AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0687740

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0687740 MtrunA17_Chr4g0038461 97.674 301 7 0 1 301 1 301 0.0 564
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0687740 AT2G21140.1 42.345 307 131 14 1 284 1 284 1.89e-42 154
Msa0687740 AT2G21140.1 49.091 165 50 9 301 457 180 318 1.35e-11 66.2
Msa0687740 AT4G38770.1 58.015 131 46 3 33 162 31 153 3.13e-39 148

Find 181 sgRNAs with CRISPR-Local

Find 498 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCACCACCCCAAGTATTT+TGG 0.149326 4_4:+52721796 Msa0687740:CDS
ACAACTGGTGGTTTGTAAAT+TGG 0.182003 4_4:-52721619 None:intergenic
GAGAAGCTACTAAGCTTCTT+TGG 0.262352 4_4:-52719858 None:intergenic
ACTACTGGAGGCTTATATAT+TGG 0.279939 4_4:-52721574 None:intergenic
AGTATTGATTGATCTGCTTT+AGG 0.293210 4_4:+52719891 Msa0687740:five_prime_UTR
GAAGAGAGGCCAAAAGAATT+TGG 0.300313 4_4:-52720879 None:intergenic
ACCGGTGGTGGTTGTGGCTT+TGG 0.311135 4_4:-52721391 None:intergenic
CTCTTCCATCACCCCAAGTT+TGG 0.325374 4_4:+52721898 Msa0687740:CDS
TTCTTCCATCACCCAAAGTT+TGG 0.326013 4_4:+52721847 Msa0687740:CDS
CATGTACCTCCAAATTCTTT+TGG 0.326491 4_4:+52720870 Msa0687740:CDS
ATTGGAACAACCGGTGGCTT+TGG 0.327984 4_4:-52721601 None:intergenic
GGGTGGTGGAAGAAGCTCTT+TGG 0.328567 4_4:-52721784 None:intergenic
CTTAAATTTCATTGTCGGTT+TGG 0.341172 4_4:+52719756 Msa0687740:five_prime_UTR
ACTGGAACGGGTGGTAAAAC+TGG 0.341382 4_4:-52721454 None:intergenic
ATCACCCTAAGTATGGAAAA+TGG 0.345887 4_4:+52721749 Msa0687740:CDS
TCCACTAAGTCCTCATAATT+AGG 0.348252 4_4:+52721930 Msa0687740:CDS
GGTGGTTGTGGCTTTGGAAC+CGG 0.357210 4_4:-52721385 None:intergenic
GTGGCCACTTTCCAAACTTT+GGG 0.360377 4_4:-52721858 None:intergenic
GGGTGTTTATGGAAAATCTT+TGG 0.361066 4_4:-52720977 None:intergenic
TGGAAAATCTTTGGTGGAAA+TGG 0.364399 4_4:-52720968 None:intergenic
ATTGGAACAGGTGGTAGAAC+TGG 0.374309 4_4:-52721556 None:intergenic
GGAAAGGGAGGTTTGTAGAT+AGG 0.379613 4_4:-52721049 None:intergenic
AGGGCAAGGTTTCTTGTAGA+TGG 0.383488 4_4:-52721080 None:intergenic
GGTGGCCACTTTCCAAACTT+TGG 0.388021 4_4:-52721859 None:intergenic
CATGGTTTCTTGACCGGAAC+CGG 0.393305 4_4:-52721409 None:intergenic
ATTTCATTGTCGGTTTGGTT+TGG 0.393582 4_4:+52719761 Msa0687740:five_prime_UTR
ACTGGTGGTGGAAGTGCCTT+TGG 0.394673 4_4:-52721496 None:intergenic
CATGGTTTCTTGACTGGAAC+AGG 0.398406 4_4:-52721304 None:intergenic
AAGAGCACAAAAGTGCTCTT+TGG 0.399281 4_4:-52719941 None:intergenic
ACCGGAGGAGGTTTGTATAC+TGG 0.407753 4_4:-52721367 None:intergenic
AGAACTGGGTGCTCAATCTT+TGG 0.407928 4_4:-52721541 None:intergenic
GTGGACATGGTTTCTTGATC+GGG 0.409936 4_4:-52721519 None:intergenic
ACCGGTGGAGGTTTGTATAC+TGG 0.412309 4_4:-52721472 None:intergenic
TACCAGCAGCAGCAGTACTT+AGG 0.413145 4_4:-52720826 None:intergenic
ACTGGAGCAGGTGGTGGAAC+TGG 0.413223 4_4:-52721349 None:intergenic
TGCTCAATCTTTGGTGGACA+TGG 0.421709 4_4:-52721532 None:intergenic
GCCACAACCACCACCGGTTC+CGG 0.423338 4_4:+52721396 Msa0687740:CDS
TAGATAGGAATATGAGGAAA+TGG 0.423815 4_4:-52721034 None:intergenic
TTCTTGATCGGGACTGGTGG+TGG 0.425402 4_4:-52721508 None:intergenic
CAACTACCTCAACTGTACTA+TGG 0.428844 4_4:-52720010 None:intergenic
GGTGGACATGGTTTCTTGAT+CGG 0.429905 4_4:-52721520 None:intergenic
ACAGGTGTAGGTGGAGGAAG+AGG 0.429970 4_4:-52721160 None:intergenic
GGGAGAGGTTTATGGTAAAC+AGG 0.430983 4_4:-52721211 None:intergenic
GGAACTGGATGTTCAACCTT+TGG 0.432776 4_4:-52721334 None:intergenic
AATGGAGGTTTCTTGTAGAT+AGG 0.434086 4_4:-52721016 None:intergenic
GGAAGAGGTTTCTCATAAAC+AGG 0.436457 4_4:-52721145 None:intergenic
GGTGGAAGTGCCTTTGGAAC+CGG 0.437983 4_4:-52721490 None:intergenic
AGGTTCTTAAATTTCATTGT+CGG 0.439658 4_4:+52719751 Msa0687740:five_prime_UTR
ACAGTTGAGGTAGTTGGGCT+TGG 0.440510 4_4:+52720017 Msa0687740:CDS
TTGAATGGAGGAAGAACAAC+TGG 0.443546 4_4:-52721634 None:intergenic
GGACATGGTGGTTTCTTGAA+TGG 0.444236 4_4:-52721649 None:intergenic
ACCGGAACCGGTGGTGGTTG+TGG 0.444913 4_4:-52721397 None:intergenic
GGTGGACATGGTTTCTTGAC+TGG 0.446271 4_4:-52721310 None:intergenic
TCATATATAGGCACAGGTGG+AGG 0.447385 4_4:-52721100 None:intergenic
TAGGTGGAGGGAGAGGTTTA+TGG 0.447625 4_4:-52721219 None:intergenic
CATGGTTTCTTGATCGGGAC+TGG 0.450738 4_4:-52721514 None:intergenic
GGTTTCTTGTAGATAGGAAC+AGG 0.451221 4_4:-52721010 None:intergenic
TGATGGAAGAAGCTCTTATG+AGG 0.451803 4_4:-52721835 None:intergenic
AAGACTAGCCAGGCTTTCTC+AGG 0.452806 4_4:+52720071 Msa0687740:CDS
ATAGTACAGTTGAGGTAGTT+GGG 0.453640 4_4:+52720012 Msa0687740:CDS
GGAAGAGGTTTATGATATAC+AGG 0.458760 4_4:-52721277 None:intergenic
AAATCAGGATGAGGATGCTT+AGG 0.459714 4_4:-52720917 None:intergenic
TTCTTGTAGATGGGAATATG+AGG 0.460426 4_4:-52721070 None:intergenic
AAGCTCTTTGGAGGCAGAGT+TGG 0.461018 4_4:-52721679 None:intergenic
ACAGGCACAGGCGGAGGAAG+AGG 0.461209 4_4:-52721193 None:intergenic
CATAGTACAGTTGAGGTAGT+TGG 0.461236 4_4:+52720011 Msa0687740:CDS
AGTGCCTTTGGAACCGGTGG+AGG 0.465214 4_4:-52721484 None:intergenic
GGTGGCTTTGGAATTACTAC+TGG 0.468914 4_4:-52721589 None:intergenic
TTCTTGACTGGAACAGGAGG+AGG 0.469362 4_4:-52721298 None:intergenic
ACCTAATTATGAGGACTTAG+TGG 0.469386 4_4:-52721931 None:intergenic
ATCACCCCAAGTTTGGATCA+TGG 0.469401 4_4:+52721905 Msa0687740:CDS
ATGATCCAAACTTGGGGTGA+TGG 0.472534 4_4:-52721903 None:intergenic
ACAGGTGTAGGAGGAGGGAT+AGG 0.473148 4_4:-52721127 None:intergenic
TGTGGCTTTGGAACCGGAGG+AGG 0.476133 4_4:-52721379 None:intergenic
ACTGGAACAGGAGGAGGAAG+AGG 0.480945 4_4:-52721292 None:intergenic
GGAGGCTTATATATTGGAAC+AGG 0.482206 4_4:-52721568 None:intergenic
ACCAGCAGCAGCAGTACTTA+GGG 0.485236 4_4:-52720825 None:intergenic
TTCCAAAATACTTGGGGTGG+TGG 0.485411 4_4:-52721798 None:intergenic
TGGAGGCCATGATCCAAACT+TGG 0.487208 4_4:-52721911 None:intergenic
TAGATGGGAATATGAGGAAA+GGG 0.489468 4_4:-52721064 None:intergenic
GCACCTTGTCCTGCTCATGA+TGG 0.491575 4_4:+52720752 Msa0687740:CDS
AAAACTGGATGCTCAACCTT+TGG 0.492655 4_4:-52721439 None:intergenic
GGAGGTTTGTATACTGGAAC+GGG 0.495970 4_4:-52721466 None:intergenic
TCAACCTTTGGTGGTGGACA+TGG 0.497538 4_4:-52721427 None:intergenic
AAAAGAGCCACCTAATTATG+AGG 0.498709 4_4:-52721940 None:intergenic
TCAACCTTTGGTGGTGGACA+TGG 0.500021 4_4:-52721322 None:intergenic
GGTGGACATGGTTTCTTGAC+CGG 0.505845 4_4:-52721415 None:intergenic
CCTCAAGAAATTGTAAAAGA+AGG 0.509177 4_4:+52720683 Msa0687740:CDS
AAGAAGCTCTTATGAGGGAT+TGG 0.509685 4_4:-52721829 None:intergenic
GGTTTGTAGATAGGAATATG+AGG 0.511489 4_4:-52721040 None:intergenic
ATTGACTGCAAAGAAGCAAA+TGG 0.512954 4_4:+52720599 Msa0687740:CDS
ACAAAGTACCTGAGAAAGCC+TGG 0.513034 4_4:-52720079 None:intergenic
TTCTTGACCGGAACCGGTGG+TGG 0.513178 4_4:-52721403 None:intergenic
GTCTAATATATAAACAATGT+TGG 0.513532 4_4:-52719793 None:intergenic
