AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0687650


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0687650 MtrunA17_Chr4g0038461 97.674 301 7 0 1 301 1 301 0.0 564
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0687650 AT2G21140.1 42.345 307 131 14 1 284 1 284 1.89e-42 154
Msa0687650 AT2G21140.1 49.091 165 50 9 301 457 180 318 1.35e-11 66.2
Msa0687650 AT4G38770.1 58.015 131 46 3 33 162 31 153 3.13e-39 148

Find 181 sgRNAs with CRISPR-Local

Find 496 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCACCACCCCAAGTATTT+TGG 0.149326 4_4:+52569188 Msa0687650:CDS
ACAACTGGTGGTTTGTAAAT+TGG 0.182003 4_4:-52569011 None:intergenic
GAGAAGCTACTAAGCTTCTT+TGG 0.262352 4_4:-52567250 None:intergenic
ACTACTGGAGGCTTATATAT+TGG 0.279939 4_4:-52568966 None:intergenic
AGTATTGATTGATCTGCTTT+AGG 0.293210 4_4:+52567283 Msa0687650:five_prime_UTR
GAAGAGAGGCCAAAAGAATT+TGG 0.300313 4_4:-52568271 None:intergenic
ACCGGTGGTGGTTGTGGCTT+TGG 0.311135 4_4:-52568783 None:intergenic
CTCTTCCATCACCCCAAGTT+TGG 0.325374 4_4:+52569290 Msa0687650:CDS
TTCTTCCATCACCCAAAGTT+TGG 0.326013 4_4:+52569239 Msa0687650:CDS
CATGTACCTCCAAATTCTTT+TGG 0.326491 4_4:+52568262 Msa0687650:CDS
ATTGGAACAACCGGTGGCTT+TGG 0.327984 4_4:-52568993 None:intergenic
GGGTGGTGGAAGAAGCTCTT+TGG 0.328567 4_4:-52569176 None:intergenic
CTTAAATTTCATTGTCGGTT+TGG 0.341172 4_4:+52567148 Msa0687650:five_prime_UTR
ACTGGAACGGGTGGTAAAAC+TGG 0.341382 4_4:-52568846 None:intergenic
TCCACTAAGTCCTCATAATT+AGG 0.348252 4_4:+52569322 Msa0687650:CDS
GGTGGTTGTGGCTTTGGAAC+CGG 0.357210 4_4:-52568777 None:intergenic
GTGGCCACTTTCCAAACTTT+GGG 0.360377 4_4:-52569250 None:intergenic
GGGTGTTTATGGAAAATCTT+TGG 0.361066 4_4:-52568369 None:intergenic
ATCACCCTAAGTATGGAAAA+TGG 0.363281 4_4:+52569141 Msa0687650:CDS
TGGAAAATCTTTGGTGGAAA+TGG 0.364399 4_4:-52568360 None:intergenic
ATTGGAACAGGTGGTAGAAC+TGG 0.374309 4_4:-52568948 None:intergenic
GGAAAGGGAGGTTTGTAGAT+AGG 0.379613 4_4:-52568441 None:intergenic
AGGGCAAGGTTTCTTGTAGA+TGG 0.383488 4_4:-52568472 None:intergenic
GGTGGCCACTTTCCAAACTT+TGG 0.388021 4_4:-52569251 None:intergenic
CATGGTTTCTTGACCGGAAC+CGG 0.393305 4_4:-52568801 None:intergenic
ATTTCATTGTCGGTTTGGTT+TGG 0.393582 4_4:+52567153 Msa0687650:five_prime_UTR
ACTGGTGGTGGAAGTGCCTT+TGG 0.394673 4_4:-52568888 None:intergenic
CATGGTTTCTTGACTGGAAC+AGG 0.398406 4_4:-52568696 None:intergenic
AAGAGCACAAAAGTGCTCTT+TGG 0.399281 4_4:-52567333 None:intergenic
ACCGGAGGAGGTTTGTATAC+TGG 0.407753 4_4:-52568759 None:intergenic
AGAACTGGGTGCTCAATCTT+TGG 0.407928 4_4:-52568933 None:intergenic
GTGGACATGGTTTCTTGATC+GGG 0.409936 4_4:-52568911 None:intergenic
ACCGGTGGAGGTTTGTATAC+TGG 0.412309 4_4:-52568864 None:intergenic
TACCAGCAGCAGCAGTACTT+AGG 0.413145 4_4:-52568218 None:intergenic
ACTGGAGCAGGTGGTGGAAC+TGG 0.413223 4_4:-52568741 None:intergenic
TGCTCAATCTTTGGTGGACA+TGG 0.421709 4_4:-52568924 None:intergenic
GCCACAACCACCACCGGTTC+CGG 0.423338 4_4:+52568788 Msa0687650:CDS
TAGATAGGAATATGAGGAAA+TGG 0.423815 4_4:-52568426 None:intergenic
TTCTTGATCGGGACTGGTGG+TGG 0.425402 4_4:-52568900 None:intergenic
CAACTACCTCAACTGTACTA+TGG 0.428844 4_4:-52567402 None:intergenic
GGTGGACATGGTTTCTTGAT+CGG 0.429905 4_4:-52568912 None:intergenic
ACAGGTGTAGGTGGAGGAAG+AGG 0.429970 4_4:-52568552 None:intergenic
GGGAGAGGTTTATGGTAAAC+AGG 0.430983 4_4:-52568603 None:intergenic
GGAACTGGATGTTCAACCTT+TGG 0.432776 4_4:-52568726 None:intergenic
AATGGAGGTTTCTTGTAGAT+AGG 0.434086 4_4:-52568408 None:intergenic
GGAAGAGGTTTCTCATAAAC+AGG 0.436457 4_4:-52568537 None:intergenic
GGTGGAAGTGCCTTTGGAAC+CGG 0.437983 4_4:-52568882 None:intergenic
AGGTTCTTAAATTTCATTGT+CGG 0.439658 4_4:+52567143 Msa0687650:five_prime_UTR
ACAGTTGAGGTAGTTGGGCT+TGG 0.440510 4_4:+52567409 Msa0687650:CDS
TTGAATGGAGGAAGAACAAC+TGG 0.443546 4_4:-52569026 None:intergenic
GGACATGGTGGTTTCTTGAA+TGG 0.444236 4_4:-52569041 None:intergenic
ACCGGAACCGGTGGTGGTTG+TGG 0.444913 4_4:-52568789 None:intergenic
GGTGGACATGGTTTCTTGAC+TGG 0.446271 4_4:-52568702 None:intergenic
TCATATATAGGCACAGGTGG+AGG 0.447385 4_4:-52568492 None:intergenic
TAGGTGGAGGGAGAGGTTTA+TGG 0.447625 4_4:-52568611 None:intergenic
CATGGTTTCTTGATCGGGAC+TGG 0.450738 4_4:-52568906 None:intergenic
GGTTTCTTGTAGATAGGAAC+AGG 0.451221 4_4:-52568402 None:intergenic
TGATGGAAGAAGCTCTTATG+AGG 0.451803 4_4:-52569227 None:intergenic
AAGACTAGCCAGGCTTTCTC+AGG 0.452806 4_4:+52567463 Msa0687650:CDS
ATAGTACAGTTGAGGTAGTT+GGG 0.453640 4_4:+52567404 Msa0687650:CDS
GGAAGAGGTTTATGATATAC+AGG 0.458760 4_4:-52568669 None:intergenic
AAATCAGGATGAGGATGCTT+AGG 0.459714 4_4:-52568309 None:intergenic
TTCTTGTAGATGGGAATATG+AGG 0.460426 4_4:-52568462 None:intergenic
AAGCTCTTTGGAGGCAGAGT+TGG 0.461018 4_4:-52569071 None:intergenic
ACAGGCACAGGCGGAGGAAG+AGG 0.461209 4_4:-52568585 None:intergenic
CATAGTACAGTTGAGGTAGT+TGG 0.461236 4_4:+52567403 Msa0687650:CDS
AGTGCCTTTGGAACCGGTGG+AGG 0.465214 4_4:-52568876 None:intergenic
GGTGGCTTTGGAATTACTAC+TGG 0.468914 4_4:-52568981 None:intergenic
TTCTTGACTGGAACAGGAGG+AGG 0.469362 4_4:-52568690 None:intergenic
ACCTAATTATGAGGACTTAG+TGG 0.469386 4_4:-52569323 None:intergenic
ATCACCCCAAGTTTGGATCA+TGG 0.469401 4_4:+52569297 Msa0687650:CDS
ATGATCCAAACTTGGGGTGA+TGG 0.472534 4_4:-52569295 None:intergenic
ACAGGTGTAGGAGGAGGGAT+AGG 0.473148 4_4:-52568519 None:intergenic
TGTGGCTTTGGAACCGGAGG+AGG 0.476133 4_4:-52568771 None:intergenic
ACTGGAACAGGAGGAGGAAG+AGG 0.480945 4_4:-52568684 None:intergenic
GGAGGCTTATATATTGGAAC+AGG 0.482206 4_4:-52568960 None:intergenic
ACCAGCAGCAGCAGTACTTA+GGG 0.485236 4_4:-52568217 None:intergenic
TTCCAAAATACTTGGGGTGG+TGG 0.485411 4_4:-52569190 None:intergenic
TGGAGGCCATGATCCAAACT+TGG 0.487208 4_4:-52569303 None:intergenic
TAGATGGGAATATGAGGAAA+GGG 0.489468 4_4:-52568456 None:intergenic
GCACCTTGTCCTGCTCATGA+TGG 0.491575 4_4:+52568144 Msa0687650:CDS
AAAACTGGATGCTCAACCTT+TGG 0.492655 4_4:-52568831 None:intergenic
GGAGGTTTGTATACTGGAAC+GGG 0.495970 4_4:-52568858 None:intergenic
TCAACCTTTGGTGGTGGACA+TGG 0.497538 4_4:-52568819 None:intergenic
AAAAGAGCCACCTAATTATG+AGG 0.498709 4_4:-52569332 None:intergenic
TCAACCTTTGGTGGTGGACA+TGG 0.500021 4_4:-52568714 None:intergenic
GGTGGACATGGTTTCTTGAC+CGG 0.505845 4_4:-52568807 None:intergenic
CCTCAAGAAATTGTAAAAGA+AGG 0.509177 4_4:+52568075 Msa0687650:CDS
AAGAAGCTCTTATGAGGGAT+TGG 0.509685 4_4:-52569221 None:intergenic
GGTTTGTAGATAGGAATATG+AGG 0.511489 4_4:-52568432 None:intergenic
ATTGACTGCAAAGAAGCAAA+TGG 0.512954 4_4:+52567991 Msa0687650:CDS
ACAAAGTACCTGAGAAAGCC+TGG 0.513034 4_4:-52567471 None:intergenic
TTCTTGACCGGAACCGGTGG+TGG 0.513178 4_4:-52568795 None:intergenic
