AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1425050

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1425050 MtrunA17_Chr7g0276151 96.345 766 27 1 22 787 1 765 0.0 1527
Msa1425050 MtrunA17_Chr8g0345971 64.928 767 255 8 22 780 1 761 0.0 1008
Msa1425050 MtrunA17_Chr1g0189251 65.445 764 251 10 22 780 1 756 0.0 1005
Msa1425050 MtrunA17_Chr8g0345991 63.424 771 263 12 22 784 1 760 0.0 954
Msa1425050 MtrunA17_Chr8g0345981 62.872 773 268 12 22 784 1 764 0.0 941
Msa1425050 MtrunA17_Chr2g0303881 65.176 738 235 12 59 784 5 732 0.0 915
Msa1425050 MtrunA17_Chr8g0345961 60.897 780 271 13 22 784 1 763 0.0 887
Msa1425050 MtrunA17_Chr7g0248871 49.868 760 362 10 32 777 9 763 0.0 736
Msa1425050 MtrunA17_Chr1g0189561 50.394 762 351 14 29 777 13 760 0.0 719
Msa1425050 MtrunA17_Chr7g0248861 49.164 598 288 9 50 633 27 622 0.0 567
Msa1425050 MtrunA17_Chr7g0248861 60.256 234 90 3 155 386 627 859 1.25e-82 281
Msa1425050 MtrunA17_Chr2g0300751 39.589 778 423 15 32 775 6 770 0.0 551
Msa1425050 MtrunA17_Chr4g0037221 41.415 763 387 19 53 780 33 770 1.34e-179 534
Msa1425050 MtrunA17_Chr1g0204321 39.309 781 427 15 31 780 15 779 5.02e-179 533
Msa1425050 MtrunA17_Chr7g0262161 40.551 762 400 17 48 778 22 761 2.17e-178 530
Msa1425050 MtrunA17_Chr4g0070391 39.797 789 406 19 22 778 1 752 2.43e-177 527
Msa1425050 MtrunA17_Chr4g0053781 40.234 768 408 16 37 778 13 755 2.03e-176 525
Msa1425050 MtrunA17_Chr5g0401511 40.788 787 406 19 22 778 5 761 1.05e-174 521
Msa1425050 MtrunA17_Chr1g0152771 40.103 773 420 13 32 778 8 763 3.59e-172 514
Msa1425050 MtrunA17_Chr4g0020651 40.702 769 409 15 32 775 8 754 1.59e-166 499
Msa1425050 MtrunA17_Chr4g0057061 39.520 792 391 26 29 777 28 774 1.57e-164 495
Msa1425050 MtrunA17_Chr8g0344331 39.764 762 397 26 53 777 38 774 6.94e-160 483
Msa1425050 MtrunA17_Chr8g0344971 37.848 790 416 19 29 778 6 760 7.94e-159 480
Msa1425050 MtrunA17_Chr3g0134621 40.533 750 374 18 53 778 35 736 1.68e-156 473
Msa1425050 MtrunA17_Chr7g0246461 36.985 776 416 16 34 778 7 740 1.75e-152 463
Msa1425050 MtrunA17_Chr5g0398241 39.130 782 397 20 29 777 18 753 1.67e-148 453
Msa1425050 MtrunA17_Chr5g0398331 38.320 762 395 20 45 777 35 750 2.45e-148 452
Msa1425050 MtrunA17_Chr5g0398401 38.875 782 399 20 29 777 18 753 6.26e-147 449
Msa1425050 MtrunA17_Chr8g0369891 37.135 719 385 17 90 777 70 752 1.59e-146 448
Msa1425050 MtrunA17_Chr3g0120521 38.042 715 389 17 101 780 77 772 4.70e-146 447
Msa1425050 MtrunA17_Chr5g0407701 37.274 719 400 17 90 784 65 756 5.54e-143 439
Msa1425050 MtrunA17_Chr4g0076611 38.678 711 386 16 99 777 1 693 1.55e-142 436
Msa1425050 MtrunA17_Chr5g0398351 39.130 782 397 20 29 777 769 1504 1.25e-141 454
Msa1425050 MtrunA17_Chr5g0398351 38.714 762 389 21 47 777 19 733 2.82e-135 436
Msa1425050 MtrunA17_Chr2g0285121 39.224 747 357 23 99 778 67 783 1.55e-141 436
Msa1425050 MtrunA17_Chr4g0026641 37.323 777 428 21 31 777 6 753 9.27e-141 433
Msa1425050 MtrunA17_Chr8g0377961 36.976 787 426 20 33 783 28 780 1.37e-139 431
Msa1425050 MtrunA17_Chr5g0398311 37.056 788 408 21 30 777 7 746 3.89e-139 429
Msa1425050 MtrunA17_Chr2g0285111 38.649 740 366 21 101 778 73 786 4.25e-139 429
Msa1425050 MtrunA17_Chr7g0250371 36.742 792 427 25 34 777 19 784 4.80e-136 422
Msa1425050 MtrunA17_Chr4g0057471 38.687 716 379 23 101 777 14 708 8.34e-136 419
Msa1425050 MtrunA17_Chr4g0057531 38.974 721 381 19 101 781 79 780 5.16e-135 419
Msa1425050 MtrunA17_Chr4g0057461 40.729 631 329 17 174 771 3 621 1.14e-133 410
Msa1425050 MtrunA17_Chr8g0354771 35.954 776 434 19 40 777 13 763 6.61e-133 413
Msa1425050 MtrunA17_Chr7g0250391 36.160 802 443 25 23 777 3 782 7.36e-133 413
Msa1425050 MtrunA17_Chr7g0250411 36.115 803 430 26 34 784 19 790 6.69e-131 409
Msa1425050 MtrunA17_Chr4g0057481 39.583 672 353 21 141 777 36 689 4.76e-130 403
Msa1425050 MtrunA17_Chr7g0227991 34.197 772 432 22 29 777 15 733 4.85e-130 404
Msa1425050 MtrunA17_Chr3g0136151 36.981 722 390 19 99 778 64 762 2.67e-128 400
Msa1425050 MtrunA17_Chr4g0057491 39.403 637 335 16 174 777 3 621 3.50e-128 396
Msa1425050 MtrunA17_Chr7g0250331 37.257 773 383 24 85 777 56 806 3.77e-128 402
Msa1425050 MtrunA17_Chr1g0146251 34.596 792 427 24 26 781 2 738 8.59e-128 399
Msa1425050 MtrunA17_Chr5g0423261 38.959 634 344 16 173 777 2 621 1.19e-127 395
Msa1425050 MtrunA17_Chr1g0170081 34.987 786 426 25 28 782 4 735 4.40e-127 397
Msa1425050 MtrunA17_Chr6g0470881 35.309 776 424 25 30 780 10 732 5.52e-127 396
Msa1425050 MtrunA17_Chr3g0143251 35.435 793 434 24 30 780 11 767 1.31e-126 396
Msa1425050 MtrunA17_Chr8g0351011 37.021 705 386 19 99 779 83 753 1.79e-126 395
Msa1425050 MtrunA17_Chr1g0146271 33.671 790 433 23 27 781 3 736 7.18e-126 394
Msa1425050 MtrunA17_Chr7g0266051 36.746 713 390 22 92 777 27 705 8.15e-125 390
Msa1425050 MtrunA17_Chr8g0334521 34.282 773 434 23 30 781 18 737 3.73e-122 384
Msa1425050 MtrunA17_Chr6g0470851 33.892 776 435 23 29 781 13 733 8.79e-122 383
Msa1425050 MtrunA17_Chr8g0354741 37.834 637 345 14 168 777 21 633 4.34e-121 378
Msa1425050 MtrunA17_Chr7g0246451 35.319 722 403 21 83 777 61 745 3.77e-120 379
Msa1425050 MtrunA17_Chr4g0057511 39.075 627 341 18 178 777 3 615 2.15e-119 373
Msa1425050 MtrunA17_Chr3g0079971 34.866 783 432 21 27 781 3 735 5.44e-119 375
Msa1425050 MtrunA17_Chr8g0334491 35.359 724 395 21 80 780 57 730 5.64e-117 370
Msa1425050 MtrunA17_Chr5g0439271 37.886 615 313 17 211 777 8 601 1.39e-107 342
Msa1425050 MtrunA17_Chr8g0376841 37.523 541 296 13 83 598 62 585 5.10e-97 313
Msa1425050 MtrunA17_Chr2g0298601 32.749 742 411 28 101 775 91 811 5.76e-97 320
Msa1425050 MtrunA17_Chr4g0075331 30.973 678 392 17 101 717 16 678 2.49e-84 284
Msa1425050 MtrunA17_Chr2g0302951 29.615 753 438 21 56 741 76 803 8.44e-81 276
Msa1425050 MtrunA17_Chr8g0380961 30.835 707 408 23 101 741 119 810 3.57e-80 275
Msa1425050 MtrunA17_Chr2g0301011 34.082 534 274 14 141 663 17 483 8.36e-79 262
Msa1425050 MtrunA17_Chr5g0447171 35.484 527 246 17 320 777 6 507 1.06e-74 251
Msa1425050 MtrunA17_Chr7g0250481 46.341 287 142 7 494 777 520 797 2.33e-63 227
Msa1425050 MtrunA17_Chr7g0250481 36.827 353 203 8 53 390 32 379 8.68e-59 214
Msa1425050 MtrunA17_Chr7g0261701 42.140 299 161 5 479 777 3 289 2.11e-62 211
Msa1425050 MtrunA17_Chr7g0250441 43.686 293 147 8 498 784 9 289 7.14e-61 208
Msa1425050 MtrunA17_Chr4g0035881 37.640 356 176 9 247 596 4 319 2.17e-59 204
Msa1425050 MtrunA17_Chr7g0250461 36.000 375 209 11 34 390 19 380 6.95e-58 205
Msa1425050 MtrunA17_Chr6g0480721 40.924 303 157 8 485 783 321 605 1.97e-57 207
