTT+TGG - chr4_2:53752306-53752325 None:intergenic 55.0%
! TTCTTGATCGGGACTGGTGG+TGG - chr4_2:53752318-53752337 None:intergenic 55.0%
GGTTTCTTGATCGGGACTGG+TGG - chr4_2:53752321-53752340 None:intergenic 55.0%
GTTGGAAGAGGTGGACATGG+TGG - chr4_2:53752471-53752490 None:intergenic 55.0%
!! GGGTGGTGGAAGAAGCTCTT+TGG - chr4_2:53752594-53752613 None:intergenic 55.0%
GCACCTTGTCCTGCTCATGA+TGG + chr4_2:53751559-53751578 Msa0607070:CDS 55.0%
AGGCCATCATGAGCAGGACA+AGG - chr4_2:53751565-53751584 None:intergenic 55.0%
! ACCCTAAGTACTGCTGCTGC+TGG + chr4_2:53751631-53751650 Msa0607070:CDS 55.0%
ACAGGTGTAGGAGGAGGGAT+AGG - chr4_2:53751937-53751956 None:intergenic 55.0%
ACAGGTGTAGGTGGAGGAAG+AGG - chr4_2:53751970-53751989 None:intergenic 55.0%
ACTGGAACAGGAGGAGGAAG+AGG - chr4_2:53752102-53752121 None:intergenic 55.0%
!! GGTGGTTGTGGCTTTGGAAC+CGG - chr4_2:53752195-53752214 None:intergenic 55.0%
TCCAAAGCCACAACCACCAC+CGG + chr4_2:53752197-53752216 Msa0607070:CDS 55.0%
GGATGCTCAACCTTTGGTGG+TGG - chr4_2:53752243-53752262 None:intergenic 55.0%
!! CAAACCTCCACCGGTTCCAA+AGG + chr4_2:53752287-53752306 Msa0607070:CDS 55.0%
!! GGTGGAAGTGCCTTTGGAAC+CGG - chr4_2:53752300-53752319 None:intergenic 55.0%
!! ACTGGTGGTGGAAGTGCCTT+TGG - chr4_2:53752306-53752325 None:intergenic 55.0%
! TTCTTGATCGGGACTGGTGG+TGG - chr4_2:53752318-53752337 None:intergenic 55.0%
GGTTTCTTGATCGGGACTGG+TGG - chr4_2:53752321-53752340 None:intergenic 55.0%
GTTGGAAGAGGTGGACATGG+TGG - chr4_2:53752471-53752490 None:intergenic 55.0%
!! GGGTGGTGGAAGAAGCTCTT+TGG - chr4_2:53752594-53752613 None:intergenic 55.0%
ATAGGCACAGGTGGAGGGCA+AGG - chr4_2:53751904-53751923 None:intergenic 60.0%
TGGTAAACAGGCACAGGCGG+AGG - chr4_2:53752009-53752028 None:intergenic 60.0%
ACAGGTGTAGGTGGAGGGAG+AGG - chr4_2:53752036-53752055 None:intergenic 60.0%
ACAGGCGTAGGTGGAGGAAG+AGG - chr4_2:53752069-53752088 None:intergenic 60.0%
!! ACTGGAGCAGGTGGTGGAAC+TGG - chr4_2:53752159-53752178 None:intergenic 60.0%
!! TGTGGCTTTGGAACCGGAGG+AGG - chr4_2:53752189-53752208 None:intergenic 60.0%
!! GGTTGTGGCTTTGGAACCGG+AGG - chr4_2:53752192-53752211 None:intergenic 60.0%
! ACCGGTGGTGGTTGTGGCTT+TGG - chr4_2:53752201-53752220 None:intergenic 60.0%
TTCTTGACCGGAACCGGTGG+TGG - chr4_2:53752213-53752232 None:intergenic 60.0%
