AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0934100


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0934100 MtrunA17_Chr6g0450641 98.187 331 4 2 1 329 1 331 0.0 652
Msa0934100 MtrunA17_Chr5g0413551 63.566 258 90 1 72 329 3 256 3.79e-122 351
Msa0934100 MtrunA17_Chr8g0365441 64.981 257 85 3 72 328 3 254 7.11e-120 345
Msa0934100 MtrunA17_Chr3g0117661 56.667 240 101 1 78 317 9 245 3.87e-96 285
Msa0934100 MtrunA17_Chr3g0117691 53.571 252 114 1 78 329 9 257 7.45e-95 282
Msa0934100 MtrunA17_Chr2g0279581 51.777 197 92 2 125 321 89 282 3.58e-68 215
Msa0934100 MtrunA17_Chr5g0427341 46.701 197 103 2 125 321 94 288 1.86e-58 190
Msa0934100 MtrunA17_Chr3g0117671 68.182 44 14 0 156 199 1 44 1.01e-16 73.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0934100 AT3G01500.3 67.751 338 98 4 1 329 1 336 1.72e-148 421
Msa0934100 AT3G01500.2 67.751 338 98 4 1 329 1 336 2.44e-148 421
Msa0934100 AT3G01500.4 74.615 260 64 2 71 329 1 259 2.35e-139 395
Msa0934100 AT3G01500.1 74.615 260 64 2 71 329 1 259 4.38e-139 395
Msa0934100 AT5G14740.1 69.057 265 81 1 65 329 68 331 3.75e-132 380
Msa0934100 AT5G14740.9 70.588 255 74 1 75 329 6 259 6.78e-132 376
Msa0934100 AT5G14740.8 70.588 255 74 1 75 329 6 259 6.78e-132 376
Msa0934100 AT5G14740.7 70.588 255 74 1 75 329 6 259 6.78e-132 376
Msa0934100 AT5G14740.2 70.588 255 74 1 75 329 6 259 6.78e-132 376
Msa0934100 AT5G14740.6 70.588 255 74 1 75 329 6 259 6.78e-132 376
Msa0934100 AT5G14740.4 68.679 265 81 2 65 329 68 330 1.26e-129 373
Msa0934100 AT5G14740.3 67.925 265 83 2 65 329 68 330 2.33e-128 370
Msa0934100 AT1G70410.3 58.824 255 100 2 75 328 6 256 2.66e-109 319
Msa0934100 AT1G70410.1 58.824 255 100 2 75 328 6 256 2.66e-109 319
Msa0934100 AT1G70410.2 57.795 263 105 3 68 328 20 278 3.68e-109 319
Msa0934100 AT1G23730.2 53.488 258 115 2 73 329 4 257 2.53e-100 296
Msa0934100 AT1G23730.1 53.488 258 115 2 73 329 4 257 2.53e-100 296
Msa0934100 AT5G14740.5 66.825 211 69 1 65 275 68 277 2.02e-98 293
Msa0934100 AT4G33580.3 40.741 270 154 4 58 324 16 282 1.14e-62 201
Msa0934100 AT4G33580.1 40.741 270 154 4 58 324 16 282 1.14e-62 201
Msa0934100 AT4G33580.2 40.590 271 154 5 58 324 16 283 8.88e-62 199
Msa0934100 AT1G58180.7 42.132 197 113 1 123 319 26 221 3.79e-51 170
Msa0934100 AT1G58180.3 42.132 197 113 1 123 319 26 221 3.79e-51 170
Msa0934100 AT1G58180.6 42.132 197 113 1 123 319 26 221 3.79e-51 170
Msa0934100 AT1G58180.2 42.132 197 113 1 123 319 77 272 1.42e-50 170
Msa0934100 AT1G58180.4 42.132 197 113 1 123 319 77 272 1.42e-50 170
Msa0934100 AT1G58180.1 41.538 195 98 2 123 317 77 255 1.51e-46 158
Msa0934100 AT1G58180.5 45.098 153 83 1 123 275 77 228 4.85e-39 139

Find 111 sgRNAs with CRISPR-Local

Find 269 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACCTTTGGTTACATTAAAA+TGG 0.130582 6_3:-3761883 Msa0934100:five_prime_UTR
TAGCAAACTGGCAGATTATT+TGG 0.156433 6_3:-3757174 Msa0934100:three_prime_UTR
GAGCTTTGGGGACTTGAATT+TGG 0.157327 6_3:-3757779 Msa0934100:CDS
AGAGAGACTAAAGCCGTTTA+TGG 0.187138 6_3:+3761776 None:intergenic
GCCTTCACCTTTGCCTTTGC+AGG 0.194024 6_3:+3758475 None:intergenic
TATATGAGAAACTATGAATT+TGG 0.197634 6_3:-3757353 Msa0934100:three_prime_UTR
CAGTGCTTGTGGTGGTATTA+AGG 0.198916 6_3:-3758911 Msa0934100:CDS
TCCTATCATCACCCTAGTTT+TGG 0.244811 6_3:-3761610 Msa0934100:intron
TCTGCCAGTTTGCTAGCTTA+TGG 0.285698 6_3:+3757182 None:intergenic
ATTGAGGAGTGGGTCAAAAT+TGG 0.295969 6_3:-3758502 Msa0934100:CDS
AACAAAACATTGGCACTAAA+AGG 0.320612 6_3:-3757833 Msa0934100:CDS
AGCTATAATCTCATGGTTAA+AGG 0.329081 6_3:-3757429 Msa0934100:three_prime_UTR
TATCATCTTAAATAAGAGTT+TGG 0.333284 6_3:-3757301 Msa0934100:three_prime_UTR
ACCTTTGGTTACATTAAAAT+GGG 0.337350 6_3:-3761882 Msa0934100:five_prime_UTR
CTTATGGAGAACAAGGAAAA+TGG 0.339322 6_3:+3757198 None:intergenic
AAACATGGAGATGCACCTTT+TGG 0.343398 6_3:-3758451 Msa0934100:CDS
ATAATATGATGAAAGTTTAT+AGG 0.352869 6_3:+3757384 None:intergenic
CCATAACCTTAAGGTCCCTT+TGG 0.355894 6_3:+3761997 None:intergenic
CCAAAGGGACCTTAAGGTTA+TGG 0.376245 6_3:-3761997 Msa0934100:five_prime_UTR
AGCAAACTGGCAGATTATTT+GGG 0.383349 6_3:-3757173 Msa0934100:three_prime_UTR
TTGAAACAAACCTGGTCATA+TGG 0.391246 6_3:+3759369 None:intergenic
GTCTCCAACATTGTGGTCAT+TGG 0.393541 6_3:-3758937 Msa0934100:CDS