Msa1425050 MtrunA17_Chr6g0480721 37.500 304 178 4 103 403 9 303 4.43e-53 195
Msa1425050 MtrunA17_Chr3g0143241 34.353 425 226 12 30 424 11 412 2.30e-57 205
Msa1425050 MtrunA17_Chr4g0071871 38.436 307 174 7 98 391 88 392 5.89e-57 209
Msa1425050 MtrunA17_Chr4g0071871 35.932 295 160 9 500 780 537 816 2.75e-37 150
Msa1425050 MtrunA17_Chr8g0346361 37.621 311 175 6 475 781 205 500 1.22e-55 199
Msa1425050 MtrunA17_Chr8g0346361 41.237 194 97 4 190 381 7 185 2.75e-39 152
Msa1425050 MtrunA17_Chr4g0026651 39.667 300 146 7 114 380 2 299 8.61e-55 191
Msa1425050 MtrunA17_Chr7g0261691 44.915 236 119 4 162 389 5 237 3.12e-54 191
Msa1425050 MtrunA17_Chr5g0418921 64.964 137 47 1 490 626 1 136 7.68e-53 181
Msa1425050 MtrunA17_Chr4g0026661 39.231 260 143 5 521 777 12 259 1.76e-51 180
Msa1425050 MtrunA17_Chr3g0097061 38.214 280 141 7 165 427 39 303 2.28e-51 186
Msa1425050 MtrunA17_Chr3g0097061 44.000 125 58 2 538 662 318 430 2.06e-23 103
Msa1425050 MtrunA17_Chr3g0105451 38.225 293 150 8 495 778 9 279 8.23e-49 174
Msa1425050 MtrunA17_Chr2g0312861 39.130 276 135 8 521 785 1 254 1.26e-45 166
Msa1425050 MtrunA17_Chr8g0346961 64.957 117 40 1 592 708 1 116 1.03e-43 153
Msa1425050 MtrunA17_Chr2g0301031 37.643 263 141 7 521 777 1 246 3.98e-41 151
Msa1425050 MtrunA17_Chr3g0105461 34.132 334 169 7 58 380 24 317 2.81e-40 152
Msa1425050 MtrunA17_Chr3g0103061 39.896 193 106 2 99 285 72 260 1.08e-38 144
Msa1425050 MtrunA17_Chr2g0301911 32.295 353 196 10 190 524 33 360 2.00e-38 147
Msa1425050 MtrunA17_Chr2g0312841 38.542 192 100 5 190 378 12 188 2.08e-38 141
Msa1425050 MtrunA17_Chr7g0248851 48.993 149 71 2 631 777 1 146 9.33e-38 138
Msa1425050 MtrunA17_Chr2g0301921 37.727 220 117 5 563 777 1 205 1.71e-35 134
Msa1425050 MtrunA17_Chr4g0071191 39.234 209 108 7 502 706 57 250 4.61e-33 128
Msa1425050 MtrunA17_Chr3g0103071 34.643 280 150 9 295 549 1 272 1.77e-32 127
Msa1425050 MtrunA17_Chr5g0436021 39.634 164 88 3 212 372 31 186 1.72e-29 115
Msa1425050 MtrunA17_Chr2g0301021 28.533 375 155 14 28 389 4 278 2.49e-28 117
Msa1425050 MtrunA17_Chr3g0142981 40.351 171 66 4 215 381 32 170 6.51e-27 108
Msa1425050 MtrunA17_Chr5g0436031 37.349 166 96 4 615 777 20 180 2.67e-26 107
Msa1425050 MtrunA17_Chr8g0376851 36.527 167 97 5 618 779 11 173 2.03e-24 100
Msa1425050 MtrunA17_Chr3g0103081 39.597 149 81 5 631 777 1 142 6.47e-22 92.8
Msa1425050 MtrunA17_Chr3g0142971 53.488 86 38 2 505 590 2 85 3.59e-18 80.1
Msa1425050 MtrunA17_Chr5g0398341 47.917 96 48 1 563 658 1 94 1.04e-17 79.0
Msa1425050 MtrunA17_Chr3g0143231 52.273 88 38 3 508 594 5 89 2.64e-17 77.8
Msa1425050 MtrunA17_Chr3g0143221 31.694 183 93 7 604 778 5 163 7.64e-14 70.1
Msa1425050 MtrunA17_Chr4g0035871 35.821 134 78 2 86 211 17 150 1.37e-13 68.9
Msa1425050 MtrunA17_Chr3g0142961 35.156 128 70 5 615 734 13 135 1.35e-12 65.9
Msa1425050 MtrunA17_Chr3g0143021 35.294 102 66 0 99 200 7 108 1.67e-12 64.7
Msa1425050 MtrunA17_Chr5g0439281 29.187 209 119 7 22 213 1 197 2.50e-12 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1425050 AT5G67090.1 45.632 767 361 13 35 783 7 735 0.0 643
Msa1425050 AT2G05920.1 41.811 751 382 17 53 778 30 750 0.0 553
Msa1425050 AT5G67360.1 41.548 775 398 19 29 778 11 755 0.0 545
Msa1425050 AT1G04110.1 39.721 788 414 19 30 778 6 771 6.19e-178 530
Msa1425050 AT4G34980.1 39.847 783 412 19 30 782 10 763 5.87e-176 525
Msa1425050 AT5G51750.1 38.175 778 442 15 29 780 13 777 2.01e-170 511
Msa1425050 AT3G14240.1 39.370 762 407 17 53 778 28 770 8.99e-167 501
Msa1425050 AT3G14067.1 37.724 782 430 20 30 777 9 767 1.61e-165 498
Msa1425050 AT1G01900.1 40.690 725 398 13 77 778 57 772 1.58e-162 490
Msa1425050 AT2G04160.1 40.251 718 364 19 101 777 77 770 1.50e-152 464
Msa1425050 AT1G20160.2 38.095 735 390 22 91 783 17 728 2.00e-142 437
Msa1425050 AT1G20160.1 36.546 799 420 25 31 783 10 767 4.88e-142 437
Msa1425050 AT5G59810.1 37.624 707 392 15 101 777 87 774 4.60e-135 419
Msa1425050 AT5G45650.2 36.080 801 413 25 46 778 20 789 8.70e-135 419
Msa1425050 AT5G45650.1 36.080 801 413 25 46 778 20 789 8.70e-135 419
Msa1425050 AT4G10510.3 35.589 798 439 21 29 786 9 771 3.19e-132 412
Msa1425050 AT4G10550.1 35.995 789 434 21 29 777 9 766 3.77e-132 412
Msa1425050 AT4G10510.2 36.777 726 395 18 99 786 1 700 7.93e-132 409
Msa1425050 AT4G10510.4 36.777 726 395 18 99 786 16 715 1.61e-131 408
Msa1425050 AT4G10510.1 36.777 726 395 18 99 786 60 759 3.06e-131 409
Msa1425050 AT4G10550.4 37.212 739 396 19 77 777 2 710 3.86e-130 405
Msa1425050 AT4G10550.2 37.212 739 396 19 77 777 2 710 3.86e-130 405
Msa1425050 AT4G10550.3 37.212 739 396 19 77 777 74 782 1.42e-129 405
Msa1425050 AT1G32940.4 37.622 715 391 17 99 777 16 711 1.63e-127 398
Msa1425050 AT1G32940.2 37.622 715 391 17 99 777 16 711 1.63e-127 398
Msa1425050 AT5G58830.1 36.232 759 414 23 29 777 7 705 2.16e-127 397
Msa1425050 AT1G32940.1 37.193 734 400 18 86 777 48 762 3.81e-127 398
Msa1425050 AT1G32960.1 37.099 717 396 18 99 779 70 767 4.98e-126 395
Msa1425050 AT5G59190.1 36.352 751 391 23 59 781 1 692 5.74e-126 393
Msa1425050 AT4G26330.2 36.975 714 402 20 99 777 21 721 1.02e-125 393
Msa1425050 AT5G59100.1 33.955 751 430 19 53 781 35 741 1.04e-125 394
Msa1425050 AT5G58840.1 34.987 766 428 19 22 777 1 706 1.16e-125 392
Msa1425050 AT4G10520.1 34.980 769 449 19 29 777 7 744 1.28e-125 394
Msa1425050 AT1G20150.1 34.496 774 424 20 64 779 24 772 2.11e-125 394
Msa1425050 AT3G46840.1 34.860 786 424 22 29 781 8 738 5.80e-125 392
Msa1425050 AT4G10540.1 35.734 722 399 16 97 777 66 763 1.27e-124 392
Msa1425050 AT3G46850.1 35.142 774 431 22 29 777 7 734 1.62e-124 390
Msa1425050 AT1G66220.1 35.552 706 396 15 99 779 75 746 2.53e-122 385
Msa1425050 AT5G59090.2 33.730 756 421 17 45 777 25 723 2.67e-122 384
Msa1425050 AT5G03620.1 36.908 718 379 17 101 777 74 758 3.06e-122 385
Msa1425050 AT5G59090.1 33.598 756 427 16 45 777 25 728 6.32e-122 384
Msa1425050 AT4G26330.1 36.264 728 402 21 99 777 21 735 7.03e-122 384
Msa1425050 AT5G59120.1 34.859 743 396 19 73 777 35 727 7.90e-122 383
Msa1425050 AT1G66210.1 34.326 772 448 18 30 779 18 752 1.54e-120 380
Msa1425050 AT5G59090.3 33.598 756 425 17 45 777 25 726 9.06e-120 378
Msa1425050 AT4G00230.1 34.156 770 434 22 41 783 26 749 1.09e-119 378
Msa1425050 AT4G21650.1 36.187 771 420 22 40 777 29 760 1.48e-118 375
Msa1425050 AT4G21630.1 34.143 782 443 19 30 777 10 753 1.87e-117 372
Msa1425050 AT5G11940.1 34.758 702 417 15 96 777 72 752 1.98e-117 372
Msa1425050 AT5G59130.4 34.023 773 423 25 33 777 12 725 3.52e-117 371
