AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1260640


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1260640 MtrunA17_Chr4g0062121 98.724 392 5 0 1 392 1 392 0.0 778
Msa1260640 MtrunA17_Chr4g0062521 94.771 153 5 1 3 155 1 150 4.80e-94 278
Msa1260640 MtrunA17_Chr4g0062141 90.909 143 13 0 1 143 1 143 9.02e-85 254
Msa1260640 MtrunA17_Chr3g0121591 29.012 162 102 3 189 349 318 467 7.08e-17 82.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1260640 AT5G23060.1 69.898 392 106 7 7 392 2 387 0.0 543
Msa1260640 AT5G23060.2 69.775 311 86 5 7 311 2 310 7.42e-152 431
Msa1260640 AT3G59780.1 29.630 162 101 4 189 349 376 525 3.87e-17 84.0

Find 134 sgRNAs with CRISPR-Local

Find 263 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGGTTCAGGTGGTTGGTTC+TGG 0.203917 8_2:+62678547 Msa1260640:CDS
TCAAGTTCCATGTTGTTTAA+TGG 0.209415 8_2:+62681730 Msa1260640:three_prime_UTR
CACGAGTGGAAGAGTTTAAA+AGG 0.251135 8_2:-62681624 None:intergenic
AAGTGCTTCTTGAGCCTTCT+TGG 0.258220 8_2:-62678707 None:intergenic
ACCTCTTGTTTCCTCCTATC+TGG 0.273177 8_2:+62680220 Msa1260640:CDS
TAAGGTGAGTTAGGGTCTTC+TGG 0.301199 8_2:-62681812 None:intergenic
GCGGGTGTTAGAGGAGGTTT+TGG 0.312180 8_2:+62681432 Msa1260640:CDS
ATAGTTGCTAGAACGCTAAC+AGG 0.324437 8_2:+62681276 Msa1260640:CDS
AACACCCGCAGGGATGATTC+TGG 0.332686 8_2:-62681418 None:intergenic
GAGTGATAATAAGGTGAGTT+AGG 0.333132 8_2:-62681821 None:intergenic
TTGATGGGAAAATTCTACTA+TGG 0.337458 8_2:-62681880 None:intergenic
ATGTAGCATCTTTGTATTTG+AGG 0.341388 8_2:-62678061 None:intergenic
TTTGGAGGAGAATATAATTT+GGG 0.344653 8_2:-62678002 None:intergenic
AGCAAACCTTAGCAGCAGTT+TGG 0.346069 8_2:-62678750 None:intergenic
ACAGCAGCTCTAGCTTCATT+TGG 0.354989 8_2:-62678374 None:intergenic
TCAGATCCTACCGTGATTGC+TGG 0.363406 8_2:+62680171 Msa1260640:CDS
TGTCCAGCCTGCTGCACAAT+TGG 0.364015 8_2:-62678643 None:intergenic
GCAAACCTTAGCAGCAGTTT+GGG 0.377401 8_2:-62678749 None:intergenic
ATCATCCCTGCGGGTGTTAG+AGG 0.388579 8_2:+62681423 Msa1260640:CDS
ACACACATGGAGTGATAATA+AGG 0.389253 8_2:-62681830 None:intergenic
AGGCACCAACATTGTGATCT+TGG 0.398969 8_2:+62680912 Msa1260640:CDS
CGCGTTGCCAATTGTGCAGC+AGG 0.403571 8_2:+62678636 Msa1260640:CDS
AGAAGAAACAATTTGGTCCT+TGG 0.404497 8_2:-62678405 None:intergenic
TCCATGGTTGATGAGGCTAT+TGG 0.405151 8_2:-62680135 None:intergenic
GTGTAAGAGAAGAAACAATT+TGG 0.416534 8_2:-62678412 None:intergenic
TTTAGCTGTATCCGATATGA+TGG 0.420532 8_2:-62681702 None:intergenic
GCTAGAACGCTAACAGGGCT+TGG 0.427263 8_2:+62681282 Msa1260640:CDS