AGTGCTTGTGGTGGTATTAA+GGG 0.402709 6_3:-3758910 Msa0934100:CDS
ACCAATCCCTCTCTCACAAA+TGG 0.406160 6_3:+3757857 None:intergenic
AGGGAAGTTAGAAGTGGAAG+AGG 0.416201 6_3:+3761674 None:intergenic
CAGGCAAAATATGCTGGAAC+TGG 0.423684 6_3:-3759099 Msa0934100:CDS
AAGATGTGGTCATTGATATA+TGG 0.428062 6_3:+3757724 None:intergenic
TTTAGATGAGGTTTGAATGT+TGG 0.429780 6_3:+3761953 None:intergenic
TTAAGAGATGCAGAAACAAT+AGG 0.430244 6_3:+3761708 None:intergenic
ATGTCTACCTCTTCCATAAA+CGG 0.431358 6_3:-3761789 Msa0934100:CDS
CCCATTTGTGAGAGAGGGAT+TGG 0.434089 6_3:-3757858 Msa0934100:CDS
TTGAGAAATCATAGAACAAA+AGG 0.441666 6_3:-3762042 Msa0934100:five_prime_UTR
GGCAATCCAAAGGGACCTTA+AGG 0.446488 6_3:-3762003 Msa0934100:five_prime_UTR
TGATGTGTTCCATGACCAAT+TGG 0.448562 6_3:+3761854 None:intergenic
GGTGATGATAGGAGAAGAAG+AGG 0.451477 6_3:+3761620 None:intergenic
CTCTCTGAGGCTTCAGATGT+TGG 0.455326 6_3:+3760056 None:intergenic
CCACAAAAGCTTCTCCTGGC+TGG 0.457745 6_3:+3759418 None:intergenic
GTGGAGTAGGCTCCATCAAA+TGG 0.464977 6_3:+3758874 None:intergenic
GCCTCAGAGAGGATCAAAAC+TGG 0.471392 6_3:-3760044 Msa0934100:CDS
AAGAGAGAAGAAATGGGAAA+GGG 0.478534 6_3:-3760475 Msa0934100:CDS
AGAGAATGACCATAACCTTA+AGG 0.482720 6_3:+3761988 None:intergenic
TTCTCCATAAGCTAGCAAAC+TGG 0.482838 6_3:-3757186 Msa0934100:three_prime_UTR
GAAGCCGTGAATGTTTCTCT+TGG 0.483322 6_3:-3757896 Msa0934100:CDS
AGCAAGAATCCAGCTTTGTA+TGG 0.484367 6_3:-3759888 Msa0934100:CDS
ACTAAAGCCGTTTATGGAAG+AGG 0.493880 6_3:+3761782 None:intergenic
CAAAATTGGTTTACCTGCAA+AGG 0.494116 6_3:-3758488 Msa0934100:CDS
TCACAAATGGGTAGGTAAGA+AGG 0.496271 6_3:+3757870 None:intergenic
TTAAAATGGGGATACCCAAT+TGG 0.496847 6_3:-3761869 Msa0934100:five_prime_UTR
ACCTACCCATTTGTGAGAGA+GGG 0.496970 6_3:-3757863 Msa0934100:CDS
TAGGGAGAAGACTGAATTGA+AGG 0.501912 6_3:-3760147 Msa0934100:CDS
ATTTCTCTTTCTTGAAGTGA+AGG 0.503283 6_3:+3760018 None:intergenic
CTGACCACAAAAGCTTCTCC+TGG 0.503569 6_3:+3759414 None:intergenic
ACCAAAACTAGGGTGATGAT+AGG 0.504113 6_3:+3761609 None:intergenic
GCTAGTTCACCATACAAAGC+TGG 0.504395 6_3:+3759879 None:intergenic
CCAATCCCTCTCTCACAAAT+GGG 0.504979 6_3:+3757858 None:intergenic
TTGTAACAGGCAAAATATGC+TGG 0.509487 6_3:-3759105 Msa0934100:intron
CATGGTTCCTCCATATGACC+AGG 0.520753 6_3:-3759379 Msa0934100:intron
GTGCTTGTGGTGGTATTAAG+GGG 0.524502 6_3:-3758909 Msa0934100:CDS
ATATATGGTTGATGTTCATA+CGG 0.533962 6_3:+3757739 None:intergenic
TTAGTGTATATACCAAAACT+AGG 0.538506 6_3:+3761598 None:intergenic
GTCATTGGACACAGTGCTTG+TGG 0.548047 6_3:-3758922 Msa0934100:CDS
ACCTGCAAAGGCAAAGGTGA+AGG 0.548551 6_3:-3758476 Msa0934100:CDS
TGGTTTACCTGCAAAGGCAA+AGG 0.549043 6_3:-3758482 Msa0934100:CDS
TGAAAACGAAAGTTAAGCTA+AGG 0.549996 6_3:+3761911 None:intergenic
AAGAGAAGGGAAGTTAGAAG+TGG 0.550503 6_3:+3761668 None:intergenic
GTATGCTGTTCTTCATCTCA+AGG 0.550648 6_3:-3759064 Msa0934100:intron
TACCTACCCATTTGTGAGAG+AGG 0.551671 6_3:-3757864 Msa0934100:CDS
CAGTGATTTCATTGAGGAGT+GGG 0.552604 6_3:-3758512 Msa0934100:CDS
TAAGAGAGAAGAAATGGGAA+AGG 0.555114 6_3:-3760476 Msa0934100:intron
GCAAAGGTGAAGGCAAAACA+TGG 0.559880 6_3:-3758466 Msa0934100:CDS
TGGAAGTCTAGCACATGAGA+TGG 0.560687 6_3:+3759438 None:intergenic
CAAGAACAAGGCAATCCAAA+GGG 0.560918 6_3:-3762012 Msa0934100:five_prime_UTR
CATTGGAAGCTATAATCTCA+TGG 0.561904 6_3:-3757436 Msa0934100:three_prime_UTR
TGGGGATACCCAATTGGTCA+TGG 0.564321 6_3:-3761863 Msa0934100:five_prime_UTR
CATGTGCTAGACTTCCAGCC+AGG 0.568493 6_3:-3759432 Msa0934100:CDS
ATACGGAGAAAGTTGAAGAA+AGG 0.569824 6_3:+3757756 None:intergenic
GTTTCCAAGAGAAACATTCA+CGG 0.575971 6_3:+3757892 None:intergenic
GGAACAACAGCATCAGCTGA+TGG 0.577121 6_3:-3760083 Msa0934100:CDS
GTTTGTCTTGAATAAGAGAA+GGG 0.577564 6_3:+3761655 None:intergenic
TTGCTAGCTTATGGAGAACA+AGG 0.584211 6_3:+3757191 None:intergenic
TCTATAGGTCTCCAACATTG+TGG 0.584256 6_3:-3758944 Msa0934100:intron
GGTCAGAAATGTTGCTAACA+TGG 0.584570 6_3:-3759397 Msa0934100:CDS
GGAAGTCTAGCACATGAGAT+GGG 0.587977 6_3:+3759439 None:intergenic
GGTTTGTCTTGAATAAGAGA+AGG 0.590039 6_3:+3761654 None:intergenic
GCAGTGATTTCATTGAGGAG+TGG 0.590746 6_3:-3758513 Msa0934100:intron
ATGAAGAACAGCATACTCAA+TGG 0.592490 6_3:+3759071 None:intergenic
ATAAGATGATACATTTGTGA+AGG 0.594046 6_3:-3762069 Msa0934100:five_prime_UTR
ATGTGGCCACGGTTCTACAT+TGG 0.595438 6_3:-3757453 Msa0934100:three_prime_UTR