Msa1425050 AT5G59130.3 35.511 704 381 21 98 777 32 686 6.08e-117 369
Msa1425050 AT4G21326.1 35.622 699 403 14 99 777 16 687 1.19e-116 369
Msa1425050 AT5G58820.1 35.153 751 418 23 35 777 11 700 1.97e-116 368
Msa1425050 AT5G59130.2 34.197 772 413 26 33 777 12 715 8.40e-116 367
Msa1425050 AT4G15040.2 35.127 706 378 16 99 777 33 685 3.31e-115 364
Msa1425050 AT4G15040.1 35.127 706 378 16 99 777 33 685 3.31e-115 364
Msa1425050 AT4G21323.1 35.819 751 414 20 53 775 81 791 5.94e-115 367
Msa1425050 AT5G59130.1 33.894 773 420 26 33 777 12 721 1.40e-114 364
Msa1425050 AT1G32950.1 34.827 781 447 21 30 777 10 761 3.79e-114 364
Msa1425050 AT1G32950.2 35.955 712 406 17 99 777 16 710 2.17e-113 361
Msa1425050 AT4G21640.1 34.343 792 422 21 20 779 4 729 9.87e-113 359
Msa1425050 AT4G10530.1 32.864 782 435 26 35 777 5 735 2.13e-111 356
Msa1425050 AT5G45640.1 34.899 745 400 21 98 778 29 752 5.91e-109 350
Msa1425050 AT1G32970.1 39.965 573 291 19 236 777 172 722 9.58e-101 328
Msa1425050 AT4G30020.3 34.914 696 346 23 96 713 82 748 2.32e-99 326
Msa1425050 AT4G30020.1 34.914 696 346 23 96 713 82 748 2.32e-99 326
Msa1425050 AT4G30020.4 34.914 696 346 23 96 713 82 748 2.32e-99 326
Msa1425050 AT4G30020.2 34.914 696 346 23 96 713 82 748 2.32e-99 326
Msa1425050 AT5G58840.3 35.233 579 321 13 22 594 1 531 1.13e-94 306
Msa1425050 AT2G39850.1 32.853 764 409 28 78 780 48 768 3.74e-94 311
Msa1425050 AT5G03620.2 37.667 523 280 10 101 596 74 577 3.49e-92 300
Msa1425050 AT1G32940.3 37.163 557 300 14 86 603 48 593 2.92e-90 296
Msa1425050 AT1G30600.1 31.370 781 416 30 79 777 84 826 1.89e-87 295
Msa1425050 AT4G20430.2 30.874 732 426 20 101 778 120 825 4.75e-87 293
Msa1425050 AT4G00230.2 34.746 590 326 18 41 608 26 578 2.72e-86 285
Msa1425050 AT4G20430.3 29.615 753 432 21 101 778 120 849 1.90e-85 290
Msa1425050 AT4G20430.1 29.615 753 432 21 101 778 120 849 1.90e-85 290
Msa1425050 AT5G44530.1 30.677 753 420 25 101 777 107 833 3.26e-84 286
Msa1425050 AT5G44530.2 30.643 731 385 23 101 732 107 814 2.50e-80 276
Msa1425050 AT1G62340.1 29.216 753 441 24 101 780 99 832 4.96e-77 266
Msa1425050 AT1G20160.3 36.638 464 251 12 91 522 56 508 1.62e-76 258
Msa1425050 AT5G58840.2 32.213 506 292 11 22 522 1 460 3.54e-66 228
Msa1425050 AT2G19170.1 38.907 311 171 8 96 391 82 388 1.44e-56 208
Msa1425050 AT2G19170.1 41.667 228 106 8 500 713 533 747 4.73e-36 146
Msa1425050 AT2G19170.2 38.907 311 171 8 96 391 82 388 1.44e-56 208
Msa1425050 AT2G19170.2 41.667 228 106 8 500 713 533 747 4.73e-36 146
Msa1425050 AT5G44530.3 30.938 501 271 16 101 536 107 597 1.55e-52 193
Msa1425050 AT1G32980.1 46.354 192 92 5 559 747 3 186 8.72e-40 145
Msa1425050 AT5G59110.1 36.810 163 93 5 621 777 8 166 8.56e-23 96.7

Find 195 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTTGAAGCTTTCACTTTC+TGG 0.067339 tig0025818:+21224 None:intergenic
TGATTTAATACTAGCATTAT+TGG 0.130327 tig0025818:+19396 None:intergenic
GCCAAACAAGTTGGTGTTTA+AGG 0.131184 tig0025818:-19266 Msa1425050:CDS
TTGATAAGTTCTCCATTAAT+TGG 0.165231 tig0025818:+20042 None:intergenic
CAATTGTTCTAACCCTTCTT+TGG 0.224091 tig0025818:-19449 Msa1425050:CDS
AGGAAACACTTTAAGCTCTA+TGG 0.256212 tig0025818:+19091 None:intergenic
GTTTAATAGACAGTGGAATT+TGG 0.258680 tig0025818:-21247 Msa1425050:CDS
TTAAATGTCATGCTTGCTTT+TGG 0.275200 tig0025818:+19994 None:intergenic
TTTGATAGGTAAATCTCTTA+TGG 0.285445 tig0025818:+21361 None:intergenic
GAAGGCCATGTTCCGAAAAT+AGG 0.291086 tig0025818:+21299 None:intergenic
ACATTGATGTTCCACTTAAC+AGG 0.292079 tig0025818:+19782 None:intergenic
TGGTATTGCAGCTCTGTTGC+TGG 0.293194 tig0025818:+19829 None:intergenic
TGACTCCAAGTTGTTAAGTT+TGG 0.295807 tig0025818:-18962 Msa1425050:three_prime_UTR
CCAGCTTCGCCTTTAGCTTT+GGG 0.300154 tig0025818:-19610 Msa1425050:CDS
ACCAGCTTCGCCTTTAGCTT+TGG 0.303663 tig0025818:-19611 Msa1425050:CDS
CCAGATCATTACTTGATATT+CGG 0.314352 tig0025818:-18985 Msa1425050:three_prime_UTR
TTCCATCTTGAAGGGATATT+AGG 0.315283 tig0025818:+21191 None:intergenic
TCCTTAAACACCAACTTGTT+TGG 0.318323 tig0025818:+19265 None:intergenic
TGGAAAGGCAAGTGTGAAAA+TGG 0.319289 tig0025818:-21173 Msa1425050:CDS
TCCAGGATCAAGTGCTCTAT+TGG 0.325840 tig0025818:+19570 None:intergenic
AGATGTTCTTTCATTATCAT+TGG 0.329610 tig0025818:-20692 Msa1425050:CDS
ACATGGCCTTCAACACAATA+TGG 0.331930 tig0025818:-21287 Msa1425050:CDS
CACTGGTTTGTCTCTCTATC+CGG 0.333243 tig0025818:-20298 Msa1425050:CDS
GACTCCAAGTTGTTAAGTTT+GGG 0.335276 tig0025818:-18961 Msa1425050:three_prime_UTR
TAAAAGAAATGCACCCTTGT+TGG 0.342036 tig0025818:-19726 Msa1425050:CDS
TGTTGACTTGAGAAGGGTTT+GGG 0.358768 tig0025818:+21566 None:intergenic
CACTTGCCTTTCCATCTTGA+AGG 0.368365 tig0025818:+21182 None:intergenic
TGAGGTGAGTGTGTTGTGTC+TGG 0.375328 tig0025818:+21338 None:intergenic
GAGTATAGATGATCAATATT+TGG 0.385244 tig0025818:+21716 None:intergenic
GATGTTCTTTCATTATCATT+GGG 0.385405 tig0025818:-20691 Msa1425050:CDS
GTTCCTGGTGCTGTGATGTC+TGG 0.386277 tig0025818:+19883 None:intergenic
ATTAAGATCCAAGAGGTAAA+AGG 0.387551 tig0025818:+21803 None:intergenic
TCCTACTTCGGCTATGCCTC+TGG 0.392189 tig0025818:-20975 Msa1425050:CDS
CAATAAAAGAAGGGTAATTA+AGG 0.394074 tig0025818:+19425 None:intergenic
TTGAATATTAATGATTGCTT+AGG 0.396248 tig0025818:-19069 Msa1425050:three_prime_UTR
TTCATGGTTATAGTGATGTT+AGG 0.397204 tig0025818:+21071 None:intergenic
GATTAAAATGTTGATTTAGT+TGG 0.402040 tig0025818:-21826 Msa1425050:five_prime_UTR
TCTTATGGATGAAATATATC+CGG 0.411390 tig0025818:+21376 None:intergenic
ATGTCATGTCCACACGTTGC+AGG 0.412553 tig0025818:-19763 Msa1425050:CDS
AGCAACTTCAACCTGTTAAG+TGG 0.414233 tig0025818:-19793 Msa1425050:CDS
AATACTAGCATTATTGGAAA+AGG 0.414600 tig0025818:+19402 None:intergenic
GAACACTAATCTTAGCTTCA+TGG 0.418136 tig0025818:-19864 Msa1425050:CDS
ACACACTCACCTCACTTCAT+TGG 0.420756 tig0025818:-21329 Msa1425050:CDS
GAGGATAGAAGGTCCCAAAA+TGG 0.422910 tig0025818:-19215 Msa1425050:CDS
TTCAGAGCTTCAAGCTCTAA+AGG 0.422927 tig0025818:+21407 None:intergenic
GCAAATGTGGCTATAGCTAC+AGG 0.424372 tig0025818:+20640 None:intergenic
CATGTGAATAATATAGTTGT+TGG 0.426658 tig0025818:+21604 None:intergenic
GAAGCTAAGATTAGTGTTCC+TGG 0.427932 tig0025818:+19868 None:intergenic
GAAGCTCTGAAAACCATTCC+CGG 0.428259 tig0025818:-21395 Msa1425050:CDS
CCCAATAGAGCACTTGATCC+TGG 0.431139 tig0025818:-19571 Msa1425050:CDS
CCGAATATCAAGTAATGATC+TGG 0.431704 tig0025818:+18985 None:intergenic
TGTGTTGTGTCTGGTTTGAT+AGG 0.433260 tig0025818:+21347 None:intergenic
TAAGCAATCATTAATATTCA+AGG 0.434881 tig0025818:+19071 None:intergenic
