Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0754340 | XP_003611292.2 | 92.754 | 138 | 10 | 0 | 17 | 154 | 17 | 154 | 3.78e-89 | 266 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0754340 | G7JW17 | 92.754 | 138 | 10 | 0 | 17 | 154 | 17 | 154 | 1.80e-89 | 266 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002690 | Msa0754340 | 0.802816 | 4.688941e-49 | -8.615850e-47 |
| Msa0002700 | Msa0754340 | 0.804325 | 2.280113e-49 | -8.615850e-47 |
| Msa0021570 | Msa0754340 | 0.804156 | 2.473423e-49 | -8.615850e-47 |
| Msa0044700 | Msa0754340 | 0.817189 | 3.751725e-52 | -8.615850e-47 |
| Msa0046020 | Msa0754340 | 0.814653 | 1.380725e-51 | -8.615850e-47 |
| Msa0058140 | Msa0754340 | 0.802304 | 5.978776e-49 | -8.615850e-47 |
| Msa0069590 | Msa0754340 | 0.807578 | 4.721317e-50 | -8.615850e-47 |
| Msa0075080 | Msa0754340 | 0.801037 | 1.087908e-48 | -8.615850e-47 |
| Msa0075820 | Msa0754340 | 0.811492 | 6.813943e-51 | -8.615850e-47 |
| Msa0105500 | Msa0754340 | 0.802598 | 5.199066e-49 | -8.615850e-47 |
| Msa0116780 | Msa0754340 | 0.807036 | 6.149106e-50 | -8.615850e-47 |
| Msa0606340 | Msa0754340 | 0.800554 | 1.365121e-48 | -8.615850e-47 |
| Msa0607070 | Msa0754340 | 0.809797 | 1.584486e-50 | -8.615850e-47 |
| Msa0608280 | Msa0754340 | 0.803406 | 3.539430e-49 | -8.615850e-47 |
| Msa0612950 | Msa0754340 | 0.808464 | 3.058131e-50 | -8.615850e-47 |
| Msa0615460 | Msa0754340 | 0.813191 | 2.900292e-51 | -8.615850e-47 |
| Msa0622450 | Msa0754340 | 0.806761 | 7.030741e-50 | -8.615850e-47 |
| Msa0646310 | Msa0754340 | 0.802904 | 4.496514e-49 | -8.615850e-47 |
| Msa0654850 | Msa0754340 | 0.804413 | 2.186434e-49 | -8.615850e-47 |
| Msa0687650 | Msa0754340 | 0.811408 | 7.104962e-51 | -8.615850e-47 |
| Msa0687740 | Msa0754340 | 0.804125 | 2.510270e-49 | -8.615850e-47 |
| Msa0690100 | Msa0754340 | 0.800271 | 1.558820e-48 | -8.615850e-47 |
| Msa0698510 | Msa0754340 | 0.818186 | 2.235778e-52 | -8.615850e-47 |
| Msa0698680 | Msa0754340 | 0.820279 | 7.458913e-53 | -8.615850e-47 |
| Msa0711860 | Msa0754340 | 0.800137 | 1.659604e-48 | -8.615850e-47 |
| Msa0750200 | Msa0754340 | 0.803252 | 3.810126e-49 | -8.615850e-47 |
| Msa0754340 | Msa0772530 | 0.800312 | 1.528893e-48 | -8.615850e-47 |
| Msa0754340 | Msa0793130 | 0.814328 | 1.629588e-51 | -8.615850e-47 |
| Msa0754340 | Msa0796110 | 0.968241 | 2.129465e-128 | -8.615850e-47 |
| Msa0754340 | Msa0831710 | 0.808645 | 2.797471e-50 | -8.615850e-47 |
| Msa0754340 | Msa0833790 | 0.939121 | 2.161359e-99 | -8.615850e-47 |
| Msa0754340 | Msa0837040 | 0.807072 | 6.044006e-50 | -8.615850e-47 |
| Msa0754340 | Msa0866060 | 0.807719 | 4.405765e-50 | -8.615850e-47 |
| Msa0754340 | Msa0866150 | 0.815838 | 7.530977e-52 | -8.615850e-47 |
| Msa0754340 | Msa0868500 | 0.819627 | 1.051505e-52 | -8.615850e-47 |
| Msa0754340 | Msa0868510 | 0.813237 | 2.833214e-51 | -8.615850e-47 |
| Msa0754340 | Msa0868520 | 0.814998 | 1.158016e-51 | -8.615850e-47 |
| Msa0754340 | Msa0871860 | 0.815614 | 8.446325e-52 | -8.615850e-47 |
| Msa0754340 | Msa0888520 | 0.804664 | 1.938369e-49 | -8.615850e-47 |
| Msa0754340 | Msa0905210 | 0.807226 | 5.604380e-50 | -8.615850e-47 |
| Msa0754340 | Msa0933320 | 0.803536 | 3.327029e-49 | -8.615850e-47 |
| Msa0754340 | Msa0934100 | 0.815174 | 1.058316e-51 | -8.615850e-47 |
| Msa0754340 | Msa0937180 | 0.815112 | 1.092417e-51 | -8.615850e-47 |
| Msa0754340 | Msa0937190 | 0.827847 | 1.247664e-54 | -8.615850e-47 |
| Msa0754340 | Msa0941410 | 0.808927 | 2.435305e-50 | -8.615850e-47 |
| Msa0754340 | Msa0941420 | 0.808231 | 3.428589e-50 | -8.615850e-47 |
| Msa0754340 | Msa0945160 | 0.809105 | 2.229896e-50 | -8.615850e-47 |
| Msa0754340 | Msa0971100 | 0.803038 | 4.217981e-49 | -8.615850e-47 |
| Msa0754340 | Msa0971690 | 0.804511 | 2.086267e-49 | -8.615850e-47 |
| Msa0754340 | Msa0978540 | 0.815970 | 7.036486e-52 | -8.615850e-47 |
| Msa0754340 | Msa0978550 | 0.811915 | 5.512680e-51 | -8.615850e-47 |
| Msa0754340 | Msa0978560 | 0.812268 | 4.618864e-51 | -8.615850e-47 |
| Msa0754340 | Msa1002550 | 0.809056 | 2.284287e-50 | -8.615850e-47 |
| Msa0754340 | Msa1031190 | 0.811432 | 7.023077e-51 | -8.615850e-47 |