GGAAGAGGTTTCTCATACAC+AGG 0.514773 4_4:-52721244 None:intergenic
GAACAATATTAAGACTAGCC+AGG 0.519758 4_4:+52720061 Msa0687740:CDS
CAAACTTGGGGTGATGGAAG+AGG 0.519949 4_4:-52721897 None:intergenic
TGGTGGAAGAAGCTCTTTGG+AGG 0.520821 4_4:-52721781 None:intergenic
GGAGGTTTGTATACTGGAGC+AGG 0.522258 4_4:-52721361 None:intergenic
AAGAAGCTCTTTGGAGGCAA+TGG 0.524273 4_4:-52721775 None:intergenic
TCCAGTATACAAACCTCCTC+CGG 0.524551 4_4:+52721366 Msa0687740:CDS
GGGCAAGGTTTCTTGTAGAT+GGG 0.525451 4_4:-52721079 None:intergenic
ACTTTCCAAACTTTGGGTGA+TGG 0.525688 4_4:-52721852 None:intergenic
GGAAGAGGTTTCTCATAGAC+AGG 0.529446 4_4:-52721178 None:intergenic
TCATAAACAGGTGTAGGAGG+AGG 0.529472 4_4:-52721133 None:intergenic
TGTTTATGGAAAATCTTTGG+TGG 0.529934 4_4:-52720974 None:intergenic
TTGTATACTGGAGCAGGTGG+TGG 0.530491 4_4:-52721355 None:intergenic
ATCACCCAAAGTTTGGAAAG+TGG 0.535768 4_4:+52721854 Msa0687740:CDS
AAGAACCTCACATGGTTCAA+AGG 0.536553 4_4:-52719736 None:intergenic
GGCTTTGGAATTACTACTGG+AGG 0.536776 4_4:-52721586 None:intergenic
TGGAGGTTTGTATACTGGAA+CGG 0.538317 4_4:-52721467 None:intergenic
GGTTTGTAAATTGGAACAAC+CGG 0.540910 4_4:-52721610 None:intergenic
AAAGCAGATCAATCAATACT+TGG 0.540981 4_4:-52719888 None:intergenic
ACTGGATGTTCAACCTTTGG+TGG 0.542345 4_4:-52721331 None:intergenic
TTCTCATAAACAGGTGTAGG+AGG 0.543447 4_4:-52721136 None:intergenic
ACTGGGTGCTCAATCTTTGG+TGG 0.543549 4_4:-52721538 None:intergenic
TCCAAAGCCACAACCACCAC+CGG 0.544433 4_4:+52721390 Msa0687740:CDS
ACAGGCGTAGGTGGAGGAAG+AGG 0.545913 4_4:-52721259 None:intergenic
GGCTTATATATTGGAACAGG+TGG 0.547652 4_4:-52721565 None:intergenic
GGTTTCTCATAAACAGGTGT+AGG 0.548606 4_4:-52721139 None:intergenic
ATAGGCACAGGTGGAGGGCA+AGG 0.548824 4_4:-52721094 None:intergenic
GGAGGCCATGATCCAAACTT+GGG 0.549567 4_4:-52721910 None:intergenic
AAAATCTTTGGTGGAAATGG+TGG 0.550630 4_4:-52720965 None:intergenic
ACAGGTGTAGGTGGAGGGAG+AGG 0.551926 4_4:-52721226 None:intergenic
TGATATACAGGCGTAGGTGG+AGG 0.552048 4_4:-52721265 None:intergenic
GTAGATGGGAATATGAGGAA+AGG 0.552981 4_4:-52721065 None:intergenic
TCATACACAGGTGTAGGTGG+AGG 0.556428 4_4:-52721232 None:intergenic
TGGTAAACAGGCACAGGCGG+AGG 0.557803 4_4:-52721199 None:intergenic
AAGCTCTTATGAGGGATTGG+TGG 0.558802 4_4:-52721826 None:intergenic
ATGGGAATATGAGGAAAGGG+AGG 0.558873 4_4:-52721061 None:intergenic
GGTTTATGGTAAACAGGCAC+AGG 0.560487 4_4:-52721205 None:intergenic
CATATATAGGCACAGGTGGA+GGG 0.562809 4_4:-52721099 None:intergenic
ACCCTAAGTACTGCTGCTGC+TGG 0.563864 4_4:+52720824 Msa0687740:CDS
GGTTTATGATATACAGGCGT+AGG 0.567260 4_4:-52721271 None:intergenic
GGAGGCAGAGTTGGAAGAGG+TGG 0.568083 4_4:-52721670 None:intergenic
GGATGCTCAACCTTTGGTGG+TGG 0.571275 4_4:-52721433 None:intergenic
TTCTCATAGACAGGTGTAGG+TGG 0.573276 4_4:-52721169 None:intergenic
AAGCTCTTTGGAGGCAATGG+AGG 0.573741 4_4:-52721772 None:intergenic
TTCTCATACACAGGTGTAGG+TGG 0.574160 4_4:-52721235 None:intergenic
ACTGGATGCTCAACCTTTGG+TGG 0.575483 4_4:-52721436 None:intergenic
GGTTTCTCATAGACAGGTGT+AGG 0.575587 4_4:-52721172 None:intergenic
TCATAGACAGGTGTAGGTGG+AGG 0.577698 4_4:-52721166 None:intergenic
AATTGAGGTAAATCAGGATG+AGG 0.587264 4_4:-52720926 None:intergenic
TTTGGAGGCAGAGTTGGAAG+AGG 0.589114 4_4:-52721673 None:intergenic
GGAAGTGCCTTTGGAACCGG+TGG 0.589459 4_4:-52721487 None:intergenic
TTATGATATACAGGCGTAGG+TGG 0.589531 4_4:-52721268 None:intergenic
TCCAGTATACAAACCTCCAC+CGG 0.590695 4_4:+52721471 Msa0687740:CDS
GGTTTCTCATACACAGGTGT+AGG 0.592215 4_4:-52721238 None:intergenic
GGATGTTCAACCTTTGGTGG+TGG 0.593017 4_4:-52721328 None:intergenic
CATAAACAGGTGTAGGAGGA+GGG 0.593725 4_4:-52721132 None:intergenic
CAAACCTCCACCGGTTCCAA+AGG 0.595650 4_4:+52721480 Msa0687740:CDS
GAAACCATGTCCACCACCAA+AGG 0.604111 4_4:+52721318 Msa0687740:CDS
GAAACCATGTCCACCACCAA+AGG 0.604111 4_4:+52721423 Msa0687740:CDS
GAGAGGCCAAAAGAATTTGG+AGG 0.605203 4_4:-52720876 None:intergenic
GGTTTCTTGATCGGGACTGG+TGG 0.605416 4_4:-52721511 None:intergenic
TTGGAACAGGTGGTAGAACT+GGG 0.608093 4_4:-52721555 None:intergenic
AGAGTTGGAAGAGGTGGACA+TGG 0.609427 4_4:-52721664 None:intergenic
GGTTTCTTGACCGGAACCGG+TGG 0.610970 4_4:-52721406 None:intergenic
AGTAGTAATTCCAAAGCCAC+CGG 0.613019 4_4:+52721591 Msa0687740:CDS
AAAAGAGGATGTTTGAAGAG+AGG 0.615228 4_4:-52720893 None:intergenic
ATAGGAATATGAGGAAATGG+AGG 0.616115 4_4:-52721031 None:intergenic
GTCCACCTTTGAACCATGTG+AGG 0.621477 4_4:+52719731 Msa0687740:five_prime_UTR
CATACACAGGTGTAGGTGGA+GGG 0.625803 4_4:-52721231 None:intergenic
TTCTTGTAGATAGGAACAGG+AGG 0.631040 4_4:-52721007 None:intergenic
AGGCCATCATGAGCAGGACA+AGG 0.637081 4_4:-52720755 None:intergenic
TTGTAAATTGGAACAACCGG+TGG 0.639441 4_4:-52721607 None:intergenic
GTTGGAAGAGGTGGACATGG+TGG 0.641805 4_4:-52721661 None:intergenic
GGTTGTGGCTTTGGAACCGG+AGG 0.643174 4_4:-52721382 None:intergenic
AACCTCACATGGTTCAAAGG+TGG 0.643285 4_4:-52719733 None:intergenic
GGTTTGTATACTGGAGCAGG+TGG 0.652100 4_4:-52721358 None:intergenic
TTATGGTAAACAGGCACAGG+CGG 0.653317 4_4:-52721202 None:intergenic
TGGAGACCATAGTACAGTTG+AGG 0.656125 4_4:+52720004 Msa0687740:CDS
GGTTTCTTGACTGGAACAGG+AGG 0.656712 4_4:-52721301 None:intergenic
CATGGTGGTTTCTTGAATGG+AGG 0.661048 4_4:-52721646 None:intergenic
GATGGAAGAAGCTCTTATGA+GGG 0.661558 4_4:-52721834 None:intergenic
AATGGAGGAAGAACAACTGG+TGG 0.671156 4_4:-52721631 None:intergenic
GAGGCCATGATCCAAACTTG+GGG 0.674792 4_4:-52721909 None:intergenic
TGAAATTTAAGAACCTCACA+TGG 0.680500 4_4:-52719744 None:intergenic
TAATTATGAGGACTTAGTGG+AGG 0.686242 4_4:-52721928 None:intergenic
GAGTATACTACTAATTTGAG+AGG 0.686667 4_4:-52719815 None:intergenic
GGTTTGTATACTGGAACGGG+TGG 0.692269 4_4:-52721463 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATCAAAAAAAATGTTT+TGG + chr4_4:52720138-52720157 Msa0687740:intron 10.0%
!!! TTTTATCAAAAAAAATGTTT+TGG + chr4_4:52720138-52720157 Msa0687740:intron 10.0%
!!! ATTTTGTTAATAGTATAGCT+GGG + chr4_4:52719683-52719702 Msa0687740:five_prime_UTR 20.0%
!! GTCTAATATATAAACAATGT+TGG - chr4_4:52719796-52719815 None:intergenic 20.0%
!! ATCAAGTATCTCTAAATATT+AGG + chr4_4:52720270-52720289 Msa0687740:intron 20.0%
!!! TTGTTTATATTTTGTTAGAG+AGG - chr4_4:52720439-52720458 None:intergenic 20.0%
!! TCTCTTTGTAACAAAATATA+AGG - chr4_4:52720513-52720532 None:intergenic 20.0%
!!! ATTTTGTTAATAGTATAGCT+GGG + chr4_4:52719683-52719702 Msa0687740:five_prime_UTR 20.0%
!! GTCTAATATATAAACAATGT+TGG - chr4_4:52719796-52719815 None:intergenic 20.0%
!! ATCAAGTATCTCTAAATATT+AGG + chr4_4:52720270-52720289 Msa0687740:intron 20.0%
!!! TTGTTTATATTTTGTTAGAG+AGG - chr4_4:52720439-52720458 None:intergenic 20.0%
!! TCTCTTTGTAACAAAATATA+AGG - chr4_4:52720513-52720532 None:intergenic 20.0%