TTTCATGGGGATTTAACACT+TGG 0.438899 tig0025818:-20336 Msa1425050:CDS
GGGGATTTAACACTTGGAAA+TGG 0.440284 tig0025818:-20330 Msa1425050:CDS
GCATACAAGTTGAGGATAGA+AGG 0.441589 tig0025818:-19226 Msa1425050:CDS
CACACTACAACCACTGCTGC+TGG 0.443019 tig0025818:-21017 Msa1425050:CDS
AATTTAGTTCTTCAAATTGA+AGG 0.444483 tig0025818:+21874 None:intergenic
CTAACATGGAACCCTTCAAT+AGG 0.445506 tig0025818:+19295 None:intergenic
TGTCATCATAGCCGATCTAA+TGG 0.447945 tig0025818:+19693 None:intergenic
GGAAACACTTTAAGCTCTAT+GGG 0.448985 tig0025818:+19092 None:intergenic
GACAGAATAAAAGTTGTTGC+GGG 0.452947 tig0025818:-20138 Msa1425050:CDS
CCAGGATCAAGTGCTCTATT+GGG 0.455478 tig0025818:+19571 None:intergenic
TCGCCTTTAGCTTTGGGAGC+CGG 0.456562 tig0025818:-19604 Msa1425050:CDS
TATGTCACGTGTGGAGTTCA+TGG 0.457154 tig0025818:+21055 None:intergenic
TTTCCACAACACCTTGTACA+TGG 0.458364 tig0025818:+20774 None:intergenic
TCAAATTATCACATGAGCTC+AGG 0.458858 tig0025818:+20241 None:intergenic
TAACTCGACTTTGGTTGCTT+AGG 0.459345 tig0025818:-18882 Msa1425050:three_prime_UTR
GAGGTGAAGGATTATGATAA+AGG 0.463563 tig0025818:+21655 None:intergenic
CGTTGGTTCCTCTCCAACAT+TGG 0.463759 tig0025818:+19339 None:intergenic
TGCTACTCAAGTGGATAACT+TGG 0.465885 tig0025818:-20160 Msa1425050:CDS
ATTGTCAAGTAGTGAGGAAA+GGG 0.467867 tig0025818:+21526 None:intergenic
CCAACTTTGTTGACTTGAGA+AGG 0.468731 tig0025818:+21559 None:intergenic
TATTAATGATTGCTTAGGTT+AGG 0.468949 tig0025818:-19064 Msa1425050:three_prime_UTR
TTGTTGACTTGAGAAGGGTT+TGG 0.470115 tig0025818:+21565 None:intergenic
TTGGAAAAGGCAATAAAAGA+AGG 0.472023 tig0025818:+19415 None:intergenic
ATAGCCGATCTAATGGCTGC+TGG 0.472411 tig0025818:+19700 None:intergenic
GAGAGACAAACCAGTGACTT+TGG 0.475671 tig0025818:+20305 None:intergenic
CCCAAAGCTAAAGGCGAAGC+TGG 0.477490 tig0025818:+19610 None:intergenic
CAAAGAACAGTAACCAATGT+TGG 0.481002 tig0025818:-19352 Msa1425050:CDS
CCTGGACTTGTTTATGATGC+AGG 0.481037 tig0025818:-19553 Msa1425050:CDS
ACTGGTTTGTCTCTCTATCC+GGG 0.481363 tig0025818:-20297 Msa1425050:CDS
ACAATGGATCGTGAATTTCA+TGG 0.481858 tig0025818:-20351 Msa1425050:CDS
CCACTTGAGTAGCAAGTGTT+CGG 0.482540 tig0025818:+20169 None:intergenic
ATGTCTGGTTTCAATACAAA+TGG 0.482788 tig0025818:+19898 None:intergenic
TAACTATCCACACTTGGTGC+TGG 0.482946 tig0025818:+19949 None:intergenic
TACAAGGTGTTGTGGAAAGA+AGG 0.492211 tig0025818:-20769 Msa1425050:CDS
AGTTGCTGAAGAGACTGTTC+TGG 0.493083 tig0025818:+19809 None:intergenic
TTTCTCCATGGCTGCAAATG+TGG 0.496242 tig0025818:+20627 None:intergenic
AGTAATATTGTCAAGTAGTG+AGG 0.501247 tig0025818:+21520 None:intergenic
TAGATGATCAATATTTGGTA+TGG 0.501633 tig0025818:+21721 None:intergenic
GGAAATGGAGCCAAAGTCAC+TGG 0.504040 tig0025818:-20315 Msa1425050:CDS
AATTAATGGAGAACTTATCA+AGG 0.504175 tig0025818:-20040 Msa1425050:CDS
TTGTGGAGAGTTTCAAGCAC+TGG 0.505059 tig0025818:+20568 None:intergenic
GCCAACATTACACCTATTGA+AGG 0.506828 tig0025818:-19307 Msa1425050:CDS
AATCTCTATTTAAGCCTCCA+TGG 0.506949 tig0025818:-21771 Msa1425050:exon
CAATGGATCGTGAATTTCAT+GGG 0.508806 tig0025818:-20350 Msa1425050:CDS
CCTGCATCATAAACAAGTCC+AGG 0.510762 tig0025818:+19553 None:intergenic
GGGTAATTAAGGTCCAAAGA+AGG 0.511365 tig0025818:+19436 None:intergenic
CCCTTCAATAGGTGTAATGT+TGG 0.512122 tig0025818:+19306 None:intergenic
TTGAGGCTAGTCACCACAAT+GGG 0.512323 tig0025818:+19130 None:intergenic
ACCTACACTAATGTCATGAA+TGG 0.513006 tig0025818:-21449 Msa1425050:CDS
TATACCCAAACTTAACAACT+TGG 0.515428 tig0025818:+18957 None:intergenic
CTTATGGATGAAATATATCC+GGG 0.515810 tig0025818:+21377 None:intergenic
ACTTGAGAAGGGTTTGGGCA+TGG 0.519588 tig0025818:+21571 None:intergenic
AACTTTACTTCCAGCAGCAG+TGG 0.521509 tig0025818:+21007 None:intergenic
CACACAATGTAGATGAAAAG+AGG 0.523103 tig0025818:+21636 None:intergenic
GGAGCTCGATTCTTTAACAA+AGG 0.531585 tig0025818:-21110 Msa1425050:CDS
CCTTCTCAAGTCAACAAAGT+TGG 0.539717 tig0025818:-21559 Msa1425050:CDS
TTCTTCAGGCAAGGTCCCAA+TGG 0.539934 tig0025818:-20268 Msa1425050:CDS
GGATGAAATATATCCGGGAA+TGG 0.540534 tig0025818:+21382 None:intergenic
ATGGCTGCTGGGCTCCAACA+AGG 0.540754 tig0025818:+19712 None:intergenic
CTCATCACAGACATTGGTAA+TGG 0.546640 tig0025818:-19640 Msa1425050:CDS
TATAGCCACATTTGCAGCCA+TGG 0.551323 tig0025818:-20632 Msa1425050:CDS
AAAAGGTGGCATACAAGTTG+AGG 0.554078 tig0025818:-19234 Msa1425050:CDS
CCGAACACTTGCTACTCAAG+TGG 0.554379 tig0025818:-20169 Msa1425050:CDS
ACTTGCCTTTCCATCTTGAA+GGG 0.556410 tig0025818:+21183 None:intergenic
AAACCAGACATCACAGCACC+AGG 0.556877 tig0025818:-19886 Msa1425050:CDS
AGACAGTGTACAAAACAAGA+TGG 0.558845 tig0025818:+22018 None:intergenic
TGGCTGCTGGGCTCCAACAA+GGG 0.558849 tig0025818:+19713 None:intergenic
AACTAGACATTAAAAGTGAA+AGG 0.560769 tig0025818:+18912 None:intergenic
TAATGCTAGTATTAAATCAA+AGG 0.561729 tig0025818:-19392 Msa1425050:CDS
TATTGTCAAGTAGTGAGGAA+AGG 0.561818 tig0025818:+21525 None:intergenic
GTTGAGGGTGCATCCTACTT+CGG 0.562979 tig0025818:-20987 Msa1425050:CDS
TGATTGCTTAGGTTAGGATG+AGG 0.563468 tig0025818:-19058 Msa1425050:three_prime_UTR
ATGAGCTCAGGAAAACCATT+GGG 0.563597 tig0025818:+20253 None:intergenic
TGGAAAAGGCAATAAAAGAA+GGG 0.565522 tig0025818:+19416 None:intergenic
TCTATTGGGATTGATATGTC+CGG 0.566787 tig0025818:+19585 None:intergenic
TGCCTAATATCCCTTCAAGA+TGG 0.567160 tig0025818:-21193 Msa1425050:CDS
GGACAGAATAAAAGTTGTTG+CGG 0.568482 tig0025818:-20139 Msa1425050:CDS
TTGCCTGAAGAAAAGTTCCC+CGG 0.569584 tig0025818:+20279 None:intergenic
GGTAATTAAGGTCCAAAGAA+GGG 0.570305 tig0025818:+19437 None:intergenic
GTGGATAGTTATAGCTCAAG+AGG 0.570426 tig0025818:-19937 Msa1425050:CDS
CATGAGCTCAGGAAAACCAT+TGG 0.572333 tig0025818:+20252 None:intergenic
TAGCCGATCTAATGGCTGCT+GGG 0.573964 tig0025818:+19701 None:intergenic
CAACTTTGTTGACTTGAGAA+GGG 0.574875 tig0025818:+21560 None:intergenic
TAGGTAATAACAGTTGCTGC+TGG 0.574960 tig0025818:-20375 Msa1425050:CDS
AAAGAACTCATCACAGACAT+TGG 0.579567 tig0025818:-19646 Msa1425050:CDS
ATCATTGGTTTAATAGACAG+TGG 0.581569 tig0025818:-21254 Msa1425050:CDS
ATGTAGATGAAAAGAGGTGA+AGG 0.582077 tig0025818:+21642 None:intergenic
TACAAAACCAGCACCAAGTG+TGG 0.583888 tig0025818:-19956 Msa1425050:CDS
AAGTAATGATCTGGTAATGA+CGG 0.584894 tig0025818:+18994 None:intergenic
TGTTTGGCACAACACTAACA+TGG 0.585342 tig0025818:+19281 None:intergenic
ATGTTGGCTACGTAGATCGT+TGG 0.587029 tig0025818:+19322 None:intergenic
GACAGTGTACAAAACAAGAT+GGG 0.587303 tig0025818:+22019 None:intergenic
TTACCCATGGTGTTCCATTG+TGG 0.588428 tig0025818:+20551 None:intergenic
CAAGCAAAGTGTTGAAACCA+TGG 0.588523 tig0025818:+21754 None:intergenic