| Msa0754340 | Msa1058550 | 0.809874 | 1.525329e-50 | -8.615850e-47 |
| Msa0754340 | Msa1068010 | 0.807684 | 4.481233e-50 | -8.615850e-47 |
| Msa0754340 | Msa1070370 | 0.815519 | 8.870888e-52 | -8.615850e-47 |
| Msa0754340 | Msa1119420 | 0.813093 | 3.047097e-51 | -8.615850e-47 |
| Msa0754340 | Msa1130150 | 0.802675 | 5.011970e-49 | -8.615850e-47 |
| Msa0754340 | Msa1132740 | 0.968468 | 1.014580e-128 | -8.615850e-47 |
| Msa0754340 | Msa1144380 | 0.800003 | 1.766821e-48 | -8.615850e-47 |
| Msa0754340 | Msa1158180 | 0.811500 | 6.787691e-51 | -8.615850e-47 |
| Msa0754340 | Msa1171640 | 0.804331 | 2.274494e-49 | -8.615850e-47 |
| Msa0754340 | Msa1175340 | 0.828210 | 1.020457e-54 | -8.615850e-47 |
| Msa0754340 | Msa1197740 | 0.818377 | 2.023254e-52 | -8.615850e-47 |
| Msa0754340 | Msa1199700 | 0.801230 | 9.931593e-49 | -8.615850e-47 |
| Msa0754340 | Msa1211930 | 0.823531 | 1.317125e-53 | -8.615850e-47 |
| Msa0754340 | Msa1225280 | 0.807986 | 3.865607e-50 | -8.615850e-47 |
| Msa0754340 | Msa1235620 | 0.802140 | 6.459823e-49 | -8.615850e-47 |
| Msa0754340 | Msa1251440 | 0.819220 | 1.302423e-52 | -8.615850e-47 |
| Msa0754340 | Msa1263600 | 0.800514 | 1.390903e-48 | -8.615850e-47 |
| Msa0754340 | Msa1266750 | 0.801754 | 7.754394e-49 | -8.615850e-47 |
| Msa0754340 | Msa1277270 | 0.802260 | 6.103953e-49 | -8.615850e-47 |
| Msa0754340 | Msa1279250 | 0.805002 | 1.647322e-49 | -8.615850e-47 |
| Msa0754340 | Msa1292060 | 0.807738 | 4.364382e-50 | -8.615850e-47 |
| Msa0754340 | Msa1303040 | 0.809949 | 1.469327e-50 | -8.615850e-47 |
| Msa0754340 | Msa1303690 | 0.810281 | 1.246254e-50 | -8.615850e-47 |
| Msa0754340 | Msa1317090 | 0.801308 | 9.571124e-49 | -8.615850e-47 |
| Msa0754340 | Msa1334690 | 0.825486 | 4.566050e-54 | -8.615850e-47 |
| Msa0754340 | Msa1341710 | 0.800402 | 1.465447e-48 | -8.615850e-47 |
| Msa0754340 | Msa1341850 | 0.800326 | 1.519137e-48 | -8.615850e-47 |
| Msa0754340 | Msa1350130 | 0.816155 | 6.397338e-52 | -8.615850e-47 |
| Msa0754340 | Msa1363170 | 0.812238 | 4.687616e-51 | -8.615850e-47 |
| Msa0754340 | Msa1372460 | 0.806879 | 6.637380e-50 | -8.615850e-47 |
| Msa0754340 | Msa1373420 | 0.814004 | 1.921426e-51 | -8.615850e-47 |
| Msa0754340 | Msa1386820 | 0.835285 | 1.833885e-56 | -8.615850e-47 |
| Msa0754340 | Msa1388010 | 0.802155 | 6.416685e-49 | -8.615850e-47 |
| Msa0754340 | Msa1407160 | 0.803519 | 3.353285e-49 | -8.615850e-47 |
| Msa0754340 | Msa1415510 | 0.804594 | 2.004136e-49 | -8.615850e-47 |
| Msa0754340 | Msa1434860 | 0.800331 | 1.515281e-48 | -8.615850e-47 |
| Msa0754340 | Msa1440140 | 0.800740 | 1.250827e-48 | -8.615850e-47 |
| Msa0754340 | Msa1460340 | 0.813723 | 2.215233e-51 | -8.615850e-47 |
| Msa0754340 | Msa1462700 | 0.815270 | 1.007329e-51 | -8.615850e-47 |
| Msa0124460 | Msa0754340 | 0.820899 | 5.373688e-53 | -8.615850e-47 |
| Msa0127110 | Msa0754340 | 0.812879 | 3.394216e-51 | -8.615850e-47 |
| Msa0145990 | Msa0754340 | 0.802460 | 5.551359e-49 | -8.615850e-47 |
| Msa0168950 | Msa0754340 | 0.812805 | 3.523401e-51 | -8.615850e-47 |
| Msa0216900 | Msa0754340 | 0.800695 | 1.277453e-48 | -8.615850e-47 |
| Msa0231180 | Msa0754340 | 0.814881 | 1.229339e-51 | -8.615850e-47 |
| Msa0380470 | Msa0754340 | 0.801818 | 7.523507e-49 | -8.615850e-47 |
| Msa0386230 | Msa0754340 | 0.814563 | 1.445554e-51 | -8.615850e-47 |
| Msa0404710 | Msa0754340 | 0.821561 | 3.781234e-53 | -8.615850e-47 |
| Msa0416430 | Msa0754340 | 0.804985 | 1.660635e-49 | -8.615850e-47 |
| Msa0428280 | Msa0754340 | 0.800420 | 1.453376e-48 | -8.615850e-47 |
| Msa0429990 | Msa0754340 | 0.803452 | 3.463532e-49 | -8.615850e-47 |
| Msa0436660 | Msa0754340 | 0.800534 | 1.377570e-48 | -8.615850e-47 |
| Msa0437820 | Msa0754340 | 0.807769 | 4.298967e-50 | -8.615850e-47 |
| Msa0444770 | Msa0754340 | 0.800882 | 1.170207e-48 | -8.615850e-47 |
| Msa0457600 | Msa0754340 | 0.807667 | 4.520304e-50 | -8.615850e-47 |
| Msa0462240 | Msa0754340 | 0.803362 | 3.614407e-49 | -8.615850e-47 |
| Msa0462530 | Msa0754340 | 0.819762 | 9.794331e-53 | -8.615850e-47 |
| Msa0463030 | Msa0754340 | 0.804712 | 1.893372e-49 | -8.615850e-47 |