GCAGACTATTGATCAGGTTC+AGG 0.429751 8_2:+62678534 Msa1260640:CDS
TTCGAGGACTTGATTAATCA+AGG 0.430279 8_2:-62681561 None:intergenic
GTAGGGAGTGCTTTGAAGCC+TGG 0.435558 8_2:+62678604 Msa1260640:CDS
TTAGTTGCTAGTGGTTGGTT+TGG 0.438252 8_2:-62678184 None:intergenic
ACCGTGATTGCTGGAACAGC+TGG 0.442811 8_2:+62680180 Msa1260640:CDS
CTTGGCACCTTCAATCACCT+TGG 0.446939 8_2:-62680112 None:intergenic
TTTGTACCCGCGAAAATTGA+AGG 0.453201 8_2:-62680253 None:intergenic
TTGCCAATTGTGCAGCAGGC+TGG 0.454380 8_2:+62678640 Msa1260640:CDS
AAGAAGTGCCAAACAAAATA+CGG 0.454423 8_2:+62680812 Msa1260640:CDS
GGGTGGTTACAGAGTAGATT+AGG 0.455550 8_2:+62681351 Msa1260640:CDS
GAGAAGGATAAGGACAAATC+TGG 0.457337 8_2:+62680494 Msa1260640:CDS
ATTGATCAGGTTCAGGTGGT+TGG 0.466359 8_2:+62678541 Msa1260640:CDS
GTGGAAGGAGATGGAAGAGA+AGG 0.477837 8_2:-62678254 None:intergenic
GCAGCTCTAGCTTCATTTGG+AGG 0.478964 8_2:-62678371 None:intergenic
ACAAAATACGGGGACTGGTA+AGG 0.484660 8_2:+62680824 Msa1260640:CDS
GAAAAGAGCAAGTAGTGAAA+TGG 0.487604 8_2:-62678345 None:intergenic
CAAGAAGCACTTCAGAGCTC+TGG 0.489590 8_2:+62678718 Msa1260640:CDS
TTTCTGAGTAGATTGTCTGC+TGG 0.490373 8_2:-62681460 None:intergenic
CTACTCAGAAACTTCTACCT+GGG 0.491136 8_2:+62681472 Msa1260640:CDS
ATCAAATGAATATAATTTCG+AGG 0.494558 8_2:-62681577 None:intergenic
TTGGAAGCCTCAGAGAAGGC+TGG 0.503167 8_2:-62678688 None:intergenic
GGTGATTGTGTGAGGTAAAG+TGG 0.504202 8_2:-62678273 None:intergenic
CATTGTTAGTTGCTAGTGGT+TGG 0.506706 8_2:-62678189 None:intergenic
TGATGAAGTTATAGTTTCCA+TGG 0.511224 8_2:-62680151 None:intergenic
GGTGGAGCAGACTATTGATC+AGG 0.515034 8_2:+62678528 Msa1260640:intron
TGATACCCAAACTGCTGCTA+AGG 0.515675 8_2:+62678744 Msa1260640:CDS
CAAACAACCAAGGTGATTGA+AGG 0.517430 8_2:+62680105 Msa1260640:CDS
CTAGTGGCCGCCCATCATAT+CGG 0.518794 8_2:+62681691 Msa1260640:three_prime_UTR
CAGCTCTAGCTTCATTTGGA+GGG 0.518822 8_2:-62678370 None:intergenic
AAGGAGATGGCAGACCAGAT+AGG 0.519818 8_2:-62680234 None:intergenic
CTTCTCTGAGGCTTCCAAGA+AGG 0.520510 8_2:+62678693 Msa1260640:CDS
GGTTGATGAGGCTATTGGCT+TGG 0.522150 8_2:-62680130 None:intergenic
GGTAAGGAATGTGAAGAGAG+TGG 0.527256 8_2:+62680840 Msa1260640:CDS
AGTGATAATAAGGTGAGTTA+GGG 0.530343 8_2:-62681820 None:intergenic
TCTTCTGGAGGGATCAACAT+AGG 0.535284 8_2:-62681797 None:intergenic
CAACGTGTTGCTGAAGCTGT+AGG 0.541146 8_2:+62678586 Msa1260640:CDS
AGAAGTGCCAAACAAAATAC+GGG 0.543009 8_2:+62680813 Msa1260640:CDS
ATAATATAGGTACTCGGACT+CGG 0.543745 8_2:+62681248 Msa1260640:intron
CAAATACAAAGATGCTACAT+AGG 0.544430 8_2:+62678064 Msa1260640:five_prime_UTR