TGCTCATGTATCCATGTACA+AGG 0.589509 tig0025818:-20785 Msa1425050:CDS
TGTCCGGCTCCCAAAGCTAA+AGG 0.592001 tig0025818:+19601 None:intergenic
TTTCATATCAAATAGTTCTG+AGG 0.593073 tig0025818:-20112 Msa1425050:CDS
AATATCCCTTCAAGATGGAA+AGG 0.594488 tig0025818:-21188 Msa1425050:CDS
GCTGCTGGAAGTAAAGTTGA+GGG 0.598290 tig0025818:-21002 Msa1425050:CDS
GAGCCCAGCAGCCATTAGAT+CGG 0.599696 tig0025818:-19704 Msa1425050:CDS
AACAGTTGCTGCTGGCACAA+TGG 0.600200 tig0025818:-20367 Msa1425050:CDS
AACAGTAACCAATGTTGGAG+AGG 0.601299 tig0025818:-19347 Msa1425050:CDS
TATCCATGTACAAGGTGTTG+TGG 0.603560 tig0025818:-20777 Msa1425050:CDS
TATGCCTCTGGATCAGCCAT+AGG 0.605864 tig0025818:-20963 Msa1425050:intron
GAGCTATAACTATCCACACT+TGG 0.608978 tig0025818:+19943 None:intergenic
ACAAATGGACAACTATGTGA+TGG 0.610446 tig0025818:+19913 None:intergenic
ATGTTCCGAAAATAGGATTG+AGG 0.612999 tig0025818:+21306 None:intergenic
TGCTGCTGGAAGTAAAGTTG+AGG 0.614714 tig0025818:-21003 Msa1425050:CDS
GTTAAAAGATGATCTCGTGA+TGG 0.616429 tig0025818:+19471 None:intergenic
CCAACATTACACCTATTGAA+GGG 0.618531 tig0025818:-19306 Msa1425050:CDS
ACACGTGACATAGACGGTCA+TGG 0.628186 tig0025818:-21044 Msa1425050:CDS
CAAATGTGGCTATAGCTACA+GGG 0.628730 tig0025818:+20641 None:intergenic
CTGGTTTGTCTCTCTATCCG+GGG 0.630663 tig0025818:-20296 Msa1425050:CDS
GTCAAGTAGTGAGGAAAGGG+TGG 0.633247 tig0025818:+21529 None:intergenic
GATACCTATGGCTGATCCAG+AGG 0.634269 tig0025818:+20959 None:intergenic
TCCAGAGGCATAGCCGAAGT+AGG 0.635263 tig0025818:+20974 None:intergenic
AACTCCACACGTGACATAGA+CGG 0.635875 tig0025818:-21050 Msa1425050:CDS
TCTCCACAATGGAACACCAT+GGG 0.638196 tig0025818:-20554 Msa1425050:intron
ATGAATATGTGAAGCCATGG+TGG 0.645111 tig0025818:+21694 None:intergenic
GCTACAGGGTCTTCATACAA+AGG 0.645706 tig0025818:+20655 None:intergenic
GTGATGAATATGTGAAGCCA+TGG 0.645739 tig0025818:+21691 None:intergenic
CAATGTTAGAAGTCCCATTG+TGG 0.651731 tig0025818:-19143 Msa1425050:CDS
TAGTGTTGTGCCAAACAAGT+TGG 0.651815 tig0025818:-19275 Msa1425050:CDS
GCTGCTACACCTGCAACGTG+TGG 0.653610 tig0025818:+19754 None:intergenic
TCTACATCTGCAGGGAACAG+AGG 0.655917 tig0025818:-20592 Msa1425050:CDS
GAAACACTTTAAGCTCTATG+GGG 0.658815 tig0025818:+19093 None:intergenic
ACCATTCATGACATTAGTGT+AGG 0.661281 tig0025818:+21448 None:intergenic
GTGCTTGAAACTCTCCACAA+TGG 0.662351 tig0025818:-20565 Msa1425050:CDS
AATGGATCGTGAATTTCATG+GGG 0.664232 tig0025818:-20349 Msa1425050:CDS
ATTGATAGTGCAATATCAGA+TGG 0.667169 tig0025818:-20718 Msa1425050:CDS
GGGGTGTTAATTCTGAGTTG+AGG 0.668165 tig0025818:+19113 None:intergenic
CTTCACTCAGAAGAATATCA+CGG 0.668501 tig0025818:-19494 Msa1425050:CDS
GGATTGAGGCCAATGAAGTG+AGG 0.671955 tig0025818:+21320 None:intergenic
TGAGTTGATTAAGATCCAAG+AGG 0.672746 tig0025818:+21796 None:intergenic
AAACACTTTAAGCTCTATGG+GGG 0.675132 tig0025818:+19094 None:intergenic
TACATGGATACATGAGCATG+TGG 0.676320 tig0025818:+20790 None:intergenic
CTCTCCACAATGGAACACCA+TGG 0.677964 tig0025818:-20555 Msa1425050:CDS
ATGACCGTCTATGTCACGTG+TGG 0.690392 tig0025818:+21046 None:intergenic
CAGAGCGAGAAACAAGATCG+TGG 0.709086 tig0025818:-20208 Msa1425050:CDS
GTTGAGGCTAGTCACCACAA+TGG 0.709647 tig0025818:+19129 None:intergenic
TGATCATCTATACTCCACCA+TGG 0.714073 tig0025818:-21708 Msa1425050:CDS
GCAAAGTGTTGAAACCATGG+AGG 0.744878 tig0025818:+21757 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAGGTAAAAATGTATTTTAA+GGG + tig0025818:18821-18840 None:intergenic 15.0%
!!! TAAGGTAAAAATGTATTTTA+AGG + tig0025818:18822-18841 None:intergenic 15.0%
!!! CTTGTTAAAAATGTATTTTA+AGG + tig0025818:18840-18859 None:intergenic 15.0%
!!! TGTTGTTAATTTTGAAATAA+CGG - tig0025818:18984-19003 Msa1425050:three_prime_UTR 15.0%
!! CCTATTATTAGATATAAATT+TGG + tig0025818:20090-20109 None:intergenic 15.0%
!! CCAAATTTATATCTAATAAT+AGG - tig0025818:20087-20106 Msa1425050:CDS 15.0%
!!! ATTTTTTTGAATCCAATTAA+TGG - tig0025818:20853-20872 Msa1425050:intron 15.0%
!!! ACATTTAATAAAACTGTTTT+AGG - tig0025818:20928-20947 Msa1425050:intron 15.0%
!!! AATTTAGTTCTTCAAATTGA+AGG + tig0025818:19036-19055 None:intergenic 20.0%
!!! ATTTTGTAAGTCAAATTTTG+AGG - tig0025818:19059-19078 Msa1425050:three_prime_UTR 20.0%
!!! GATTAAAATGTTGATTTAGT+TGG - tig0025818:19081-19100 Msa1425050:three_prime_UTR 20.0%
!!! TGAGTTTTGAAGAAAAAATA+TGG + tig0025818:19433-19452 None:intergenic 20.0%
!! TTTATATCTAATAATAGGCA+TGG - tig0025818:20092-20111 Msa1425050:CDS 20.0%
!! GTTTATACATAAGAAATGAT+TGG - tig0025818:20449-20468 Msa1425050:intron 20.0%
!! TATTACCTATTAGTGATAAA+GGG + tig0025818:20521-20540 None:intergenic 20.0%
!! TTATTACCTATTAGTGATAA+AGG + tig0025818:20522-20541 None:intergenic 20.0%
!! ATTGGATTCAAAAAAATAGA+TGG + tig0025818:20850-20869 None:intergenic 20.0%
!! TGATTTAATACTAGCATTAT+TGG + tig0025818:21514-21533 None:intergenic 20.0%
!! TAATGCTAGTATTAAATCAA+AGG - tig0025818:21515-21534 Msa1425050:CDS 20.0%
!!! AGCAAAATAAAGTAGTTTTT+GGG - tig0025818:21715-21734 Msa1425050:CDS 20.0%
!! TAAGCAATCATTAATATTCA+AGG + tig0025818:21839-21858 None:intergenic 20.0%
!! TTGAATATTAATGATTGCTT+AGG - tig0025818:21838-21857 Msa1425050:five_prime_UTR 20.0%
!! TATTGAGAAAAAAGAAATCA+AGG + tig0025818:21882-21901 None:intergenic 20.0%
!!! CTGTATTTTTTAAATTCGTA+CGG + tig0025818:22069-22088 None:intergenic 20.0%
!! ACGAATTTAAAAAATACAGT+TGG - tig0025818:22070-22089 Msa1425050:five_prime_UTR 20.0%
!! AATTTAAAAAATACAGTTGG+AGG - tig0025818:22073-22092 Msa1425050:five_prime_UTR 20.0%
!! ATTTAAAAAATACAGTTGGA+GGG - tig0025818:22074-22093 Msa1425050:five_prime_UTR 20.0%
!!! AAAATTGTGTGTTTTTTTGC+TGG - tig0025818:18943-18962 Msa1425050:three_prime_UTR 25.0%
! TAGATGATCAATATTTGGTA+TGG + tig0025818:19189-19208 None:intergenic 25.0%
! GAGTATAGATGATCAATATT+TGG + tig0025818:19194-19213 None:intergenic 25.0%
! CATGTGAATAATATAGTTGT+TGG + tig0025818:19306-19325 None:intergenic 25.0%
! AAGAAAAAATATGGTTCAAC+TGG + tig0025818:19424-19443 None:intergenic 25.0%
! TCTTATGGATGAAATATATC+CGG + tig0025818:19534-19553 None:intergenic 25.0%
! TTTGATAGGTAAATCTCTTA+TGG + tig0025818:19549-19568 None:intergenic 25.0%
!!! TTTTTTCCATATTGTGTTGA+AGG + tig0025818:19629-19648 None:intergenic 25.0%
!!! AGATATTTTAGTGATACCTA+TGG + tig0025818:19963-19982 None:intergenic 25.0%
! AGATGTTCTTTCATTATCAT+TGG - tig0025818:20215-20234 Msa1425050:CDS 25.0%
! GATGTTCTTTCATTATCATT+GGG - tig0025818:20216-20235 Msa1425050:CDS 25.0%
!! TTTCATATCAAATAGTTCTG+AGG - tig0025818:20795-20814 Msa1425050:CDS 25.0%
! TTGATAAGTTCTCCATTAAT+TGG + tig0025818:20868-20887 None:intergenic 25.0%