| Msa0474290 | Msa0754340 | 0.804098 | 2.542978e-49 | -8.615850e-47 |
| Msa0476140 | Msa0754340 | 0.800093 | 1.694150e-48 | -8.615850e-47 |
| Msa0247340 | Msa0754340 | 0.804911 | 1.720770e-49 | -8.615850e-47 |
| Msa0253320 | Msa0754340 | 0.803730 | 3.032277e-49 | -8.615850e-47 |
| Msa0266330 | Msa0754340 | 0.800906 | 1.156838e-48 | -8.615850e-47 |
| Msa0269610 | Msa0754340 | 0.804916 | 1.717086e-49 | -8.615850e-47 |
| Msa0290590 | Msa0754340 | 0.813038 | 3.133386e-51 | -8.615850e-47 |
| Msa0296100 | Msa0754340 | 0.819791 | 9.646198e-53 | -8.615850e-47 |
| Msa0298820 | Msa0754340 | 0.820167 | 7.912429e-53 | -8.615850e-47 |
| Msa0310270 | Msa0754340 | 0.801056 | 1.077772e-48 | -8.615850e-47 |
| Msa0317820 | Msa0754340 | 0.807780 | 4.277378e-50 | -8.615850e-47 |
| Msa0329050 | Msa0754340 | 0.840364 | 9.093416e-58 | -8.615850e-47 |
| Msa0334480 | Msa0754340 | 0.804838 | 1.782367e-49 | -8.615850e-47 |
| Msa0341950 | Msa0754340 | 0.803298 | 3.726955e-49 | -8.615850e-47 |
| Msa0500580 | Msa0754340 | 0.802945 | 4.409525e-49 | -8.615850e-47 |
| Msa0506700 | Msa0754340 | 0.805073 | 1.592152e-49 | -8.615850e-47 |
| Msa0507960 | Msa0754340 | 0.800359 | 1.495315e-48 | -8.615850e-47 |
| Msa0518150 | Msa0754340 | 0.801879 | 7.310782e-49 | -8.615850e-47 |
| Msa0518720 | Msa0754340 | 0.807241 | 5.565274e-50 | -8.615850e-47 |
| Msa0522510 | Msa0754340 | 0.800800 | 1.215639e-48 | -8.615850e-47 |
| Msa0527420 | Msa0754340 | 0.804530 | 2.066994e-49 | -8.615850e-47 |
| Msa0549700 | Msa0754340 | 0.800344 | 1.506403e-48 | -8.615850e-47 |
| Msa0550980 | Msa0754340 | 0.800835 | 1.195959e-48 | -8.615850e-47 |
| Msa0552920 | Msa0754340 | 0.809733 | 1.635172e-50 | -8.615850e-47 |
| Msa0557440 | Msa0754340 | 0.800606 | 1.331747e-48 | -8.615850e-47 |
| Msa0561450 | Msa0754340 | 0.815070 | 1.116174e-51 | -8.615850e-47 |
| Msa0580890 | Msa0754340 | 0.801319 | 9.525586e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 47 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTACAAACAAGCTCATTTAA+AGG | 0.172104 | 5_2:-7891716 | Msa0754340:three_prime_UTR |
| GGTGATAATGGTATAATATA+TGG | 0.241626 | 5_2:+7891547 | None:intergenic |
| GCATGTACCTTTATATTTGA+TGG | 0.261955 | 5_2:+7891601 | None:intergenic |
| TCAAAGTTTGTATTGTATCT+AGG | 0.321676 | 5_2:-7891634 | Msa0754340:three_prime_UTR |
| AACAAAATACCATTTCAATA+AGG | 0.346795 | 5_2:-7895297 | Msa0754340:intron |
| TTAATCCAACCTTATTGAAA+TGG | 0.377715 | 5_2:+7895288 | None:intergenic |
| TTGTATGAATGTCTAGGTTC+AGG | 0.383294 | 5_2:+7895444 | None:intergenic |
| TTGAGTAGTAATGGTGATAA+TGG | 0.383843 | 5_2:+7891535 | None:intergenic |
| TCTTCAACATTGTGCTGAGC+TGG | 0.397887 | 5_2:+7891886 | None:intergenic |
| GAAGGGATGGCGTACCCGTT+TGG | 0.408175 | 5_2:+7894380 | None:intergenic |
| AAGTAAACCATCAAATATAA+AGG | 0.416876 | 5_2:-7891608 | Msa0754340:three_prime_UTR |
| CATGGTTGTGCAGGCTGAAA+GGG | 0.439466 | 5_2:-7891932 | Msa0754340:intron |
| GTGATAATGGTATAATATAT+GGG | 0.448383 | 5_2:+7891548 | None:intergenic |
| GGGACATGCAAGGTCAATGC+TGG | 0.458452 | 5_2:-7891911 | Msa0754340:CDS |
| TGCAGGGTCAACTTTCCAAA+CGG | 0.463339 | 5_2:-7894395 | Msa0754340:intron |
| TATGTCCTCTGCATTCTCAT+TGG | 0.469408 | 5_2:+7891846 | None:intergenic |
| TAAAATGCAATACAAGAGTA+AGG | 0.477807 | 5_2:+7895413 | None:intergenic |
| ATTAGACAATGTTAAATTGT+CGG | 0.482811 | 5_2:-7894939 | Msa0754340:CDS |
| GCAGGGTCAACTTTCCAAAC+GGG | 0.494200 | 5_2:-7894394 | Msa0754340:intron |
| CAAGGTTTGTATGAATGTCT+AGG | 0.501665 | 5_2:+7895438 | None:intergenic |
| ATATTACCTTTGCTGCAAGA+AGG | 0.508485 | 5_2:+7894362 | None:intergenic |
| GCAAAGAACCACAGAGGATG+AGG | 0.512478 | 5_2:+7895357 | None:intergenic |
| TATTACCTTTGCTGCAAGAA+GGG | 0.517311 | 5_2:+7894363 | None:intergenic |
| AAACATAACTTGAGTAGTAA+TGG | 0.517566 | 5_2:+7891526 | None:intergenic |
| GTTAACTACATTAAGTGTAA+AGG | 0.521339 | 5_2:-7894912 | Msa0754340:CDS |
| GCCATCCCTTCTTGCAGCAA+AGG | 0.535432 | 5_2:-7894368 | Msa0754340:intron |
| ACCTTTGCTGCAAGAAGGGA+TGG | 0.535458 | 5_2:+7894367 | None:intergenic |
| ATTCTCATACAACATCCAAA+AGG | 0.541165 | 5_2:+7891676 | None:intergenic |