CCTTTGGTTACATTAAAATG+GGG 0.596627 6_3:-3761881 Msa0934100:five_prime_UTR
TGTGTGCATAGCTCTCCAAA+AGG 0.602700 6_3:+3758436 None:intergenic
GGATACTATGACTTTGTGAA+AGG 0.603419 6_3:-3757809 Msa0934100:CDS
TAGTGTATATACCAAAACTA+GGG 0.608201 6_3:+3761599 None:intergenic
GATGTGTTCCATGACCAATT+GGG 0.610561 6_3:+3761855 None:intergenic
GAGCAAATTACAGCTCAGCT+AGG 0.613484 6_3:-3760104 Msa0934100:CDS
TTAGGTAAAAGATGTGGCCA+CGG 0.621466 6_3:-3757464 Msa0934100:intron
GGGATTGGTGAACAAAACAT+TGG 0.629368 6_3:-3757843 Msa0934100:CDS
ACAAGAACAAGGCAATCCAA+AGG 0.634465 6_3:-3762013 Msa0934100:five_prime_UTR
GTGTCCAATGACCACAATGT+TGG 0.636437 6_3:+3758933 None:intergenic
GCTATGCACACACTGTGAGA+AGG 0.643279 6_3:-3758425 Msa0934100:intron
ATACTTAGGTAATCAAGATG+TGG 0.649188 6_3:+3757710 None:intergenic
AAAACATTGGCACTAAAAGG+AGG 0.653225 6_3:-3757830 Msa0934100:CDS
AAACAAACCTGGTCATATGG+AGG 0.654141 6_3:+3759372 None:intergenic
ATAGTCATTGCATACCGGGG+GGG 0.655182 6_3:+3759845 None:intergenic
TTGTATGGTGAACTAGCCAA+AGG 0.656155 6_3:-3759873 Msa0934100:CDS
TCCCTCTCTCACAAATGGGT+AGG 0.656447 6_3:+3757862 None:intergenic
ATTGGACACAGTGCTTGTGG+TGG 0.669101 6_3:-3758919 Msa0934100:CDS
TGTGTGCAGTGATTTCATTG+AGG 0.680762 6_3:-3758518 Msa0934100:intron
AAAGGTAAATGACAAGAACA+AGG 0.700282 6_3:-3762024 Msa0934100:five_prime_UTR
CAACATCTGAAGCCTCAGAG+AGG 0.708925 6_3:-3760055 Msa0934100:CDS
TGTTTGTTAGGTAAAAGATG+TGG 0.720567 6_3:-3757470 Msa0934100:intron
TAGCTTCCAATGTAGAACCG+TGG 0.724891 6_3:+3757447 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTCCTAATAAAAATTTT+TGG + chr6_3:3758276-3758295 None:intergenic 10.0%
!!! CTAATATATAGTTTTAATTT+TGG + chr6_3:3758307-3758326 None:intergenic 10.0%
!! CAAAATTAAAACTATATATT+AGG - chr6_3:3758305-3758324 Msa0934100:intron 10.0%
!! TAGTATAATATTTCAAATAT+AGG - chr6_3:3759024-3759043 Msa0934100:intron 10.0%
!! AGTATAATATTTCAAATATA+GGG - chr6_3:3759025-3759044 Msa0934100:intron 10.0%
!! AAAGATATAAGTAATTATAA+AGG + chr6_3:3759229-3759248 None:intergenic 10.0%
!! ATATAAATTATACACAAAAA+AGG - chr6_3:3760031-3760050 Msa0934100:CDS 10.0%
!!! AATTTTACTATTGAATATTT+TGG - chr6_3:3760413-3760432 Msa0934100:intron 10.0%
!!! ATTTTACTATTGAATATTTT+GGG - chr6_3:3760414-3760433 Msa0934100:intron 10.0%
!! AAAGTAACATTATTATAATT+TGG + chr6_3:3761625-3761644 None:intergenic 10.0%
!!! AACTTTTTTAATAGAAGTTT+TGG + chr6_3:3757453-3757472 None:intergenic 15.0%
!!! GAAATTTAGAGTTAAATAAA+TGG - chr6_3:3757746-3757765 Msa0934100:exon 15.0%
!!! AAAAGTACAAATAGAATTTT+GGG + chr6_3:3758086-3758105 None:intergenic 15.0%
!!! AAAATTTTTGGTTTGTTATA+TGG + chr6_3:3758264-3758283 None:intergenic 15.0%
!!! ACAAACCAAAAATTTTTATT+AGG - chr6_3:3758268-3758287 Msa0934100:intron 15.0%
!!! ATTTGAAATTTTAGTCTTTA+TGG + chr6_3:3758593-3758612 None:intergenic 15.0%
!! TATATAATTATAATAGGAGA+AGG + chr6_3:3758794-3758813 None:intergenic 15.0%
!!! AAATAATTATCTTTGAAGTT+AGG + chr6_3:3758898-3758917 None:intergenic 15.0%
!! GTTAAAATCAAAATATTTGT+AGG + chr6_3:3759524-3759543 None:intergenic 15.0%
!!! ATATATGTTTAATTTGTAAC+AGG - chr6_3:3760072-3760091 Msa0934100:CDS 15.0%
!!! ACAATTTTTCATTTTTCTAT+AGG - chr6_3:3760231-3760250 Msa0934100:intron 15.0%
!!! TATTAGTCTTGATTTTTTAT+AGG - chr6_3:3761142-3761161 Msa0934100:intron 15.0%
!! ATAATATGATGAAAGTTTAT+AGG + chr6_3:3761809-3761828 None:intergenic 15.0%
!!! TTTTAATAGAAGTTTTGGTA+GGG + chr6_3:3757448-3757467 None:intergenic 20.0%
!!! TTTTTAATAGAAGTTTTGGT+AGG + chr6_3:3757449-3757468 None:intergenic 20.0%
!! ATATGTATATGTATATGTCA+TGG - chr6_3:3757843-3757862 Msa0934100:CDS 20.0%
!!! TAATTCCTTTTCTCAATAAT+AGG + chr6_3:3757994-3758013 None:intergenic 20.0%
!!! CAAAAGTACAAATAGAATTT+TGG + chr6_3:3758087-3758106 None:intergenic 20.0%
!!! CAAAATTCTATTTGTACTTT+TGG - chr6_3:3758085-3758104 Msa0934100:intron 20.0%
!! TCTTTAGCAATCTATTAAAT+TGG - chr6_3:3758164-3758183 Msa0934100:intron 20.0%
!!! TAGAAAAAACTAGTTTTGAA+TGG + chr6_3:3758424-3758443 None:intergenic 20.0%
!!! GATATGGTATACTTAATTTT+TGG + chr6_3:3758474-3758493 None:intergenic 20.0%
!! AGTAAATAAATAGTACTACA+AGG + chr6_3:3758517-3758536 None:intergenic 20.0%
!! TGTAGTACTATTTATTTACT+TGG - chr6_3:3758517-3758536 Msa0934100:intron 20.0%
!! TATGGTACATATGAAAAATA+TGG + chr6_3:3758575-3758594 None:intergenic 20.0%