! AATTAATGGAGAACTTATCA+AGG - tig0025818:20867-20886 Msa1425050:intron 25.0%
! CAATAAAAGAAGGGTAATTA+AGG + tig0025818:21485-21504 None:intergenic 25.0%
! AATACTAGCATTATTGGAAA+AGG + tig0025818:21508-21527 None:intergenic 25.0%
! GTTTAAGGAGAAAAATGAAA+AGG - tig0025818:21656-21675 Msa1425050:CDS 25.0%
!!! ACTTTATTTTGCTCCATTTT+GGG + tig0025818:21708-21727 None:intergenic 25.0%
!!! TACTTTATTTTGCTCCATTT+TGG + tig0025818:21709-21728 None:intergenic 25.0%
!! GAGCAAAATAAAGTAGTTTT+TGG - tig0025818:21714-21733 Msa1425050:CDS 25.0%
! TATTAATGATTGCTTAGGTT+AGG - tig0025818:21843-21862 Msa1425050:five_prime_UTR 25.0%
! AGAAAAAAGAAATCAAGGAT+TGG + tig0025818:21877-21896 None:intergenic 25.0%
! AACTAGACATTAAAAGTGAA+AGG + tig0025818:21998-22017 None:intergenic 25.0%
!! TTTTAAATGTAACTCGACTT+TGG - tig0025818:22016-22035 Msa1425050:five_prime_UTR 25.0%
! TTTAAAAAATACAGTTGGAG+GGG - tig0025818:22075-22094 Msa1425050:five_prime_UTR 25.0%
ATTAAGATCCAAGAGGTAAA+AGG + tig0025818:19107-19126 None:intergenic 30.0%
AGTAATATTGTCAAGTAGTG+AGG + tig0025818:19390-19409 None:intergenic 30.0%
CTTATGGATGAAATATATCC+GGG + tig0025818:19533-19552 None:intergenic 30.0%
TATGGAAAAAACGTCATCAT+TGG - tig0025818:19638-19657 Msa1425050:CDS 30.0%
!! ATCATTGGTTTAATAGACAG+TGG - tig0025818:19653-19672 Msa1425050:CDS 30.0%
GTTTAATAGACAGTGGAATT+TGG - tig0025818:19660-19679 Msa1425050:CDS 30.0%
!!! AGTTTTTTGTTGCACAATGA+CGG + tig0025818:19773-19792 None:intergenic 30.0%
TTGTGCAACAAAAAACTCAT+AGG - tig0025818:19776-19795 Msa1425050:CDS 30.0%
TTCATGGTTATAGTGATGTT+AGG + tig0025818:19839-19858 None:intergenic 30.0%
!! ATTGATAGTGCAATATCAGA+TGG - tig0025818:20189-20208 Msa1425050:CDS 30.0%
! CACAAAAATGTTTTTCTCCA+TGG + tig0025818:20295-20314 None:intergenic 30.0%
CTATCTACTTCACTTTCATA+TGG + tig0025818:20476-20495 None:intergenic 30.0%
! TTAAATGTCATGCTTGCTTT+TGG + tig0025818:20916-20935 None:intergenic 30.0%
! ATGTCTGGTTTCAATACAAA+TGG + tig0025818:21012-21031 None:intergenic 30.0%
TGGAAAAGGCAATAAAAGAA+GGG + tig0025818:21494-21513 None:intergenic 30.0%
TTGGAAAAGGCAATAAAAGA+AGG + tig0025818:21495-21514 None:intergenic 30.0%
TAAGGAGAAAAATGAAAAGG+TGG - tig0025818:21659-21678 Msa1425050:CDS 30.0%
!!! TAGTTTTTGGGTATCTCATT+TGG - tig0025818:21727-21746 Msa1425050:CDS 30.0%
! AAGTAATGATCTGGTAATGA+CGG + tig0025818:21916-21935 None:intergenic 30.0%
CCAGATCATTACTTGATATT+CGG - tig0025818:21922-21941 Msa1425050:five_prime_UTR 30.0%
TATACCCAAACTTAACAACT+TGG + tig0025818:21953-21972 None:intergenic 30.0%
GACAGTGTACAAAACAAGAT+GGG + tig0025818:18891-18910 None:intergenic 35.0%
AGACAGTGTACAAAACAAGA+TGG + tig0025818:18892-18911 None:intergenic 35.0%
!! TTGTTTTGTACACTGTCTCT+TGG - tig0025818:18894-18913 Msa1425050:three_prime_UTR 35.0%
!! TGAGTTGATTAAGATCCAAG+AGG + tig0025818:19114-19133 None:intergenic 35.0%
AATCTCTATTTAAGCCTCCA+TGG - tig0025818:19136-19155 Msa1425050:CDS 35.0%
GAGGTGAAGGATTATGATAA+AGG + tig0025818:19255-19274 None:intergenic 35.0%
ATGTAGATGAAAAGAGGTGA+AGG + tig0025818:19268-19287 None:intergenic 35.0%
CACACAATGTAGATGAAAAG+AGG + tig0025818:19274-19293 None:intergenic 35.0%
!! CAACTTTGTTGACTTGAGAA+GGG + tig0025818:19350-19369 None:intergenic 35.0%
ATTGTCAAGTAGTGAGGAAA+GGG + tig0025818:19384-19403 None:intergenic 35.0%
TATTGTCAAGTAGTGAGGAA+AGG + tig0025818:19385-19404 None:intergenic 35.0%
ACCTACACTAATGTCATGAA+TGG - tig0025818:19458-19477 Msa1425050:CDS 35.0%
ACCATTCATGACATTAGTGT+AGG + tig0025818:19462-19481 None:intergenic 35.0%
!! ATTGGCCTCAATCCTATTTT+CGG - tig0025818:19596-19615 Msa1425050:CDS 35.0%
ATGTTCCGAAAATAGGATTG+AGG + tig0025818:19604-19623 None:intergenic 35.0%
! TCAATCCTATTTTCGGAACA+TGG - tig0025818:19603-19622 Msa1425050:CDS 35.0%
!! TCTTTGAAGCTTTCACTTTC+TGG + tig0025818:19686-19705 None:intergenic 35.0%
TTCCATCTTGAAGGGATATT+AGG + tig0025818:19719-19738 None:intergenic 35.0%
AATATCCCTTCAAGATGGAA+AGG - tig0025818:19719-19738 Msa1425050:CDS 35.0%
!! ATTATCATTGGGTTTTGACG+AGG - tig0025818:20227-20246 Msa1425050:CDS 35.0%
! ATTTTTGTGTCTACATCTGC+AGG - tig0025818:20306-20325 Msa1425050:CDS 35.0%
! TTTTTGTGTCTACATCTGCA+GGG - tig0025818:20307-20326 Msa1425050:CDS 35.0%
GCAGTAAGTAATATTACCCA+TGG + tig0025818:20372-20391 None:intergenic 35.0%
ACTCACCCTTTATCACTAAT+AGG - tig0025818:20513-20532 Msa1425050:intron 35.0%
ACAATGGATCGTGAATTTCA+TGG - tig0025818:20556-20575 Msa1425050:CDS 35.0%
CAATGGATCGTGAATTTCAT+GGG - tig0025818:20557-20576 Msa1425050:CDS 35.0%
AATGGATCGTGAATTTCATG+GGG - tig0025818:20558-20577 Msa1425050:CDS 35.0%
TTTCATGGGGATTTAACACT+TGG - tig0025818:20571-20590 Msa1425050:CDS 35.0%
TCAAATTATCACATGAGCTC+AGG + tig0025818:20669-20688 None:intergenic 35.0%
GGACAGAATAAAAGTTGTTG+CGG - tig0025818:20768-20787 Msa1425050:CDS 35.0%
GACAGAATAAAAGTTGTTGC+GGG - tig0025818:20769-20788 Msa1425050:CDS 35.0%
ACAAATGGACAACTATGTGA+TGG + tig0025818:20997-21016 None:intergenic 35.0%
GAACACTAATCTTAGCTTCA+TGG - tig0025818:21043-21062 Msa1425050:CDS 35.0%
ACATTGATGTTCCACTTAAC+AGG + tig0025818:21128-21147 None:intergenic 35.0%
TAAAAGAAATGCACCCTTGT+TGG - tig0025818:21181-21200 Msa1425050:CDS 35.0%
AAAGAACTCATCACAGACAT+TGG - tig0025818:21261-21280 Msa1425050:CDS 35.0%
TCTATTGGGATTGATATGTC+CGG + tig0025818:21325-21344 None:intergenic 35.0%
CTTCACTCAGAAGAATATCA+CGG - tig0025818:21413-21432 Msa1425050:CDS 35.0%
GTTAAAAGATGATCTCGTGA+TGG + tig0025818:21439-21458 None:intergenic 35.0%
CAATTGTTCTAACCCTTCTT+TGG - tig0025818:21458-21477 Msa1425050:CDS 35.0%
GGTAATTAAGGTCCAAAGAA+GGG + tig0025818:21473-21492 None:intergenic 35.0%
CAAAGAACAGTAACCAATGT+TGG - tig0025818:21555-21574 Msa1425050:CDS 35.0%
CCAACATTACACCTATTGAA+GGG - tig0025818:21601-21620 Msa1425050:CDS 35.0%
! TCCTTAAACACCAACTTGTT+TGG + tig0025818:21645-21664 None:intergenic 35.0%
AAACACTTTAAGCTCTATGG+GGG + tig0025818:21816-21835 None:intergenic 35.0%
GAAACACTTTAAGCTCTATG+GGG + tig0025818:21817-21836 None:intergenic 35.0%
GGAAACACTTTAAGCTCTAT+GGG + tig0025818:21818-21837 None:intergenic 35.0%
AGGAAACACTTTAAGCTCTA+TGG + tig0025818:21819-21838 None:intergenic 35.0%
CCGAATATCAAGTAATGATC+TGG + tig0025818:21925-21944 None:intergenic 35.0%
TGACTCCAAGTTGTTAAGTT+TGG - tig0025818:21945-21964 Msa1425050:five_prime_UTR 35.0%
GACTCCAAGTTGTTAAGTTT+GGG - tig0025818:21946-21965 Msa1425050:five_prime_UTR 35.0%
!!! TTAGTTGGCCTTTTACCTCT+TGG - tig0025818:19096-19115 Msa1425050:exon 40.0%
!! CAAGCAAAGTGTTGAAACCA+TGG + tig0025818:19156-19175 None:intergenic 40.0%
TGATCATCTATACTCCACCA+TGG - tig0025818:19199-19218 Msa1425050:CDS 40.0%