GCCAAACAAAATACGGGGAC+TGG 0.544882 8_2:+62680819 Msa1260640:CDS
GATTGATATTAGGTCAGAGA+AGG 0.545508 8_2:+62680478 Msa1260640:CDS
GGCAACGCGGTATCGAAGCC+AGG 0.545635 8_2:-62678622 None:intergenic
CGAGAGTTCAATGTTGAGTG+AGG 0.548439 8_2:-62681514 None:intergenic
TGAGGTAAAGTGGAAGGAGA+TGG 0.548724 8_2:-62678263 None:intergenic
CCACTCAAAGCGTGCACGAG+TGG 0.550539 8_2:-62681638 None:intergenic
TGTTGTTGGAAGTGAAGCCA+TGG 0.556108 8_2:-62678228 None:intergenic
AGCTCTAGCTTCATTTGGAG+GGG 0.557709 8_2:-62678369 None:intergenic
TTTAAGAACACATGGATCGT+TGG 0.558923 8_2:+62681306 Msa1260640:CDS
TTGCCATTGTTAGTTGCTAG+TGG 0.561348 8_2:-62678193 None:intergenic
CTTCTGGAGGGATCAACATA+GGG 0.561807 8_2:-62681796 None:intergenic
CCATCCAGAATCATCCCTGC+GGG 0.563020 8_2:+62681414 Msa1260640:CDS
TATAGTTTCCATGGTTGATG+AGG 0.563496 8_2:-62680142 None:intergenic
TATTAGGTCAGAGAAGGATA+AGG 0.566526 8_2:+62680484 Msa1260640:CDS
CCACTCGTGCACGCTTTGAG+TGG 0.568559 8_2:+62681638 Msa1260640:three_prime_UTR
AACGTGTTGCTGAAGCTGTA+GGG 0.570064 8_2:+62678587 Msa1260640:CDS
AACATATCAAGTGTTTGAGC+TGG 0.570805 8_2:-62680434 None:intergenic
TTAGCTGTATCCGATATGAT+GGG 0.573245 8_2:-62681701 None:intergenic
AGTTCCATGTTGTTTAATGG+TGG 0.573725 8_2:+62681733 Msa1260640:three_prime_UTR
AACACATGGATCGTTGGTGA+TGG 0.574713 8_2:+62681312 Msa1260640:CDS
GACTATTGATCAGGTTCAGG+TGG 0.574947 8_2:+62678537 Msa1260640:CDS
GGCAATGGAGATTACAGCCA+TGG 0.575193 8_2:+62678211 Msa1260640:CDS
TCTACTCAGAAACTTCTACC+TGG 0.575397 8_2:+62681471 Msa1260640:CDS
GTAGTGTGATTAGAGATGTG+TGG 0.576524 8_2:-62678122 None:intergenic
AATGCTATGCGTCTAAGTTG+AGG 0.576915 8_2:-62678308 None:intergenic
AAACCTCCTCTAACACCCGC+AGG 0.578027 8_2:-62681429 None:intergenic
AGTGAAATGGTGGTTGATGT+TGG 0.580317 8_2:-62678332 None:intergenic
TCCAGCTGTTCCAGCAATCA+CGG 0.582295 8_2:-62680181 None:intergenic
GTGAGTTAGGGTCTTCTGGA+GGG 0.583307 8_2:-62681808 None:intergenic
CCCGCGAAAATTGAAGGAGA+TGG 0.585114 8_2:-62680247 None:intergenic
ATCCCTGCGGGTGTTAGAGG+AGG 0.585652 8_2:+62681426 Msa1260640:CDS
ACGAGTGGAAGAGTTTAAAA+GGG 0.589356 8_2:-62681623 None:intergenic
CTAACCACCATTAAACAACA+TGG 0.592163 8_2:-62681737 None:intergenic
AAAGAATTTCAGTCAGCCCC+AGG 0.592968 8_2:-62681489 None:intergenic
GGCTTGGATTTAAGAACACA+TGG 0.597465 8_2:+62681298 Msa1260640:CDS
CTAGCAACTAACAATGGCAA+TGG 0.598628 8_2:+62678196 Msa1260640:exon
TGTGCAGCAGGCTGGACAAG+AGG 0.599418 8_2:+62678648 Msa1260640:CDS
TGCTTCTCCAGCCTTCTCTG+AGG 0.602112 8_2:+62678681 Msa1260640:CDS
CGAGTCCAAGATCACAATGT+TGG 0.602753 8_2:-62680917 None:intergenic