| AGGATGAGGAGCAGAAGAAG+AGG | 0.541757 | 5_2:+7895371 | None:intergenic |
| AGGATTATGCACAACCTCAT+CGG | 0.565341 | 5_2:-7891819 | Msa0754340:CDS |
| TGTAAAGGATAATAAGCTAG+AGG | 0.587951 | 5_2:-7894897 | Msa0754340:CDS |
| GATAATGGTATAATATATGG+GGG | 0.590897 | 5_2:+7891550 | None:intergenic |
| ACATGGTTGTGCAGGCTGAA+AGG | 0.598698 | 5_2:-7891933 | Msa0754340:intron |
| CTTCTGCTCCTCATCCTCTG+TGG | 0.599025 | 5_2:-7895365 | Msa0754340:CDS |
| TGATAATGGTATAATATATG+GGG | 0.602274 | 5_2:+7891549 | None:intergenic |
| AGGTACATGCAATACTGCAT+TGG | 0.604721 | 5_2:-7891588 | Msa0754340:three_prime_UTR |
| GCACAATGTTGAAGAAACAA+TGG | 0.606943 | 5_2:-7891878 | Msa0754340:CDS |
| CAATACAAGAGTAAGGCTCA+AGG | 0.610585 | 5_2:+7895420 | None:intergenic |
| ATGGTTGTGCAGGCTGAAAG+GGG | 0.610618 | 5_2:-7891931 | Msa0754340:intron |
| GGACATGCAAGGTCAATGCT+GGG | 0.614579 | 5_2:-7891910 | Msa0754340:CDS |
| TGAATAGGTGCTTTCCGATG+AGG | 0.626859 | 5_2:+7891805 | None:intergenic |
| GAATGCAGAGGACATAGTCG+AGG | 0.680802 | 5_2:-7891839 | Msa0754340:CDS |
| ACTTTGAAGAAAGTGATCGT+AGG | 0.682204 | 5_2:-7894803 | Msa0754340:intron |
| ATAATGGTATAATATATGGG+GGG | 0.694060 | 5_2:+7891551 | None:intergenic |
| AAACACCAATGAGAATGCAG+AGG | 0.695538 | 5_2:-7891851 | Msa0754340:CDS |
| AGGCTGAAAGGGGACATGCA+AGG | 0.696024 | 5_2:-7891921 | Msa0754340:CDS |
| ATGCATGCAAAGAACCACAG+AGG | 0.789583 | 5_2:+7895351 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTGTAAAAAAAAAAATTTG+AGG | - | chr5_2:7891842-7891861 | Msa0754340:CDS | 10.0% |
| !!! | ATTTATATACATTGTTTTTA+GGG | + | chr5_2:7893161-7893180 | None:intergenic | 10.0% |
| !!! | AATTTATATACATTGTTTTT+AGG | + | chr5_2:7893162-7893181 | None:intergenic | 10.0% |
| !! | AAAAAAATATTAAAAATGCT+AGG | + | chr5_2:7894485-7894504 | None:intergenic | 10.0% |
| !!! | TAGTATATCTTTTTTTTTTT+AGG | - | chr5_2:7894582-7894601 | Msa0754340:intron | 10.0% |
| !!! | AGTATATCTTTTTTTTTTTA+GGG | - | chr5_2:7894583-7894602 | Msa0754340:intron | 10.0% |
| !! | CATGTTAATATTAATATTAA+AGG | - | chr5_2:7894814-7894833 | Msa0754340:CDS | 10.0% |
| !! | TAGATAGTTATAAACTTATA+AGG | + | chr5_2:7891755-7891774 | None:intergenic | 15.0% |
| !! | TAAAATTTGTGATTATATTC+AGG | - | chr5_2:7892043-7892062 | Msa0754340:intron | 15.0% |
| !! | TTATTACTAAATTATTGCTA+AGG | - | chr5_2:7892448-7892467 | Msa0754340:intron | 15.0% |
| !! | TTACAATAAGCATAAATTAT+TGG | + | chr5_2:7892527-7892546 | None:intergenic | 15.0% |
| !! | AAAAAAATAGAATATTCAAG+AGG | - | chr5_2:7892900-7892919 | Msa0754340:intron | 15.0% |
| !! | TAAAAAAAATGAAATCCAAA+AGG | + | chr5_2:7893003-7893022 | None:intergenic | 15.0% |
| !! | TCAAAAAAGATTGAAATTAA+AGG | - | chr5_2:7893026-7893045 | Msa0754340:intron | 15.0% |
| !! | AATAATAGTAGTAAATGATT+GGG | + | chr5_2:7893506-7893525 | None:intergenic | 15.0% |
| !! | AAATAATAGTAGTAAATGAT+TGG | + | chr5_2:7893507-7893526 | None:intergenic | 15.0% |
| !!! | TTAATCAATTTTTCTTGTTA+AGG | - | chr5_2:7893578-7893597 | Msa0754340:intron | 15.0% |
| !! | TAATATTAACATGATTCAAT+GGG | + | chr5_2:7894807-7894826 | None:intergenic | 15.0% |
| !! | TTAATATTAACATGATTCAA+TGG | + | chr5_2:7894808-7894827 | None:intergenic | 15.0% |
| !! | AACAAAATACCATTTCAATA+AGG | - | chr5_2:7891709-7891728 | Msa0754340:three_prime_UTR | 20.0% |
| !!! | ATCCTTCTATCTATTTTTTT+CGG | - | chr5_2:7891790-7891809 | Msa0754340:CDS | 20.0% |
| !! | ATTAGACAATGTTAAATTGT+CGG | - | chr5_2:7892067-7892086 | Msa0754340:intron | 20.0% |
| !! | TTTATTTGCATAGAAAACAA+AGG | + | chr5_2:7892366-7892385 | None:intergenic | 20.0% |
| !!! | ATTGTTTAGAAATTTTGCAT+TGG | - | chr5_2:7892491-7892510 | Msa0754340:intron | 20.0% |
| !! | TATATCTCCACATTATATAT+AGG | - | chr5_2:7892813-7892832 | Msa0754340:intron | 20.0% |
| !! | ATATCTCCACATTATATATA+GGG | - | chr5_2:7892814-7892833 | Msa0754340:intron | 20.0% |
| !! | TTGAATGAAACAAAAAAAAG+AGG | - | chr5_2:7892847-7892866 | Msa0754340:intron | 20.0% |
| !! | AATGCTAGTTATTTAGAAAA+TGG | + | chr5_2:7893090-7893109 | None:intergenic | 20.0% |
| !! | TTGATCAATAATGATATCAT+CGG | + | chr5_2:7893637-7893656 | None:intergenic | 20.0% |