ATGAATATGTGAAGCCATGG+TGG + tig0025818:19216-19235 None:intergenic 40.0%
GTGATGAATATGTGAAGCCA+TGG + tig0025818:19219-19238 None:intergenic 40.0%
!! TGTTGACTTGAGAAGGGTTT+GGG + tig0025818:19344-19363 None:intergenic 40.0%
!! TTGTTGACTTGAGAAGGGTT+TGG + tig0025818:19345-19364 None:intergenic 40.0%
!! CCAACTTTGTTGACTTGAGA+AGG + tig0025818:19351-19370 None:intergenic 40.0%
CCTTCTCAAGTCAACAAAGT+TGG - tig0025818:19348-19367 Msa1425050:CDS 40.0%
! TTCAGAGCTTCAAGCTCTAA+AGG + tig0025818:19503-19522 None:intergenic 40.0%
GGATGAAATATATCCGGGAA+TGG + tig0025818:19528-19547 None:intergenic 40.0%
! TGTGTTGTGTCTGGTTTGAT+AGG + tig0025818:19563-19582 None:intergenic 40.0%
ACATGGCCTTCAACACAATA+TGG - tig0025818:19620-19639 Msa1425050:CDS 40.0%
TGCCTAATATCCCTTCAAGA+TGG - tig0025818:19714-19733 Msa1425050:CDS 40.0%
ACTTGCCTTTCCATCTTGAA+GGG + tig0025818:19727-19746 None:intergenic 40.0%
TGGAAAGGCAAGTGTGAAAA+TGG - tig0025818:19734-19753 Msa1425050:CDS 40.0%
GGAGCTCGATTCTTTAACAA+AGG - tig0025818:19797-19816 Msa1425050:CDS 40.0%
TACATGGATACATGAGCATG+TGG + tig0025818:20120-20139 None:intergenic 40.0%
TGCTCATGTATCCATGTACA+AGG - tig0025818:20122-20141 Msa1425050:CDS 40.0%
!! TATCCATGTACAAGGTGTTG+TGG - tig0025818:20130-20149 Msa1425050:CDS 40.0%
TTTCCACAACACCTTGTACA+TGG + tig0025818:20136-20155 None:intergenic 40.0%
!! TACAAGGTGTTGTGGAAAGA+AGG - tig0025818:20138-20157 Msa1425050:CDS 40.0%
CAAATGTGGCTATAGCTACA+GGG + tig0025818:20269-20288 None:intergenic 40.0%
TAGGTAATAACAGTTGCTGC+TGG - tig0025818:20532-20551 Msa1425050:intron 40.0%
GGGGATTTAACACTTGGAAA+TGG - tig0025818:20577-20596 Msa1425050:CDS 40.0%
ATGAGCTCAGGAAAACCATT+GGG + tig0025818:20657-20676 None:intergenic 40.0%
TGCTACTCAAGTGGATAACT+TGG - tig0025818:20747-20766 Msa1425050:CDS 40.0%
GAGCTATAACTATCCACACT+TGG + tig0025818:20967-20986 None:intergenic 40.0%
GTGGATAGTTATAGCTCAAG+AGG - tig0025818:20970-20989 Msa1425050:CDS 40.0%
GAAGCTAAGATTAGTGTTCC+TGG + tig0025818:21042-21061 None:intergenic 40.0%
! TCTGTTGCTGGAACATTTTG+AGG + tig0025818:21069-21088 None:intergenic 40.0%
AGCAACTTCAACCTGTTAAG+TGG - tig0025818:21114-21133 Msa1425050:CDS 40.0%
TGTCATCATAGCCGATCTAA+TGG + tig0025818:21217-21236 None:intergenic 40.0%
CTCATCACAGACATTGGTAA+TGG - tig0025818:21267-21286 Msa1425050:CDS 40.0%
GGGTAATTAAGGTCCAAAGA+AGG + tig0025818:21474-21493 None:intergenic 40.0%
AACAGTAACCAATGTTGGAG+AGG - tig0025818:21560-21579 Msa1425050:CDS 40.0%
GCCAACATTACACCTATTGA+AGG - tig0025818:21600-21619 Msa1425050:CDS 40.0%
CCCTTCAATAGGTGTAATGT+TGG + tig0025818:21604-21623 None:intergenic 40.0%
CTAACATGGAACCCTTCAAT+AGG + tig0025818:21615-21634 None:intergenic 40.0%
TGTTTGGCACAACACTAACA+TGG + tig0025818:21629-21648 None:intergenic 40.0%
TAGTGTTGTGCCAAACAAGT+TGG - tig0025818:21632-21651 Msa1425050:CDS 40.0%
!! GCCAAACAAGTTGGTGTTTA+AGG - tig0025818:21641-21660 Msa1425050:CDS 40.0%
AAAAGGTGGCATACAAGTTG+AGG - tig0025818:21673-21692 Msa1425050:CDS 40.0%
! GCATACAAGTTGAGGATAGA+AGG - tig0025818:21681-21700 Msa1425050:CDS 40.0%
CAATGTTAGAAGTCCCATTG+TGG - tig0025818:21764-21783 Msa1425050:exon 40.0%
TGATTGCTTAGGTTAGGATG+AGG - tig0025818:21849-21868 Msa1425050:five_prime_UTR 40.0%
TAACTCGACTTTGGTTGCTT+AGG - tig0025818:22025-22044 Msa1425050:five_prime_UTR 40.0%
!! GCAAAGTGTTGAAACCATGG+AGG + tig0025818:19153-19172 None:intergenic 45.0%
!! GAAGCTCTGAAAACCATTCC+CGG - tig0025818:19512-19531 Msa1425050:CDS 45.0%
ACACACTCACCTCACTTCAT+TGG - tig0025818:19578-19597 Msa1425050:CDS 45.0%
GAAGGCCATGTTCCGAAAAT+AGG + tig0025818:19611-19630 None:intergenic 45.0%
CACTTGCCTTTCCATCTTGA+AGG + tig0025818:19728-19747 None:intergenic 45.0%
TATGTCACGTGTGGAGTTCA+TGG + tig0025818:19855-19874 None:intergenic 45.0%
AACTCCACACGTGACATAGA+CGG - tig0025818:19857-19876 Msa1425050:CDS 45.0%
AACTTTACTTCCAGCAGCAG+TGG + tig0025818:19903-19922 None:intergenic 45.0%
TGCTGCTGGAAGTAAAGTTG+AGG - tig0025818:19904-19923 Msa1425050:CDS 45.0%
GCTGCTGGAAGTAAAGTTGA+GGG - tig0025818:19905-19924 Msa1425050:CDS 45.0%
GCTACAGGGTCTTCATACAA+AGG + tig0025818:20255-20274 None:intergenic 45.0%
GCAAATGTGGCTATAGCTAC+AGG + tig0025818:20270-20289 None:intergenic 45.0%
TATAGCCACATTTGCAGCCA+TGG - tig0025818:20275-20294 Msa1425050:CDS 45.0%
TTTCTCCATGGCTGCAAATG+TGG + tig0025818:20283-20302 None:intergenic 45.0%
TTGTGGAGAGTTTCAAGCAC+TGG + tig0025818:20342-20361 None:intergenic 45.0%
GTGCTTGAAACTCTCCACAA+TGG - tig0025818:20342-20361 Msa1425050:CDS 45.0%
TCTCCACAATGGAACACCAT+GGG - tig0025818:20353-20372 Msa1425050:CDS 45.0%
TTACCCATGGTGTTCCATTG+TGG + tig0025818:20359-20378 None:intergenic 45.0%
GAGAGACAAACCAGTGACTT+TGG + tig0025818:20605-20624 None:intergenic 45.0%
!! CACTGGTTTGTCTCTCTATC+CGG - tig0025818:20609-20628 Msa1425050:CDS 45.0%
!! ACTGGTTTGTCTCTCTATCC+GGG - tig0025818:20610-20629 Msa1425050:CDS 45.0%
! TATCCGGGGAACTTTTCTTC+AGG - tig0025818:20625-20644 Msa1425050:CDS 45.0%
TTGCCTGAAGAAAAGTTCCC+CGG + tig0025818:20631-20650 None:intergenic 45.0%
CATGAGCTCAGGAAAACCAT+TGG + tig0025818:20658-20677 None:intergenic 45.0%
CCACTTGAGTAGCAAGTGTT+CGG + tig0025818:20741-20760 None:intergenic 45.0%
TACAAAACCAGCACCAAGTG+TGG - tig0025818:20951-20970 Msa1425050:intron 45.0%
!! TAACTATCCACACTTGGTGC+TGG + tig0025818:20961-20980 None:intergenic 45.0%
AGTTGCTGAAGAGACTGTTC+TGG + tig0025818:21101-21120 None:intergenic 45.0%
CCAGGATCAAGTGCTCTATT+GGG + tig0025818:21339-21358 None:intergenic 45.0%
TCCAGGATCAAGTGCTCTAT+TGG + tig0025818:21340-21359 None:intergenic 45.0%
CCTGCATCATAAACAAGTCC+AGG + tig0025818:21357-21376 None:intergenic 45.0%
! CCTGGACTTGTTTATGATGC+AGG - tig0025818:21354-21373 Msa1425050:CDS 45.0%
! ATGTTGGCTACGTAGATCGT+TGG + tig0025818:21588-21607 None:intergenic 45.0%
GAGGATAGAAGGTCCCAAAA+TGG - tig0025818:21692-21711 Msa1425050:CDS 45.0%
! TTGAGGCTAGTCACCACAAT+GGG + tig0025818:21780-21799 None:intergenic 45.0%
! GGGGTGTTAATTCTGAGTTG+AGG + tig0025818:21797-21816 None:intergenic 45.0%
ACTTGAGAAGGGTTTGGGCA+TGG + tig0025818:19339-19358 None:intergenic 50.0%
GTCAAGTAGTGAGGAAAGGG+TGG + tig0025818:19381-19400 None:intergenic 50.0%
TGAGGTGAGTGTGTTGTGTC+TGG + tig0025818:19572-19591 None:intergenic 50.0%
GGATTGAGGCCAATGAAGTG+AGG + tig0025818:19590-19609 None:intergenic 50.0%
ATGACCGTCTATGTCACGTG+TGG + tig0025818:19864-19883 None:intergenic 50.0%
ACACGTGACATAGACGGTCA+TGG - tig0025818:19863-19882 Msa1425050:CDS 50.0%
! GTTGAGGGTGCATCCTACTT+CGG - tig0025818:19920-19939 Msa1425050:CDS 50.0%
TATGCCTCTGGATCAGCCAT+AGG - tig0025818:19944-19963 Msa1425050:CDS 50.0%