!! TTTAGAGACGAATTTATATT+TGG + chr6_3:3759457-3759476 None:intergenic 20.0%
!! TCTATTTATAGTTAGATTGA+TGG + chr6_3:3760564-3760583 None:intergenic 20.0%
!! TTTATCAGTTGTAATTCAAA+TGG - chr6_3:3760903-3760922 Msa0934100:intron 20.0%
!!! TTATAAAAAATAAAGGGTGT+TGG + chr6_3:3761073-3761092 None:intergenic 20.0%
!! TATAAAAGTAAATGCTCAAA+AGG - chr6_3:3761088-3761107 Msa0934100:intron 20.0%
!! ATAAAAGTAAATGCTCAAAA+GGG - chr6_3:3761089-3761108 Msa0934100:intron 20.0%
!! AGCTCATAATTAATTAACAA+GGG + chr6_3:3761537-3761556 None:intergenic 20.0%
!! TAGCTCATAATTAATTAACA+AGG + chr6_3:3761538-3761557 None:intergenic 20.0%
!!! CCATCTACATTTATTTATTT+TGG + chr6_3:3761565-3761584 None:intergenic 20.0%
!! CCAAAATAAATAAATGTAGA+TGG - chr6_3:3761562-3761581 Msa0934100:intron 20.0%
!! TATATGAGAAACTATGAATT+TGG - chr6_3:3761837-3761856 Msa0934100:five_prime_UTR 20.0%
!! TATCATCTTAAATAAGAGTT+TGG - chr6_3:3761889-3761908 Msa0934100:five_prime_UTR 20.0%
!!! GAAGCAAAATTTTCAATATA+TGG - chr6_3:3761922-3761941 Msa0934100:five_prime_UTR 20.0%
! TTGAGAAATCATAGAACAAA+AGG - chr6_3:3757148-3757167 Msa0934100:three_prime_UTR 25.0%
! TACCTTTGGTTACATTAAAA+TGG - chr6_3:3757307-3757326 Msa0934100:three_prime_UTR 25.0%
! ACCTTTGGTTACATTAAAAT+GGG - chr6_3:3757308-3757327 Msa0934100:three_prime_UTR 25.0%
!!! TTTAATAGAAGTTTTGGTAG+GGG + chr6_3:3757447-3757466 None:intergenic 25.0%
! TAGTGTATATACCAAAACTA+GGG + chr6_3:3757594-3757613 None:intergenic 25.0%
! TTAGTGTATATACCAAAACT+AGG + chr6_3:3757595-3757614 None:intergenic 25.0%
! ATTCTTCTAATGTCATGTAT+TGG - chr6_3:3757658-3757677 Msa0934100:intron 25.0%
! TGTTTGATTCTTACATAAAG+TGG - chr6_3:3757809-3757828 Msa0934100:CDS 25.0%
! GTTTGATTCTTACATAAAGT+GGG - chr6_3:3757810-3757829 Msa0934100:CDS 25.0%
!!! ATATGTCATGGCATTTTTTA+AGG - chr6_3:3757855-3757874 Msa0934100:CDS 25.0%
! AAGTACCTATTATTGAGAAA+AGG - chr6_3:3757986-3758005 Msa0934100:intron 25.0%
! TTAAATTGGTGAGTTTAGTT+AGG - chr6_3:3758178-3758197 Msa0934100:intron 25.0%
!!! TATACTTAATTTTTGGTGTG+TGG + chr6_3:3758467-3758486 None:intergenic 25.0%
! AGAAAAGTTCAAATTGGATA+TGG + chr6_3:3758490-3758509 None:intergenic 25.0%
!!! ATCTTTTAAGAGAGAAGAAA+TGG - chr6_3:3758708-3758727 Msa0934100:intron 25.0%
!!! TCTTTTAAGAGAGAAGAAAT+GGG - chr6_3:3758709-3758728 Msa0934100:intron 25.0%
!! AGATTTACCTCAACAATTTT+TGG + chr6_3:3758765-3758784 None:intergenic 25.0%
! AATAAATAGTCATTGCATAC+CGG + chr6_3:3759353-3759372 None:intergenic 25.0%
! ATATTTGGTCAATAATTTCG+AGG + chr6_3:3759442-3759461 None:intergenic 25.0%
! TCCAATCAAATCAAATATCA+TGG - chr6_3:3759496-3759515 Msa0934100:intron 25.0%
!!! ACCATGATATTTGATTTGAT+TGG + chr6_3:3759500-3759519 None:intergenic 25.0%
! TGAAAATCAACATGATGTTA+TGG - chr6_3:3759554-3759573 Msa0934100:intron 25.0%
! AAACTGAAAAAAGAAAGCAA+AGG + chr6_3:3759699-3759718 None:intergenic 25.0%
!!! TGCTTTCTTTTTTCAGTTTA+TGG - chr6_3:3759700-3759719 Msa0934100:intron 25.0%
!!! AAGTCAAAAAGATGTTTTTG+TGG + chr6_3:3759851-3759870 None:intergenic 25.0%
! GAAAAAAAAAATGACTTACG+TGG + chr6_3:3760338-3760357 None:intergenic 25.0%
! GTGAACTATAAGACAAATAT+TGG + chr6_3:3760844-3760863 None:intergenic 25.0%
! GTTAAAATTTGAATTTGTGC+AGG - chr6_3:3761272-3761291 Msa0934100:intron 25.0%
!! ATATATGGTTGATGTTCATA+CGG + chr6_3:3761454-3761473 None:intergenic 25.0%
!!! ACATATAGTACATTTTAGAG+AGG + chr6_3:3761509-3761528 None:intergenic 25.0%
!! AGCTTTGTATAAATGATTGA+TGG + chr6_3:3761602-3761621 None:intergenic 25.0%
! TAAGAGCAAAGTGTAATTTA+TGG - chr6_3:3761669-3761688 Msa0934100:CDS 25.0%
! AACAAACAACAAAAACTTAG+TGG + chr6_3:3761708-3761727 None:intergenic 25.0%
!!! CTAAGTTTTTGTTGTTTGTT+AGG - chr6_3:3761708-3761727 Msa0934100:CDS 25.0%
! AGAAAAAAGAATACTTTCGT+AGG + chr6_3:3761964-3761983 None:intergenic 25.0%
AAAGGTAAATGACAAGAACA+AGG - chr6_3:3757166-3757185 Msa0934100:three_prime_UTR 30.0%
TTTAGATGAGGTTTGAATGT+TGG + chr6_3:3757240-3757259 None:intergenic 30.0%
CAAACCTCATCTAAAAAGAT+AGG - chr6_3:3757245-3757264 Msa0934100:three_prime_UTR 30.0%
! CATTCCTATCTTTTTAGATG+AGG + chr6_3:3757252-3757271 None:intergenic 30.0%
TGAAAACGAAAGTTAAGCTA+AGG + chr6_3:3757282-3757301 None:intergenic 30.0%
! TCGTTTTCATTATCTACCTT+TGG - chr6_3:3757293-3757312 Msa0934100:three_prime_UTR 30.0%
CCTTTGGTTACATTAAAATG+GGG - chr6_3:3757309-3757328 Msa0934100:three_prime_UTR 30.0%