| !! | AAAAAAAATGAAGGAGTAAA+TGG | + | chr5_2:7894040-7894059 | None:intergenic | 20.0% |
| !! | CTATGTATAACGAATTATAA+CGG | - | chr5_2:7894326-7894345 | Msa0754340:intron | 20.0% |
| !!! | TGTTAATTTTGATTGGTTTA+TGG | - | chr5_2:7894702-7894721 | Msa0754340:intron | 20.0% |
| !!! | GTTAATTTTGATTGGTTTAT+GGG | - | chr5_2:7894703-7894722 | Msa0754340:intron | 20.0% |
| !!! | TTTTTAGTAAGTTATTGCAA+AGG | + | chr5_2:7894772-7894791 | None:intergenic | 20.0% |
| !! | AATATTAACATGATTCAATG+GGG | + | chr5_2:7894806-7894825 | None:intergenic | 20.0% |
| !! | AAACTCCAAAAAAATTAACA+TGG | - | chr5_2:7894921-7894940 | Msa0754340:CDS | 20.0% |
| !! | ATATATATATACGTGTTTGT+TGG | - | chr5_2:7895014-7895033 | Msa0754340:intron | 20.0% |
| !! | AAGTAAACCATCAAATATAA+AGG | - | chr5_2:7895398-7895417 | Msa0754340:exon | 20.0% |
| !!! | TGATAATGGTATAATATATG+GGG | + | chr5_2:7895460-7895479 | None:intergenic | 20.0% |
| !!! | GTGATAATGGTATAATATAT+GGG | + | chr5_2:7895461-7895480 | None:intergenic | 20.0% |
| ! | TAAAATGCAATACAAGAGTA+AGG | + | chr5_2:7891596-7891615 | None:intergenic | 25.0% |
| !! | TATTGCATTTTATCTCAACA+TGG | - | chr5_2:7891604-7891623 | Msa0754340:three_prime_UTR | 25.0% |
| ! | AAATACCATTTCAATAAGGT+TGG | - | chr5_2:7891713-7891732 | Msa0754340:three_prime_UTR | 25.0% |
| ! | TTAATCCAACCTTATTGAAA+TGG | + | chr5_2:7891721-7891740 | None:intergenic | 25.0% |
| ! | AAATTTGAGGAAAAAATTGC+AGG | - | chr5_2:7891855-7891874 | Msa0754340:CDS | 25.0% |
| !!! | TTCATATACTCATTTTTCAG+TGG | + | chr5_2:7891899-7891918 | None:intergenic | 25.0% |
| ! | GTTAACTACATTAAGTGTAA+AGG | - | chr5_2:7892094-7892113 | Msa0754340:intron | 25.0% |
| ! | AAATAGAATATTCAAGAGGT+TGG | - | chr5_2:7892904-7892923 | Msa0754340:intron | 25.0% |
| ! | GCATTATAAACATAAACACA+AGG | - | chr5_2:7892973-7892992 | Msa0754340:intron | 25.0% |
| ! | TTATTTAGAAAATGGATACG+TGG | + | chr5_2:7893082-7893101 | None:intergenic | 25.0% |
| !! | ACAAAATAGAGGATTTTCAA+TGG | + | chr5_2:7893369-7893388 | None:intergenic | 25.0% |
| ! | TGTTACACAAAATAACCAAA+AGG | + | chr5_2:7893406-7893425 | None:intergenic | 25.0% |
| !!! | TTTGGTTATTTTGTGTAACA+AGG | - | chr5_2:7893406-7893425 | Msa0754340:intron | 25.0% |
| ! | GAACTAAAAAATTGTATTGG+AGG | + | chr5_2:7893939-7893958 | None:intergenic | 25.0% |
| ! | AGGGAACTAAAAAATTGTAT+TGG | + | chr5_2:7893942-7893961 | None:intergenic | 25.0% |
| ! | AAAAAGAGCAATTCATCTTA+TGG | - | chr5_2:7894208-7894227 | Msa0754340:intron | 25.0% |
| ! | GCACATGTATAATAAATCAT+TGG | - | chr5_2:7894266-7894285 | Msa0754340:intron | 25.0% |
| ! | TCAAAATGTTAACCTTGATT+TGG | - | chr5_2:7894292-7894311 | Msa0754340:intron | 25.0% |
| !! | CAAATGTGATGTTTTACTAT+AGG | - | chr5_2:7894526-7894545 | Msa0754340:intron | 25.0% |
| ! | CTATCCATTATTCTTCAAAA+GGG | + | chr5_2:7894565-7894584 | None:intergenic | 25.0% |
| ! | ACTATCCATTATTCTTCAAA+AGG | + | chr5_2:7894566-7894585 | None:intergenic | 25.0% |
| ! | TATTAATATTAAAGGCCACA+TGG | - | chr5_2:7894822-7894841 | Msa0754340:CDS | 25.0% |
| !!! | TCACACCATGTTAATTTTTT+TGG | + | chr5_2:7894929-7894948 | None:intergenic | 25.0% |
| ! | TTACAAACAAGCTCATTTAA+AGG | - | chr5_2:7895290-7895309 | Msa0754340:intron | 25.0% |
| !!! | CTTTATTAGTTTTAGCCTTT+TGG | - | chr5_2:7895315-7895334 | Msa0754340:CDS | 25.0% |
| ! | TCAAAGTTTGTATTGTATCT+AGG | - | chr5_2:7895372-7895391 | Msa0754340:CDS | 25.0% |
| ! | ATAATGGTATAATATATGGG+GGG | + | chr5_2:7895458-7895477 | None:intergenic | 25.0% |
| !! | GATAATGGTATAATATATGG+GGG | + | chr5_2:7895459-7895478 | None:intergenic | 25.0% |
| !!! | GGTGATAATGGTATAATATA+TGG | + | chr5_2:7895462-7895481 | None:intergenic | 25.0% |
| GACCGAAAAAAATAGATAGA+AGG | + | chr5_2:7891795-7891814 | None:intergenic | 30.0% | |
| ! | CTACGTGCAATTTTGTAATT+TGG | + | chr5_2:7891821-7891840 | None:intergenic | 30.0% |
| TGTAAAGGATAATAAGCTAG+AGG | - | chr5_2:7892109-7892128 | Msa0754340:intron | 30.0% | |
| CAACTAACAACAATCAACAA+GGG | + | chr5_2:7892246-7892265 | None:intergenic | 30.0% | |
| ACAACTAACAACAATCAACA+AGG | + | chr5_2:7892247-7892266 | None:intergenic | 30.0% | |
| ! | ATCTGACTTTTGTTAATGTG+AGG | - | chr5_2:7892386-7892405 | Msa0754340:intron | 30.0% |