GGTTTCTTGACCGGAACCGG+TGG - chr4_2:53752216-53752235 None:intergenic 60.0%
!! AGTGCCTTTGGAACCGGTGG+AGG - chr4_2:53752294-53752313 None:intergenic 60.0%
!! GGAAGTGCCTTTGGAACCGG+TGG - chr4_2:53752297-53752316 None:intergenic 60.0%
GGAGGCAGAGTTGGAAGAGG+TGG - chr4_2:53752480-53752499 None:intergenic 60.0%
ATAGGCACAGGTGGAGGGCA+AGG - chr4_2:53751904-53751923 None:intergenic 60.0%
TGGTAAACAGGCACAGGCGG+AGG - chr4_2:53752009-53752028 None:intergenic 60.0%
ACAGGTGTAGGTGGAGGGAG+AGG - chr4_2:53752036-53752055 None:intergenic 60.0%
ACAGGCGTAGGTGGAGGAAG+AGG - chr4_2:53752069-53752088 None:intergenic 60.0%
!! ACTGGAGCAGGTGGTGGAAC+TGG - chr4_2:53752159-53752178 None:intergenic 60.0%
!! TGTGGCTTTGGAACCGGAGG+AGG - chr4_2:53752189-53752208 None:intergenic 60.0%
!! GGTTGTGGCTTTGGAACCGG+AGG - chr4_2:53752192-53752211 None:intergenic 60.0%
! ACCGGTGGTGGTTGTGGCTT+TGG - chr4_2:53752201-53752220 None:intergenic 60.0%
TTCTTGACCGGAACCGGTGG+TGG - chr4_2:53752213-53752232 None:intergenic 60.0%
GGTTTCTTGACCGGAACCGG+TGG - chr4_2:53752216-53752235 None:intergenic 60.0%
!! AGTGCCTTTGGAACCGGTGG+AGG - chr4_2:53752294-53752313 None:intergenic 60.0%
!! GGAAGTGCCTTTGGAACCGG+TGG - chr4_2:53752297-53752316 None:intergenic 60.0%
GGAGGCAGAGTTGGAAGAGG+TGG - chr4_2:53752480-53752499 None:intergenic 60.0%
ACAGGCACAGGCGGAGGAAG+AGG - chr4_2:53752003-53752022 None:intergenic 65.0%
!! GCCACAACCACCACCGGTTC+CGG + chr4_2:53752203-53752222 Msa0607070:CDS 65.0%
! ACCGGAACCGGTGGTGGTTG+TGG - chr4_2:53752207-53752226 None:intergenic 65.0%
ACAGGCACAGGCGGAGGAAG+AGG - chr4_2:53752003-53752022 None:intergenic 65.0%
!! GCCACAACCACCACCGGTTC+CGG + chr4_2:53752203-53752222 Msa0607070:CDS 65.0%
! ACCGGAACCGGTGGTGGTTG+TGG - chr4_2:53752207-53752226 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 53750456 53752755 53750456 ID=Msa0607070;Name=Msa0607070
chr4_2 mRNA 53750456 53752755 53750456 ID=Msa0607070-mRNA-1;Parent=Msa0607070;Name=Msa0607070-mRNA-1;_AED=0.03;_eAED=0.03;_QI=272|1|0.5|1|1|0.5|2|0|512
chr4_2 exon 53750456 53750899 53750456 ID=Msa0607070-mRNA-1:exon:13297;Parent=Msa0607070-mRNA-1
chr4_2 exon 53751392 53752755 53751392 ID=Msa0607070-mRNA-1:exon:13298;Parent=Msa0607070-mRNA-1
chr4_2 five_prime_UTR 53750456 53750727 53750456 ID=Msa0607070-mRNA-1:five_prime_utr;Parent=Msa0607070-mRNA-1