GCCAATAGCCTCATCAACCA+TGG 0.605727 8_2:+62680134 Msa1260640:CDS
TGTTTAATGGTGGTTAGTGA+AGG 0.608241 8_2:+62681743 Msa1260640:three_prime_UTR
CTTCTTGGAAGCCTCAGAGA+AGG 0.611514 8_2:-62678692 None:intergenic
GCTGTTCCAGCAATCACGGT+AGG 0.613560 8_2:-62680177 None:intergenic
AGCTGCTGTTAACATCTCCA+AGG 0.626049 8_2:+62678388 Msa1260640:CDS
CCCGCAGGGATGATTCTGGA+TGG 0.626626 8_2:-62681414 None:intergenic
GGTGAGTTAGGGTCTTCTGG+AGG 0.630568 8_2:-62681809 None:intergenic
GAGATGGCAGACCAGATAGG+AGG 0.635679 8_2:-62680231 None:intergenic
TTGCGATCCCCTAAAACTAG+TGG 0.637074 8_2:+62681675 Msa1260640:three_prime_UTR
AAGAGCAAGTAGTGAAATGG+TGG 0.643538 8_2:-62678342 None:intergenic
AACCTCCTCTAACACCCGCA+GGG 0.645720 8_2:-62681428 None:intergenic
CTGCTGCACAATTGGCAACG+CGG 0.645976 8_2:-62678635 None:intergenic
GATAAGGTGGTGATTGTGTG+AGG 0.648070 8_2:-62678281 None:intergenic
TTAGCACTAGACGGAAGGCG+AGG 0.649528 8_2:-62680521 None:intergenic
CAACCACTAGCAACTAACAA+TGG 0.650476 8_2:+62678190 Msa1260640:exon
ACACGTATAATATAGGTACT+CGG 0.651202 8_2:+62681242 Msa1260640:intron
AACATCATCACCATTCCACG+TGG 0.654292 8_2:-62678034 None:intergenic
TACTCAGAAACTTCTACCTG+GGG 0.659837 8_2:+62681473 Msa1260640:CDS
TAGGGATTAGACTGATAACA+AGG 0.665432 8_2:-62681778 None:intergenic
TATCTGAAGAAAATCAACAA+AGG 0.667456 8_2:+62680892 Msa1260640:CDS
ATTGTGTGAGGTAAAGTGGA+AGG 0.668375 8_2:-62678269 None:intergenic
ACCAGATAGGAGGAAACAAG+AGG 0.669558 8_2:-62680221 None:intergenic
ACCATCCAGAATCATCCCTG+CGG 0.672991 8_2:+62681413 Msa1260640:CDS
TTTAATGTCAAGTACACACA+TGG 0.677420 8_2:-62681843 None:intergenic
TAGTTGCTAGAACGCTAACA+GGG 0.678340 8_2:+62681277 Msa1260640:CDS
TTGATGATAGAAGAGTGAAG+TGG 0.684018 8_2:-62678161 None:intergenic
TGCTGCACAACAAACAACCA+AGG 0.684435 8_2:+62680095 Msa1260640:CDS
GCTGTATCCGATATGATGGG+CGG 0.703254 8_2:-62681698 None:intergenic
GAAGTGCCAAACAAAATACG+GGG 0.750558 8_2:+62680814 Msa1260640:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAAATTTATTATGCAAA+CGG - chr8_2:62678802-62678821 None:intergenic 10.0%
!!! AATGATTTTTTTTAGCAAAA+TGG - chr8_2:62678987-62679006 None:intergenic 15.0%
!! ACACTATAAAAAAAAAAGTT+GGG - chr8_2:62681198-62681217 None:intergenic 15.0%
!! AACACTATAAAAAAAAAAGT+TGG - chr8_2:62681199-62681218 None:intergenic 15.0%
!!! AAATTGCATTTCTAGTTAAA+GGG - chr8_2:62678496-62678515 None:intergenic 20.0%
!!! AAAATTGCATTTCTAGTTAA+AGG - chr8_2:62678497-62678516 None:intergenic 20.0%
!!! ATGCAATTTTTTTTTTATGC+AGG + chr8_2:62678507-62678526 Msa1260640:intron 20.0%
!!! ATGATAATTAAGTGTTTTTG+TGG + chr8_2:62678835-62678854 Msa1260640:intron 20.0%