TTAAGAGATGCAGAAACAAT+AGG + chr6_3:3757485-3757504 None:intergenic 30.0%
GTTTGTCTTGAATAAGAGAA+GGG + chr6_3:3757538-3757557 None:intergenic 30.0%
TACACTAAAACCAATACACT+TGG - chr6_3:3757607-3757626 Msa0934100:intron 30.0%
ACACTAAAACCAATACACTT+GGG - chr6_3:3757608-3757627 Msa0934100:intron 30.0%
ATTTCAATTCCCAAGTGTAT+TGG + chr6_3:3757620-3757639 None:intergenic 30.0%
AAGACAAAGATTTGCCATTA+GGG + chr6_3:3757948-3757967 None:intergenic 30.0%
AAAGACAAAGATTTGCCATT+AGG + chr6_3:3757949-3757968 None:intergenic 30.0%
GGTACTTAGCTATATACATT+GGG + chr6_3:3757973-3757992 None:intergenic 30.0%
AGGTACTTAGCTATATACAT+TGG + chr6_3:3757974-3757993 None:intergenic 30.0%
!! TCTAAAGTATAGTTTTCACG+TGG - chr6_3:3758125-3758144 Msa0934100:intron 30.0%
!! TAGGTGAATTTGACTTGTAT+AGG - chr6_3:3758324-3758343 Msa0934100:intron 30.0%
!! AGGTGAATTTGACTTGTATA+GGG - chr6_3:3758325-3758344 Msa0934100:intron 30.0%
TCACACTACTATAGAAGAAA+AGG - chr6_3:3758397-3758416 Msa0934100:intron 30.0%
AAGAACTCCAAAAATTGTTG+AGG - chr6_3:3758755-3758774 Msa0934100:intron 30.0%
ATTTCTCTTTCTTGAAGTGA+AGG + chr6_3:3759175-3759194 None:intergenic 30.0%
ATAAATAGTCATTGCATACC+GGG + chr6_3:3759352-3759371 None:intergenic 30.0%
! TGGTTAGAGTGAAATTTGTT+TGG - chr6_3:3759574-3759593 Msa0934100:intron 30.0%
AACATGCATCTATTTCATGT+TGG - chr6_3:3759958-3759977 Msa0934100:intron 30.0%
ACTTCAGATTGGATATATGT+CGG + chr6_3:3759987-3760006 None:intergenic 30.0%
! CTTTTGTCTTTTCCATTTGA+TGG - chr6_3:3760304-3760323 Msa0934100:intron 30.0%
TGTGAAAAATTTGACATGAG+AGG + chr6_3:3760389-3760408 None:intergenic 30.0%
TTAGTGCATGATTGGATTAA+CGG - chr6_3:3760450-3760469 Msa0934100:CDS 30.0%
GTTCAACCTATTTAATGTCT+AGG - chr6_3:3760602-3760621 Msa0934100:intron 30.0%
TCTCTTCCTAGACATTAAAT+AGG + chr6_3:3760611-3760630 None:intergenic 30.0%
ACTGCACACAACAAAATAAA+GGG + chr6_3:3760662-3760681 None:intergenic 30.0%
TGGATTTCACGAAATTTATG+TGG - chr6_3:3760923-3760942 Msa0934100:intron 30.0%
AACAAAACATTGGCACTAAA+AGG - chr6_3:3761357-3761376 Msa0934100:intron 30.0%
AAGATGTGGTCATTGATATA+TGG + chr6_3:3761469-3761488 None:intergenic 30.0%
ATACTTAGGTAATCAAGATG+TGG + chr6_3:3761483-3761502 None:intergenic 30.0%
!! TTTTAGAGAGGAGAATACTT+AGG + chr6_3:3761497-3761516 None:intergenic 30.0%
! TGTTTGTTAGGTAAAAGATG+TGG - chr6_3:3761720-3761739 Msa0934100:CDS 30.0%
AGCTATAATCTCATGGTTAA+AGG - chr6_3:3761761-3761780 Msa0934100:CDS 30.0%
AGAGAATGACCATAACCTTA+AGG + chr6_3:3757205-3757224 None:intergenic 35.0%
!! CCCCATTTTAATGTAACCAA+AGG + chr6_3:3757312-3757331 None:intergenic 35.0%
TTAAAATGGGGATACCCAAT+TGG - chr6_3:3757321-3757340 Msa0934100:three_prime_UTR 35.0%
ATGTCTACCTCTTCCATAAA+CGG - chr6_3:3757401-3757420 Msa0934100:three_prime_UTR 35.0%
GGTTTGTCTTGAATAAGAGA+AGG + chr6_3:3757539-3757558 None:intergenic 35.0%
CATAGTCGTACAAATGAACA+AGG + chr6_3:3757718-3757737 None:intergenic 35.0%
TGACATAATAGCGAGTCTAT+TGG - chr6_3:3757898-3757917 Msa0934100:CDS 35.0%
!!! GTCTATTGGTTTTGTGTCTT+TGG - chr6_3:3757912-3757931 Msa0934100:intron 35.0%
!! GGTTTTGTGTCTTTGGTTAT+TGG - chr6_3:3757919-3757938 Msa0934100:intron 35.0%
AGACAAAGATTTGCCATTAG+GGG + chr6_3:3757947-3757966 None:intergenic 35.0%
GTGAGTTTAGTTAGGTTTGA+GGG - chr6_3:3758186-3758205 Msa0934100:intron 35.0%
!! TTTGGTTTGTTATATGGTGC+TGG + chr6_3:3758258-3758277 None:intergenic 35.0%
!! GGTGAATTTGACTTGTATAG+GGG - chr6_3:3758326-3758345 Msa0934100:intron 35.0%
GAAGTGTGTGATTTAGTTAG+AGG - chr6_3:3758355-3758374 Msa0934100:intron 35.0%
GGTCTGAGAAAAGTTCAAAT+TGG + chr6_3:3758496-3758515 None:intergenic 35.0%
TAAGAGAGAAGAAATGGGAA+AGG - chr6_3:3758714-3758733 Msa0934100:intron 35.0%
AAGAGAGAAGAAATGGGAAA+GGG - chr6_3:3758715-3758734 Msa0934100:intron 35.0%
TAAATAGTCATTGCATACCG+GGG + chr6_3:3759351-3759370 None:intergenic 35.0%
AAAGCAAAGGAGAGAAAGTT+AGG + chr6_3:3759686-3759705 None:intergenic 35.0%
TTGAAACAAACCTGGTCATA+TGG + chr6_3:3759824-3759843 None:intergenic 35.0%
GTGGATAATTGAAACAAACC+TGG + chr6_3:3759832-3759851 None:intergenic 35.0%
ACACGATACATGTACATTGT+GGG - chr6_3:3759903-3759922 Msa0934100:intron 35.0%
TTGTAACAGGCAAAATATGC+TGG - chr6_3:3760085-3760104 Msa0934100:CDS 35.0%
ATGAAGAACAGCATACTCAA+TGG + chr6_3:3760122-3760141 None:intergenic 35.0%
AAAAATGACTTACGTGGAGT+AGG + chr6_3:3760332-3760351 None:intergenic 35.0%
GAAAAATTTGACATGAGAGG+TGG + chr6_3:3760386-3760405 None:intergenic 35.0%