GTCTAATATATAAACAATGT+TGG 0.513532 4_4:-52567185 None:intergenic
GGAAGAGGTTTCTCATACAC+AGG 0.514773 4_4:-52568636 None:intergenic
GAACAATATTAAGACTAGCC+AGG 0.519758 4_4:+52567453 Msa0687650:CDS
CAAACTTGGGGTGATGGAAG+AGG 0.519949 4_4:-52569289 None:intergenic
TGGTGGAAGAAGCTCTTTGG+AGG 0.520821 4_4:-52569173 None:intergenic
GGAGGTTTGTATACTGGAGC+AGG 0.522258 4_4:-52568753 None:intergenic
AAGAAGCTCTTTGGAGGCAA+TGG 0.524273 4_4:-52569167 None:intergenic
TCCAGTATACAAACCTCCTC+CGG 0.524551 4_4:+52568758 Msa0687650:CDS
GGGCAAGGTTTCTTGTAGAT+GGG 0.525451 4_4:-52568471 None:intergenic
ACTTTCCAAACTTTGGGTGA+TGG 0.525688 4_4:-52569244 None:intergenic
GGAAGAGGTTTCTCATAGAC+AGG 0.529446 4_4:-52568570 None:intergenic
TCATAAACAGGTGTAGGAGG+AGG 0.529472 4_4:-52568525 None:intergenic
TGTTTATGGAAAATCTTTGG+TGG 0.529934 4_4:-52568366 None:intergenic
TTGTATACTGGAGCAGGTGG+TGG 0.530491 4_4:-52568747 None:intergenic
ATCACCCAAAGTTTGGAAAG+TGG 0.535768 4_4:+52569246 Msa0687650:CDS
AAGAACCTCACATGGTTCAA+AGG 0.536553 4_4:-52567128 None:intergenic
GGCTTTGGAATTACTACTGG+AGG 0.536776 4_4:-52568978 None:intergenic
TGGAGGTTTGTATACTGGAA+CGG 0.538317 4_4:-52568859 None:intergenic
GGTTTGTAAATTGGAACAAC+CGG 0.540910 4_4:-52569002 None:intergenic
AAAGCAGATCAATCAATACT+TGG 0.540981 4_4:-52567280 None:intergenic
ACTGGATGTTCAACCTTTGG+TGG 0.542345 4_4:-52568723 None:intergenic
TTCTCATAAACAGGTGTAGG+AGG 0.543447 4_4:-52568528 None:intergenic
ACTGGGTGCTCAATCTTTGG+TGG 0.543549 4_4:-52568930 None:intergenic
TCCAAAGCCACAACCACCAC+CGG 0.544433 4_4:+52568782 Msa0687650:CDS
ACAGGCGTAGGTGGAGGAAG+AGG 0.545913 4_4:-52568651 None:intergenic
GGCTTATATATTGGAACAGG+TGG 0.547652 4_4:-52568957 None:intergenic
GGTTTCTCATAAACAGGTGT+AGG 0.548606 4_4:-52568531 None:intergenic
ATAGGCACAGGTGGAGGGCA+AGG 0.548824 4_4:-52568486 None:intergenic
GGAGGCCATGATCCAAACTT+GGG 0.549567 4_4:-52569302 None:intergenic
AAAATCTTTGGTGGAAATGG+TGG 0.550630 4_4:-52568357 None:intergenic
ACAGGTGTAGGTGGAGGGAG+AGG 0.551926 4_4:-52568618 None:intergenic
TGATATACAGGCGTAGGTGG+AGG 0.552048 4_4:-52568657 None:intergenic
GTAGATGGGAATATGAGGAA+AGG 0.552981 4_4:-52568457 None:intergenic
TCATACACAGGTGTAGGTGG+AGG 0.556428 4_4:-52568624 None:intergenic
TGGTAAACAGGCACAGGCGG+AGG 0.557803 4_4:-52568591 None:intergenic
AAGCTCTTATGAGGGATTGG+TGG 0.558802 4_4:-52569218 None:intergenic
ATGGGAATATGAGGAAAGGG+AGG 0.558873 4_4:-52568453 None:intergenic
GGTTTATGGTAAACAGGCAC+AGG 0.560487 4_4:-52568597 None:intergenic
CATATATAGGCACAGGTGGA+GGG 0.562809 4_4:-52568491 None:intergenic
ACCCTAAGTACTGCTGCTGC+TGG 0.563864 4_4:+52568216 Msa0687650:CDS
GGTTTATGATATACAGGCGT+AGG 0.567260 4_4:-52568663 None:intergenic
GGAGGCAGAGTTGGAAGAGG+TGG 0.568083 4_4:-52569062 None:intergenic
GGATGCTCAACCTTTGGTGG+TGG 0.571275 4_4:-52568825 None:intergenic
TTCTCATAGACAGGTGTAGG+TGG 0.573276 4_4:-52568561 None:intergenic
AAGCTCTTTGGAGGCAATGG+AGG 0.573741 4_4:-52569164 None:intergenic
TTCTCATACACAGGTGTAGG+TGG 0.574160 4_4:-52568627 None:intergenic
ACTGGATGCTCAACCTTTGG+TGG 0.575483 4_4:-52568828 None:intergenic
GGTTTCTCATAGACAGGTGT+AGG 0.575587 4_4:-52568564 None:intergenic
TCATAGACAGGTGTAGGTGG+AGG 0.577698 4_4:-52568558 None:intergenic
AATTGAGGTAAATCAGGATG+AGG 0.587264 4_4:-52568318 None:intergenic
TTTGGAGGCAGAGTTGGAAG+AGG 0.589114 4_4:-52569065 None:intergenic
GGAAGTGCCTTTGGAACCGG+TGG 0.589459 4_4:-52568879 None:intergenic
TTATGATATACAGGCGTAGG+TGG 0.589531 4_4:-52568660 None:intergenic
TCCAGTATACAAACCTCCAC+CGG 0.590695 4_4:+52568863 Msa0687650:CDS
GGTTTCTCATACACAGGTGT+AGG 0.592215 4_4:-52568630 None:intergenic
GGATGTTCAACCTTTGGTGG+TGG 0.593017 4_4:-52568720 None:intergenic
CATAAACAGGTGTAGGAGGA+GGG 0.593725 4_4:-52568524 None:intergenic
CAAACCTCCACCGGTTCCAA+AGG 0.595650 4_4:+52568872 Msa0687650:CDS
GAAACCATGTCCACCACCAA+AGG 0.604111 4_4:+52568710 Msa0687650:CDS
GAAACCATGTCCACCACCAA+AGG 0.604111 4_4:+52568815 Msa0687650:CDS
GAGAGGCCAAAAGAATTTGG+AGG 0.605203 4_4:-52568268 None:intergenic
GGTTTCTTGATCGGGACTGG+TGG 0.605416 4_4:-52568903 None:intergenic
TTGGAACAGGTGGTAGAACT+GGG 0.608093 4_4:-52568947 None:intergenic
AGAGTTGGAAGAGGTGGACA+TGG 0.609427 4_4:-52569056 None:intergenic
GGTTTCTTGACCGGAACCGG+TGG 0.610970 4_4:-52568798 None:intergenic
AGTAGTAATTCCAAAGCCAC+CGG 0.613019 4_4:+52568983 Msa0687650:CDS
AAAAGAGGATGTTTGAAGAG+AGG 0.615228 4_4:-52568285 None:intergenic
ATAGGAATATGAGGAAATGG+AGG 0.616115 4_4:-52568423 None:intergenic
GTCCACCTTTGAACCATGTG+AGG 0.621477 4_4:+52567123 Msa0687650:five_prime_UTR
CATACACAGGTGTAGGTGGA+GGG 0.625803 4_4:-52568623 None:intergenic
TTCTTGTAGATAGGAACAGG+AGG 0.631040 4_4:-52568399 None:intergenic
AGGCCATCATGAGCAGGACA+AGG 0.637081 4_4:-52568147 None:intergenic
TTGTAAATTGGAACAACCGG+TGG 0.639441 4_4:-52568999 None:intergenic
GTTGGAAGAGGTGGACATGG+TGG 0.641805 4_4:-52569053 None:intergenic
GGTTGTGGCTTTGGAACCGG+AGG 0.643174 4_4:-52568774 None:intergenic
AACCTCACATGGTTCAAAGG+TGG 0.643285 4_4:-52567125 None:intergenic
GGTTTGTATACTGGAGCAGG+TGG 0.652100 4_4:-52568750 None:intergenic
TTATGGTAAACAGGCACAGG+CGG 0.653317 4_4:-52568594 None:intergenic
TGGAGACCATAGTACAGTTG+AGG 0.656125 4_4:+52567396 Msa0687650:CDS
GGTTTCTTGACTGGAACAGG+AGG 0.656712 4_4:-52568693 None:intergenic
CATGGTGGTTTCTTGAATGG+AGG 0.661048 4_4:-52569038 None:intergenic
GATGGAAGAAGCTCTTATGA+GGG 0.661558 4_4:-52569226 None:intergenic
AATGGAGGAAGAACAACTGG+TGG 0.671156 4_4:-52569023 None:intergenic
GAGGCCATGATCCAAACTTG+GGG 0.674792 4_4:-52569301 None:intergenic
TGAAATTTAAGAACCTCACA+TGG 0.680500 4_4:-52567136 None:intergenic
TAATTATGAGGACTTAGTGG+AGG 0.686242 4_4:-52569320 None:intergenic
GAGTATACTACTAATTTGAG+AGG 0.686667 4_4:-52567207 None:intergenic
GGTTTGTATACTGGAACGGG+TGG 0.692269 4_4:-52568855 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATCAAAAAAAATGTTT+TGG + chr4_4:52567530-52567549 Msa0687650:intron 10.0%
!!! TTTTATCAAAAAAAATGTTT+TGG + chr4_4:52567530-52567549 Msa0687650:intron 10.0%
!! GTCTAATATATAAACAATGT+TGG - chr4_4:52567188-52567207 None:intergenic 20.0%
!! ATCAAGTATCTCTAAATATT+AGG + chr4_4:52567662-52567681 Msa0687650:intron 20.0%
!!! TTGTTTATATTTTGTTAGAG+AGG - chr4_4:52567831-52567850 None:intergenic 20.0%
!! TCTCTTTGTAACAAAATATA+AGG - chr4_4:52567905-52567924 None:intergenic 20.0%
!! GTCTAATATATAAACAATGT+TGG - chr4_4:52567188-52567207 None:intergenic 20.0%
!! ATCAAGTATCTCTAAATATT+AGG + chr4_4:52567662-52567681 Msa0687650:intron 20.0%
!!! TTGTTTATATTTTGTTAGAG+AGG - chr4_4:52567831-52567850 None:intergenic 20.0%
!! TCTCTTTGTAACAAAATATA+AGG - chr4_4:52567905-52567924 None:intergenic 20.0%
!! GATTTTGTTAATAGTATAGC+TGG + chr4_4:52567074-52567093 Msa0687650:five_prime_UTR 25.0%