| TGAGGTTCATACATAATCTA+TGG | - | chr5_2:7892404-7892423 | Msa0754340:intron | 30.0% | |
| TACATAATCTATGGTGTACT+TGG | - | chr5_2:7892413-7892432 | Msa0754340:intron | 30.0% | |
| !! | TTTAGAAATTTTGCATTGGC+TGG | - | chr5_2:7892495-7892514 | Msa0754340:intron | 30.0% |
| ATCTCACCCTATATATAATG+TGG | + | chr5_2:7892823-7892842 | None:intergenic | 30.0% | |
| ! | TAAACACAAGGAATACCTTT+TGG | - | chr5_2:7892985-7893004 | Msa0754340:intron | 30.0% |
| ATCAATAATGATATCATCGG+TGG | + | chr5_2:7893634-7893653 | None:intergenic | 30.0% | |
| !!! | TTTTTTAGTTCCCTCAAATG+AGG | - | chr5_2:7893948-7893967 | Msa0754340:intron | 30.0% |
| AAGGCTTGGAAAAAAAATGA+AGG | + | chr5_2:7894049-7894068 | None:intergenic | 30.0% | |
| AAATCCTTTGAATCATGTAG+AGG | - | chr5_2:7894105-7894124 | Msa0754340:intron | 30.0% | |
| TATACCTCTACATGATTCAA+AGG | + | chr5_2:7894112-7894131 | None:intergenic | 30.0% | |
| ! | TTTGAATCATGTAGAGGTAT+AGG | - | chr5_2:7894111-7894130 | Msa0754340:intron | 30.0% |
| ! | GATTTGATTTCTCCAAATCA+AGG | + | chr5_2:7894307-7894326 | None:intergenic | 30.0% |
| AACCTCTCAAAAAGATTCTA+CGG | - | chr5_2:7894454-7894473 | Msa0754340:intron | 30.0% | |
| !! | GATTCCCTTTTGAAGAATAA+TGG | - | chr5_2:7894558-7894577 | Msa0754340:intron | 30.0% |
| !! | ACTCGTGTGTTAATTTTGAT+TGG | - | chr5_2:7894695-7894714 | Msa0754340:intron | 30.0% |
| ! | CAATTTGAAATGAAACCATG+TGG | + | chr5_2:7894840-7894859 | None:intergenic | 30.0% |
| ATTCTCATACAACATCCAAA+AGG | + | chr5_2:7895333-7895352 | None:intergenic | 30.0% | |
| GCATGTACCTTTATATTTGA+TGG | + | chr5_2:7895408-7895427 | None:intergenic | 30.0% | |
| TTGAGTAGTAATGGTGATAA+TGG | + | chr5_2:7895474-7895493 | None:intergenic | 30.0% | |
| TTGTATGAATGTCTAGGTTC+AGG | + | chr5_2:7891565-7891584 | None:intergenic | 35.0% | |
| CAAGGTTTGTATGAATGTCT+AGG | + | chr5_2:7891571-7891590 | None:intergenic | 35.0% | |
| !!! | GTTGTGTCTTTTTCAGTAAG+AGG | + | chr5_2:7891692-7891711 | None:intergenic | 35.0% |
| ! | ACTTTGAAGAAAGTGATCGT+AGG | - | chr5_2:7892203-7892222 | Msa0754340:intron | 35.0% |
| GCAAGGGACAAAAAATTATG+GGG | + | chr5_2:7892344-7892363 | None:intergenic | 35.0% | |
| GGCAAGGGACAAAAAATTAT+GGG | + | chr5_2:7892345-7892364 | None:intergenic | 35.0% | |
| AGGCAAGGGACAAAAAATTA+TGG | + | chr5_2:7892346-7892365 | None:intergenic | 35.0% | |
| TGCATAGAAAACAAAGGCAA+GGG | + | chr5_2:7892360-7892379 | None:intergenic | 35.0% | |
| TTGCATAGAAAACAAAGGCA+AGG | + | chr5_2:7892361-7892380 | None:intergenic | 35.0% | |
| TGAGTCGATATTCAATTGCA+GGG | - | chr5_2:7892595-7892614 | Msa0754340:intron | 35.0% | |
| TATTACCTTTGCTGCAAGAA+GGG | + | chr5_2:7892646-7892665 | None:intergenic | 35.0% | |
| ATATTACCTTTGCTGCAAGA+AGG | + | chr5_2:7892647-7892666 | None:intergenic | 35.0% | |
| !! | GAATATTCAAGAGGTTGGTA+AGG | - | chr5_2:7892909-7892928 | Msa0754340:intron | 35.0% |
| !!! | AGTGAGCTGACTTGAAATTT+TGG | - | chr5_2:7892951-7892970 | Msa0754340:intron | 35.0% |
| ! | ATTGTGAAACAGTTTTACCC+CGG | - | chr5_2:7893337-7893356 | Msa0754340:intron | 35.0% |
| CAAAATAACCAAAAGGAGTG+AGG | + | chr5_2:7893399-7893418 | None:intergenic | 35.0% | |
| ATCATCGGTGGATCAAATTT+GGG | + | chr5_2:7893622-7893641 | None:intergenic | 35.0% | |
| TATCATCGGTGGATCAAATT+TGG | + | chr5_2:7893623-7893642 | None:intergenic | 35.0% | |
| AAGGGCAAAAGTTTCATTCT+AGG | + | chr5_2:7893703-7893722 | None:intergenic | 35.0% | |
| ! | GAATGAAACTTTTGCCCTTA+AGG | - | chr5_2:7893704-7893723 | Msa0754340:intron | 35.0% |
| ACTCTCAAACAAAGCCTTAA+GGG | + | chr5_2:7893721-7893740 | None:intergenic | 35.0% | |
| AACTCTCAAACAAAGCCTTA+AGG | + | chr5_2:7893722-7893741 | None:intergenic | 35.0% | |
| !! | GCTTTGTTTGAGAGTTTGAA+GGG | - | chr5_2:7893726-7893745 | Msa0754340:intron | 35.0% |
| ! | ATTGGAGGAGAGTTTTTGAA+GGG | + | chr5_2:7893924-7893943 | None:intergenic | 35.0% |
| ! | TATTGGAGGAGAGTTTTTGA+AGG | + | chr5_2:7893925-7893944 | None:intergenic | 35.0% |
| ATAAAACCCTCCTCATTTGA+GGG | + | chr5_2:7893961-7893980 | None:intergenic | 35.0% | |
| TATAAAACCCTCCTCATTTG+AGG | + | chr5_2:7893962-7893981 | None:intergenic | 35.0% | |