GATACCTATGGCTGATCCAG+AGG + tig0025818:19951-19970 None:intergenic 50.0%
TCTACATCTGCAGGGAACAG+AGG - tig0025818:20315-20334 Msa1425050:CDS 50.0%
CTCTCCACAATGGAACACCA+TGG - tig0025818:20352-20371 Msa1425050:CDS 50.0%
AACAGTTGCTGCTGGCACAA+TGG - tig0025818:20540-20559 Msa1425050:intron 50.0%
GGAAATGGAGCCAAAGTCAC+TGG - tig0025818:20592-20611 Msa1425050:CDS 50.0%
! CTGGTTTGTCTCTCTATCCG+GGG - tig0025818:20611-20630 Msa1425050:CDS 50.0%
! GGGGAACTTTTCTTCAGGCA+AGG - tig0025818:20630-20649 Msa1425050:CDS 50.0%
TTCTTCAGGCAAGGTCCCAA+TGG - tig0025818:20639-20658 Msa1425050:CDS 50.0%
CAGAGCGAGAAACAAGATCG+TGG - tig0025818:20699-20718 Msa1425050:CDS 50.0%
! CCGAACACTTGCTACTCAAG+TGG - tig0025818:20738-20757 Msa1425050:CDS 50.0%
AAACCAGACATCACAGCACC+AGG - tig0025818:21021-21040 Msa1425050:CDS 50.0%
TGGTATTGCAGCTCTGTTGC+TGG + tig0025818:21081-21100 None:intergenic 50.0%
ATGTCATGTCCACACGTTGC+AGG - tig0025818:21144-21163 Msa1425050:CDS 50.0%
TAGCCGATCTAATGGCTGCT+GGG + tig0025818:21209-21228 None:intergenic 50.0%
ATAGCCGATCTAATGGCTGC+TGG + tig0025818:21210-21229 None:intergenic 50.0%
! ACCAGCTTCGCCTTTAGCTT+TGG - tig0025818:21296-21315 Msa1425050:CDS 50.0%
!! CCAGCTTCGCCTTTAGCTTT+GGG - tig0025818:21297-21316 Msa1425050:CDS 50.0%
! CCCAATAGAGCACTTGATCC+TGG - tig0025818:21336-21355 Msa1425050:CDS 50.0%
!! CGTTGGTTCCTCTCCAACAT+TGG + tig0025818:21571-21590 None:intergenic 50.0%
! GTTGAGGCTAGTCACCACAA+TGG + tig0025818:21781-21800 None:intergenic 50.0%
CACACTACAACCACTGCTGC+TGG - tig0025818:19890-19909 Msa1425050:CDS 55.0%
TCCTACTTCGGCTATGCCTC+TGG - tig0025818:19932-19951 Msa1425050:CDS 55.0%
! TCCAGAGGCATAGCCGAAGT+AGG + tig0025818:19936-19955 None:intergenic 55.0%
!! GTTCCTGGTGCTGTGATGTC+TGG + tig0025818:21027-21046 None:intergenic 55.0%
GAGCCCAGCAGCCATTAGAT+CGG - tig0025818:21203-21222 Msa1425050:CDS 55.0%
CCCAAAGCTAAAGGCGAAGC+TGG + tig0025818:21300-21319 None:intergenic 55.0%
!! TCGCCTTTAGCTTTGGGAGC+CGG - tig0025818:21303-21322 Msa1425050:CDS 55.0%
TGTCCGGCTCCCAAAGCTAA+AGG + tig0025818:21309-21328 None:intergenic 55.0%
GCTGCTACACCTGCAACGTG+TGG + tig0025818:21156-21175 None:intergenic 60.0%
TGGCTGCTGGGCTCCAACAA+GGG + tig0025818:21197-21216 None:intergenic 60.0%
ATGGCTGCTGGGCTCCAACA+AGG + tig0025818:21198-21217 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
tig0025818 gene 18813 22116 18813 ID=Msa1425050;Name=Msa1425050
tig0025818 mRNA 18813 22116 18813 ID=Msa1425050-mRNA-1;Parent=Msa1425050;Name=Msa1425050-mRNA-1;_AED=0.01;_eAED=0.01;_QI=342|1|1|1|1|1|3|295|787
tig0025818 exon 18813 20394 18813 ID=Msa1425050-mRNA-1:exon:4118;Parent=Msa1425050-mRNA-1
tig0025818 exon 20555 20820 20555 ID=Msa1425050-mRNA-1:exon:4117;Parent=Msa1425050-mRNA-1
tig0025818 exon 20964 22116 20964 ID=Msa1425050-mRNA-1:exon:4116;Parent=Msa1425050-mRNA-1
tig0025818 five_prime_UTR 21775 22116 21775 ID=Msa1425050-mRNA-1:five_prime_utr;Parent=Msa1425050-mRNA-1
tig0025818 CDS 20964 21774 20964 ID=Msa1425050-mRNA-1:cds;Parent=Msa1425050-mRNA-1
tig0025818 CDS 20555 20820 20555 ID=Msa1425050-mRNA-1:cds;Parent=Msa1425050-mRNA-1
tig0025818 CDS 19108 20394 19108 ID=Msa1425050-mRNA-1:cds;Parent=Msa1425050-mRNA-1
tig0025818 three_prime_UTR 18813 19107 18813 ID=Msa1425050-mRNA-1:three_prime_utr;Parent=Msa1425050-mRNA-1
Gene Sequence

>Msa1425050

ATGGTTTCAACACTTTGCTTGTGCACTAAAGCCATACCAAATATTGATCATCTATACTCCACCATGGCTTCACATATTCATCACTATCTACTATTATCCTTTATCATAATCCTTCACCTCTTTTCATCTACATTGTGTGATCAAAACTCCAACAACTATATTATTCACATGAACTTATCAGCCATGCCCAAACCCTTCTCAAGTCAACAAAGTTGGTACTTAGCCACCCTTTCCTCACTACTTGACAATATTACTTCTAACAACGACCAGTTGAACCATATTTTTTCTTCAAAACTCACATATACCTACACTAATGTCATGAATGGTTTCAGTGCAAGTTTGTCTCCTTTAGAGCTTGAAGCTCTGAAAACCATTCCCGGATATATTTCATCCATAAGAGATTTACCTATCAAACCAGACACAACACACTCACCTCACTTCATTGGCCTCAATCCTATTTTCGGAACATGGCCTTCAACACAATATGGAAAAAACGTCATCATTGGTTTAATAGACAGTGGAATTTGGCCAGAAAGTGAAAGCTTCAAAGATGATGAGATGCCTAATATCCCTTCAAGATGGAAAGGCAAGTGTGAAAATGGTACTCAATTTGATCCGTCATTGTGCAACAAAAAACTCATAGGAGCTCGATTCTTTAACAAAGGATTACTAGCAAATAATCCTAACATCACTATAACCATGAACTCCACACGTGACATAGACGGTCATGGTACTCACACTACAACCACTGCTGCTGGAAGTAAAGTTGAGGGTGCATCCTACTTCGGCTATGCCTCTGGATCAGCCATAGGCATGGCTCCACATGCTCATGTATCCATGTACAAGGTGTTGTGGAAAGAAGGAGCATATGCATCTGATACAATAGCTGCAATTGATAGTGCAATATCAGATGGTGTAGATGTTCTTTCATTATCATTGGGTTTTGACGAGGCACCTTTGTATGAAGACCCTGTAGCTATAGCCACATTTGCAGCCATGGAGAAAAACATTTTTGTGTCTACATCTGCAGGGAACAGAGGACCAGTGCTTGAAACTCTCCACAATGGAACACCATGGGTAATAACAGTTGCTGCTGGCACAATGGATCGTGAATTTCATGGGGATTTAACACTTGGAAATGGAGCCAAAGTCACTGGTTTGTCTCTCTATCCGGGGAACTTTTCTTCAGGCAAGGTCCCAATGGTTTTCCTGAGCTCATGTGATAATTTGAAAGAACTCATCAGAGCGAGAAACAAGATCGTGGTGTGTGAAGACAAGAACCGAACACTTGCTACTCAAGTGGATAACTTGGACAGAATAAAAGTTGTTGCGGGTGTTTTCATATCAAATAGTTCTGAGGATATAACATATTACATTCAAACTAAGTTTCCATCTATTTTTTTGAATCCAATTAATGGAGAACTTATCAAGGATTTCATCAAGTGCAACACTAATCCAAAAGCAAGCATGACATTTAATAAAACTGTTTTAGGTACAAAACCAGCACCAAGTGTGGATAGTTATAGCTCAAGAGGACCATCACATAGTTGTCCATTTGTATTGAAACCAGACATCACAGCACCAGGAACACTAATCTTAGCTTCATGGCCTCAAAATGTTCCAGCAACAGAGCTGCAATACCAGAACAGTCTCTTCAGCAACTTCAACCTGTTAAGTGGAACATCAATGTCATGTCCACACGTTGCAGGTGTAGCAGCACTTTTAAAAGAAATGCACCCTTGTTGGAGCCCAGCAGCCATTAGATCGGCTATGATGACAACATCAGACATGTTAGACAACACAAAAGAACTCATCACAGACATTGGTAATGGTTACAAACCAGCTTCGCCTTTAGCTTTGGGAGCCGGACATATCAATCCCAATAGAGCACTTGATCCTGGACTTGTTTATGATGCAGGAAAACAAGATTATGTGAATCTTCTATGTGCATTAAACTTCACTCAGAAGAATATCACGGCCATCACGAGATCATCTTTTAACAATTGTTCTAACCCTTCTTTGGACCTTAATTACCCTTCTTTTATTGCCTTTTCCAATAATGCTAGTATTAAATCAAAGGTGATTACACAAGAATTTCAAAGAACAGTAACCAATGTTGGAGAGGAACCAACGATCTACGTAGCCAACATTACACCTATTGAAGGGTTCCATGTTAGTGTTGTGCCAAACAAGTTGGTGTTTAAGGAGAAAAATGAAAAGGTGGCATACAAGTTGAGGATAGAAGGTCCCAAAATGGAGCAAAATAAAGTAGTTTTTGGGTATCTCATTTGGACAGACTCGAAACACAATGTTAGAAGTCCCATTGTGGTGACTAGCCTCAACTCAGAATTAACACCCCCATAG
Protein sequence

>Msa1425050

MVSTLCLCTKAIPNIDHLYSTMASHIHHYLLLSFIIILHLFSSTLCDQNSNNYIIHMNLSAMPKPFSSQQSWYLATLSSLLDNITSNNDQLNHIFSSKLTYTYTNVMNGFSASLSPLELEALKTIPGYISSIRDLPIKPDTTHSPHFIGLNPIFGTWPSTQYGKNVIIGLIDSGIWPESESFKDDEMPNIPSRWKGKCENGTQFDPSLCNKKLIGARFFNKGLLANNPNITITMNSTRDIDGHGTHTTTTAAGSKVEGASYFGYASGSAIGMAPHAHVSMYKVLWKEGAYASDTIAAIDSAISDGVDVLSLSLGFDEAPLYEDPVAIATFAAMEKNIFVSTSAGNRGPVLETLHNGTPWVITVAAGTMDREFHGDLTLGNGAKVTGLSLYPGNFSSGKVPMVFLSSCDNLKELIRARNKIVVCEDKNRTLATQVDNLDRIKVVAGVFISNSSEDITYYIQTKFPSIFLNPINGELIKDFIKCNTNPKASMTFNKTVLGTKPAPSVDSYSSRGPSHSCPFVLKPDITAPGTLILASWPQNVPATELQYQNSLFSNFNLLSGTSMSCPHVAGVAALLKEMHPCWSPAAIRSAMMTTSDMLDNTKELITDIGNGYKPASPLALGAGHINPNRALDPGLVYDAGKQDYVNLLCALNFTQKNITAITRSSFNNCSNPSLDLNYPSFIAFSNNASIKSKVITQEFQRTVTNVGEEPTIYVANITPIEGFHVSVVPNKLVFKEKNEKVAYKLRIEGPKMEQNKVVFGYLIWTDSKHNVRSPIVVTSLNSELTPP*