! AGGTTCTTAAATTTCATTGT+CGG + chr4_4:52567143-52567162 Msa0687650:five_prime_UTR 25.0%
! TTTCTTTGGTTAAAAAGAAG+AGG - chr4_4:52567578-52567597 None:intergenic 25.0%
! CTTGATAAAAGTGATATAGT+AGG - chr4_4:52567648-52567667 None:intergenic 25.0%
! AACTATGAGTATCAAATTCA+TGG - chr4_4:52567782-52567801 None:intergenic 25.0%
!!! TTGTGCATAATTTTTTTGCA+GGG + chr4_4:52567956-52567975 Msa0687650:intron 25.0%
!!! AATGGACATTTTAAAACAAG+AGG + chr4_4:52568009-52568028 Msa0687650:CDS 25.0%
!!! ATGGACATTTTAAAACAAGA+GGG + chr4_4:52568010-52568029 Msa0687650:CDS 25.0%
!! TTTTACAATTTCTTGAGGAA+GGG - chr4_4:52568073-52568092 None:intergenic 25.0%
!!! TTTTGACTTGATGACAATTT+TGG - chr4_4:52568181-52568200 None:intergenic 25.0%
!! GATTTTGTTAATAGTATAGC+TGG + chr4_4:52567074-52567093 Msa0687650:five_prime_UTR 25.0%
! AGGTTCTTAAATTTCATTGT+CGG + chr4_4:52567143-52567162 Msa0687650:five_prime_UTR 25.0%
! TTTCTTTGGTTAAAAAGAAG+AGG - chr4_4:52567578-52567597 None:intergenic 25.0%
! CTTGATAAAAGTGATATAGT+AGG - chr4_4:52567648-52567667 None:intergenic 25.0%
! AACTATGAGTATCAAATTCA+TGG - chr4_4:52567782-52567801 None:intergenic 25.0%
!!! TTGTGCATAATTTTTTTGCA+GGG + chr4_4:52567956-52567975 Msa0687650:intron 25.0%
!!! AATGGACATTTTAAAACAAG+AGG + chr4_4:52568009-52568028 Msa0687650:CDS 25.0%
!!! ATGGACATTTTAAAACAAGA+GGG + chr4_4:52568010-52568029 Msa0687650:CDS 25.0%
!! TTTTACAATTTCTTGAGGAA+GGG - chr4_4:52568073-52568092 None:intergenic 25.0%
!!! TTTTGACTTGATGACAATTT+TGG - chr4_4:52568181-52568200 None:intergenic 25.0%
TGAAATTTAAGAACCTCACA+TGG - chr4_4:52567139-52567158 None:intergenic 30.0%
! CTTAAATTTCATTGTCGGTT+TGG + chr4_4:52567148-52567167 Msa0687650:five_prime_UTR 30.0%
GAGTATACTACTAATTTGAG+AGG - chr4_4:52567210-52567229 None:intergenic 30.0%
AAAGCAGATCAATCAATACT+TGG - chr4_4:52567283-52567302 None:intergenic 30.0%
!! AGTATTGATTGATCTGCTTT+AGG + chr4_4:52567283-52567302 Msa0687650:five_prime_UTR 30.0%
!! TTTGTTGTCTTTTTGGTACT+AGG + chr4_4:52567361-52567380 Msa0687650:CDS 30.0%
GACTTATGGAAGAATTTCTT+TGG - chr4_4:52567592-52567611 None:intergenic 30.0%
TATTAGGTGAAGACATAAAG+TGG + chr4_4:52567678-52567697 Msa0687650:intron 30.0%
!! AGTAACTTGTTTGAAAAGTG+TGG + chr4_4:52567720-52567739 Msa0687650:intron 30.0%
GGATCTAGTTATTATAGCAT+AGG - chr4_4:52567761-52567780 None:intergenic 30.0%
! ACAAAAGAAGTACATGTATG+TGG + chr4_4:52567847-52567866 Msa0687650:intron 30.0%
!!! CTTGTGCATAATTTTTTTGC+AGG + chr4_4:52567955-52567974 Msa0687650:intron 30.0%
!!! TGGACATTTTAAAACAAGAG+GGG + chr4_4:52568011-52568030 Msa0687650:CDS 30.0%
! CTTTTACAATTTCTTGAGGA+AGG - chr4_4:52568074-52568093 None:intergenic 30.0%
! CCTTCTTTTACAATTTCTTG+AGG - chr4_4:52568078-52568097 None:intergenic 30.0%
CCTCAAGAAATTGTAAAAGA+AGG + chr4_4:52568075-52568094 Msa0687650:CDS 30.0%
! AAATGGTGGAAAAACTTTAG+GGG - chr4_4:52568346-52568365 None:intergenic 30.0%
! GAAATGGTGGAAAAACTTTA+GGG - chr4_4:52568347-52568366 None:intergenic 30.0%
TGTTTATGGAAAATCTTTGG+TGG - chr4_4:52568369-52568388 None:intergenic 30.0%
TAGATAGGAATATGAGGAAA+TGG - chr4_4:52568429-52568448 None:intergenic 30.0%
! GGGATAGGTTTTTCATATAT+AGG - chr4_4:52568507-52568526 None:intergenic 30.0%
! AAGAGGCTTTTTGGATTAAT+TGG - chr4_4:52569275-52569294 None:intergenic 30.0%
TGAAATTTAAGAACCTCACA+TGG - chr4_4:52567139-52567158 None:intergenic 30.0%
! CTTAAATTTCATTGTCGGTT+TGG + chr4_4:52567148-52567167 Msa0687650:five_prime_UTR 30.0%
GAGTATACTACTAATTTGAG+AGG - chr4_4:52567210-52567229 None:intergenic 30.0%
AAAGCAGATCAATCAATACT+TGG - chr4_4:52567283-52567302 None:intergenic 30.0%
!! AGTATTGATTGATCTGCTTT+AGG + chr4_4:52567283-52567302 Msa0687650:five_prime_UTR 30.0%
!! TTTGTTGTCTTTTTGGTACT+AGG + chr4_4:52567361-52567380 Msa0687650:CDS 30.0%
GACTTATGGAAGAATTTCTT+TGG - chr4_4:52567592-52567611 None:intergenic 30.0%
TATTAGGTGAAGACATAAAG+TGG + chr4_4:52567678-52567697 Msa0687650:intron 30.0%
!! AGTAACTTGTTTGAAAAGTG+TGG + chr4_4:52567720-52567739 Msa0687650:intron 30.0%
GGATCTAGTTATTATAGCAT+AGG - chr4_4:52567761-52567780 None:intergenic 30.0%
! ACAAAAGAAGTACATGTATG+TGG + chr4_4:52567847-52567866 Msa0687650:intron 30.0%
!!! CTTGTGCATAATTTTTTTGC+AGG + chr4_4:52567955-52567974 Msa0687650:intron 30.0%
!!! TGGACATTTTAAAACAAGAG+GGG + chr4_4:52568011-52568030 Msa0687650:CDS 30.0%
! CTTTTACAATTTCTTGAGGA+AGG - chr4_4:52568074-52568093 None:intergenic 30.0%
! CCTTCTTTTACAATTTCTTG+AGG - chr4_4:52568078-52568097 None:intergenic 30.0%
CCTCAAGAAATTGTAAAAGA+AGG + chr4_4:52568075-52568094 Msa0687650:CDS 30.0%
! AAATGGTGGAAAAACTTTAG+GGG - chr4_4:52568346-52568365 None:intergenic 30.0%
! GAAATGGTGGAAAAACTTTA+GGG - chr4_4:52568347-52568366 None:intergenic 30.0%
TGTTTATGGAAAATCTTTGG+TGG - chr4_4:52568369-52568388 None:intergenic 30.0%
TAGATAGGAATATGAGGAAA+TGG - chr4_4:52568429-52568448 None:intergenic 30.0%
! GGGATAGGTTTTTCATATAT+AGG - chr4_4:52568507-52568526 None:intergenic 30.0%
! AAGAGGCTTTTTGGATTAAT+TGG - chr4_4:52569275-52569294 None:intergenic 30.0%
!! ATTTCATTGTCGGTTTGGTT+TGG + chr4_4:52567153-52567172 Msa0687650:five_prime_UTR 35.0%
!!! TTGGCTGTTTGTTGTCTTTT+TGG + chr4_4:52567354-52567373 Msa0687650:CDS 35.0%
! TTGGTACTAGGTTTTTGCTA+TGG + chr4_4:52567373-52567392 Msa0687650:CDS 35.0%
ATAGTACAGTTGAGGTAGTT+GGG + chr4_4:52567404-52567423 Msa0687650:CDS 35.0%
! GAACAATATTAAGACTAGCC+AGG + chr4_4:52567453-52567472 Msa0687650:CDS 35.0%
! TCCATAAGTCATTTGAAGTG+TGG + chr4_4:52567602-52567621 Msa0687650:intron 35.0%
TCCACACTTCAAATGACTTA+TGG - chr4_4:52567606-52567625 None:intergenic 35.0%
! TGGACAGATGATAATGCATA+GGG + chr4_4:52567622-52567641 Msa0687650:intron 35.0%
ATTGACTGCAAAGAAGCAAA+TGG + chr4_4:52567991-52568010 Msa0687650:CDS 35.0%
!!! TGACAATTTTGGTGTTTTGC+AGG - chr4_4:52568170-52568189 None:intergenic 35.0%
! CATGTACCTCCAAATTCTTT+TGG + chr4_4:52568262-52568281 Msa0687650:CDS 35.0%
AAAAGAGGATGTTTGAAGAG+AGG - chr4_4:52568288-52568307 None:intergenic 35.0%
AATTGAGGTAAATCAGGATG+AGG - chr4_4:52568321-52568340 None:intergenic 35.0%
! AATGGTGGAAAAACTTTAGG+GGG - chr4_4:52568345-52568364 None:intergenic 35.0%
! GGAAATGGTGGAAAAACTTT+AGG - chr4_4:52568348-52568367 None:intergenic 35.0%
AAAATCTTTGGTGGAAATGG+TGG - chr4_4:52568360-52568379 None:intergenic 35.0%
TGGAAAATCTTTGGTGGAAA+TGG - chr4_4:52568363-52568382 None:intergenic 35.0%
GGGTGTTTATGGAAAATCTT+TGG - chr4_4:52568372-52568391 None:intergenic 35.0%
AATGGAGGTTTCTTGTAGAT+AGG - chr4_4:52568411-52568430 None:intergenic 35.0%
ATAGGAATATGAGGAAATGG+AGG - chr4_4:52568426-52568445 None:intergenic 35.0%
GGTTTGTAGATAGGAATATG+AGG - chr4_4:52568435-52568454 None:intergenic 35.0%
TAGATGGGAATATGAGGAAA+GGG - chr4_4:52568459-52568478 None:intergenic 35.0%
TTCTTGTAGATGGGAATATG+AGG - chr4_4:52568465-52568484 None:intergenic 35.0%