CCAATCATGCACTAAATAGA+AGG + chr6_3:3760445-3760464 None:intergenic 35.0%
CCTTCTATTTAGTGCATGAT+TGG - chr6_3:3760442-3760461 Msa0934100:CDS 35.0%
CGGTAACTTTGACAAAATTG+CGG - chr6_3:3760470-3760489 Msa0934100:CDS 35.0%
CACTGCACACAACAAAATAA+AGG + chr6_3:3760663-3760682 None:intergenic 35.0%
! CAAAATTGGTTTACCTGCAA+AGG - chr6_3:3760702-3760721 Msa0934100:intron 35.0%
CAGCGATGATAAACAATGAT+TGG - chr6_3:3761220-3761239 Msa0934100:intron 35.0%
GTTTCCAAGAGAAACATTCA+CGG + chr6_3:3761301-3761320 None:intergenic 35.0%
AAAACATTGGCACTAAAAGG+AGG - chr6_3:3761360-3761379 Msa0934100:intron 35.0%
GGATACTATGACTTTGTGAA+AGG - chr6_3:3761381-3761400 Msa0934100:intron 35.0%
! TGAAAGGATCTTTTGAGCTT+TGG - chr6_3:3761397-3761416 Msa0934100:intron 35.0%
! GAAAGGATCTTTTGAGCTTT+GGG - chr6_3:3761398-3761417 Msa0934100:intron 35.0%
! AAAGGATCTTTTGAGCTTTG+GGG - chr6_3:3761399-3761418 Msa0934100:intron 35.0%
ATACGGAGAAAGTTGAAGAA+AGG + chr6_3:3761437-3761456 None:intergenic 35.0%
CATTGGAAGCTATAATCTCA+TGG - chr6_3:3761754-3761773 Msa0934100:CDS 35.0%
CTTATGGAGAACAAGGAAAA+TGG + chr6_3:3761995-3762014 None:intergenic 35.0%
TAGCAAACTGGCAGATTATT+TGG - chr6_3:3762016-3762035 Msa0934100:five_prime_UTR 35.0%
AGCAAACTGGCAGATTATTT+GGG - chr6_3:3762017-3762036 Msa0934100:five_prime_UTR 35.0%
ACAAGAACAAGGCAATCCAA+AGG - chr6_3:3757177-3757196 Msa0934100:three_prime_UTR 40.0%
CAAGAACAAGGCAATCCAAA+GGG - chr6_3:3757178-3757197 Msa0934100:three_prime_UTR 40.0%
GATGTGTTCCATGACCAATT+GGG + chr6_3:3757338-3757357 None:intergenic 40.0%
TGATGTGTTCCATGACCAAT+TGG + chr6_3:3757339-3757358 None:intergenic 40.0%
ACTAAAGCCGTTTATGGAAG+AGG + chr6_3:3757411-3757430 None:intergenic 40.0%
AGAGAGACTAAAGCCGTTTA+TGG + chr6_3:3757417-3757436 None:intergenic 40.0%
AAGAGAAGGGAAGTTAGAAG+TGG + chr6_3:3757525-3757544 None:intergenic 40.0%
GAAGAAGAGGAAGCAAAAAC+AGG + chr6_3:3757560-3757579 None:intergenic 40.0%
! TCCTATCATCACCCTAGTTT+TGG - chr6_3:3757580-3757599 Msa0934100:intron 40.0%
ACCAAAACTAGGGTGATGAT+AGG + chr6_3:3757584-3757603 None:intergenic 40.0%
GACAAAGATTTGCCATTAGG+GGG + chr6_3:3757946-3757965 None:intergenic 40.0%
GGTGAGTTTAGTTAGGTTTG+AGG - chr6_3:3758185-3758204 Msa0934100:intron 40.0%
!! GTTTGTTATATGGTGCTGGT+TGG + chr6_3:3758254-3758273 None:intergenic 40.0%
AACTAAATCACACACTTCCC+TGG + chr6_3:3758353-3758372 None:intergenic 40.0%
TAGGGAGAAGACTGAATTGA+AGG - chr6_3:3759043-3759062 Msa0934100:intron 40.0%
! AGCAAGAATCCAGCTTTGTA+TGG - chr6_3:3759302-3759321 Msa0934100:intron 40.0%
TTGTATGGTGAACTAGCCAA+AGG - chr6_3:3759317-3759336 Msa0934100:intron 40.0%
AAATAGTCATTGCATACCGG+GGG + chr6_3:3759350-3759369 None:intergenic 40.0%
GGTCAGAAATGTTGCTAACA+TGG - chr6_3:3759793-3759812 Msa0934100:intron 40.0%
AAACAAACCTGGTCATATGG+AGG + chr6_3:3759821-3759840 None:intergenic 40.0%
GACACGATACATGTACATTG+TGG - chr6_3:3759902-3759921 Msa0934100:intron 40.0%
GTAACACTGACACTTCAGAT+TGG + chr6_3:3759998-3760017 None:intergenic 40.0%
GTATGCTGTTCTTCATCTCA+AGG - chr6_3:3760126-3760145 Msa0934100:CDS 40.0%
TCTATAGGTCTCCAACATTG+TGG - chr6_3:3760246-3760265 Msa0934100:intron 40.0%
AGTGCTTGTGGTGGTATTAA+GGG - chr6_3:3760280-3760299 Msa0934100:intron 40.0%
TGGTGACTGTGGAAGAATTA+CGG + chr6_3:3760544-3760563 None:intergenic 40.0%
!! AGTTAGATTGATGGTGACTG+TGG + chr6_3:3760555-3760574 None:intergenic 40.0%
TGTGTGCAGTGATTTCATTG+AGG - chr6_3:3760672-3760691 Msa0934100:intron 40.0%
CAGTGATTTCATTGAGGAGT+GGG - chr6_3:3760678-3760697 Msa0934100:intron 40.0%
ATTGAGGAGTGGGTCAAAAT+TGG - chr6_3:3760688-3760707 Msa0934100:intron 40.0%
! AAACATGGAGATGCACCTTT+TGG - chr6_3:3760739-3760758 Msa0934100:intron 40.0%
TCACAAATGGGTAGGTAAGA+AGG + chr6_3:3761323-3761342 None:intergenic 40.0%
! GGGATTGGTGAACAAAACAT+TGG - chr6_3:3761347-3761366 Msa0934100:intron 40.0%
TTAGGTAAAAGATGTGGCCA+CGG - chr6_3:3761726-3761745 Msa0934100:CDS 40.0%
! TTGCTAGCTTATGGAGAACA+AGG + chr6_3:3762002-3762021 None:intergenic 40.0%
TTCTCCATAAGCTAGCAAAC+TGG - chr6_3:3762004-3762023 Msa0934100:five_prime_UTR 40.0%
CCATAACCTTAAGGTCCCTT+TGG + chr6_3:3757196-3757215 None:intergenic 45.0%
CCAAAGGGACCTTAAGGTTA+TGG - chr6_3:3757193-3757212 Msa0934100:three_prime_UTR 45.0%
AGGGAAGTTAGAAGTGGAAG+AGG + chr6_3:3757519-3757538 None:intergenic 45.0%