!! GATTTTGTTAATAGTATAGC+TGG + chr4_4:52719682-52719701 Msa0687740:five_prime_UTR 25.0%
!! TTTTGTTAATAGTATAGCTG+GGG + chr4_4:52719684-52719703 Msa0687740:five_prime_UTR 25.0%
! AGGTTCTTAAATTTCATTGT+CGG + chr4_4:52719751-52719770 Msa0687740:five_prime_UTR 25.0%
! TTTCTTTGGTTAAAAAGAAG+AGG - chr4_4:52720186-52720205 None:intergenic 25.0%
! CTTGATAAAAGTGATATAGT+AGG - chr4_4:52720256-52720275 None:intergenic 25.0%
! AACTATGAGTATCAAATTCA+TGG - chr4_4:52720390-52720409 None:intergenic 25.0%
!!! TTGTGCATAATTTTTTTGCA+GGG + chr4_4:52720564-52720583 Msa0687740:intron 25.0%
!!! AATGGACATTTTAAAACAAG+AGG + chr4_4:52720617-52720636 Msa0687740:CDS 25.0%
!!! ATGGACATTTTAAAACAAGA+GGG + chr4_4:52720618-52720637 Msa0687740:CDS 25.0%
!! TTTTACAATTTCTTGAGGAA+GGG - chr4_4:52720681-52720700 None:intergenic 25.0%
!!! TTTTGACTTGATGACAATTT+TGG - chr4_4:52720789-52720808 None:intergenic 25.0%
!! GATTTTGTTAATAGTATAGC+TGG + chr4_4:52719682-52719701 Msa0687740:five_prime_UTR 25.0%
!! TTTTGTTAATAGTATAGCTG+GGG + chr4_4:52719684-52719703 Msa0687740:five_prime_UTR 25.0%
! AGGTTCTTAAATTTCATTGT+CGG + chr4_4:52719751-52719770 Msa0687740:five_prime_UTR 25.0%
! TTTCTTTGGTTAAAAAGAAG+AGG - chr4_4:52720186-52720205 None:intergenic 25.0%
! CTTGATAAAAGTGATATAGT+AGG - chr4_4:52720256-52720275 None:intergenic 25.0%
! AACTATGAGTATCAAATTCA+TGG - chr4_4:52720390-52720409 None:intergenic 25.0%
!!! TTGTGCATAATTTTTTTGCA+GGG + chr4_4:52720564-52720583 Msa0687740:intron 25.0%
!!! AATGGACATTTTAAAACAAG+AGG + chr4_4:52720617-52720636 Msa0687740:CDS 25.0%
!!! ATGGACATTTTAAAACAAGA+GGG + chr4_4:52720618-52720637 Msa0687740:CDS 25.0%
!! TTTTACAATTTCTTGAGGAA+GGG - chr4_4:52720681-52720700 None:intergenic 25.0%
!!! TTTTGACTTGATGACAATTT+TGG - chr4_4:52720789-52720808 None:intergenic 25.0%
TGAAATTTAAGAACCTCACA+TGG - chr4_4:52719747-52719766 None:intergenic 30.0%
! CTTAAATTTCATTGTCGGTT+TGG + chr4_4:52719756-52719775 Msa0687740:five_prime_UTR 30.0%
GAGTATACTACTAATTTGAG+AGG - chr4_4:52719818-52719837 None:intergenic 30.0%
AAAGCAGATCAATCAATACT+TGG - chr4_4:52719891-52719910 None:intergenic 30.0%
!! AGTATTGATTGATCTGCTTT+AGG + chr4_4:52719891-52719910 Msa0687740:five_prime_UTR 30.0%
!! TTTGTTGTCTTTTTGGTACT+AGG + chr4_4:52719969-52719988 Msa0687740:CDS 30.0%
GACTTATGGAAGAATTTCTT+TGG - chr4_4:52720200-52720219 None:intergenic 30.0%
TATTAGGTGAAGACATAAAG+TGG + chr4_4:52720286-52720305 Msa0687740:intron 30.0%
!! AGTAACTTGTTTGAAAAGTG+TGG + chr4_4:52720328-52720347 Msa0687740:intron 30.0%
GGATCTAGTTATTATAGCAT+AGG - chr4_4:52720369-52720388 None:intergenic 30.0%
! ACAAAAGAAGTACATGTATG+TGG + chr4_4:52720455-52720474 Msa0687740:intron 30.0%
!!! CTTGTGCATAATTTTTTTGC+AGG + chr4_4:52720563-52720582 Msa0687740:intron 30.0%
!!! TGGACATTTTAAAACAAGAG+GGG + chr4_4:52720619-52720638 Msa0687740:CDS 30.0%
! CTTTTACAATTTCTTGAGGA+AGG - chr4_4:52720682-52720701 None:intergenic 30.0%
! CCTTCTTTTACAATTTCTTG+AGG - chr4_4:52720686-52720705 None:intergenic 30.0%
CCTCAAGAAATTGTAAAAGA+AGG + chr4_4:52720683-52720702 Msa0687740:CDS 30.0%
! AAATGGTGGAAAAACTTTAG+GGG - chr4_4:52720954-52720973 None:intergenic 30.0%
! GAAATGGTGGAAAAACTTTA+GGG - chr4_4:52720955-52720974 None:intergenic 30.0%
TGTTTATGGAAAATCTTTGG+TGG - chr4_4:52720977-52720996 None:intergenic 30.0%
TAGATAGGAATATGAGGAAA+TGG - chr4_4:52721037-52721056 None:intergenic 30.0%
! GGGATAGGTTTTTCATATAT+AGG - chr4_4:52721115-52721134 None:intergenic 30.0%
!!! TTTTTTCATCACCCTAAGTA+TGG + chr4_4:52721742-52721761 Msa0687740:CDS 30.0%
! AAGAGGCTTTTTGGATTAAT+TGG - chr4_4:52721883-52721902 None:intergenic 30.0%
TGAAATTTAAGAACCTCACA+TGG - chr4_4:52719747-52719766 None:intergenic 30.0%
! CTTAAATTTCATTGTCGGTT+TGG + chr4_4:52719756-52719775 Msa0687740:five_prime_UTR 30.0%
GAGTATACTACTAATTTGAG+AGG - chr4_4:52719818-52719837 None:intergenic 30.0%
AAAGCAGATCAATCAATACT+TGG - chr4_4:52719891-52719910 None:intergenic 30.0%
!! AGTATTGATTGATCTGCTTT+AGG + chr4_4:52719891-52719910 Msa0687740:five_prime_UTR 30.0%
!! TTTGTTGTCTTTTTGGTACT+AGG + chr4_4:52719969-52719988 Msa0687740:CDS 30.0%
GACTTATGGAAGAATTTCTT+TGG - chr4_4:52720200-52720219 None:intergenic 30.0%
TATTAGGTGAAGACATAAAG+TGG + chr4_4:52720286-52720305 Msa0687740:intron 30.0%
!! AGTAACTTGTTTGAAAAGTG+TGG + chr4_4:52720328-52720347 Msa0687740:intron 30.0%
GGATCTAGTTATTATAGCAT+AGG - chr4_4:52720369-52720388 None:intergenic 30.0%
! ACAAAAGAAGTACATGTATG+TGG + chr4_4:52720455-52720474 Msa0687740:intron 30.0%
!!! CTTGTGCATAATTTTTTTGC+AGG + chr4_4:52720563-52720582 Msa0687740:intron 30.0%
!!! TGGACATTTTAAAACAAGAG+GGG + chr4_4:52720619-52720638 Msa0687740:CDS 30.0%
! CTTTTACAATTTCTTGAGGA+AGG - chr4_4:52720682-52720701 None:intergenic 30.0%
! CCTTCTTTTACAATTTCTTG+AGG - chr4_4:52720686-52720705 None:intergenic 30.0%
CCTCAAGAAATTGTAAAAGA+AGG + chr4_4:52720683-52720702 Msa0687740:CDS 30.0%
! AAATGGTGGAAAAACTTTAG+GGG - chr4_4:52720954-52720973 None:intergenic 30.0%
! GAAATGGTGGAAAAACTTTA+GGG - chr4_4:52720955-52720974 None:intergenic 30.0%
TGTTTATGGAAAATCTTTGG+TGG - chr4_4:52720977-52720996 None:intergenic 30.0%
TAGATAGGAATATGAGGAAA+TGG - chr4_4:52721037-52721056 None:intergenic 30.0%
! GGGATAGGTTTTTCATATAT+AGG - chr4_4:52721115-52721134 None:intergenic 30.0%
!!! TTTTTTCATCACCCTAAGTA+TGG + chr4_4:52721742-52721761 Msa0687740:CDS 30.0%
! AAGAGGCTTTTTGGATTAAT+TGG - chr4_4:52721883-52721902 None:intergenic 30.0%
!! ATTTCATTGTCGGTTTGGTT+TGG + chr4_4:52719761-52719780 Msa0687740:five_prime_UTR 35.0%
!!! TTGGCTGTTTGTTGTCTTTT+TGG + chr4_4:52719962-52719981 Msa0687740:CDS 35.0%
! TTGGTACTAGGTTTTTGCTA+TGG + chr4_4:52719981-52720000 Msa0687740:CDS 35.0%
ATAGTACAGTTGAGGTAGTT+GGG + chr4_4:52720012-52720031 Msa0687740:CDS 35.0%
! GAACAATATTAAGACTAGCC+AGG + chr4_4:52720061-52720080 Msa0687740:CDS 35.0%
! TCCATAAGTCATTTGAAGTG+TGG + chr4_4:52720210-52720229 Msa0687740:intron 35.0%
TCCACACTTCAAATGACTTA+TGG - chr4_4:52720214-52720233 None:intergenic 35.0%
! TGGACAGATGATAATGCATA+GGG + chr4_4:52720230-52720249 Msa0687740:intron 35.0%
ATTGACTGCAAAGAAGCAAA+TGG + chr4_4:52720599-52720618 Msa0687740:CDS 35.0%
!!! TGACAATTTTGGTGTTTTGC+AGG - chr4_4:52720778-52720797 None:intergenic 35.0%
! CATGTACCTCCAAATTCTTT+TGG + chr4_4:52720870-52720889 Msa0687740:CDS 35.0%
AAAAGAGGATGTTTGAAGAG+AGG - chr4_4:52720896-52720915 None:intergenic 35.0%
AATTGAGGTAAATCAGGATG+AGG - chr4_4:52720929-52720948 None:intergenic 35.0%
! AATGGTGGAAAAACTTTAGG+GGG - chr4_4:52720953-52720972 None:intergenic 35.0%
! GGAAATGGTGGAAAAACTTT+AGG - chr4_4:52720956-52720975 None:intergenic 35.0%
AAAATCTTTGGTGGAAATGG+TGG - chr4_4:52720968-52720987 None:intergenic 35.0%
TGGAAAATCTTTGGTGGAAA+TGG - chr4_4:52720971-52720990 None:intergenic 35.0%