! TTTTCATATATAGGCACAGG+TGG - chr4_4:52568498-52568517 None:intergenic 35.0%
! GGTTTTTCATATATAGGCAC+AGG - chr4_4:52568501-52568520 None:intergenic 35.0%
GGAAGAGGTTTATGATATAC+AGG - chr4_4:52568672-52568691 None:intergenic 35.0%
ACTACTGGAGGCTTATATAT+TGG - chr4_4:52568969-52568988 None:intergenic 35.0%
GGTTTGTAAATTGGAACAAC+CGG - chr4_4:52569005-52569024 None:intergenic 35.0%
! ACAACTGGTGGTTTGTAAAT+TGG - chr4_4:52569014-52569033 None:intergenic 35.0%
! TTTTTCCATCACCCTAAGTA+TGG + chr4_4:52569134-52569153 Msa0687650:CDS 35.0%
! ATTTTCCATACTTAGGGTGA+TGG - chr4_4:52569142-52569161 None:intergenic 35.0%
ATCACCCTAAGTATGGAAAA+TGG + chr4_4:52569141-52569160 Msa0687650:CDS 35.0%
! ATTTTCCAAAATACTTGGGG+TGG - chr4_4:52569196-52569215 None:intergenic 35.0%
!! ACCCCAAGTATTTTGGAAAA+TGG + chr4_4:52569195-52569214 Msa0687650:CDS 35.0%
!! GCCATTTTCCAAAATACTTG+GGG - chr4_4:52569199-52569218 None:intergenic 35.0%
!! GGCCATTTTCCAAAATACTT+GGG - chr4_4:52569200-52569219 None:intergenic 35.0%
!! TGGCCATTTTCCAAAATACT+TGG - chr4_4:52569201-52569220 None:intergenic 35.0%
! AGGCTTTTTGGATTAATTGG+TGG - chr4_4:52569272-52569291 None:intergenic 35.0%
TAATTATGAGGACTTAGTGG+AGG - chr4_4:52569323-52569342 None:intergenic 35.0%
!! ATTTCATTGTCGGTTTGGTT+TGG + chr4_4:52567153-52567172 Msa0687650:five_prime_UTR 35.0%
!!! TTGGCTGTTTGTTGTCTTTT+TGG + chr4_4:52567354-52567373 Msa0687650:CDS 35.0%
! TTGGTACTAGGTTTTTGCTA+TGG + chr4_4:52567373-52567392 Msa0687650:CDS 35.0%
ATAGTACAGTTGAGGTAGTT+GGG + chr4_4:52567404-52567423 Msa0687650:CDS 35.0%
! GAACAATATTAAGACTAGCC+AGG + chr4_4:52567453-52567472 Msa0687650:CDS 35.0%
! TCCATAAGTCATTTGAAGTG+TGG + chr4_4:52567602-52567621 Msa0687650:intron 35.0%
TCCACACTTCAAATGACTTA+TGG - chr4_4:52567606-52567625 None:intergenic 35.0%
! TGGACAGATGATAATGCATA+GGG + chr4_4:52567622-52567641 Msa0687650:intron 35.0%
ATTGACTGCAAAGAAGCAAA+TGG + chr4_4:52567991-52568010 Msa0687650:CDS 35.0%
!!! TGACAATTTTGGTGTTTTGC+AGG - chr4_4:52568170-52568189 None:intergenic 35.0%
! CATGTACCTCCAAATTCTTT+TGG + chr4_4:52568262-52568281 Msa0687650:CDS 35.0%
AAAAGAGGATGTTTGAAGAG+AGG - chr4_4:52568288-52568307 None:intergenic 35.0%
AATTGAGGTAAATCAGGATG+AGG - chr4_4:52568321-52568340 None:intergenic 35.0%
! AATGGTGGAAAAACTTTAGG+GGG - chr4_4:52568345-52568364 None:intergenic 35.0%
! GGAAATGGTGGAAAAACTTT+AGG - chr4_4:52568348-52568367 None:intergenic 35.0%
AAAATCTTTGGTGGAAATGG+TGG - chr4_4:52568360-52568379 None:intergenic 35.0%
TGGAAAATCTTTGGTGGAAA+TGG - chr4_4:52568363-52568382 None:intergenic 35.0%
GGGTGTTTATGGAAAATCTT+TGG - chr4_4:52568372-52568391 None:intergenic 35.0%
AATGGAGGTTTCTTGTAGAT+AGG - chr4_4:52568411-52568430 None:intergenic 35.0%
ATAGGAATATGAGGAAATGG+AGG - chr4_4:52568426-52568445 None:intergenic 35.0%
GGTTTGTAGATAGGAATATG+AGG - chr4_4:52568435-52568454 None:intergenic 35.0%
TAGATGGGAATATGAGGAAA+GGG - chr4_4:52568459-52568478 None:intergenic 35.0%
TTCTTGTAGATGGGAATATG+AGG - chr4_4:52568465-52568484 None:intergenic 35.0%
! TTTTCATATATAGGCACAGG+TGG - chr4_4:52568498-52568517 None:intergenic 35.0%
! GGTTTTTCATATATAGGCAC+AGG - chr4_4:52568501-52568520 None:intergenic 35.0%
GGAAGAGGTTTATGATATAC+AGG - chr4_4:52568672-52568691 None:intergenic 35.0%
ACTACTGGAGGCTTATATAT+TGG - chr4_4:52568969-52568988 None:intergenic 35.0%
GGTTTGTAAATTGGAACAAC+CGG - chr4_4:52569005-52569024 None:intergenic 35.0%
! ACAACTGGTGGTTTGTAAAT+TGG - chr4_4:52569014-52569033 None:intergenic 35.0%
! TTTTTCCATCACCCTAAGTA+TGG + chr4_4:52569134-52569153 Msa0687650:CDS 35.0%
! ATTTTCCATACTTAGGGTGA+TGG - chr4_4:52569142-52569161 None:intergenic 35.0%
ATCACCCTAAGTATGGAAAA+TGG + chr4_4:52569141-52569160 Msa0687650:CDS 35.0%
! ATTTTCCAAAATACTTGGGG+TGG - chr4_4:52569196-52569215 None:intergenic 35.0%
!! ACCCCAAGTATTTTGGAAAA+TGG + chr4_4:52569195-52569214 Msa0687650:CDS 35.0%
!! GCCATTTTCCAAAATACTTG+GGG - chr4_4:52569199-52569218 None:intergenic 35.0%
!! GGCCATTTTCCAAAATACTT+GGG - chr4_4:52569200-52569219 None:intergenic 35.0%
!! TGGCCATTTTCCAAAATACT+TGG - chr4_4:52569201-52569220 None:intergenic 35.0%
! AGGCTTTTTGGATTAATTGG+TGG - chr4_4:52569272-52569291 None:intergenic 35.0%
TAATTATGAGGACTTAGTGG+AGG - chr4_4:52569323-52569342 None:intergenic 35.0%
AAGAACCTCACATGGTTCAA+AGG - chr4_4:52567131-52567150 None:intergenic 40.0%
GAGAAGCTACTAAGCTTCTT+TGG - chr4_4:52567253-52567272 None:intergenic 40.0%
!! AAGAGCACAAAAGTGCTCTT+TGG - chr4_4:52567336-52567355 None:intergenic 40.0%
!!! AAAGAGCACTTTTGTGCTCT+TGG + chr4_4:52567335-52567354 Msa0687650:CDS 40.0%
!! GTACTAGGTTTTTGCTATGG+TGG + chr4_4:52567376-52567395 Msa0687650:CDS 40.0%
CAACTACCTCAACTGTACTA+TGG - chr4_4:52567405-52567424 None:intergenic 40.0%
CATAGTACAGTTGAGGTAGT+TGG + chr4_4:52567403-52567422 Msa0687650:CDS 40.0%
! GTGGACAGATGATAATGCAT+AGG + chr4_4:52567621-52567640 Msa0687650:intron 40.0%
!!! CATTTTAAAACAAGAGGGGC+AGG + chr4_4:52568015-52568034 Msa0687650:CDS 40.0%
GCAGGTGAGCTTGATAAAAA+AGG + chr4_4:52568033-52568052 Msa0687650:CDS 40.0%
GAAGAGAGGCCAAAAGAATT+TGG - chr4_4:52568274-52568293 None:intergenic 40.0%
TGAGGATGCTTAGGAAAAAG+AGG - chr4_4:52568303-52568322 None:intergenic 40.0%
AAATCAGGATGAGGATGCTT+AGG - chr4_4:52568312-52568331 None:intergenic 40.0%
! AAAACTTTAGGGGGGAATTG+AGG - chr4_4:52568336-52568355 None:intergenic 40.0%
! ATGGTGGAAAAACTTTAGGG+GGG - chr4_4:52568344-52568363 None:intergenic 40.0%
!! GAGGAAAAAGAGGGTGTTTA+TGG - chr4_4:52568383-52568402 None:intergenic 40.0%
TAGGAACAGGAGGAAAAAGA+GGG - chr4_4:52568392-52568411 None:intergenic 40.0%
ATAGGAACAGGAGGAAAAAG+AGG - chr4_4:52568393-52568412 None:intergenic 40.0%
TTCTTGTAGATAGGAACAGG+AGG - chr4_4:52568402-52568421 None:intergenic 40.0%
GGTTTCTTGTAGATAGGAAC+AGG - chr4_4:52568405-52568424 None:intergenic 40.0%
GTAGATGGGAATATGAGGAA+AGG - chr4_4:52568460-52568479 None:intergenic 40.0%
TTCTCATAAACAGGTGTAGG+AGG - chr4_4:52568531-52568550 None:intergenic 40.0%
GGTTTCTCATAAACAGGTGT+AGG - chr4_4:52568534-52568553 None:intergenic 40.0%
GGAAGAGGTTTCTCATAAAC+AGG - chr4_4:52568540-52568559 None:intergenic 40.0%
TTATGATATACAGGCGTAGG+TGG - chr4_4:52568663-52568682 None:intergenic 40.0%
GGTTTATGATATACAGGCGT+AGG - chr4_4:52568666-52568685 None:intergenic 40.0%
AAAACTGGATGCTCAACCTT+TGG - chr4_4:52568834-52568853 None:intergenic 40.0%
TGGAGGTTTGTATACTGGAA+CGG - chr4_4:52568862-52568881 None:intergenic 40.0%
GGCTTATATATTGGAACAGG+TGG - chr4_4:52568960-52568979 None:intergenic 40.0%
GGAGGCTTATATATTGGAAC+AGG - chr4_4:52568963-52568982 None:intergenic 40.0%
AGTAGTAATTCCAAAGCCAC+CGG + chr4_4:52568983-52569002 Msa0687650:CDS 40.0%
TTGTAAATTGGAACAACCGG+TGG - chr4_4:52569002-52569021 None:intergenic 40.0%