GGTGATGATAGGAGAAGAAG+AGG + chr6_3:3757573-3757592 None:intergenic 45.0%
TTGGTTATTGGTCCCCCTAA+TGG - chr6_3:3757931-3757950 Msa0934100:intron 45.0%
AGGTTTGAGGGACAAATGTG+TGG - chr6_3:3758198-3758217 Msa0934100:intron 45.0%
!! TTTGACTTGTATAGGGGACC+AGG - chr6_3:3758332-3758351 Msa0934100:intron 45.0%
!! TTGACTTGTATAGGGGACCA+GGG - chr6_3:3758333-3758352 Msa0934100:intron 45.0%
!!! CTCAACTTTTTCAGCTGCTG+TGG + chr6_3:3759069-3759088 None:intergenic 45.0%
GAGCAAATTACAGCTCAGCT+AGG - chr6_3:3759086-3759105 Msa0934100:CDS 45.0%
!! ACCAGTTTTGATCCTCTCTG+AGG + chr6_3:3759150-3759169 None:intergenic 45.0%
ACAAAGCTGGATTCTTGCTG+TGG + chr6_3:3759301-3759320 None:intergenic 45.0%
GCTAGTTCACCATACAAAGC+TGG + chr6_3:3759314-3759333 None:intergenic 45.0%
AATAGTCATTGCATACCGGG+GGG + chr6_3:3759349-3759368 None:intergenic 45.0%
GGAAGTCTAGCACATGAGAT+GGG + chr6_3:3759754-3759773 None:intergenic 45.0%
TGGAAGTCTAGCACATGAGA+TGG + chr6_3:3759755-3759774 None:intergenic 45.0%
!! TATCTCCACCGACTCAAACA+CGG - chr6_3:3759880-3759899 Msa0934100:CDS 45.0%
TATCGTGTCCGTGTTTGAGT+CGG + chr6_3:3759891-3759910 None:intergenic 45.0%
CAGGCAAAATATGCTGGAAC+TGG - chr6_3:3760091-3760110 Msa0934100:CDS 45.0%
GTCTCCAACATTGTGGTCAT+TGG - chr6_3:3760253-3760272 Msa0934100:intron 45.0%
GTGTCCAATGACCACAATGT+TGG + chr6_3:3760260-3760279 None:intergenic 45.0%
CAGTGCTTGTGGTGGTATTA+AGG - chr6_3:3760279-3760298 Msa0934100:intron 45.0%
GTGCTTGTGGTGGTATTAAG+GGG - chr6_3:3760281-3760300 Msa0934100:intron 45.0%
!! GGCACTAGAAAAGTTGGTGT+AGG + chr6_3:3760365-3760384 None:intergenic 45.0%
AGAGGTGGCACTAGAAAAGT+TGG + chr6_3:3760371-3760390 None:intergenic 45.0%
GCAGTGATTTCATTGAGGAG+TGG - chr6_3:3760677-3760696 Msa0934100:intron 45.0%
TGGTTTACCTGCAAAGGCAA+AGG - chr6_3:3760708-3760727 Msa0934100:intron 45.0%
GCAAAGGTGAAGGCAAAACA+TGG - chr6_3:3760724-3760743 Msa0934100:intron 45.0%
TGTGTGCATAGCTCTCCAAA+AGG + chr6_3:3760757-3760776 None:intergenic 45.0%
! CAAGCATGTTGCTTGTGGAT+TGG + chr6_3:3760810-3760829 None:intergenic 45.0%
TCCACAAGCAACATGCTTGA+TGG - chr6_3:3760811-3760830 Msa0934100:intron 45.0%
! TCCATCAAGCATGTTGCTTG+TGG + chr6_3:3760815-3760834 None:intergenic 45.0%
GAAGCCGTGAATGTTTCTCT+TGG - chr6_3:3761294-3761313 Msa0934100:intron 45.0%
TACCTACCCATTTGTGAGAG+AGG - chr6_3:3761326-3761345 Msa0934100:intron 45.0%
ACCTACCCATTTGTGAGAGA+GGG - chr6_3:3761327-3761346 Msa0934100:intron 45.0%
CCAATCCCTCTCTCACAAAT+GGG + chr6_3:3761335-3761354 None:intergenic 45.0%
ACCAATCCCTCTCTCACAAA+TGG + chr6_3:3761336-3761355 None:intergenic 45.0%
!! GAGCTTTGGGGACTTGAATT+TGG - chr6_3:3761411-3761430 Msa0934100:intron 45.0%
TAGCTTCCAATGTAGAACCG+TGG + chr6_3:3761746-3761765 None:intergenic 45.0%
!! TCTGCCAGTTTGCTAGCTTA+TGG + chr6_3:3762011-3762030 None:intergenic 45.0%
!! TGTTTATATATAATTATAAT+AGG + chr6_3:3758800-3758819 None:intergenic 5.0%
!!! TTACTTTTATAAAAAATAAA+GGG + chr6_3:3761079-3761098 None:intergenic 5.0%
!!! TTTACTTTTATAAAAAATAA+AGG + chr6_3:3761080-3761099 None:intergenic 5.0%
GGCAATCCAAAGGGACCTTA+AGG - chr6_3:3757187-3757206 Msa0934100:three_prime_UTR 50.0%
TGGGGATACCCAATTGGTCA+TGG - chr6_3:3757327-3757346 Msa0934100:three_prime_UTR 50.0%
GGAACAACAGCATCAGCTGA+TGG - chr6_3:3759107-3759126 Msa0934100:intron 50.0%
!! CTCTCTGAGGCTTCAGATGT+TGG + chr6_3:3759137-3759156 None:intergenic 50.0%
! CAACATCTGAAGCCTCAGAG+AGG - chr6_3:3759135-3759154 Msa0934100:intron 50.0%
GCCTCAGAGAGGATCAAAAC+TGG - chr6_3:3759146-3759165 Msa0934100:intron 50.0%
ATAGTCATTGCATACCGGGG+GGG + chr6_3:3759348-3759367 None:intergenic 50.0%
CTGACCACAAAAGCTTCTCC+TGG + chr6_3:3759779-3759798 None:intergenic 50.0%
CATGGTTCCTCCATATGACC+AGG - chr6_3:3759811-3759830 Msa0934100:intron 50.0%
GTCATTGGACACAGTGCTTG+TGG - chr6_3:3760268-3760287 Msa0934100:intron 50.0%
ATTGGACACAGTGCTTGTGG+TGG - chr6_3:3760271-3760290 Msa0934100:intron 50.0%
GTGGAGTAGGCTCCATCAAA+TGG + chr6_3:3760319-3760338 None:intergenic 50.0%
ACCTGCAAAGGCAAAGGTGA+AGG - chr6_3:3760714-3760733 Msa0934100:intron 50.0%
GCTATGCACACACTGTGAGA+AGG - chr6_3:3760765-3760784 Msa0934100:intron 50.0%
TCCCTCTCTCACAAATGGGT+AGG + chr6_3:3761331-3761350 None:intergenic 50.0%
CCCATTTGTGAGAGAGGGAT+TGG - chr6_3:3761332-3761351 Msa0934100:intron 50.0%
ATGTGGCCACGGTTCTACAT+TGG - chr6_3:3761737-3761756 Msa0934100:CDS 50.0%
CATGTGCTAGACTTCCAGCC+AGG - chr6_3:3759758-3759777 Msa0934100:intron 55.0%