GGGTGTTTATGGAAAATCTT+TGG - chr4_4:52720980-52720999 None:intergenic 35.0%
AATGGAGGTTTCTTGTAGAT+AGG - chr4_4:52721019-52721038 None:intergenic 35.0%
ATAGGAATATGAGGAAATGG+AGG - chr4_4:52721034-52721053 None:intergenic 35.0%
GGTTTGTAGATAGGAATATG+AGG - chr4_4:52721043-52721062 None:intergenic 35.0%
TAGATGGGAATATGAGGAAA+GGG - chr4_4:52721067-52721086 None:intergenic 35.0%
TTCTTGTAGATGGGAATATG+AGG - chr4_4:52721073-52721092 None:intergenic 35.0%
! TTTTCATATATAGGCACAGG+TGG - chr4_4:52721106-52721125 None:intergenic 35.0%
! GGTTTTTCATATATAGGCAC+AGG - chr4_4:52721109-52721128 None:intergenic 35.0%
GGAAGAGGTTTATGATATAC+AGG - chr4_4:52721280-52721299 None:intergenic 35.0%
ACTACTGGAGGCTTATATAT+TGG - chr4_4:52721577-52721596 None:intergenic 35.0%
GGTTTGTAAATTGGAACAAC+CGG - chr4_4:52721613-52721632 None:intergenic 35.0%
! ACAACTGGTGGTTTGTAAAT+TGG - chr4_4:52721622-52721641 None:intergenic 35.0%
TGATGAAAAAAGCTCTTTGG+AGG - chr4_4:52721733-52721752 None:intergenic 35.0%
ATCACCCTAAGTATGGAAAA+TGG + chr4_4:52721749-52721768 Msa0687740:CDS 35.0%
! ATTTTCCAAAATACTTGGGG+TGG - chr4_4:52721804-52721823 None:intergenic 35.0%
!! ACCCCAAGTATTTTGGAAAA+TGG + chr4_4:52721803-52721822 Msa0687740:CDS 35.0%
!! GCCATTTTCCAAAATACTTG+GGG - chr4_4:52721807-52721826 None:intergenic 35.0%
!! GGCCATTTTCCAAAATACTT+GGG - chr4_4:52721808-52721827 None:intergenic 35.0%
!! TGGCCATTTTCCAAAATACT+TGG - chr4_4:52721809-52721828 None:intergenic 35.0%
! AGGCTTTTTGGATTAATTGG+TGG - chr4_4:52721880-52721899 None:intergenic 35.0%
TAATTATGAGGACTTAGTGG+AGG - chr4_4:52721931-52721950 None:intergenic 35.0%
!! ATTTCATTGTCGGTTTGGTT+TGG + chr4_4:52719761-52719780 Msa0687740:five_prime_UTR 35.0%
!!! TTGGCTGTTTGTTGTCTTTT+TGG + chr4_4:52719962-52719981 Msa0687740:CDS 35.0%
! TTGGTACTAGGTTTTTGCTA+TGG + chr4_4:52719981-52720000 Msa0687740:CDS 35.0%
ATAGTACAGTTGAGGTAGTT+GGG + chr4_4:52720012-52720031 Msa0687740:CDS 35.0%
! GAACAATATTAAGACTAGCC+AGG + chr4_4:52720061-52720080 Msa0687740:CDS 35.0%
! TCCATAAGTCATTTGAAGTG+TGG + chr4_4:52720210-52720229 Msa0687740:intron 35.0%
TCCACACTTCAAATGACTTA+TGG - chr4_4:52720214-52720233 None:intergenic 35.0%
! TGGACAGATGATAATGCATA+GGG + chr4_4:52720230-52720249 Msa0687740:intron 35.0%
ATTGACTGCAAAGAAGCAAA+TGG + chr4_4:52720599-52720618 Msa0687740:CDS 35.0%
!!! TGACAATTTTGGTGTTTTGC+AGG - chr4_4:52720778-52720797 None:intergenic 35.0%
! CATGTACCTCCAAATTCTTT+TGG + chr4_4:52720870-52720889 Msa0687740:CDS 35.0%
AAAAGAGGATGTTTGAAGAG+AGG - chr4_4:52720896-52720915 None:intergenic 35.0%
AATTGAGGTAAATCAGGATG+AGG - chr4_4:52720929-52720948 None:intergenic 35.0%
! AATGGTGGAAAAACTTTAGG+GGG - chr4_4:52720953-52720972 None:intergenic 35.0%
! GGAAATGGTGGAAAAACTTT+AGG - chr4_4:52720956-52720975 None:intergenic 35.0%
AAAATCTTTGGTGGAAATGG+TGG - chr4_4:52720968-52720987 None:intergenic 35.0%
TGGAAAATCTTTGGTGGAAA+TGG - chr4_4:52720971-52720990 None:intergenic 35.0%
GGGTGTTTATGGAAAATCTT+TGG - chr4_4:52720980-52720999 None:intergenic 35.0%
AATGGAGGTTTCTTGTAGAT+AGG - chr4_4:52721019-52721038 None:intergenic 35.0%
ATAGGAATATGAGGAAATGG+AGG - chr4_4:52721034-52721053 None:intergenic 35.0%
GGTTTGTAGATAGGAATATG+AGG - chr4_4:52721043-52721062 None:intergenic 35.0%
TAGATGGGAATATGAGGAAA+GGG - chr4_4:52721067-52721086 None:intergenic 35.0%
TTCTTGTAGATGGGAATATG+AGG - chr4_4:52721073-52721092 None:intergenic 35.0%
! TTTTCATATATAGGCACAGG+TGG - chr4_4:52721106-52721125 None:intergenic 35.0%
! GGTTTTTCATATATAGGCAC+AGG - chr4_4:52721109-52721128 None:intergenic 35.0%
GGAAGAGGTTTATGATATAC+AGG - chr4_4:52721280-52721299 None:intergenic 35.0%
ACTACTGGAGGCTTATATAT+TGG - chr4_4:52721577-52721596 None:intergenic 35.0%
GGTTTGTAAATTGGAACAAC+CGG - chr4_4:52721613-52721632 None:intergenic 35.0%
! ACAACTGGTGGTTTGTAAAT+TGG - chr4_4:52721622-52721641 None:intergenic 35.0%
TGATGAAAAAAGCTCTTTGG+AGG - chr4_4:52721733-52721752 None:intergenic 35.0%
ATCACCCTAAGTATGGAAAA+TGG + chr4_4:52721749-52721768 Msa0687740:CDS 35.0%
! ATTTTCCAAAATACTTGGGG+TGG - chr4_4:52721804-52721823 None:intergenic 35.0%
!! ACCCCAAGTATTTTGGAAAA+TGG + chr4_4:52721803-52721822 Msa0687740:CDS 35.0%
!! GCCATTTTCCAAAATACTTG+GGG - chr4_4:52721807-52721826 None:intergenic 35.0%
!! GGCCATTTTCCAAAATACTT+GGG - chr4_4:52721808-52721827 None:intergenic 35.0%
!! TGGCCATTTTCCAAAATACT+TGG - chr4_4:52721809-52721828 None:intergenic 35.0%
! AGGCTTTTTGGATTAATTGG+TGG - chr4_4:52721880-52721899 None:intergenic 35.0%
TAATTATGAGGACTTAGTGG+AGG - chr4_4:52721931-52721950 None:intergenic 35.0%
AAGAACCTCACATGGTTCAA+AGG - chr4_4:52719739-52719758 None:intergenic 40.0%
GAGAAGCTACTAAGCTTCTT+TGG - chr4_4:52719861-52719880 None:intergenic 40.0%
!! AAGAGCACAAAAGTGCTCTT+TGG - chr4_4:52719944-52719963 None:intergenic 40.0%
!!! AAAGAGCACTTTTGTGCTCT+TGG + chr4_4:52719943-52719962 Msa0687740:CDS 40.0%
!! GTACTAGGTTTTTGCTATGG+TGG + chr4_4:52719984-52720003 Msa0687740:CDS 40.0%
CAACTACCTCAACTGTACTA+TGG - chr4_4:52720013-52720032 None:intergenic 40.0%
CATAGTACAGTTGAGGTAGT+TGG + chr4_4:52720011-52720030 Msa0687740:CDS 40.0%
! GTGGACAGATGATAATGCAT+AGG + chr4_4:52720229-52720248 Msa0687740:intron 40.0%
!!! CATTTTAAAACAAGAGGGGC+AGG + chr4_4:52720623-52720642 Msa0687740:CDS 40.0%
GCAGGTGAGCTTGATAAAAA+AGG + chr4_4:52720641-52720660 Msa0687740:CDS 40.0%
GAAGAGAGGCCAAAAGAATT+TGG - chr4_4:52720882-52720901 None:intergenic 40.0%
TGAGGATGCTTAGGAAAAAG+AGG - chr4_4:52720911-52720930 None:intergenic 40.0%
AAATCAGGATGAGGATGCTT+AGG - chr4_4:52720920-52720939 None:intergenic 40.0%
! AAAACTTTAGGGGGGAATTG+AGG - chr4_4:52720944-52720963 None:intergenic 40.0%
! ATGGTGGAAAAACTTTAGGG+GGG - chr4_4:52720952-52720971 None:intergenic 40.0%
!! GAGGAAAAAGAGGGTGTTTA+TGG - chr4_4:52720991-52721010 None:intergenic 40.0%
TAGGAACAGGAGGAAAAAGA+GGG - chr4_4:52721000-52721019 None:intergenic 40.0%
ATAGGAACAGGAGGAAAAAG+AGG - chr4_4:52721001-52721020 None:intergenic 40.0%
TTCTTGTAGATAGGAACAGG+AGG - chr4_4:52721010-52721029 None:intergenic 40.0%
GGTTTCTTGTAGATAGGAAC+AGG - chr4_4:52721013-52721032 None:intergenic 40.0%
GTAGATGGGAATATGAGGAA+AGG - chr4_4:52721068-52721087 None:intergenic 40.0%
TTCTCATAAACAGGTGTAGG+AGG - chr4_4:52721139-52721158 None:intergenic 40.0%
GGTTTCTCATAAACAGGTGT+AGG - chr4_4:52721142-52721161 None:intergenic 40.0%
GGAAGAGGTTTCTCATAAAC+AGG - chr4_4:52721148-52721167 None:intergenic 40.0%
TTATGATATACAGGCGTAGG+TGG - chr4_4:52721271-52721290 None:intergenic 40.0%
GGTTTATGATATACAGGCGT+AGG - chr4_4:52721274-52721293 None:intergenic 40.0%
AAAACTGGATGCTCAACCTT+TGG - chr4_4:52721442-52721461 None:intergenic 40.0%
TGGAGGTTTGTATACTGGAA+CGG - chr4_4:52721470-52721489 None:intergenic 40.0%