TTGAATGGAGGAAGAACAAC+TGG - chr4_4:52569029-52569048 None:intergenic 40.0%
TGATGGAAAAAGCTCTTTGG+AGG - chr4_4:52569083-52569102 None:intergenic 40.0%
! TTTTTCCATCACCCCAAGTT+TGG + chr4_4:52569092-52569111 Msa0687650:CDS 40.0%
! ATTTTCCAAACTTGGGGTGA+TGG - chr4_4:52569100-52569119 None:intergenic 40.0%
! GAGGCAATTTTCCAAACTTG+GGG - chr4_4:52569106-52569125 None:intergenic 40.0%
! GGAGGCAATTTTCCAAACTT+GGG - chr4_4:52569107-52569126 None:intergenic 40.0%
! TGGAGGCAATTTTCCAAACT+TGG - chr4_4:52569108-52569127 None:intergenic 40.0%
TGATGGAAAAAGCTCTTTGG+AGG - chr4_4:52569083-52569102 None:intergenic 40.0%
!! GAGGCCATTTTCCATACTTA+GGG - chr4_4:52569148-52569167 None:intergenic 40.0%
AAGAAGCTCTTATGAGGGAT+TGG - chr4_4:52569224-52569243 None:intergenic 40.0%
GATGGAAGAAGCTCTTATGA+GGG - chr4_4:52569229-52569248 None:intergenic 40.0%
TGATGGAAGAAGCTCTTATG+AGG - chr4_4:52569230-52569249 None:intergenic 40.0%
TTCTTCCATCACCCAAAGTT+TGG + chr4_4:52569239-52569258 Msa0687650:CDS 40.0%
ACTTTCCAAACTTTGGGTGA+TGG - chr4_4:52569247-52569266 None:intergenic 40.0%
ATCACCCAAAGTTTGGAAAG+TGG + chr4_4:52569246-52569265 Msa0687650:CDS 40.0%
AAGAACCTCACATGGTTCAA+AGG - chr4_4:52567131-52567150 None:intergenic 40.0%
GAGAAGCTACTAAGCTTCTT+TGG - chr4_4:52567253-52567272 None:intergenic 40.0%
!! AAGAGCACAAAAGTGCTCTT+TGG - chr4_4:52567336-52567355 None:intergenic 40.0%
!!! AAAGAGCACTTTTGTGCTCT+TGG + chr4_4:52567335-52567354 Msa0687650:CDS 40.0%
!! GTACTAGGTTTTTGCTATGG+TGG + chr4_4:52567376-52567395 Msa0687650:CDS 40.0%
CAACTACCTCAACTGTACTA+TGG - chr4_4:52567405-52567424 None:intergenic 40.0%
CATAGTACAGTTGAGGTAGT+TGG + chr4_4:52567403-52567422 Msa0687650:CDS 40.0%
! GTGGACAGATGATAATGCAT+AGG + chr4_4:52567621-52567640 Msa0687650:intron 40.0%
!!! CATTTTAAAACAAGAGGGGC+AGG + chr4_4:52568015-52568034 Msa0687650:CDS 40.0%
GCAGGTGAGCTTGATAAAAA+AGG + chr4_4:52568033-52568052 Msa0687650:CDS 40.0%
GAAGAGAGGCCAAAAGAATT+TGG - chr4_4:52568274-52568293 None:intergenic 40.0%
TGAGGATGCTTAGGAAAAAG+AGG - chr4_4:52568303-52568322 None:intergenic 40.0%
AAATCAGGATGAGGATGCTT+AGG - chr4_4:52568312-52568331 None:intergenic 40.0%
! AAAACTTTAGGGGGGAATTG+AGG - chr4_4:52568336-52568355 None:intergenic 40.0%
! ATGGTGGAAAAACTTTAGGG+GGG - chr4_4:52568344-52568363 None:intergenic 40.0%
!! GAGGAAAAAGAGGGTGTTTA+TGG - chr4_4:52568383-52568402 None:intergenic 40.0%
TAGGAACAGGAGGAAAAAGA+GGG - chr4_4:52568392-52568411 None:intergenic 40.0%
ATAGGAACAGGAGGAAAAAG+AGG - chr4_4:52568393-52568412 None:intergenic 40.0%
TTCTTGTAGATAGGAACAGG+AGG - chr4_4:52568402-52568421 None:intergenic 40.0%
GGTTTCTTGTAGATAGGAAC+AGG - chr4_4:52568405-52568424 None:intergenic 40.0%
GTAGATGGGAATATGAGGAA+AGG - chr4_4:52568460-52568479 None:intergenic 40.0%
TTCTCATAAACAGGTGTAGG+AGG - chr4_4:52568531-52568550 None:intergenic 40.0%
GGTTTCTCATAAACAGGTGT+AGG - chr4_4:52568534-52568553 None:intergenic 40.0%
GGAAGAGGTTTCTCATAAAC+AGG - chr4_4:52568540-52568559 None:intergenic 40.0%
TTATGATATACAGGCGTAGG+TGG - chr4_4:52568663-52568682 None:intergenic 40.0%
GGTTTATGATATACAGGCGT+AGG - chr4_4:52568666-52568685 None:intergenic 40.0%
AAAACTGGATGCTCAACCTT+TGG - chr4_4:52568834-52568853 None:intergenic 40.0%
TGGAGGTTTGTATACTGGAA+CGG - chr4_4:52568862-52568881 None:intergenic 40.0%
GGCTTATATATTGGAACAGG+TGG - chr4_4:52568960-52568979 None:intergenic 40.0%
GGAGGCTTATATATTGGAAC+AGG - chr4_4:52568963-52568982 None:intergenic 40.0%
AGTAGTAATTCCAAAGCCAC+CGG + chr4_4:52568983-52569002 Msa0687650:CDS 40.0%
TTGTAAATTGGAACAACCGG+TGG - chr4_4:52569002-52569021 None:intergenic 40.0%
TTGAATGGAGGAAGAACAAC+TGG - chr4_4:52569029-52569048 None:intergenic 40.0%
TGATGGAAAAAGCTCTTTGG+AGG - chr4_4:52569083-52569102 None:intergenic 40.0%
! TTTTTCCATCACCCCAAGTT+TGG + chr4_4:52569092-52569111 Msa0687650:CDS 40.0%
! ATTTTCCAAACTTGGGGTGA+TGG - chr4_4:52569100-52569119 None:intergenic 40.0%
! GAGGCAATTTTCCAAACTTG+GGG - chr4_4:52569106-52569125 None:intergenic 40.0%
! GGAGGCAATTTTCCAAACTT+GGG - chr4_4:52569107-52569126 None:intergenic 40.0%
! TGGAGGCAATTTTCCAAACT+TGG - chr4_4:52569108-52569127 None:intergenic 40.0%
TGATGGAAAAAGCTCTTTGG+AGG - chr4_4:52569083-52569102 None:intergenic 40.0%
!! GAGGCCATTTTCCATACTTA+GGG - chr4_4:52569148-52569167 None:intergenic 40.0%
AAGAAGCTCTTATGAGGGAT+TGG - chr4_4:52569224-52569243 None:intergenic 40.0%
GATGGAAGAAGCTCTTATGA+GGG - chr4_4:52569229-52569248 None:intergenic 40.0%
TGATGGAAGAAGCTCTTATG+AGG - chr4_4:52569230-52569249 None:intergenic 40.0%
TTCTTCCATCACCCAAAGTT+TGG + chr4_4:52569239-52569258 Msa0687650:CDS 40.0%
ACTTTCCAAACTTTGGGTGA+TGG - chr4_4:52569247-52569266 None:intergenic 40.0%
ATCACCCAAAGTTTGGAAAG+TGG + chr4_4:52569246-52569265 Msa0687650:CDS 40.0%
AACCTCACATGGTTCAAAGG+TGG - chr4_4:52567128-52567147 None:intergenic 45.0%
TGGAGACCATAGTACAGTTG+AGG + chr4_4:52567396-52567415 Msa0687650:CDS 45.0%
! ACAAAGTACCTGAGAAAGCC+TGG - chr4_4:52567474-52567493 None:intergenic 45.0%
GAGAGGCCAAAAGAATTTGG+AGG - chr4_4:52568271-52568290 None:intergenic 45.0%
GGAAAGGGAGGTTTGTAGAT+AGG - chr4_4:52568444-52568463 None:intergenic 45.0%
ATGGGAATATGAGGAAAGGG+AGG - chr4_4:52568456-52568475 None:intergenic 45.0%
GGGCAAGGTTTCTTGTAGAT+GGG - chr4_4:52568474-52568493 None:intergenic 45.0%
AGGGCAAGGTTTCTTGTAGA+TGG - chr4_4:52568475-52568494 None:intergenic 45.0%
CATATATAGGCACAGGTGGA+GGG - chr4_4:52568494-52568513 None:intergenic 45.0%
TCATATATAGGCACAGGTGG+AGG - chr4_4:52568495-52568514 None:intergenic 45.0%
CATAAACAGGTGTAGGAGGA+GGG - chr4_4:52568527-52568546 None:intergenic 45.0%
TCATAAACAGGTGTAGGAGG+AGG - chr4_4:52568528-52568547 None:intergenic 45.0%
TTCTCATAGACAGGTGTAGG+TGG - chr4_4:52568564-52568583 None:intergenic 45.0%
GGTTTCTCATAGACAGGTGT+AGG - chr4_4:52568567-52568586 None:intergenic 45.0%
GGAAGAGGTTTCTCATAGAC+AGG - chr4_4:52568573-52568592 None:intergenic 45.0%
TTATGGTAAACAGGCACAGG+CGG - chr4_4:52568597-52568616 None:intergenic 45.0%
GGTTTATGGTAAACAGGCAC+AGG - chr4_4:52568600-52568619 None:intergenic 45.0%
GGGAGAGGTTTATGGTAAAC+AGG - chr4_4:52568606-52568625 None:intergenic 45.0%
TTCTCATACACAGGTGTAGG+TGG - chr4_4:52568630-52568649 None:intergenic 45.0%
GGTTTCTCATACACAGGTGT+AGG - chr4_4:52568633-52568652 None:intergenic 45.0%
GGAAGAGGTTTCTCATACAC+AGG - chr4_4:52568639-52568658 None:intergenic 45.0%
CATGGTTTCTTGACTGGAAC+AGG - chr4_4:52568699-52568718 None:intergenic 45.0%
ACTGGATGTTCAACCTTTGG+TGG - chr4_4:52568726-52568745 None:intergenic 45.0%
GGAACTGGATGTTCAACCTT+TGG - chr4_4:52568729-52568748 None:intergenic 45.0%
TCCAGTATACAAACCTCCTC+CGG + chr4_4:52568758-52568777 Msa0687650:CDS 45.0%
GGAGGTTTGTATACTGGAAC+GGG - chr4_4:52568861-52568880 None:intergenic 45.0%