CCACAAAAGCTTCTCCTGGC+TGG + chr6_3:3759775-3759794 None:intergenic 55.0%
! CCAGCCAGGAGAAGCTTTTG+TGG - chr6_3:3759772-3759791 Msa0934100:intron 55.0%
GCCTTCACCTTTGCCTTTGC+AGG + chr6_3:3760718-3760737 None:intergenic 55.0%
CGTGTCCGTGTTTGAGTCGG+TGG + chr6_3:3759888-3759907 None:intergenic 60.0%
CATTGCATACCGGGGGGGCT+TGG + chr6_3:3759343-3759362 None:intergenic 65.0%
AGCCAAAGGCCAAGCCCCCC+CGG - chr6_3:3759331-3759350 Msa0934100:intron 70.0%
! TACCGGGGGGGCTTGGCCTT+TGG + chr6_3:3759336-3759355 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 3757122 3762090 3757122 ID=Msa0934100;Name=Msa0934100
chr6_3 mRNA 3757122 3762090 3757122 ID=Msa0934100-mRNA-1;Parent=Msa0934100;Name=Msa0934100-mRNA-1;_AED=0.16;_eAED=0.16;_QI=279|1|1|1|0.88|0.8|10|420|329
chr6_3 exon 3757122 3757482 3757122 ID=Msa0934100-mRNA-1:exon:1153;Parent=Msa0934100-mRNA-1
chr6_3 exon 3757695 3757918 3757695 ID=Msa0934100-mRNA-1:exon:1152;Parent=Msa0934100-mRNA-1
chr6_3 exon 3758426 3758531 3758426 ID=Msa0934100-mRNA-1:exon:1151;Parent=Msa0934100-mRNA-1
chr6_3 exon 3758874 3758959 3758874 ID=Msa0934100-mRNA-1:exon:1150;Parent=Msa0934100-mRNA-1
chr6_3 exon 3759065 3759118 3759065 ID=Msa0934100-mRNA-1:exon:1149;Parent=Msa0934100-mRNA-1
chr6_3 exon 3759380 3759496 3759380 ID=Msa0934100-mRNA-1:exon:1148;Parent=Msa0934100-mRNA-1
chr6_3 exon 3759860 3759908 3759860 ID=Msa0934100-mRNA-1:exon:1147;Parent=Msa0934100-mRNA-1
chr6_3 exon 3760014 3760166 3760014 ID=Msa0934100-mRNA-1:exon:1146;Parent=Msa0934100-mRNA-1
chr6_3 exon 3760436 3760494 3760436 ID=Msa0934100-mRNA-1:exon:1145;Parent=Msa0934100-mRNA-1
chr6_3 exon 3761611 3762090 3761611 ID=Msa0934100-mRNA-1:exon:1144;Parent=Msa0934100-mRNA-1
chr6_3 five_prime_UTR 3761812 3762090 3761812 ID=Msa0934100-mRNA-1:five_prime_utr;Parent=Msa0934100-mRNA-1
chr6_3 CDS 3761611 3761811 3761611 ID=Msa0934100-mRNA-1:cds;Parent=Msa0934100-mRNA-1
chr6_3 CDS 3760436 3760494 3760436 ID=Msa0934100-mRNA-1:cds;Parent=Msa0934100-mRNA-1
chr6_3 CDS 3760014 3760166 3760014 ID=Msa0934100-mRNA-1:cds;Parent=Msa0934100-mRNA-1
chr6_3 CDS 3759860 3759908 3759860 ID=Msa0934100-mRNA-1:cds;Parent=Msa0934100-mRNA-1
chr6_3 CDS 3759380 3759496 3759380 ID=Msa0934100-mRNA-1:cds;Parent=Msa0934100-mRNA-1
chr6_3 CDS 3759065 3759118 3759065 ID=Msa0934100-mRNA-1:cds;Parent=Msa0934100-mRNA-1
chr6_3 CDS 3758874 3758959 3758874 ID=Msa0934100-mRNA-1:cds;Parent=Msa0934100-mRNA-1
chr6_3 CDS 3758426 3758531 3758426 ID=Msa0934100-mRNA-1:cds;Parent=Msa0934100-mRNA-1
chr6_3 CDS 3757754 3757918 3757754 ID=Msa0934100-mRNA-1:cds;Parent=Msa0934100-mRNA-1
chr6_3 three_prime_UTR 3757695 3757753 3757695 ID=Msa0934100-mRNA-1:three_prime_utr;Parent=Msa0934100-mRNA-1
chr6_3 three_prime_UTR 3757122 3757482 3757122 ID=Msa0934100-mRNA-1:three_prime_utr;Parent=Msa0934100-mRNA-1
Gene Sequence

>Msa0934100

ATGTCTACCTCTTCCATAAACGGCTTTAGTCTCTCTTCTTTGTCCCCTACCAAAACTTCTATTAAAAAAGTTACATTGAGACCTATTGTTTCTGCATCTCTTAACTCTTCTTCTTCCTCTTCCACTTCTAACTTCCCTTCTCTTATTCAAGACAAACCTGTTTTTGCTTCCTCTTCTTCTCCTATCATCACCCTAGTTTTGAGAGAAGAAATGGGAAAGGGCTATGATGAAGCTATTGAAGAACTCCAAAAATTGTTGAGGGAGAAGACTGAATTGAAGGCCACAGCAGCTGAAAAAGTTGAGCAAATTACAGCTCAGCTAGGAACAACAGCATCAGCTGATGGTGTTCCAACATCTGAAGCCTCAGAGAGGATCAAAACTGGTTTCCTTCACTTCAAGAAAGAGAAATATGACAAGAATCCAGCTTTGTATGGTGAACTAGCCAAAGGCCAAGCCCCCCCGTTTATGGTTTTTGCATGCTCAGACTCAAGAGTCTGCCCATCTCATGTGCTAGACTTCCAGCCAGGAGAAGCTTTTGTGGTCAGAAATGTTGCTAACATGGTTCCTCCATATGACCAGGCAAAATATGCTGGAACTGGATCTGCCATTGAGTATGCTGTTCTTCATCTCAAGGTCTCCAACATTGTGGTCATTGGACACAGTGCTTGTGGTGGTATTAAGGGGCTTTTGTCTTTTCCATTTGATGGAGCCTACTCCACTGATTTCATTGAGGAGTGGGTCAAAATTGGTTTACCTGCAAAGGCAAAGGTGAAGGCAAAACATGGAGATGCACCTTTTGGAGAGCTATGCACACACTGTGAGAAGGAAGCCGTGAATGTTTCTCTTGGAAACCTTCTTACCTACCCATTTGTGAGAGAGGGATTGGTGAACAAAACATTGGCACTAAAAGGAGGATACTATGACTTTGTGAAAGGATCTTTTGAGCTTTGGGGACTTGAATTTGGCCTTTCTTCAACTTTCTCCGTATGA

Protein sequence

>Msa0934100

MSTSSINGFSLSSLSPTKTSIKKVTLRPIVSASLNSSSSSSTSNFPSLIQDKPVFASSSSPIITLVLREEMGKGYDEAIEELQKLLREKTELKATAAEKVEQITAQLGTTASADGVPTSEASERIKTGFLHFKKEKYDKNPALYGELAKGQAPPFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPYDQAKYAGTGSAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGAYSTDFIEEWVKIGLPAKAKVKAKHGDAPFGELCTHCEKEAVNVSLGNLLTYPFVREGLVNKTLALKGGYYDFVKGSFELWGLEFGLSSTFSV*