GGCTTATATATTGGAACAGG+TGG - chr4_4:52721568-52721587 None:intergenic 40.0%
GGAGGCTTATATATTGGAAC+AGG - chr4_4:52721571-52721590 None:intergenic 40.0%
AGTAGTAATTCCAAAGCCAC+CGG + chr4_4:52721591-52721610 Msa0687740:CDS 40.0%
TTGTAAATTGGAACAACCGG+TGG - chr4_4:52721610-52721629 None:intergenic 40.0%
TTGAATGGAGGAAGAACAAC+TGG - chr4_4:52721637-52721656 None:intergenic 40.0%
TGATGGAAAAAGCTCTTTGG+AGG - chr4_4:52721691-52721710 None:intergenic 40.0%
! TTTTTCCATCACCCCAAGTT+TGG + chr4_4:52721700-52721719 Msa0687740:CDS 40.0%
! ATTTTCCAAACTTGGGGTGA+TGG - chr4_4:52721708-52721727 None:intergenic 40.0%
! GAGGCAATTTTCCAAACTTG+GGG - chr4_4:52721714-52721733 None:intergenic 40.0%
! GGAGGCAATTTTCCAAACTT+GGG - chr4_4:52721715-52721734 None:intergenic 40.0%
! TGGAGGCAATTTTCCAAACT+TGG - chr4_4:52721716-52721735 None:intergenic 40.0%
GGGTGATGAAAAAAGCTCTT+TGG - chr4_4:52721736-52721755 None:intergenic 40.0%
!! GAGGCCATTTTCCATACTTA+GGG - chr4_4:52721756-52721775 None:intergenic 40.0%
AAGAAGCTCTTATGAGGGAT+TGG - chr4_4:52721832-52721851 None:intergenic 40.0%
GATGGAAGAAGCTCTTATGA+GGG - chr4_4:52721837-52721856 None:intergenic 40.0%
TGATGGAAGAAGCTCTTATG+AGG - chr4_4:52721838-52721857 None:intergenic 40.0%
TTCTTCCATCACCCAAAGTT+TGG + chr4_4:52721847-52721866 Msa0687740:CDS 40.0%
ACTTTCCAAACTTTGGGTGA+TGG - chr4_4:52721855-52721874 None:intergenic 40.0%
ATCACCCAAAGTTTGGAAAG+TGG + chr4_4:52721854-52721873 Msa0687740:CDS 40.0%
AAGAACCTCACATGGTTCAA+AGG - chr4_4:52719739-52719758 None:intergenic 40.0%
GAGAAGCTACTAAGCTTCTT+TGG - chr4_4:52719861-52719880 None:intergenic 40.0%
!! AAGAGCACAAAAGTGCTCTT+TGG - chr4_4:52719944-52719963 None:intergenic 40.0%
!!! AAAGAGCACTTTTGTGCTCT+TGG + chr4_4:52719943-52719962 Msa0687740:CDS 40.0%
!! GTACTAGGTTTTTGCTATGG+TGG + chr4_4:52719984-52720003 Msa0687740:CDS 40.0%
CAACTACCTCAACTGTACTA+TGG - chr4_4:52720013-52720032 None:intergenic 40.0%
CATAGTACAGTTGAGGTAGT+TGG + chr4_4:52720011-52720030 Msa0687740:CDS 40.0%
! GTGGACAGATGATAATGCAT+AGG + chr4_4:52720229-52720248 Msa0687740:intron 40.0%
!!! CATTTTAAAACAAGAGGGGC+AGG + chr4_4:52720623-52720642 Msa0687740:CDS 40.0%
GCAGGTGAGCTTGATAAAAA+AGG + chr4_4:52720641-52720660 Msa0687740:CDS 40.0%
GAAGAGAGGCCAAAAGAATT+TGG - chr4_4:52720882-52720901 None:intergenic 40.0%
TGAGGATGCTTAGGAAAAAG+AGG - chr4_4:52720911-52720930 None:intergenic 40.0%
AAATCAGGATGAGGATGCTT+AGG - chr4_4:52720920-52720939 None:intergenic 40.0%
! AAAACTTTAGGGGGGAATTG+AGG - chr4_4:52720944-52720963 None:intergenic 40.0%
! ATGGTGGAAAAACTTTAGGG+GGG - chr4_4:52720952-52720971 None:intergenic 40.0%
!! GAGGAAAAAGAGGGTGTTTA+TGG - chr4_4:52720991-52721010 None:intergenic 40.0%
TAGGAACAGGAGGAAAAAGA+GGG - chr4_4:52721000-52721019 None:intergenic 40.0%
ATAGGAACAGGAGGAAAAAG+AGG - chr4_4:52721001-52721020 None:intergenic 40.0%
TTCTTGTAGATAGGAACAGG+AGG - chr4_4:52721010-52721029 None:intergenic 40.0%
GGTTTCTTGTAGATAGGAAC+AGG - chr4_4:52721013-52721032 None:intergenic 40.0%
GTAGATGGGAATATGAGGAA+AGG - chr4_4:52721068-52721087 None:intergenic 40.0%
TTCTCATAAACAGGTGTAGG+AGG - chr4_4:52721139-52721158 None:intergenic 40.0%
GGTTTCTCATAAACAGGTGT+AGG - chr4_4:52721142-52721161 None:intergenic 40.0%
GGAAGAGGTTTCTCATAAAC+AGG - chr4_4:52721148-52721167 None:intergenic 40.0%
TTATGATATACAGGCGTAGG+TGG - chr4_4:52721271-52721290 None:intergenic 40.0%
GGTTTATGATATACAGGCGT+AGG - chr4_4:52721274-52721293 None:intergenic 40.0%
AAAACTGGATGCTCAACCTT+TGG - chr4_4:52721442-52721461 None:intergenic 40.0%
TGGAGGTTTGTATACTGGAA+CGG - chr4_4:52721470-52721489 None:intergenic 40.0%
GGCTTATATATTGGAACAGG+TGG - chr4_4:52721568-52721587 None:intergenic 40.0%
GGAGGCTTATATATTGGAAC+AGG - chr4_4:52721571-52721590 None:intergenic 40.0%
AGTAGTAATTCCAAAGCCAC+CGG + chr4_4:52721591-52721610 Msa0687740:CDS 40.0%
TTGTAAATTGGAACAACCGG+TGG - chr4_4:52721610-52721629 None:intergenic 40.0%
TTGAATGGAGGAAGAACAAC+TGG - chr4_4:52721637-52721656 None:intergenic 40.0%
TGATGGAAAAAGCTCTTTGG+AGG - chr4_4:52721691-52721710 None:intergenic 40.0%
! TTTTTCCATCACCCCAAGTT+TGG + chr4_4:52721700-52721719 Msa0687740:CDS 40.0%
! ATTTTCCAAACTTGGGGTGA+TGG - chr4_4:52721708-52721727 None:intergenic 40.0%
! GAGGCAATTTTCCAAACTTG+GGG - chr4_4:52721714-52721733 None:intergenic 40.0%
! GGAGGCAATTTTCCAAACTT+GGG - chr4_4:52721715-52721734 None:intergenic 40.0%
! TGGAGGCAATTTTCCAAACT+TGG - chr4_4:52721716-52721735 None:intergenic 40.0%
GGGTGATGAAAAAAGCTCTT+TGG - chr4_4:52721736-52721755 None:intergenic 40.0%
!! GAGGCCATTTTCCATACTTA+GGG - chr4_4:52721756-52721775 None:intergenic 40.0%
AAGAAGCTCTTATGAGGGAT+TGG - chr4_4:52721832-52721851 None:intergenic 40.0%
GATGGAAGAAGCTCTTATGA+GGG - chr4_4:52721837-52721856 None:intergenic 40.0%
TGATGGAAGAAGCTCTTATG+AGG - chr4_4:52721838-52721857 None:intergenic 40.0%
TTCTTCCATCACCCAAAGTT+TGG + chr4_4:52721847-52721866 Msa0687740:CDS 40.0%
ACTTTCCAAACTTTGGGTGA+TGG - chr4_4:52721855-52721874 None:intergenic 40.0%
ATCACCCAAAGTTTGGAAAG+TGG + chr4_4:52721854-52721873 Msa0687740:CDS 40.0%
AACCTCACATGGTTCAAAGG+TGG - chr4_4:52719736-52719755 None:intergenic 45.0%
TGGAGACCATAGTACAGTTG+AGG + chr4_4:52720004-52720023 Msa0687740:CDS 45.0%
! ACAAAGTACCTGAGAAAGCC+TGG - chr4_4:52720082-52720101 None:intergenic 45.0%
GAGAGGCCAAAAGAATTTGG+AGG - chr4_4:52720879-52720898 None:intergenic 45.0%
GGAAAGGGAGGTTTGTAGAT+AGG - chr4_4:52721052-52721071 None:intergenic 45.0%
ATGGGAATATGAGGAAAGGG+AGG - chr4_4:52721064-52721083 None:intergenic 45.0%
GGGCAAGGTTTCTTGTAGAT+GGG - chr4_4:52721082-52721101 None:intergenic 45.0%
AGGGCAAGGTTTCTTGTAGA+TGG - chr4_4:52721083-52721102 None:intergenic 45.0%
CATATATAGGCACAGGTGGA+GGG - chr4_4:52721102-52721121 None:intergenic 45.0%
TCATATATAGGCACAGGTGG+AGG - chr4_4:52721103-52721122 None:intergenic 45.0%
CATAAACAGGTGTAGGAGGA+GGG - chr4_4:52721135-52721154 None:intergenic 45.0%
TCATAAACAGGTGTAGGAGG+AGG - chr4_4:52721136-52721155 None:intergenic 45.0%
TTCTCATAGACAGGTGTAGG+TGG - chr4_4:52721172-52721191 None:intergenic 45.0%
GGTTTCTCATAGACAGGTGT+AGG - chr4_4:52721175-52721194 None:intergenic 45.0%
GGAAGAGGTTTCTCATAGAC+AGG - chr4_4:52721181-52721200 None:intergenic 45.0%
TTATGGTAAACAGGCACAGG+CGG - chr4_4:52721205-52721224 None:intergenic 45.0%
GGTTTATGGTAAACAGGCAC+AGG - chr4_4:52721208-52721227 None:intergenic 45.0%
GGGAGAGGTTTATGGTAAAC+AGG - chr4_4:52721214-52721233 None:intergenic 45.0%
TTCTCATACACAGGTGTAGG+TGG - chr4_4:52721238-52721257 None:intergenic 45.0%
GGTTTCTCATACACAGGTGT+AGG - chr4_4:52721241-52721260 None:intergenic 45.0%
GGAAGAGGTTTCTCATACAC+AGG - chr4_4:52721247-52721266 None:intergenic 45.0%
CATGGTTTCTTGACTGGAAC+AGG - chr4_4:52721307-52721326 None:intergenic 45.0%