TCCAGTATACAAACCTCCAC+CGG + chr4_4:52568863-52568882 Msa0687650:CDS 45.0%
GTGGACATGGTTTCTTGATC+GGG - chr4_4:52568914-52568933 None:intergenic 45.0%
GGTGGACATGGTTTCTTGAT+CGG - chr4_4:52568915-52568934 None:intergenic 45.0%
! TGCTCAATCTTTGGTGGACA+TGG - chr4_4:52568927-52568946 None:intergenic 45.0%
AGAACTGGGTGCTCAATCTT+TGG - chr4_4:52568936-52568955 None:intergenic 45.0%
TTGGAACAGGTGGTAGAACT+GGG - chr4_4:52568950-52568969 None:intergenic 45.0%
ATTGGAACAGGTGGTAGAAC+TGG - chr4_4:52568951-52568970 None:intergenic 45.0%
!! GGCTTTGGAATTACTACTGG+AGG - chr4_4:52568981-52569000 None:intergenic 45.0%
!! GGTGGCTTTGGAATTACTAC+TGG - chr4_4:52568984-52569003 None:intergenic 45.0%
AATGGAGGAAGAACAACTGG+TGG - chr4_4:52569026-52569045 None:intergenic 45.0%
CATGGTGGTTTCTTGAATGG+AGG - chr4_4:52569041-52569060 None:intergenic 45.0%
GGACATGGTGGTTTCTTGAA+TGG - chr4_4:52569044-52569063 None:intergenic 45.0%
!! GGGTGATGGAAAAAGCTCTT+TGG - chr4_4:52569086-52569105 None:intergenic 45.0%
!! GGGTGATGGAAAAAGCTCTT+TGG - chr4_4:52569086-52569105 None:intergenic 45.0%
!! GGAGGCCATTTTCCATACTT+AGG - chr4_4:52569149-52569168 None:intergenic 45.0%
! AAGAAGCTCTTTGGAGGCAA+TGG - chr4_4:52569170-52569189 None:intergenic 45.0%
! TTCCACCACCCCAAGTATTT+TGG + chr4_4:52569188-52569207 Msa0687650:CDS 45.0%
TTCCAAAATACTTGGGGTGG+TGG - chr4_4:52569193-52569212 None:intergenic 45.0%
AAGCTCTTATGAGGGATTGG+TGG - chr4_4:52569221-52569240 None:intergenic 45.0%
! GTGGCCACTTTCCAAACTTT+GGG - chr4_4:52569253-52569272 None:intergenic 45.0%
ATGATCCAAACTTGGGGTGA+TGG - chr4_4:52569298-52569317 None:intergenic 45.0%
ATCACCCCAAGTTTGGATCA+TGG + chr4_4:52569297-52569316 Msa0687650:CDS 45.0%
AACCTCACATGGTTCAAAGG+TGG - chr4_4:52567128-52567147 None:intergenic 45.0%
TGGAGACCATAGTACAGTTG+AGG + chr4_4:52567396-52567415 Msa0687650:CDS 45.0%
! ACAAAGTACCTGAGAAAGCC+TGG - chr4_4:52567474-52567493 None:intergenic 45.0%
GAGAGGCCAAAAGAATTTGG+AGG - chr4_4:52568271-52568290 None:intergenic 45.0%
GGAAAGGGAGGTTTGTAGAT+AGG - chr4_4:52568444-52568463 None:intergenic 45.0%
ATGGGAATATGAGGAAAGGG+AGG - chr4_4:52568456-52568475 None:intergenic 45.0%
GGGCAAGGTTTCTTGTAGAT+GGG - chr4_4:52568474-52568493 None:intergenic 45.0%
AGGGCAAGGTTTCTTGTAGA+TGG - chr4_4:52568475-52568494 None:intergenic 45.0%
CATATATAGGCACAGGTGGA+GGG - chr4_4:52568494-52568513 None:intergenic 45.0%
TCATATATAGGCACAGGTGG+AGG - chr4_4:52568495-52568514 None:intergenic 45.0%
CATAAACAGGTGTAGGAGGA+GGG - chr4_4:52568527-52568546 None:intergenic 45.0%
TCATAAACAGGTGTAGGAGG+AGG - chr4_4:52568528-52568547 None:intergenic 45.0%
TTCTCATAGACAGGTGTAGG+TGG - chr4_4:52568564-52568583 None:intergenic 45.0%
GGTTTCTCATAGACAGGTGT+AGG - chr4_4:52568567-52568586 None:intergenic 45.0%
GGAAGAGGTTTCTCATAGAC+AGG - chr4_4:52568573-52568592 None:intergenic 45.0%
TTATGGTAAACAGGCACAGG+CGG - chr4_4:52568597-52568616 None:intergenic 45.0%
GGTTTATGGTAAACAGGCAC+AGG - chr4_4:52568600-52568619 None:intergenic 45.0%
GGGAGAGGTTTATGGTAAAC+AGG - chr4_4:52568606-52568625 None:intergenic 45.0%
TTCTCATACACAGGTGTAGG+TGG - chr4_4:52568630-52568649 None:intergenic 45.0%
GGTTTCTCATACACAGGTGT+AGG - chr4_4:52568633-52568652 None:intergenic 45.0%
GGAAGAGGTTTCTCATACAC+AGG - chr4_4:52568639-52568658 None:intergenic 45.0%
CATGGTTTCTTGACTGGAAC+AGG - chr4_4:52568699-52568718 None:intergenic 45.0%
ACTGGATGTTCAACCTTTGG+TGG - chr4_4:52568726-52568745 None:intergenic 45.0%
GGAACTGGATGTTCAACCTT+TGG - chr4_4:52568729-52568748 None:intergenic 45.0%
TCCAGTATACAAACCTCCTC+CGG + chr4_4:52568758-52568777 Msa0687650:CDS 45.0%
GGAGGTTTGTATACTGGAAC+GGG - chr4_4:52568861-52568880 None:intergenic 45.0%
TCCAGTATACAAACCTCCAC+CGG + chr4_4:52568863-52568882 Msa0687650:CDS 45.0%
GTGGACATGGTTTCTTGATC+GGG - chr4_4:52568914-52568933 None:intergenic 45.0%
GGTGGACATGGTTTCTTGAT+CGG - chr4_4:52568915-52568934 None:intergenic 45.0%
! TGCTCAATCTTTGGTGGACA+TGG - chr4_4:52568927-52568946 None:intergenic 45.0%
AGAACTGGGTGCTCAATCTT+TGG - chr4_4:52568936-52568955 None:intergenic 45.0%
TTGGAACAGGTGGTAGAACT+GGG - chr4_4:52568950-52568969 None:intergenic 45.0%
ATTGGAACAGGTGGTAGAAC+TGG - chr4_4:52568951-52568970 None:intergenic 45.0%
!! GGCTTTGGAATTACTACTGG+AGG - chr4_4:52568981-52569000 None:intergenic 45.0%
!! GGTGGCTTTGGAATTACTAC+TGG - chr4_4:52568984-52569003 None:intergenic 45.0%
AATGGAGGAAGAACAACTGG+TGG - chr4_4:52569026-52569045 None:intergenic 45.0%
CATGGTGGTTTCTTGAATGG+AGG - chr4_4:52569041-52569060 None:intergenic 45.0%
GGACATGGTGGTTTCTTGAA+TGG - chr4_4:52569044-52569063 None:intergenic 45.0%
!! GGGTGATGGAAAAAGCTCTT+TGG - chr4_4:52569086-52569105 None:intergenic 45.0%
!! GGGTGATGGAAAAAGCTCTT+TGG - chr4_4:52569086-52569105 None:intergenic 45.0%
!! GGAGGCCATTTTCCATACTT+AGG - chr4_4:52569149-52569168 None:intergenic 45.0%
! AAGAAGCTCTTTGGAGGCAA+TGG - chr4_4:52569170-52569189 None:intergenic 45.0%
! TTCCACCACCCCAAGTATTT+TGG + chr4_4:52569188-52569207 Msa0687650:CDS 45.0%
TTCCAAAATACTTGGGGTGG+TGG - chr4_4:52569193-52569212 None:intergenic 45.0%
AAGCTCTTATGAGGGATTGG+TGG - chr4_4:52569221-52569240 None:intergenic 45.0%
! GTGGCCACTTTCCAAACTTT+GGG - chr4_4:52569253-52569272 None:intergenic 45.0%
ATGATCCAAACTTGGGGTGA+TGG - chr4_4:52569298-52569317 None:intergenic 45.0%
ATCACCCCAAGTTTGGATCA+TGG + chr4_4:52569297-52569316 Msa0687650:CDS 45.0%
GTCCACCTTTGAACCATGTG+AGG + chr4_4:52567123-52567142 Msa0687650:five_prime_UTR 50.0%
ACAGTTGAGGTAGTTGGGCT+TGG + chr4_4:52567409-52567428 Msa0687650:CDS 50.0%
! AAGACTAGCCAGGCTTTCTC+AGG + chr4_4:52567463-52567482 Msa0687650:CDS 50.0%
! TTTTGCAGGCCATCATGAGC+AGG - chr4_4:52568156-52568175 None:intergenic 50.0%
ACCAGCAGCAGCAGTACTTA+GGG - chr4_4:52568220-52568239 None:intergenic 50.0%
TACCAGCAGCAGCAGTACTT+AGG - chr4_4:52568221-52568240 None:intergenic 50.0%
GGGGGGAATTGAGGTAAATC+AGG - chr4_4:52568327-52568346 None:intergenic 50.0%
TCATAGACAGGTGTAGGTGG+AGG - chr4_4:52568561-52568580 None:intergenic 50.0%
TAGGTGGAGGGAGAGGTTTA+TGG - chr4_4:52568614-52568633 None:intergenic 50.0%
CATACACAGGTGTAGGTGGA+GGG - chr4_4:52568626-52568645 None:intergenic 50.0%
TCATACACAGGTGTAGGTGG+AGG - chr4_4:52568627-52568646 None:intergenic 50.0%
TGATATACAGGCGTAGGTGG+AGG - chr4_4:52568660-52568679 None:intergenic 50.0%
TTCTTGACTGGAACAGGAGG+AGG - chr4_4:52568693-52568712 None:intergenic 50.0%
GGTTTCTTGACTGGAACAGG+AGG - chr4_4:52568696-52568715 None:intergenic 50.0%
GGTGGACATGGTTTCTTGAC+TGG - chr4_4:52568705-52568724 None:intergenic 50.0%
GAAACCATGTCCACCACCAA+AGG + chr4_4:52568710-52568729 Msa0687650:CDS 50.0%
!! TCAACCTTTGGTGGTGGACA+TGG - chr4_4:52568717-52568736 None:intergenic 50.0%