chr4_2 CDS 53750728 53750899 53750728 ID=Msa0607070-mRNA-1:cds;Parent=Msa0607070-mRNA-1
chr4_2 CDS 53751392 53752755 53751392 ID=Msa0607070-mRNA-1:cds;Parent=Msa0607070-mRNA-1
Gene Sequence

>Msa0607070

ATGCAGATTTTCACTCTGCGCCAAAGAGCACTTTTGTGCTCTTGGCTGTTTGTTGTCTTTTTGGTACTAGGTTTTTGCTATGGTGGAGACCATAGTACAGTTGAGGTAGTTGGGCTTGGAGAATGCGCAGATTGCATTCAGAACAATATTAAGACTAGCCAGGCTTTCTCAGGGCTACATGTAACAATTGACTGCAAAGAAGCAAATGGACATTTTAAAACAAGAGGGGCAGGTGAGCTTGATAAAAAAGGAAATTTCAAAGTATCCCTTCCTCAAGAAATTGTAAAAGAAGGTGAACTGAAAGAAGAATGTTATGCTCAGCTACATAGTGCAACAGCTGCACCTTGTCCTGCTCATGATGGCCTGCAAAACACCAAAATTGTCATCAAGTCAAAATCTGATGACAAACACACCCTAAGTACTGCTGCTGCTGGTAAACTCAAATTTTCATCAGCAACATGTACCTCCAAATTCTTTTGGCCTCTCTTCAAACATCCTCTTTTTCCTAAGCATCCTCATCCTGATTTACCTCAATTCCCCCCTAAAGTTTTTCCACCATTTCCACCAAAGATTTTCCATAAACACCCTCTTTTTCCTCCTGTTCCTATCTACAAGAAACCTCCATTTCCTCATATTCCTATCTACAAACCTCCCTTTCCTCATATTCCCATCTACAAGAAACCTTGCCCTCCACCTGTGCCTATATATGAAAAACCTATCCCTCCTCCTACACCTGTTTATGAGAAACCTCTTCCTCCACCTACACCTGTCTATGAGAAACCTCTTCCTCCGCCTGTGCCTGTTTACCATAAACCTCTCCCTCCACCTACACCTGTGTATGAGAAACCTCTTCCTCCACCTACGCCTGTATATCATAAACCTCTTCCTCCTCCTGTTCCAGTCAAGAAACCATGTCCACCACCAAAGGTTGAACATCCAGTTCCACCACCTGCTCCAGTATACAAACCTCCTCCGGTTCCAAAGCCACAACCACCACCGGTTCCGGTCAAGAAACCATGTCCACCACCAAAGGTTGAGCATCCAGTTTTACCACCCGTTCCAGTATACAAACCTCCACCGGTTCCAAAGGCACTTCCACCACCAGTCCCGATCAAGAAACCATGTCCACCAAAGATTGAGCACCCAGTTCTACCACCTGTTCCAATATATAAGCCTCCAGTAGTAATTCCAAAGCCACCGGTTGTTCCAATTTACAAACCACCAGTTGTTCTTCCTCCATTCAAGAAACCACCATGTCCACCTCTTCCAACTCTGCCTCCAAAGAGCTTTTTCCATCACCCCAAGTTTGGAAAATTGCCTCCAAAGAGCTTTTTTCATCACCCTAAGTATGGAAAATGGCCTCCATTGCCTCCAAAGAGCTTCTTCCACCACCCCAAGTATTTTGGAAAATGGCCACCAATCCCTCATAAGAGCTTCTTCCATCACCCAAAGTTTGGAAAGTGGCCACCAATTAATCCAAAAAGCCTCTTCCATCACCCCAAGTTTGGATCATGGCCTCCACTAAGTCCTCATAAT
Protein sequence

>Msa0607070

MQIFTLRQRALLCSWLFVVFLVLGFCYGGDHSTVEVVGLGECADCIQNNIKTSQAFSGLHVTIDCKEANGHFKTRGAGELDKKGNFKVSLPQEIVKEGELKEECYAQLHSATAAPCPAHDGLQNTKIVIKSKSDDKHTLSTAAAGKLKFSSATCTSKFFWPLFKHPLFPKHPHPDLPQFPPKVFPPFPPKIFHKHPLFPPVPIYKKPPFPHIPIYKPPFPHIPIYKKPCPPPVPIYEKPIPPPTPVYEKPLPPPTPVYEKPLPPPVPVYHKPLPPPTPVYEKPLPPPTPVYHKPLPPPVPVKKPCPPPKVEHPVPPPAPVYKPPPVPKPQPPPVPVKKPCPPPKVEHPVLPPVPVYKPPPVPKALPPPVPIKKPCPPKIEHPVLPPVPIYKPPVVIPKPPVVPIYKPPVVLPPFKKPPCPPLPTLPPKSFFHHPKFGKLPPKSFFHHPKYGKWPPLPPKSFFHHPKYFGKWPPIPHKSFFHHPKFGKWPPINPKSLFHHPKFGSWPPLSPHN