ACTGGATGTTCAACCTTTGG+TGG - chr4_4:52721334-52721353 None:intergenic 45.0%
GGAACTGGATGTTCAACCTT+TGG - chr4_4:52721337-52721356 None:intergenic 45.0%
TCCAGTATACAAACCTCCTC+CGG + chr4_4:52721366-52721385 Msa0687740:CDS 45.0%
GGAGGTTTGTATACTGGAAC+GGG - chr4_4:52721469-52721488 None:intergenic 45.0%
TCCAGTATACAAACCTCCAC+CGG + chr4_4:52721471-52721490 Msa0687740:CDS 45.0%
GTGGACATGGTTTCTTGATC+GGG - chr4_4:52721522-52721541 None:intergenic 45.0%
GGTGGACATGGTTTCTTGAT+CGG - chr4_4:52721523-52721542 None:intergenic 45.0%
! TGCTCAATCTTTGGTGGACA+TGG - chr4_4:52721535-52721554 None:intergenic 45.0%
AGAACTGGGTGCTCAATCTT+TGG - chr4_4:52721544-52721563 None:intergenic 45.0%
TTGGAACAGGTGGTAGAACT+GGG - chr4_4:52721558-52721577 None:intergenic 45.0%
ATTGGAACAGGTGGTAGAAC+TGG - chr4_4:52721559-52721578 None:intergenic 45.0%
!! GGCTTTGGAATTACTACTGG+AGG - chr4_4:52721589-52721608 None:intergenic 45.0%
!! GGTGGCTTTGGAATTACTAC+TGG - chr4_4:52721592-52721611 None:intergenic 45.0%
AATGGAGGAAGAACAACTGG+TGG - chr4_4:52721634-52721653 None:intergenic 45.0%
CATGGTGGTTTCTTGAATGG+AGG - chr4_4:52721649-52721668 None:intergenic 45.0%
GGACATGGTGGTTTCTTGAA+TGG - chr4_4:52721652-52721671 None:intergenic 45.0%
!! GGGTGATGGAAAAAGCTCTT+TGG - chr4_4:52721694-52721713 None:intergenic 45.0%
!! GGAGGCCATTTTCCATACTT+AGG - chr4_4:52721757-52721776 None:intergenic 45.0%
! AAGAAGCTCTTTGGAGGCAA+TGG - chr4_4:52721778-52721797 None:intergenic 45.0%
! TTCCACCACCCCAAGTATTT+TGG + chr4_4:52721796-52721815 Msa0687740:CDS 45.0%
TTCCAAAATACTTGGGGTGG+TGG - chr4_4:52721801-52721820 None:intergenic 45.0%
AAGCTCTTATGAGGGATTGG+TGG - chr4_4:52721829-52721848 None:intergenic 45.0%
! GTGGCCACTTTCCAAACTTT+GGG - chr4_4:52721861-52721880 None:intergenic 45.0%
ATGATCCAAACTTGGGGTGA+TGG - chr4_4:52721906-52721925 None:intergenic 45.0%
ATCACCCCAAGTTTGGATCA+TGG + chr4_4:52721905-52721924 Msa0687740:CDS 45.0%
AACCTCACATGGTTCAAAGG+TGG - chr4_4:52719736-52719755 None:intergenic 45.0%
TGGAGACCATAGTACAGTTG+AGG + chr4_4:52720004-52720023 Msa0687740:CDS 45.0%
! ACAAAGTACCTGAGAAAGCC+TGG - chr4_4:52720082-52720101 None:intergenic 45.0%
GAGAGGCCAAAAGAATTTGG+AGG - chr4_4:52720879-52720898 None:intergenic 45.0%
GGAAAGGGAGGTTTGTAGAT+AGG - chr4_4:52721052-52721071 None:intergenic 45.0%
ATGGGAATATGAGGAAAGGG+AGG - chr4_4:52721064-52721083 None:intergenic 45.0%
GGGCAAGGTTTCTTGTAGAT+GGG - chr4_4:52721082-52721101 None:intergenic 45.0%
AGGGCAAGGTTTCTTGTAGA+TGG - chr4_4:52721083-52721102 None:intergenic 45.0%
CATATATAGGCACAGGTGGA+GGG - chr4_4:52721102-52721121 None:intergenic 45.0%
TCATATATAGGCACAGGTGG+AGG - chr4_4:52721103-52721122 None:intergenic 45.0%
CATAAACAGGTGTAGGAGGA+GGG - chr4_4:52721135-52721154 None:intergenic 45.0%
TCATAAACAGGTGTAGGAGG+AGG - chr4_4:52721136-52721155 None:intergenic 45.0%
TTCTCATAGACAGGTGTAGG+TGG - chr4_4:52721172-52721191 None:intergenic 45.0%
GGTTTCTCATAGACAGGTGT+AGG - chr4_4:52721175-52721194 None:intergenic 45.0%
GGAAGAGGTTTCTCATAGAC+AGG - chr4_4:52721181-52721200 None:intergenic 45.0%
TTATGGTAAACAGGCACAGG+CGG - chr4_4:52721205-52721224 None:intergenic 45.0%
GGTTTATGGTAAACAGGCAC+AGG - chr4_4:52721208-52721227 None:intergenic 45.0%
GGGAGAGGTTTATGGTAAAC+AGG - chr4_4:52721214-52721233 None:intergenic 45.0%
TTCTCATACACAGGTGTAGG+TGG - chr4_4:52721238-52721257 None:intergenic 45.0%
GGTTTCTCATACACAGGTGT+AGG - chr4_4:52721241-52721260 None:intergenic 45.0%
GGAAGAGGTTTCTCATACAC+AGG - chr4_4:52721247-52721266 None:intergenic 45.0%
CATGGTTTCTTGACTGGAAC+AGG - chr4_4:52721307-52721326 None:intergenic 45.0%
ACTGGATGTTCAACCTTTGG+TGG - chr4_4:52721334-52721353 None:intergenic 45.0%
GGAACTGGATGTTCAACCTT+TGG - chr4_4:52721337-52721356 None:intergenic 45.0%
TCCAGTATACAAACCTCCTC+CGG + chr4_4:52721366-52721385 Msa0687740:CDS 45.0%
GGAGGTTTGTATACTGGAAC+GGG - chr4_4:52721469-52721488 None:intergenic 45.0%
TCCAGTATACAAACCTCCAC+CGG + chr4_4:52721471-52721490 Msa0687740:CDS 45.0%
GTGGACATGGTTTCTTGATC+GGG - chr4_4:52721522-52721541 None:intergenic 45.0%
GGTGGACATGGTTTCTTGAT+CGG - chr4_4:52721523-52721542 None:intergenic 45.0%
! TGCTCAATCTTTGGTGGACA+TGG - chr4_4:52721535-52721554 None:intergenic 45.0%
AGAACTGGGTGCTCAATCTT+TGG - chr4_4:52721544-52721563 None:intergenic 45.0%
TTGGAACAGGTGGTAGAACT+GGG - chr4_4:52721558-52721577 None:intergenic 45.0%
ATTGGAACAGGTGGTAGAAC+TGG - chr4_4:52721559-52721578 None:intergenic 45.0%
!! GGCTTTGGAATTACTACTGG+AGG - chr4_4:52721589-52721608 None:intergenic 45.0%
!! GGTGGCTTTGGAATTACTAC+TGG - chr4_4:52721592-52721611 None:intergenic 45.0%
AATGGAGGAAGAACAACTGG+TGG - chr4_4:52721634-52721653 None:intergenic 45.0%
CATGGTGGTTTCTTGAATGG+AGG - chr4_4:52721649-52721668 None:intergenic 45.0%
GGACATGGTGGTTTCTTGAA+TGG - chr4_4:52721652-52721671 None:intergenic 45.0%
!! GGGTGATGGAAAAAGCTCTT+TGG - chr4_4:52721694-52721713 None:intergenic 45.0%
!! GGAGGCCATTTTCCATACTT+AGG - chr4_4:52721757-52721776 None:intergenic 45.0%
! AAGAAGCTCTTTGGAGGCAA+TGG - chr4_4:52721778-52721797 None:intergenic 45.0%
! TTCCACCACCCCAAGTATTT+TGG + chr4_4:52721796-52721815 Msa0687740:CDS 45.0%
TTCCAAAATACTTGGGGTGG+TGG - chr4_4:52721801-52721820 None:intergenic 45.0%
AAGCTCTTATGAGGGATTGG+TGG - chr4_4:52721829-52721848 None:intergenic 45.0%
! GTGGCCACTTTCCAAACTTT+GGG - chr4_4:52721861-52721880 None:intergenic 45.0%
ATGATCCAAACTTGGGGTGA+TGG - chr4_4:52721906-52721925 None:intergenic 45.0%
ATCACCCCAAGTTTGGATCA+TGG + chr4_4:52721905-52721924 Msa0687740:CDS 45.0%
GTCCACCTTTGAACCATGTG+AGG + chr4_4:52719731-52719750 Msa0687740:five_prime_UTR 50.0%
ACAGTTGAGGTAGTTGGGCT+TGG + chr4_4:52720017-52720036 Msa0687740:CDS 50.0%
! AAGACTAGCCAGGCTTTCTC+AGG + chr4_4:52720071-52720090 Msa0687740:CDS 50.0%
! TTTTGCAGGCCATCATGAGC+AGG - chr4_4:52720764-52720783 None:intergenic 50.0%
ACCAGCAGCAGCAGTACTTA+GGG - chr4_4:52720828-52720847 None:intergenic 50.0%
TACCAGCAGCAGCAGTACTT+AGG - chr4_4:52720829-52720848 None:intergenic 50.0%
GGGGGGAATTGAGGTAAATC+AGG - chr4_4:52720935-52720954 None:intergenic 50.0%
TCATAGACAGGTGTAGGTGG+AGG - chr4_4:52721169-52721188 None:intergenic 50.0%
TAGGTGGAGGGAGAGGTTTA+TGG - chr4_4:52721222-52721241 None:intergenic 50.0%
CATACACAGGTGTAGGTGGA+GGG - chr4_4:52721234-52721253 None:intergenic 50.0%
TCATACACAGGTGTAGGTGG+AGG - chr4_4:52721235-52721254 None:intergenic 50.0%
TGATATACAGGCGTAGGTGG+AGG - chr4_4:52721268-52721287 None:intergenic 50.0%
TTCTTGACTGGAACAGGAGG+AGG - chr4_4:52721301-52721320 None:intergenic 50.0%
GGTTTCTTGACTGGAACAGG+AGG - chr4_4:52721304-52721323 None:intergenic 50.0%
GGTGGACATGGTTTCTTGAC+TGG - chr4_4:52721313-52721332 None:intergenic 50.0%
GAAACCATGTCCACCACCAA+AGG + chr4_4:52721318-52721337 Msa0687740:CDS 50.0%