GGATGTTCAACCTTTGGTGG+TGG - chr4_4:52568723-52568742 None:intergenic 50.0%
TTGTATACTGGAGCAGGTGG+TGG - chr4_4:52568750-52568769 None:intergenic 50.0%
GGTTTGTATACTGGAGCAGG+TGG - chr4_4:52568753-52568772 None:intergenic 50.0%
GGAGGTTTGTATACTGGAGC+AGG - chr4_4:52568756-52568775 None:intergenic 50.0%
ACCGGAGGAGGTTTGTATAC+TGG - chr4_4:52568762-52568781 None:intergenic 50.0%
CATGGTTTCTTGACCGGAAC+CGG - chr4_4:52568804-52568823 None:intergenic 50.0%
GGTGGACATGGTTTCTTGAC+CGG - chr4_4:52568705-52568724 None:intergenic 50.0%
GAAACCATGTCCACCACCAA+AGG + chr4_4:52568710-52568729 Msa0687650:CDS 50.0%
!! TCAACCTTTGGTGGTGGACA+TGG - chr4_4:52568717-52568736 None:intergenic 50.0%
ACTGGATGCTCAACCTTTGG+TGG - chr4_4:52568831-52568850 None:intergenic 50.0%
ACTGGAACGGGTGGTAAAAC+TGG - chr4_4:52568849-52568868 None:intergenic 50.0%
GGTTTGTATACTGGAACGGG+TGG - chr4_4:52568858-52568877 None:intergenic 50.0%
ACCGGTGGAGGTTTGTATAC+TGG - chr4_4:52568867-52568886 None:intergenic 50.0%
CATGGTTTCTTGATCGGGAC+TGG - chr4_4:52568909-52568928 None:intergenic 50.0%
ACTGGGTGCTCAATCTTTGG+TGG - chr4_4:52568933-52568952 None:intergenic 50.0%
ATTGGAACAACCGGTGGCTT+TGG - chr4_4:52568996-52569015 None:intergenic 50.0%
AGAGTTGGAAGAGGTGGACA+TGG - chr4_4:52569059-52569078 None:intergenic 50.0%
TTTGGAGGCAGAGTTGGAAG+AGG - chr4_4:52569068-52569087 None:intergenic 50.0%
! AAGCTCTTTGGAGGCAGAGT+TGG - chr4_4:52569074-52569093 None:intergenic 50.0%
! AAGCTCTTTGGAGGCAATGG+AGG - chr4_4:52569167-52569186 None:intergenic 50.0%
TGGTGGAAGAAGCTCTTTGG+AGG - chr4_4:52569176-52569195 None:intergenic 50.0%
! GGTGGCCACTTTCCAAACTT+TGG - chr4_4:52569254-52569273 None:intergenic 50.0%
!!! GGGTGATGGAAGAGGCTTTT+TGG - chr4_4:52569284-52569303 None:intergenic 50.0%
!! CAAACTTGGGGTGATGGAAG+AGG - chr4_4:52569292-52569311 None:intergenic 50.0%
CTCTTCCATCACCCCAAGTT+TGG + chr4_4:52569290-52569309 Msa0687650:CDS 50.0%
GAGGCCATGATCCAAACTTG+GGG - chr4_4:52569304-52569323 None:intergenic 50.0%
GGAGGCCATGATCCAAACTT+GGG - chr4_4:52569305-52569324 None:intergenic 50.0%
TGGAGGCCATGATCCAAACT+TGG - chr4_4:52569306-52569325 None:intergenic 50.0%
GTCCACCTTTGAACCATGTG+AGG + chr4_4:52567123-52567142 Msa0687650:five_prime_UTR 50.0%
ACAGTTGAGGTAGTTGGGCT+TGG + chr4_4:52567409-52567428 Msa0687650:CDS 50.0%
! AAGACTAGCCAGGCTTTCTC+AGG + chr4_4:52567463-52567482 Msa0687650:CDS 50.0%
! TTTTGCAGGCCATCATGAGC+AGG - chr4_4:52568156-52568175 None:intergenic 50.0%
ACCAGCAGCAGCAGTACTTA+GGG - chr4_4:52568220-52568239 None:intergenic 50.0%
TACCAGCAGCAGCAGTACTT+AGG - chr4_4:52568221-52568240 None:intergenic 50.0%
GGGGGGAATTGAGGTAAATC+AGG - chr4_4:52568327-52568346 None:intergenic 50.0%
TCATAGACAGGTGTAGGTGG+AGG - chr4_4:52568561-52568580 None:intergenic 50.0%
TAGGTGGAGGGAGAGGTTTA+TGG - chr4_4:52568614-52568633 None:intergenic 50.0%
CATACACAGGTGTAGGTGGA+GGG - chr4_4:52568626-52568645 None:intergenic 50.0%
TCATACACAGGTGTAGGTGG+AGG - chr4_4:52568627-52568646 None:intergenic 50.0%
TGATATACAGGCGTAGGTGG+AGG - chr4_4:52568660-52568679 None:intergenic 50.0%
TTCTTGACTGGAACAGGAGG+AGG - chr4_4:52568693-52568712 None:intergenic 50.0%
GGTTTCTTGACTGGAACAGG+AGG - chr4_4:52568696-52568715 None:intergenic 50.0%
GGTGGACATGGTTTCTTGAC+TGG - chr4_4:52568705-52568724 None:intergenic 50.0%
GAAACCATGTCCACCACCAA+AGG + chr4_4:52568710-52568729 Msa0687650:CDS 50.0%
!! TCAACCTTTGGTGGTGGACA+TGG - chr4_4:52568717-52568736 None:intergenic 50.0%
GGATGTTCAACCTTTGGTGG+TGG - chr4_4:52568723-52568742 None:intergenic 50.0%
TTGTATACTGGAGCAGGTGG+TGG - chr4_4:52568750-52568769 None:intergenic 50.0%
GGTTTGTATACTGGAGCAGG+TGG - chr4_4:52568753-52568772 None:intergenic 50.0%
GGAGGTTTGTATACTGGAGC+AGG - chr4_4:52568756-52568775 None:intergenic 50.0%
ACCGGAGGAGGTTTGTATAC+TGG - chr4_4:52568762-52568781 None:intergenic 50.0%
CATGGTTTCTTGACCGGAAC+CGG - chr4_4:52568804-52568823 None:intergenic 50.0%
GGTGGACATGGTTTCTTGAC+CGG - chr4_4:52568705-52568724 None:intergenic 50.0%
GAAACCATGTCCACCACCAA+AGG + chr4_4:52568710-52568729 Msa0687650:CDS 50.0%
!! TCAACCTTTGGTGGTGGACA+TGG - chr4_4:52568717-52568736 None:intergenic 50.0%
ACTGGATGCTCAACCTTTGG+TGG - chr4_4:52568831-52568850 None:intergenic 50.0%
ACTGGAACGGGTGGTAAAAC+TGG - chr4_4:52568849-52568868 None:intergenic 50.0%
GGTTTGTATACTGGAACGGG+TGG - chr4_4:52568858-52568877 None:intergenic 50.0%
ACCGGTGGAGGTTTGTATAC+TGG - chr4_4:52568867-52568886 None:intergenic 50.0%
CATGGTTTCTTGATCGGGAC+TGG - chr4_4:52568909-52568928 None:intergenic 50.0%
ACTGGGTGCTCAATCTTTGG+TGG - chr4_4:52568933-52568952 None:intergenic 50.0%
ATTGGAACAACCGGTGGCTT+TGG - chr4_4:52568996-52569015 None:intergenic 50.0%
AGAGTTGGAAGAGGTGGACA+TGG - chr4_4:52569059-52569078 None:intergenic 50.0%
TTTGGAGGCAGAGTTGGAAG+AGG - chr4_4:52569068-52569087 None:intergenic 50.0%
! AAGCTCTTTGGAGGCAGAGT+TGG - chr4_4:52569074-52569093 None:intergenic 50.0%
! AAGCTCTTTGGAGGCAATGG+AGG - chr4_4:52569167-52569186 None:intergenic 50.0%
TGGTGGAAGAAGCTCTTTGG+AGG - chr4_4:52569176-52569195 None:intergenic 50.0%
! GGTGGCCACTTTCCAAACTT+TGG - chr4_4:52569254-52569273 None:intergenic 50.0%
!!! GGGTGATGGAAGAGGCTTTT+TGG - chr4_4:52569284-52569303 None:intergenic 50.0%
!! CAAACTTGGGGTGATGGAAG+AGG - chr4_4:52569292-52569311 None:intergenic 50.0%
CTCTTCCATCACCCCAAGTT+TGG + chr4_4:52569290-52569309 Msa0687650:CDS 50.0%
GAGGCCATGATCCAAACTTG+GGG - chr4_4:52569304-52569323 None:intergenic 50.0%
GGAGGCCATGATCCAAACTT+GGG - chr4_4:52569305-52569324 None:intergenic 50.0%
TGGAGGCCATGATCCAAACT+TGG - chr4_4:52569306-52569325 None:intergenic 50.0%
GCACCTTGTCCTGCTCATGA+TGG + chr4_4:52568144-52568163 Msa0687650:CDS 55.0%
AGGCCATCATGAGCAGGACA+AGG - chr4_4:52568150-52568169 None:intergenic 55.0%
! ACCCTAAGTACTGCTGCTGC+TGG + chr4_4:52568216-52568235 Msa0687650:CDS 55.0%
ACAGGTGTAGGAGGAGGGAT+AGG - chr4_4:52568522-52568541 None:intergenic 55.0%
ACAGGTGTAGGTGGAGGAAG+AGG - chr4_4:52568555-52568574 None:intergenic 55.0%
ACTGGAACAGGAGGAGGAAG+AGG - chr4_4:52568687-52568706 None:intergenic 55.0%
!! GGTGGTTGTGGCTTTGGAAC+CGG - chr4_4:52568780-52568799 None:intergenic 55.0%
TCCAAAGCCACAACCACCAC+CGG + chr4_4:52568782-52568801 Msa0687650:CDS 55.0%
GGATGCTCAACCTTTGGTGG+TGG - chr4_4:52568828-52568847 None:intergenic 55.0%
!! CAAACCTCCACCGGTTCCAA+AGG + chr4_4:52568872-52568891 Msa0687650:CDS 55.0%
!! GGTGGAAGTGCCTTTGGAAC+CGG - chr4_4:52568885-52568904 None:intergenic 55.0%
!! ACTGGTGGTGGAAGTGCCTT+TGG - chr4_4:52568891-52568910 None:intergenic 55.0%
! TTCTTGATCGGGACTGGTGG+TGG - chr4_4:52568903-52568922 None:intergenic 55.0%
GGTTTCTTGATCGGGACTGG+TGG - chr4_4:52568906-52568925 None:intergenic 55.0%
GTTGGAAGAGGTGGACATGG+TGG - chr4_4:52569056-52569075 None:intergenic 55.0%