!! ATCTCTATAACAAAAGATAA+AGG + chr8_2:62678863-62678882 Msa1260640:intron 20.0%
!! TCTCTATAACAAAAGATAAA+GGG + chr8_2:62678864-62678883 Msa1260640:intron 20.0%
!! AAAAAAAATCCAAAACAAAC+AGG - chr8_2:62678890-62678909 None:intergenic 20.0%
!!! TGAAATAGATTTTCATTTTG+AGG - chr8_2:62679015-62679034 None:intergenic 20.0%
!!! TCTATTTTTTTCTTAATGCA+AGG + chr8_2:62679051-62679070 Msa1260640:intron 20.0%
!! TAACTTACATAAAAACAGTT+TGG - chr8_2:62679242-62679261 None:intergenic 20.0%
!!! TAATGTGCTAAATAAACTTT+TGG + chr8_2:62679572-62679591 Msa1260640:intron 20.0%
!!! AATGTGCTAAATAAACTTTT+GGG + chr8_2:62679573-62679592 Msa1260640:intron 20.0%
!!! TTTATGTCTTTGGTTTTATA+TGG + chr8_2:62679619-62679638 Msa1260640:intron 20.0%
!! ATCAGATTGATAAATTAACT+TGG - chr8_2:62680041-62680060 None:intergenic 20.0%
!! GTTAATTTATCAATCTGATT+CGG + chr8_2:62680042-62680061 Msa1260640:intron 20.0%
!!! ACTACATTTTGATTGATATT+AGG + chr8_2:62680468-62680487 Msa1260640:CDS 20.0%
!! AAGTTTATTACAATGAGTAT+AGG - chr8_2:62680718-62680737 None:intergenic 20.0%
!! AATAGTAAGATAGATTTGAA+AGG - chr8_2:62680950-62680969 None:intergenic 20.0%
!!! TTCAATACTTATTAACTTGT+TGG + chr8_2:62681131-62681150 Msa1260640:intron 20.0%
!!! TCAATACTTATTAACTTGTT+GGG + chr8_2:62681132-62681151 Msa1260640:intron 20.0%
!! ATCAAATGAATATAATTTCG+AGG - chr8_2:62681580-62681599 None:intergenic 20.0%
! TTTGGAGGAGAATATAATTT+GGG - chr8_2:62678005-62678024 None:intergenic 25.0%
!!! TTTTGGAGGAGAATATAATT+TGG - chr8_2:62678006-62678025 None:intergenic 25.0%
! CTTGTTAAAGTTAGAAACTT+TGG - chr8_2:62678453-62678472 None:intergenic 25.0%
!!! CAATTTTTTTTTTATGCAGG+TGG + chr8_2:62678510-62678529 Msa1260640:intron 25.0%
!!! AAACAGTTTGGCTTTATTTT+GGG - chr8_2:62679230-62679249 None:intergenic 25.0%
!!! AAAACAGTTTGGCTTTATTT+TGG - chr8_2:62679231-62679250 None:intergenic 25.0%
! ACTTATATTCTTAAGCTCTT+CGG - chr8_2:62679287-62679306 None:intergenic 25.0%
!!! TATTTGAGACCAATTTTATC+CGG + chr8_2:62679432-62679451 Msa1260640:intron 25.0%
! GCAATGTTAGTTAACATTTA+GGG + chr8_2:62679501-62679520 Msa1260640:intron 25.0%
! CAATGTTAGTTAACATTTAG+GGG + chr8_2:62679502-62679521 Msa1260640:intron 25.0%
! GGAAAGTGATAGTATAAAAA+TGG - chr8_2:62679693-62679712 None:intergenic 25.0%
! CAATTATAATACTCCAAAAG+TGG - chr8_2:62679925-62679944 None:intergenic 25.0%
!! GAAAAATGTTGTTTGACATA+AGG - chr8_2:62680370-62680389 None:intergenic 25.0%
! AATTTGTATTTAGATTCTCG+TGG + chr8_2:62680600-62680619 Msa1260640:intron 25.0%
! ATAATAACTGATCATAACGA+AGG - chr8_2:62680681-62680700 None:intergenic 25.0%