| AGAAATAGAGGACATTTGGA+AGG | + | chr5_2:7894016-7894035 | None:intergenic | 35.0% | |
| TGGAAGAAATAGAGGACATT+TGG | + | chr5_2:7894020-7894039 | None:intergenic | 35.0% | |
| GGAGTAAATGGAAGAAATAG+AGG | + | chr5_2:7894028-7894047 | None:intergenic | 35.0% | |
| !! | TTAAGCTTTGTTTGCGAGTT+TGG | + | chr5_2:7894082-7894101 | None:intergenic | 35.0% |
| ! | AATCATGTAGAGGTATAGGT+AGG | - | chr5_2:7894115-7894134 | Msa0754340:intron | 35.0% |
| TAAACAAACCCATGAAGCAT+AGG | + | chr5_2:7894429-7894448 | None:intergenic | 35.0% | |
| ACCTCTCAAAAAGATTCTAC+GGG | - | chr5_2:7894455-7894474 | Msa0754340:intron | 35.0% | |
| !!! | TTTTTGGAGTTTCCTTACGT+CGG | + | chr5_2:7894913-7894932 | None:intergenic | 35.0% |
| TGATAGAAAACGATGAGACA+TGG | - | chr5_2:7895056-7895075 | Msa0754340:intron | 35.0% | |
| GCACAATGTTGAAGAAACAA+TGG | - | chr5_2:7895128-7895147 | Msa0754340:intron | 35.0% | |
| ! | CATGGCTTTTCATTGTGAAT+AGG | + | chr5_2:7895219-7895238 | None:intergenic | 35.0% |
| ! | ATTTTCAGTACAGTGAGTCA+TGG | + | chr5_2:7895237-7895256 | None:intergenic | 35.0% |
| CAATACAAGAGTAAGGCTCA+AGG | + | chr5_2:7891589-7891608 | None:intergenic | 40.0% | |
| !! | TTTTTCAGTAAGAGGACGAG+GGG | + | chr5_2:7891684-7891703 | None:intergenic | 40.0% |
| !!! | CTTTTTCAGTAAGAGGACGA+GGG | + | chr5_2:7891685-7891704 | None:intergenic | 40.0% |
| !!! | TCTTTTTCAGTAAGAGGACG+AGG | + | chr5_2:7891686-7891705 | None:intergenic | 40.0% |
| GTGAGTCGATATTCAATTGC+AGG | - | chr5_2:7892594-7892613 | Msa0754340:intron | 40.0% | |
| ! | TTGTGAAACAGTTTTACCCC+GGG | - | chr5_2:7893338-7893357 | Msa0754340:intron | 40.0% |
| ! | ATTTTCAATGGATGTTCCCG+GGG | + | chr5_2:7893357-7893376 | None:intergenic | 40.0% |
| ! | GATTTTCAATGGATGTTCCC+GGG | + | chr5_2:7893358-7893377 | None:intergenic | 40.0% |
| ! | GGATTTTCAATGGATGTTCC+CGG | + | chr5_2:7893359-7893378 | None:intergenic | 40.0% |
| GAGGTAGTGTGACAAAATAG+AGG | + | chr5_2:7893380-7893399 | None:intergenic | 40.0% | |
| !! | GGCTTTGTTTGAGAGTTTGA+AGG | - | chr5_2:7893725-7893744 | Msa0754340:intron | 40.0% |
| TGTTTGAGAGTTTGAAGGGA+AGG | - | chr5_2:7893730-7893749 | Msa0754340:intron | 40.0% | |
| GTTTGAGAGTTTGAAGGGAA+GGG | - | chr5_2:7893731-7893750 | Msa0754340:intron | 40.0% | |
| TTTGAGAGTTTGAAGGGAAG+GGG | - | chr5_2:7893732-7893751 | Msa0754340:intron | 40.0% | |
| ! | ACTTTGGGGGAGAGAAATAT+AGG | - | chr5_2:7893763-7893782 | Msa0754340:intron | 40.0% |
| ! | TTTAGTTCCCTCAAATGAGG+AGG | - | chr5_2:7893951-7893970 | Msa0754340:intron | 40.0% |
| TTAGTTCCCTCAAATGAGGA+GGG | - | chr5_2:7893952-7893971 | Msa0754340:intron | 40.0% | |
| ! | ATGTAGAGGTATAGGTAGGT+AGG | - | chr5_2:7894119-7894138 | Msa0754340:intron | 40.0% |
| !! | ACCCGTAGAATCTTTTTGAG+AGG | + | chr5_2:7894459-7894478 | None:intergenic | 40.0% |
| AAACACCAATGAGAATGCAG+AGG | - | chr5_2:7895155-7895174 | Msa0754340:intron | 40.0% | |
| TATGTCCTCTGCATTCTCAT+TGG | + | chr5_2:7895163-7895182 | None:intergenic | 40.0% | |
| AGGATTATGCACAACCTCAT+CGG | - | chr5_2:7895187-7895206 | Msa0754340:intron | 40.0% | |
| AGGTACATGCAATACTGCAT+TGG | - | chr5_2:7895418-7895437 | Msa0754340:five_prime_UTR | 40.0% | |
| ATGCATGCAAAGAACCACAG+AGG | + | chr5_2:7891658-7891677 | None:intergenic | 45.0% | |
| ! | GTGATTTTCTGTTGCAGAGC+TGG | + | chr5_2:7892140-7892159 | None:intergenic | 45.0% |
| TGCAGGGTCAACTTTCCAAA+CGG | - | chr5_2:7892611-7892630 | Msa0754340:intron | 45.0% | |
| ! | TCACACTACCTCACTCCTTT+TGG | - | chr5_2:7893388-7893407 | Msa0754340:intron | 45.0% |
| GAAGGGGAAGGAAAGACTTT+GGG | - | chr5_2:7893748-7893767 | Msa0754340:intron | 45.0% | |
| AAGGGGAAGGAAAGACTTTG+GGG | - | chr5_2:7893749-7893768 | Msa0754340:intron | 45.0% | |
| CATTTGGAAGGAGTGGCTTT+GGG | + | chr5_2:7894004-7894023 | None:intergenic | 45.0% | |
| ACATTTGGAAGGAGTGGCTT+TGG | + | chr5_2:7894005-7894024 | None:intergenic | 45.0% | |
| TAGAGGACATTTGGAAGGAG+TGG | + | chr5_2:7894011-7894030 | None:intergenic | 45.0% | |
| TTGGAGGGAAAAGAAAGGCT+TGG | + | chr5_2:7894063-7894082 | None:intergenic | 45.0% | |
| CGAGTTTGGAGGGAAAAGAA+AGG | + | chr5_2:7894068-7894087 | None:intergenic | 45.0% | |