!! GGGTGGTGGAAGAAGCTCTT+TGG - chr4_4:52569179-52569198 None:intergenic 55.0%
GCACCTTGTCCTGCTCATGA+TGG + chr4_4:52568144-52568163 Msa0687650:CDS 55.0%
AGGCCATCATGAGCAGGACA+AGG - chr4_4:52568150-52568169 None:intergenic 55.0%
! ACCCTAAGTACTGCTGCTGC+TGG + chr4_4:52568216-52568235 Msa0687650:CDS 55.0%
ACAGGTGTAGGAGGAGGGAT+AGG - chr4_4:52568522-52568541 None:intergenic 55.0%
ACAGGTGTAGGTGGAGGAAG+AGG - chr4_4:52568555-52568574 None:intergenic 55.0%
ACTGGAACAGGAGGAGGAAG+AGG - chr4_4:52568687-52568706 None:intergenic 55.0%
!! GGTGGTTGTGGCTTTGGAAC+CGG - chr4_4:52568780-52568799 None:intergenic 55.0%
TCCAAAGCCACAACCACCAC+CGG + chr4_4:52568782-52568801 Msa0687650:CDS 55.0%
GGATGCTCAACCTTTGGTGG+TGG - chr4_4:52568828-52568847 None:intergenic 55.0%
!! CAAACCTCCACCGGTTCCAA+AGG + chr4_4:52568872-52568891 Msa0687650:CDS 55.0%
!! GGTGGAAGTGCCTTTGGAAC+CGG - chr4_4:52568885-52568904 None:intergenic 55.0%
!! ACTGGTGGTGGAAGTGCCTT+TGG - chr4_4:52568891-52568910 None:intergenic 55.0%
! TTCTTGATCGGGACTGGTGG+TGG - chr4_4:52568903-52568922 None:intergenic 55.0%
GGTTTCTTGATCGGGACTGG+TGG - chr4_4:52568906-52568925 None:intergenic 55.0%
GTTGGAAGAGGTGGACATGG+TGG - chr4_4:52569056-52569075 None:intergenic 55.0%
!! GGGTGGTGGAAGAAGCTCTT+TGG - chr4_4:52569179-52569198 None:intergenic 55.0%
ATAGGCACAGGTGGAGGGCA+AGG - chr4_4:52568489-52568508 None:intergenic 60.0%
TGGTAAACAGGCACAGGCGG+AGG - chr4_4:52568594-52568613 None:intergenic 60.0%
ACAGGTGTAGGTGGAGGGAG+AGG - chr4_4:52568621-52568640 None:intergenic 60.0%
ACAGGCGTAGGTGGAGGAAG+AGG - chr4_4:52568654-52568673 None:intergenic 60.0%
!! ACTGGAGCAGGTGGTGGAAC+TGG - chr4_4:52568744-52568763 None:intergenic 60.0%
!! TGTGGCTTTGGAACCGGAGG+AGG - chr4_4:52568774-52568793 None:intergenic 60.0%
!! GGTTGTGGCTTTGGAACCGG+AGG - chr4_4:52568777-52568796 None:intergenic 60.0%
! ACCGGTGGTGGTTGTGGCTT+TGG - chr4_4:52568786-52568805 None:intergenic 60.0%
TTCTTGACCGGAACCGGTGG+TGG - chr4_4:52568798-52568817 None:intergenic 60.0%
GGTTTCTTGACCGGAACCGG+TGG - chr4_4:52568801-52568820 None:intergenic 60.0%
!! AGTGCCTTTGGAACCGGTGG+AGG - chr4_4:52568879-52568898 None:intergenic 60.0%
!! GGAAGTGCCTTTGGAACCGG+TGG - chr4_4:52568882-52568901 None:intergenic 60.0%
GGAGGCAGAGTTGGAAGAGG+TGG - chr4_4:52569065-52569084 None:intergenic 60.0%
ATAGGCACAGGTGGAGGGCA+AGG - chr4_4:52568489-52568508 None:intergenic 60.0%
TGGTAAACAGGCACAGGCGG+AGG - chr4_4:52568594-52568613 None:intergenic 60.0%
ACAGGTGTAGGTGGAGGGAG+AGG - chr4_4:52568621-52568640 None:intergenic 60.0%
ACAGGCGTAGGTGGAGGAAG+AGG - chr4_4:52568654-52568673 None:intergenic 60.0%
!! ACTGGAGCAGGTGGTGGAAC+TGG - chr4_4:52568744-52568763 None:intergenic 60.0%
!! TGTGGCTTTGGAACCGGAGG+AGG - chr4_4:52568774-52568793 None:intergenic 60.0%
!! GGTTGTGGCTTTGGAACCGG+AGG - chr4_4:52568777-52568796 None:intergenic 60.0%
! ACCGGTGGTGGTTGTGGCTT+TGG - chr4_4:52568786-52568805 None:intergenic 60.0%
TTCTTGACCGGAACCGGTGG+TGG - chr4_4:52568798-52568817 None:intergenic 60.0%
GGTTTCTTGACCGGAACCGG+TGG - chr4_4:52568801-52568820 None:intergenic 60.0%
!! AGTGCCTTTGGAACCGGTGG+AGG - chr4_4:52568879-52568898 None:intergenic 60.0%
!! GGAAGTGCCTTTGGAACCGG+TGG - chr4_4:52568882-52568901 None:intergenic 60.0%
GGAGGCAGAGTTGGAAGAGG+TGG - chr4_4:52569065-52569084 None:intergenic 60.0%
ACAGGCACAGGCGGAGGAAG+AGG - chr4_4:52568588-52568607 None:intergenic 65.0%
!! GCCACAACCACCACCGGTTC+CGG + chr4_4:52568788-52568807 Msa0687650:CDS 65.0%
! ACCGGAACCGGTGGTGGTTG+TGG - chr4_4:52568792-52568811 None:intergenic 65.0%
ACAGGCACAGGCGGAGGAAG+AGG - chr4_4:52568588-52568607 None:intergenic 65.0%
!! GCCACAACCACCACCGGTTC+CGG + chr4_4:52568788-52568807 Msa0687650:CDS 65.0%
! ACCGGAACCGGTGGTGGTTG+TGG - chr4_4:52568792-52568811 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 52567041 52569343 52567041 ID=Msa0687650;Name=Msa0687650
chr4_4 mRNA 52567041 52569343 52567041 ID=Msa0687650-mRNA-1;Parent=Msa0687650;Name=Msa0687650-mRNA-1;_AED=0.03;_eAED=0.03;_QI=272|1|0.5|1|1|1|2|0|512
chr4_4 exon 52567041 52567484 52567041 ID=Msa0687650-mRNA-1:exon:13776;Parent=Msa0687650-mRNA-1
chr4_4 exon 52567977 52569343 52567977 ID=Msa0687650-mRNA-1:exon:13777;Parent=Msa0687650-mRNA-1
chr4_4 five_prime_UTR 52567041 52567312 52567041 ID=Msa0687650-mRNA-1:five_prime_utr;Parent=Msa0687650-mRNA-1
chr4_4 CDS 52567313 52567484 52567313 ID=Msa0687650-mRNA-1:cds;Parent=Msa0687650-mRNA-1
chr4_4 CDS 52567977 52569343 52567977 ID=Msa0687650-mRNA-1:cds;Parent=Msa0687650-mRNA-1
Gene Sequence

>Msa0687650

ATGCAGATTTTCACTCTGCGCCAAAGAGCACTTTTGTGCTCTTGGCTGTTTGTTGTCTTTTTGGTACTAGGTTTTTGCTATGGTGGAGACCATAGTACAGTTGAGGTAGTTGGGCTTGGAGAATGCGCAGATTGCATTCAGAACAATATTAAGACTAGCCAGGCTTTCTCAGGGCTACATGTAACAATTGACTGCAAAGAAGCAAATGGACATTTTAAAACAAGAGGGGCAGGTGAGCTTGATAAAAAAGGAAATTTCAAAGTATCCCTTCCTCAAGAAATTGTAAAAGAAGGTGAACTGAAAGAAGAATGTTATGCTCAGCTACATAGTGCAACAGCTGCACCTTGTCCTGCTCATGATGGCCTGCAAAACACCAAAATTGTCATCAAGTCAAAATCTGATGACAAACACACCCTAAGTACTGCTGCTGCTGGTAAACTCAAATTTTCATCAGCAACATGTACCTCCAAATTCTTTTGGCCTCTCTTCAAACATCCTCTTTTTCCTAAGCATCCTCATCCTGATTTACCTCAATTCCCCCCTAAAGTTTTTCCACCATTTCCACCAAAGATTTTCCATAAACACCCTCTTTTTCCTCCTGTTCCTATCTACAAGAAACCTCCATTTCCTCATATTCCTATCTACAAACCTCCCTTTCCTCATATTCCCATCTACAAGAAACCTTGCCCTCCACCTGTGCCTATATATGAAAAACCTATCCCTCCTCCTACACCTGTTTATGAGAAACCTCTTCCTCCACCTACACCTGTCTATGAGAAACCTCTTCCTCCGCCTGTGCCTGTTTACCATAAACCTCTCCCTCCACCTACACCTGTGTATGAGAAACCTCTTCCTCCACCTACGCCTGTATATCATAAACCTCTTCCTCCTCCTGTTCCAGTCAAGAAACCATGTCCACCACCAAAGGTTGAACATCCAGTTCCACCACCTGCTCCAGTATACAAACCTCCTCCGGTTCCAAAGCCACAACCACCACCGGTTCCGGTCAAGAAACCATGTCCACCACCAAAGGTTGAGCATCCAGTTTTACCACCCGTTCCAGTATACAAACCTCCACCGGTTCCAAAGGCACTTCCACCACCAGTCCCGATCAAGAAACCATGTCCACCAAAGATTGAGCACCCAGTTCTACCACCTGTTCCAATATATAAGCCTCCAGTAGTAATTCCAAAGCCACCGGTTGTTCCAATTTACAAACCACCAGTTGTTCTTCCTCCATTCAAGAAACCACCATGTCCACCTCTTCCAACTCTGCCTCCAAAGAGCTTTTTCCATCACCCCAAGTTTGGAAAATTGCCTCCAAAGAGCTTTTTCCATCACCCTAAGTATGGAAAATGGCCTCCATTGCCTCCAAAGAGCTTCTTCCACCACCCCAAGTATTTTGGAAAATGGCCACCAATCCCTCATAAGAGCTTCTTCCATCACCCAAAGTTTGGAAAGTGGCCACCAATTAATCCAAAAAGCCTCTTCCATCACCCCAAGTTTGGATCATGGCCTCCACTAAGTCCTCATAATTAG

Protein sequence

>Msa0687650

MQIFTLRQRALLCSWLFVVFLVLGFCYGGDHSTVEVVGLGECADCIQNNIKTSQAFSGLHVTIDCKEANGHFKTRGAGELDKKGNFKVSLPQEIVKEGELKEECYAQLHSATAAPCPAHDGLQNTKIVIKSKSDDKHTLSTAAAGKLKFSSATCTSKFFWPLFKHPLFPKHPHPDLPQFPPKVFPPFPPKIFHKHPLFPPVPIYKKPPFPHIPIYKPPFPHIPIYKKPCPPPVPIYEKPIPPPTPVYEKPLPPPTPVYEKPLPPPVPVYHKPLPPPTPVYEKPLPPPTPVYHKPLPPPVPVKKPCPPPKVEHPVPPPAPVYKPPPVPKPQPPPVPVKKPCPPPKVEHPVLPPVPVYKPPPVPKALPPPVPIKKPCPPKIEHPVLPPVPIYKPPVVIPKPPVVPIYKPPVVLPPFKKPPCPPLPTLPPKSFFHHPKFGKLPPKSFFHHPKYGKWPPLPPKSFFHHPKYFGKWPPIPHKSFFHHPKFGKWPPINPKSLFHHPKFGSWPPLSPHN*