! TATCTGAAGAAAATCAACAA+AGG + chr8_2:62680892-62680911 Msa1260640:CDS 25.0%
!! ATCATTTTCAGTTCACTATA+TGG + chr8_2:62680975-62680994 Msa1260640:intron 25.0%
! TTTCTCAAATTATCAAGTGT+CGG - chr8_2:62681040-62681059 None:intergenic 25.0%
! TTAGACAACACGTATAATAT+AGG + chr8_2:62681235-62681254 Msa1260640:intron 25.0%
ATGTAGCATCTTTGTATTTG+AGG - chr8_2:62678064-62678083 None:intergenic 30.0%
CAAATACAAAGATGCTACAT+AGG + chr8_2:62678064-62678083 Msa1260640:five_prime_UTR 30.0%
!! TCTAAGTTGAGGTTTTGATA+AGG - chr8_2:62678300-62678319 None:intergenic 30.0%
GTGTAAGAGAAGAAACAATT+TGG - chr8_2:62678415-62678434 None:intergenic 30.0%
TTGCTTAATTCATTCAGTCT+TGG + chr8_2:62678768-62678787 Msa1260640:intron 30.0%
TGCTTAATTCATTCAGTCTT+GGG + chr8_2:62678769-62678788 Msa1260640:intron 30.0%
CATTATCAACCGGATAAAAT+TGG - chr8_2:62679444-62679463 None:intergenic 30.0%
AAGCAAATGTCATTATCAAC+CGG - chr8_2:62679454-62679473 None:intergenic 30.0%
!! GTTGATAATGACATTTGCTT+TGG + chr8_2:62679454-62679473 Msa1260640:intron 30.0%
GGCAATGTTAGTTAACATTT+AGG + chr8_2:62679500-62679519 Msa1260640:intron 30.0%
TAGCACATTATAGCTCAAAT+AGG - chr8_2:62679562-62679581 None:intergenic 30.0%
TGAATGGAAAGCAATTATGA+GGG + chr8_2:62679649-62679668 Msa1260640:intron 30.0%
AACATTTATCCACACACTAA+CGG - chr8_2:62679734-62679753 None:intergenic 30.0%
!! TCATCTTTGATTTTAGACAG+TGG + chr8_2:62680068-62680087 Msa1260640:intron 30.0%
TGATGAAGTTATAGTTTCCA+TGG - chr8_2:62680154-62680173 None:intergenic 30.0%
! GCAAATTTTGTGCTTCTATA+TGG + chr8_2:62680304-62680323 Msa1260640:intron 30.0%
!!! ATCTTGTTTTTAGCACTAGA+CGG - chr8_2:62680533-62680552 None:intergenic 30.0%
GGCAACAAATCTTAACTTAA+AGG - chr8_2:62680660-62680679 None:intergenic 30.0%
!! AAGAAGTGCCAAACAAAATA+CGG + chr8_2:62680812-62680831 Msa1260640:CDS 30.0%
! ATTTTCAGTTCACTATATGG+CGG + chr8_2:62680978-62680997 Msa1260640:intron 30.0%
ACACGTATAATATAGGTACT+CGG + chr8_2:62681242-62681261 Msa1260640:intron 30.0%
! GTATAAATTTTCGTTTGCAG+AGG + chr8_2:62681383-62681402 Msa1260640:CDS 30.0%
! TCAAGTTCCATGTTGTTTAA+TGG + chr8_2:62681730-62681749 Msa1260640:three_prime_UTR 30.0%
AGTGATAATAAGGTGAGTTA+GGG - chr8_2:62681823-62681842 None:intergenic 30.0%
TTTAATGTCAAGTACACACA+TGG - chr8_2:62681846-62681865 None:intergenic 30.0%
TTGATGGGAAAATTCTACTA+TGG - chr8_2:62681883-62681902 None:intergenic 30.0%
!!! ACGTGGATTTTTTGTTTTGG+AGG - chr8_2:62678020-62678039 None:intergenic 35.0%
TCCAAAACAAAAAATCCACG+TGG + chr8_2:62678019-62678038 Msa1260640:five_prime_UTR 35.0%