| !! | GCTTTGTTTGCGAGTTTGGA+GGG | + | chr5_2:7894078-7894097 | None:intergenic | 45.0% |
| !! | AGCTTTGTTTGCGAGTTTGG+AGG | + | chr5_2:7894079-7894098 | None:intergenic | 45.0% |
| TGCCTAAAGCCTATGCTTCA+TGG | - | chr5_2:7894417-7894436 | Msa0754340:intron | 45.0% | |
| GCCTAAAGCCTATGCTTCAT+GGG | - | chr5_2:7894418-7894437 | Msa0754340:intron | 45.0% | |
| ACCCATGAAGCATAGGCTTT+AGG | + | chr5_2:7894422-7894441 | None:intergenic | 45.0% | |
| CGTGGCTCTTGGTTTACAAT+TGG | + | chr5_2:7894875-7894894 | None:intergenic | 45.0% | |
| GTAAAACTGAACGTGGCTCT+TGG | + | chr5_2:7894886-7894905 | None:intergenic | 45.0% | |
| !! | AGTTTTACTGTGCCGACGTA+AGG | - | chr5_2:7894898-7894917 | Msa0754340:CDS | 45.0% |
| TCTTCAACATTGTGCTGAGC+TGG | + | chr5_2:7895123-7895142 | None:intergenic | 45.0% | |
| TGAATAGGTGCTTTCCGATG+AGG | + | chr5_2:7895204-7895223 | None:intergenic | 45.0% | |
| !!! | TACTATTTTTATTATTTTTT+TGG | - | chr5_2:7892273-7892292 | Msa0754340:intron | 5.0% |
| !!! | TATTATTATTTCTTTTTTTT+TGG | + | chr5_2:7892573-7892592 | None:intergenic | 5.0% |
| AGGATGAGGAGCAGAAGAAG+AGG | + | chr5_2:7891638-7891657 | None:intergenic | 50.0% | |
| GCAAAGAACCACAGAGGATG+AGG | + | chr5_2:7891652-7891671 | None:intergenic | 50.0% | |
| GCAGGGTCAACTTTCCAAAC+GGG | - | chr5_2:7892612-7892631 | Msa0754340:intron | 50.0% | |
| ACCTTTGCTGCAAGAAGGGA+TGG | + | chr5_2:7892642-7892661 | None:intergenic | 50.0% | |
| AGAGTTTGAAGGGAAGGGGA+AGG | - | chr5_2:7893736-7893755 | Msa0754340:intron | 50.0% | |
| GGAAGGGGAAGGAAAGACTT+TGG | - | chr5_2:7893747-7893766 | Msa0754340:intron | 50.0% | |
| AGGGGAAGGAAAGACTTTGG+GGG | - | chr5_2:7893750-7893769 | Msa0754340:intron | 50.0% | |
| CGGCACAGTAAAACTGAACG+TGG | + | chr5_2:7894893-7894912 | None:intergenic | 50.0% | |
| ACGATGAGACATGGTTGTGC+AGG | - | chr5_2:7895065-7895084 | Msa0754340:intron | 50.0% | |
| ACATGGTTGTGCAGGCTGAA+AGG | - | chr5_2:7895073-7895092 | Msa0754340:intron | 50.0% | |
| CATGGTTGTGCAGGCTGAAA+GGG | - | chr5_2:7895074-7895093 | Msa0754340:intron | 50.0% | |
| ATGGTTGTGCAGGCTGAAAG+GGG | - | chr5_2:7895075-7895094 | Msa0754340:intron | 50.0% | |
| GGACATGCAAGGTCAATGCT+GGG | - | chr5_2:7895096-7895115 | Msa0754340:intron | 50.0% | |
| GAATGCAGAGGACATAGTCG+AGG | - | chr5_2:7895167-7895186 | Msa0754340:intron | 50.0% | |
| CTTCTGCTCCTCATCCTCTG+TGG | - | chr5_2:7891641-7891660 | Msa0754340:three_prime_UTR | 55.0% | |
| GCCATCCCTTCTTGCAGCAA+AGG | - | chr5_2:7892638-7892657 | Msa0754340:intron | 55.0% | |
| AGGCTGAAAGGGGACATGCA+AGG | - | chr5_2:7895085-7895104 | Msa0754340:intron | 55.0% | |
| GGGACATGCAAGGTCAATGC+TGG | - | chr5_2:7895095-7895114 | Msa0754340:intron | 55.0% | |
| GAAGGGATGGCGTACCCGTT+TGG | + | chr5_2:7892629-7892648 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 7891535 | 7895493 | 7891535 | ID=Msa0754340;Name=Msa0754340 |
| chr5_2 | mRNA | 7891535 | 7895493 | 7891535 | ID=Msa0754340-mRNA-1;Parent=Msa0754340;Name=Msa0754340-mRNA-1;_AED=0.02;_eAED=0.02;_QI=88|1|1|1|1|1|4|254|154 |
| chr5_2 | exon | 7891535 | 7891941 | 7891535 | ID=Msa0754340-mRNA-1:exon:3627;Parent=Msa0754340-mRNA-1 |
| chr5_2 | exon | 7894369 | 7894412 | 7894369 | ID=Msa0754340-mRNA-1:exon:3626;Parent=Msa0754340-mRNA-1 |
| chr5_2 | exon | 7894804 | 7894963 | 7894804 | ID=Msa0754340-mRNA-1:exon:3625;Parent=Msa0754340-mRNA-1 |
| chr5_2 | exon | 7895298 | 7895493 | 7895298 | ID=Msa0754340-mRNA-1:exon:3624;Parent=Msa0754340-mRNA-1 |
| chr5_2 | five_prime_UTR | 7895406 | 7895493 | 7895406 | ID=Msa0754340-mRNA-1:five_prime_utr;Parent=Msa0754340-mRNA-1 |
| chr5_2 | CDS | 7895298 | 7895405 | 7895298 | ID=Msa0754340-mRNA-1:cds;Parent=Msa0754340-mRNA-1 |
| chr5_2 | CDS | 7894804 | 7894963 | 7894804 | ID=Msa0754340-mRNA-1:cds;Parent=Msa0754340-mRNA-1 |
| chr5_2 | CDS | 7894369 | 7894412 | 7894369 | ID=Msa0754340-mRNA-1:cds;Parent=Msa0754340-mRNA-1 |
| chr5_2 | CDS | 7891789 | 7891941 | 7891789 | ID=Msa0754340-mRNA-1:cds;Parent=Msa0754340-mRNA-1 |
| chr5_2 | three_prime_UTR | 7891535 | 7891788 | 7891535 | ID=Msa0754340-mRNA-1:three_prime_utr;Parent=Msa0754340-mRNA-1 |
| Gene Sequence |
| Protein sequence |