!! TCAACCTTTGGTGGTGGACA+TGG - chr4_4:52721325-52721344 None:intergenic 50.0%
GGATGTTCAACCTTTGGTGG+TGG - chr4_4:52721331-52721350 None:intergenic 50.0%
TTGTATACTGGAGCAGGTGG+TGG - chr4_4:52721358-52721377 None:intergenic 50.0%
GGTTTGTATACTGGAGCAGG+TGG - chr4_4:52721361-52721380 None:intergenic 50.0%
GGAGGTTTGTATACTGGAGC+AGG - chr4_4:52721364-52721383 None:intergenic 50.0%
ACCGGAGGAGGTTTGTATAC+TGG - chr4_4:52721370-52721389 None:intergenic 50.0%
CATGGTTTCTTGACCGGAAC+CGG - chr4_4:52721412-52721431 None:intergenic 50.0%
GGTGGACATGGTTTCTTGAC+CGG - chr4_4:52721313-52721332 None:intergenic 50.0%
GAAACCATGTCCACCACCAA+AGG + chr4_4:52721318-52721337 Msa0687740:CDS 50.0%
!! TCAACCTTTGGTGGTGGACA+TGG - chr4_4:52721325-52721344 None:intergenic 50.0%
ACTGGATGCTCAACCTTTGG+TGG - chr4_4:52721439-52721458 None:intergenic 50.0%
ACTGGAACGGGTGGTAAAAC+TGG - chr4_4:52721457-52721476 None:intergenic 50.0%
GGTTTGTATACTGGAACGGG+TGG - chr4_4:52721466-52721485 None:intergenic 50.0%
ACCGGTGGAGGTTTGTATAC+TGG - chr4_4:52721475-52721494 None:intergenic 50.0%
CATGGTTTCTTGATCGGGAC+TGG - chr4_4:52721517-52721536 None:intergenic 50.0%
ACTGGGTGCTCAATCTTTGG+TGG - chr4_4:52721541-52721560 None:intergenic 50.0%
ATTGGAACAACCGGTGGCTT+TGG - chr4_4:52721604-52721623 None:intergenic 50.0%
AGAGTTGGAAGAGGTGGACA+TGG - chr4_4:52721667-52721686 None:intergenic 50.0%
TTTGGAGGCAGAGTTGGAAG+AGG - chr4_4:52721676-52721695 None:intergenic 50.0%
! AAGCTCTTTGGAGGCAGAGT+TGG - chr4_4:52721682-52721701 None:intergenic 50.0%
! AAGCTCTTTGGAGGCAATGG+AGG - chr4_4:52721775-52721794 None:intergenic 50.0%
TGGTGGAAGAAGCTCTTTGG+AGG - chr4_4:52721784-52721803 None:intergenic 50.0%
! GGTGGCCACTTTCCAAACTT+TGG - chr4_4:52721862-52721881 None:intergenic 50.0%
!!! GGGTGATGGAAGAGGCTTTT+TGG - chr4_4:52721892-52721911 None:intergenic 50.0%
!! CAAACTTGGGGTGATGGAAG+AGG - chr4_4:52721900-52721919 None:intergenic 50.0%
CTCTTCCATCACCCCAAGTT+TGG + chr4_4:52721898-52721917 Msa0687740:CDS 50.0%
GAGGCCATGATCCAAACTTG+GGG - chr4_4:52721912-52721931 None:intergenic 50.0%
GGAGGCCATGATCCAAACTT+GGG - chr4_4:52721913-52721932 None:intergenic 50.0%
TGGAGGCCATGATCCAAACT+TGG - chr4_4:52721914-52721933 None:intergenic 50.0%
GTCCACCTTTGAACCATGTG+AGG + chr4_4:52719731-52719750 Msa0687740:five_prime_UTR 50.0%
ACAGTTGAGGTAGTTGGGCT+TGG + chr4_4:52720017-52720036 Msa0687740:CDS 50.0%
! AAGACTAGCCAGGCTTTCTC+AGG + chr4_4:52720071-52720090 Msa0687740:CDS 50.0%
! TTTTGCAGGCCATCATGAGC+AGG - chr4_4:52720764-52720783 None:intergenic 50.0%
ACCAGCAGCAGCAGTACTTA+GGG - chr4_4:52720828-52720847 None:intergenic 50.0%
TACCAGCAGCAGCAGTACTT+AGG - chr4_4:52720829-52720848 None:intergenic 50.0%
GGGGGGAATTGAGGTAAATC+AGG - chr4_4:52720935-52720954 None:intergenic 50.0%
TCATAGACAGGTGTAGGTGG+AGG - chr4_4:52721169-52721188 None:intergenic 50.0%
TAGGTGGAGGGAGAGGTTTA+TGG - chr4_4:52721222-52721241 None:intergenic 50.0%
CATACACAGGTGTAGGTGGA+GGG - chr4_4:52721234-52721253 None:intergenic 50.0%
TCATACACAGGTGTAGGTGG+AGG - chr4_4:52721235-52721254 None:intergenic 50.0%
TGATATACAGGCGTAGGTGG+AGG - chr4_4:52721268-52721287 None:intergenic 50.0%
TTCTTGACTGGAACAGGAGG+AGG - chr4_4:52721301-52721320 None:intergenic 50.0%
GGTTTCTTGACTGGAACAGG+AGG - chr4_4:52721304-52721323 None:intergenic 50.0%
GGTGGACATGGTTTCTTGAC+TGG - chr4_4:52721313-52721332 None:intergenic 50.0%
GAAACCATGTCCACCACCAA+AGG + chr4_4:52721318-52721337 Msa0687740:CDS 50.0%
!! TCAACCTTTGGTGGTGGACA+TGG - chr4_4:52721325-52721344 None:intergenic 50.0%
GGATGTTCAACCTTTGGTGG+TGG - chr4_4:52721331-52721350 None:intergenic 50.0%
TTGTATACTGGAGCAGGTGG+TGG - chr4_4:52721358-52721377 None:intergenic 50.0%
GGTTTGTATACTGGAGCAGG+TGG - chr4_4:52721361-52721380 None:intergenic 50.0%
GGAGGTTTGTATACTGGAGC+AGG - chr4_4:52721364-52721383 None:intergenic 50.0%
ACCGGAGGAGGTTTGTATAC+TGG - chr4_4:52721370-52721389 None:intergenic 50.0%
CATGGTTTCTTGACCGGAAC+CGG - chr4_4:52721412-52721431 None:intergenic 50.0%
GGTGGACATGGTTTCTTGAC+CGG - chr4_4:52721313-52721332 None:intergenic 50.0%
GAAACCATGTCCACCACCAA+AGG + chr4_4:52721318-52721337 Msa0687740:CDS 50.0%
!! TCAACCTTTGGTGGTGGACA+TGG - chr4_4:52721325-52721344 None:intergenic 50.0%
ACTGGATGCTCAACCTTTGG+TGG - chr4_4:52721439-52721458 None:intergenic 50.0%
ACTGGAACGGGTGGTAAAAC+TGG - chr4_4:52721457-52721476 None:intergenic 50.0%
GGTTTGTATACTGGAACGGG+TGG - chr4_4:52721466-52721485 None:intergenic 50.0%
ACCGGTGGAGGTTTGTATAC+TGG - chr4_4:52721475-52721494 None:intergenic 50.0%
CATGGTTTCTTGATCGGGAC+TGG - chr4_4:52721517-52721536 None:intergenic 50.0%
ACTGGGTGCTCAATCTTTGG+TGG - chr4_4:52721541-52721560 None:intergenic 50.0%
ATTGGAACAACCGGTGGCTT+TGG - chr4_4:52721604-52721623 None:intergenic 50.0%
AGAGTTGGAAGAGGTGGACA+TGG - chr4_4:52721667-52721686 None:intergenic 50.0%
TTTGGAGGCAGAGTTGGAAG+AGG - chr4_4:52721676-52721695 None:intergenic 50.0%
! AAGCTCTTTGGAGGCAGAGT+TGG - chr4_4:52721682-52721701 None:intergenic 50.0%
! AAGCTCTTTGGAGGCAATGG+AGG - chr4_4:52721775-52721794 None:intergenic 50.0%
TGGTGGAAGAAGCTCTTTGG+AGG - chr4_4:52721784-52721803 None:intergenic 50.0%
! GGTGGCCACTTTCCAAACTT+TGG - chr4_4:52721862-52721881 None:intergenic 50.0%
!!! GGGTGATGGAAGAGGCTTTT+TGG - chr4_4:52721892-52721911 None:intergenic 50.0%
!! CAAACTTGGGGTGATGGAAG+AGG - chr4_4:52721900-52721919 None:intergenic 50.0%
CTCTTCCATCACCCCAAGTT+TGG + chr4_4:52721898-52721917 Msa0687740:CDS 50.0%
GAGGCCATGATCCAAACTTG+GGG - chr4_4:52721912-52721931 None:intergenic 50.0%
GGAGGCCATGATCCAAACTT+GGG - chr4_4:52721913-52721932 None:intergenic 50.0%
TGGAGGCCATGATCCAAACT+TGG - chr4_4:52721914-52721933 None:intergenic 50.0%
GCACCTTGTCCTGCTCATGA+TGG + chr4_4:52720752-52720771 Msa0687740:CDS 55.0%
AGGCCATCATGAGCAGGACA+AGG - chr4_4:52720758-52720777 None:intergenic 55.0%
! ACCCTAAGTACTGCTGCTGC+TGG + chr4_4:52720824-52720843 Msa0687740:CDS 55.0%
ACAGGTGTAGGAGGAGGGAT+AGG - chr4_4:52721130-52721149 None:intergenic 55.0%
ACAGGTGTAGGTGGAGGAAG+AGG - chr4_4:52721163-52721182 None:intergenic 55.0%
ACTGGAACAGGAGGAGGAAG+AGG - chr4_4:52721295-52721314 None:intergenic 55.0%
!! GGTGGTTGTGGCTTTGGAAC+CGG - chr4_4:52721388-52721407 None:intergenic 55.0%
TCCAAAGCCACAACCACCAC+CGG + chr4_4:52721390-52721409 Msa0687740:CDS 55.0%
GGATGCTCAACCTTTGGTGG+TGG - chr4_4:52721436-52721455 None:intergenic 55.0%
!! CAAACCTCCACCGGTTCCAA+AGG + chr4_4:52721480-52721499 Msa0687740:CDS 55.0%
!! GGTGGAAGTGCCTTTGGAAC+CGG - chr4_4:52721493-52721512 None:intergenic 55.0%
!! ACTGGTGGTGGAAGTGCCTT+TGG - chr4_4:52721499-52721518 None:intergenic 55.0%
! TTCTTGATCGGGACTGGTGG+TGG - chr4_4:52721511-52721530 None:intergenic 55.0%
GGTTTCTTGATCGGGACTGG+TGG - chr4_4:52721514-52721533 None:intergenic 55.0%
GTTGGAAGAGGTGGACATGG+TGG - chr4_4:52721664-52721683 None:intergenic 55.0%
!! GGGTGGTGGAAGAAGCTCTT+TGG - chr4_4:52721787-52721806 None:intergenic 55.0%
GCACCTTGTCCTGCTCATGA+TGG + chr4_4:52720752-52720771 Msa0687740:CDS 55.0%
AGGCCATCATGAGCAGGACA+AGG - chr4_4:52720758-52720777 None:intergenic 55.0%
! ACCCTAAGTACTGCTGCTGC+TGG + chr4_4:52720824-52720843 Msa0687740:CDS 55.0%
ACAGGTGTAGGAGGAGGGAT+AGG - chr4_4:52721130-52721149 None:intergenic 55.0%
ACAGGTGTAGGTGGAGGAAG+AGG - chr4_4:52721163-52721182 None:intergenic 55.0%
ACTGGAACAGGAGGAGGAAG+AGG - chr4_4:52721295-52721314 None:intergenic 55.0%
!! GGTGGTTGTGGCTTTGGAAC+CGG - chr4_4:52721388-52721407 None:intergenic 55.0%
TCCAAAGCCACAACCACCAC+CGG + chr4_4:52721390-52721409 Msa0687740:CDS 55.0%
GGATGCTCAACCTTTGGTGG+TGG - chr4_4:52721436-52721455 None:intergenic 55.0%
!! CAAACCTCCACCGGTTCCAA+AGG + chr4_4:52721480-52721499 Msa0687740:CDS 55.0%
!! GGTGGAAGTGCCTTTGGAAC+CGG - chr4_4:52721493-52721512 None:intergenic 55.0%
!! ACTGGTGGTGGAAGTGCCTT+TGG - chr4_4:52721499-52721518 None:intergenic 55.0%
! TTCTTGATCGGGACTGGTGG+TGG - chr4_4:52721511-52721530 None:intergenic 55.0%
GGTTTCTTGATCGGGACTGG+TGG - chr4_4:52721514-52721533 None:intergenic 55.0%
GTTGGAAGAGGTGGACATGG+TGG - chr4_4:52721664-52721683 None:intergenic 55.0%
!! GGGTGGTGGAAGAAGCTCTT+TGG - chr4_4:52721787-52721806 None:intergenic 55.0%
ATAGGCACAGGTGGAGGGCA+AGG - chr4_4:52721097-52721116 None:intergenic 60.0%
TGGTAAACAGGCACAGGCGG+AGG - chr4_4:52721202-52721221 None:intergenic 60.0%
ACAGGTGTAGGTGGAGGGAG+AGG - chr4_4:52721229-52721248 None:intergenic 60.0%
ACAGGCGTAGGTGGAGGAAG+AGG - chr4_4:52721262-52721281 None:intergenic 60.0%
!! ACTGGAGCAGGTGGTGGAAC+TGG - chr4_4:52721352-52721371 None:intergenic 60.0%
!! TGTGGCTTTGGAACCGGAGG+AGG - chr4_4:52721382-52721401 None:intergenic 60.0%
!! GGTTGTGGCTTTGGAACCGG+AGG - chr4_4:52721385-52721404 None:intergenic 60.0%
! ACCGGTGGTGGTTGTGGCTT+TGG - chr4_4:52721394-52721413 None:intergenic 60.0%
TTCTTGACCGGAACCGGTGG+TGG - chr4_4:52721406-52721425 None:intergenic 60.0%
GGTTTCTTGACCGGAACCGG+TGG - chr4_4:52721409-52721428 None:intergenic 60.0%
!! AGTGCCTTTGGAACCGGTGG+AGG - chr4_4:52721487-52721506 None:intergenic 60.0%
!! GGAAGTGCCTTTGGAACCGG+TGG - chr4_4:52721490-52721509 None:intergenic 60.0%
GGAGGCAGAGTTGGAAGAGG+TGG - chr4_4:52721673-52721692 None:intergenic 60.0%
ATAGGCACAGGTGGAGGGCA+AGG - chr4_4:52721097-52721116 None:intergenic 60.0%
TGGTAAACAGGCACAGGCGG+AGG - chr4_4:52721202-52721221 None:intergenic 60.0%
ACAGGTGTAGGTGGAGGGAG+AGG - chr4_4:52721229-52721248 None:intergenic 60.0%
ACAGGCGTAGGTGGAGGAAG+AGG - chr4_4:52721262-52721281 None:intergenic 60.0%
!! ACTGGAGCAGGTGGTGGAAC+TGG - chr4_4:52721352-52721371 None:intergenic 60.0%
!! TGTGGCTTTGGAACCGGAGG+AGG - chr4_4:52721382-52721401 None:intergenic 60.0%
!! GGTTGTGGCTTTGGAACCGG+AGG - chr4_4:52721385-52721404 None:intergenic 60.0%
! ACCGGTGGTGGTTGTGGCTT+TGG - chr4_4:52721394-52721413 None:intergenic 60.0%
TTCTTGACCGGAACCGGTGG+TGG - chr4_4:52721406-52721425 None:intergenic 60.0%
GGTTTCTTGACCGGAACCGG+TGG - chr4_4:52721409-52721428 None:intergenic 60.0%
!! AGTGCCTTTGGAACCGGTGG+AGG - chr4_4:52721487-52721506 None:intergenic 60.0%
!! GGAAGTGCCTTTGGAACCGG+TGG - chr4_4:52721490-52721509 None:intergenic 60.0%
GGAGGCAGAGTTGGAAGAGG+TGG - chr4_4:52721673-52721692 None:intergenic 60.0%
ACAGGCACAGGCGGAGGAAG+AGG - chr4_4:52721196-52721215 None:intergenic 65.0%
!! GCCACAACCACCACCGGTTC+CGG + chr4_4:52721396-52721415 Msa0687740:CDS 65.0%
! ACCGGAACCGGTGGTGGTTG+TGG - chr4_4:52721400-52721419 None:intergenic 65.0%
ACAGGCACAGGCGGAGGAAG+AGG - chr4_4:52721196-52721215 None:intergenic 65.0%
!! GCCACAACCACCACCGGTTC+CGG + chr4_4:52721396-52721415 Msa0687740:CDS 65.0%
! ACCGGAACCGGTGGTGGTTG+TGG - chr4_4:52721400-52721419 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 52719649 52721951 52719649 ID=Msa0687740;Name=Msa0687740
chr4_4 mRNA 52719649 52721951 52719649 ID=Msa0687740-mRNA-1;Parent=Msa0687740;Name=Msa0687740-mRNA-1;_AED=0.03;_eAED=0.03;_QI=272|1|0.5|1|1|1|2|0|512
chr4_4 exon 52719649 52720092 52719649 ID=Msa0687740-mRNA-1:exon:13869;Parent=Msa0687740-mRNA-1
chr4_4 exon 52720585 52721951 52720585 ID=Msa0687740-mRNA-1:exon:13870;Parent=Msa0687740-mRNA-1
chr4_4 five_prime_UTR 52719649 52719920 52719649 ID=Msa0687740-mRNA-1:five_prime_utr;Parent=Msa0687740-mRNA-1
chr4_4 CDS 52719921 52720092 52719921 ID=Msa0687740-mRNA-1:cds;Parent=Msa0687740-mRNA-1
chr4_4 CDS 52720585 52721951 52720585 ID=Msa0687740-mRNA-1:cds;Parent=Msa0687740-mRNA-1
Gene Sequence

>Msa0687740

ATGCAGATTTTCACTCTGCGCCAAAGAGCACTTTTGTGCTCTTGGCTGTTTGTTGTCTTTTTGGTACTAGGTTTTTGCTATGGTGGAGACCATAGTACAGTTGAGGTAGTTGGGCTTGGAGAATGCGCAGATTGCATTCAGAACAATATTAAGACTAGCCAGGCTTTCTCAGGGCTACATGTAACAATTGACTGCAAAGAAGCAAATGGACATTTTAAAACAAGAGGGGCAGGTGAGCTTGATAAAAAAGGAAATTTCAAAGTATCCCTTCCTCAAGAAATTGTAAAAGAAGGTGAACTGAAAGAAGAATGTTATGCTCAGCTACATAGTGCAACAGCTGCACCTTGTCCTGCTCATGATGGCCTGCAAAACACCAAAATTGTCATCAAGTCAAAATCTGATGACAAACACACCCTAAGTACTGCTGCTGCTGGTAAACTCAAATTTTCATCAGCAACATGTACCTCCAAATTCTTTTGGCCTCTCTTCAAACATCCTCTTTTTCCTAAGCATCCTCATCCTGATTTACCTCAATTCCCCCCTAAAGTTTTTCCACCATTTCCACCAAAGATTTTCCATAAACACCCTCTTTTTCCTCCTGTTCCTATCTACAAGAAACCTCCATTTCCTCATATTCCTATCTACAAACCTCCCTTTCCTCATATTCCCATCTACAAGAAACCTTGCCCTCCACCTGTGCCTATATATGAAAAACCTATCCCTCCTCCTACACCTGTTTATGAGAAACCTCTTCCTCCACCTACACCTGTCTATGAGAAACCTCTTCCTCCGCCTGTGCCTGTTTACCATAAACCTCTCCCTCCACCTACACCTGTGTATGAGAAACCTCTTCCTCCACCTACGCCTGTATATCATAAACCTCTTCCTCCTCCTGTTCCAGTCAAGAAACCATGTCCACCACCAAAGGTTGAACATCCAGTTCCACCACCTGCTCCAGTATACAAACCTCCTCCGGTTCCAAAGCCACAACCACCACCGGTTCCGGTCAAGAAACCATGTCCACCACCAAAGGTTGAGCATCCAGTTTTACCACCCGTTCCAGTATACAAACCTCCACCGGTTCCAAAGGCACTTCCACCACCAGTCCCGATCAAGAAACCATGTCCACCAAAGATTGAGCACCCAGTTCTACCACCTGTTCCAATATATAAGCCTCCAGTAGTAATTCCAAAGCCACCGGTTGTTCCAATTTACAAACCACCAGTTGTTCTTCCTCCATTCAAGAAACCACCATGTCCACCTCTTCCAACTCTGCCTCCAAAGAGCTTTTTCCATCACCCCAAGTTTGGAAAATTGCCTCCAAAGAGCTTTTTTCATCACCCTAAGTATGGAAAATGGCCTCCATTGCCTCCAAAGAGCTTCTTCCACCACCCCAAGTATTTTGGAAAATGGCCACCAATCCCTCATAAGAGCTTCTTCCATCACCCAAAGTTTGGAAAGTGGCCACCAATTAATCCAAAAAGCCTCTTCCATCACCCCAAGTTTGGATCATGGCCTCCACTAAGTCCTCATAATTAG
Protein sequence

>Msa0687740

MQIFTLRQRALLCSWLFVVFLVLGFCYGGDHSTVEVVGLGECADCIQNNIKTSQAFSGLHVTIDCKEANGHFKTRGAGELDKKGNFKVSLPQEIVKEGELKEECYAQLHSATAAPCPAHDGLQNTKIVIKSKSDDKHTLSTAAAGKLKFSSATCTSKFFWPLFKHPLFPKHPHPDLPQFPPKVFPPFPPKIFHKHPLFPPVPIYKKPPFPHIPIYKPPFPHIPIYKKPCPPPVPIYEKPIPPPTPVYEKPLPPPTPVYEKPLPPPVPVYHKPLPPPTPVYEKPLPPPTPVYHKPLPPPVPVKKPCPPPKVEHPVPPPAPVYKPPPVPKPQPPPVPVKKPCPPPKVEHPVLPPVPVYKPPPVPKALPPPVPIKKPCPPKIEHPVLPPVPIYKPPVVIPKPPVVPIYKPPVVLPPFKKPPCPPLPTLPPKSFFHHPKFGKLPPKSFFHHPKYGKWPPLPPKSFFHHPKYFGKWPPIPHKSFFHHPKFGKWPPINPKSLFHHPKFGSWPPLSPHN*