!!! TCCACGTGGATTTTTTGTTT+TGG - chr8_2:62678023-62678042 None:intergenic 35.0%
AACAAAAAATCCACGTGGAA+TGG + chr8_2:62678024-62678043 Msa1260640:five_prime_UTR 35.0%
! TTGATGATAGAAGAGTGAAG+TGG - chr8_2:62678164-62678183 None:intergenic 35.0%
!! AAGTTGAGGTTTTGATAAGG+TGG - chr8_2:62678297-62678316 None:intergenic 35.0%
GAAAAGAGCAAGTAGTGAAA+TGG - chr8_2:62678348-62678367 None:intergenic 35.0%
AGAAGAAACAATTTGGTCCT+TGG - chr8_2:62678408-62678427 None:intergenic 35.0%
AATTCATTCAGTCTTGGGAT+TGG + chr8_2:62678774-62678793 Msa1260640:intron 35.0%
ATTCATTCAGTCTTGGGATT+GGG + chr8_2:62678775-62678794 Msa1260640:intron 35.0%
AATCTCACAAGTGTTTATGC+TGG + chr8_2:62679365-62679384 Msa1260640:intron 35.0%
ACATTTATCTGTGGCATACA+TGG + chr8_2:62679479-62679498 Msa1260640:intron 35.0%
! GACATAAAGAGTGTGTGTAT+GGG - chr8_2:62679607-62679626 None:intergenic 35.0%
! AGACATAAAGAGTGTGTGTA+TGG - chr8_2:62679608-62679627 None:intergenic 35.0%
ACACACACTCTTTATGTCTT+TGG + chr8_2:62679609-62679628 Msa1260640:intron 35.0%
!!! CTTTGGTTTTATATGGTCAC+CGG + chr8_2:62679626-62679645 Msa1260640:intron 35.0%
CATAATTGCTTTCCATTCAC+CGG - chr8_2:62679648-62679667 None:intergenic 35.0%
GTGAATGGAAAGCAATTATG+AGG + chr8_2:62679648-62679667 Msa1260640:intron 35.0%
TTTATACTGTCACATGCCTT+TGG + chr8_2:62679752-62679771 Msa1260640:intron 35.0%
TGATATACTTTCACGTGAAC+TGG + chr8_2:62679787-62679806 Msa1260640:intron 35.0%
GCAGCATCTAGTTAGATATT+TGG - chr8_2:62679845-62679864 None:intergenic 35.0%
!! GAATTTGCTTGTTCCACTTT+TGG + chr8_2:62679909-62679928 Msa1260640:intron 35.0%
! TATAGTTTCCATGGTTGATG+AGG - chr8_2:62680145-62680164 None:intergenic 35.0%
TTTGCATCAAAGCATGTCAA+GGG - chr8_2:62680289-62680308 None:intergenic 35.0%
ATTTGCATCAAAGCATGTCA+AGG - chr8_2:62680290-62680309 None:intergenic 35.0%
GAAAATTCACAAGGTCATGA+TGG - chr8_2:62680342-62680361 None:intergenic 35.0%
AAGGAGCTTGAAAATTCACA+AGG - chr8_2:62680351-62680370 None:intergenic 35.0%
AACATATCAAGTGTTTGAGC+TGG - chr8_2:62680437-62680456 None:intergenic 35.0%
GATTGATATTAGGTCAGAGA+AGG + chr8_2:62680478-62680497 Msa1260640:CDS 35.0%
TATTAGGTCAGAGAAGGATA+AGG + chr8_2:62680484-62680503 Msa1260640:CDS 35.0%
GTCTAGTGCTAAAAACAAGA+TGG + chr8_2:62680532-62680551 Msa1260640:CDS 35.0%
AGATAGAGGTAAGACACTTA+CGG - chr8_2:62680566-62680585 None:intergenic 35.0%
GTAGTATGAGTACTAGATAG+AGG - chr8_2:62680580-62680599 None:intergenic 35.0%
!! GCTTTGATTTGAACTCAGAT+TGG + chr8_2:62680789-62680808 Msa1260640:intron 35.0%
!! AGAAGTGCCAAACAAAATAC+GGG + chr8_2:62680813-62680832 Msa1260640:CDS 35.0%
ATAATATAGGTACTCGGACT+CGG + chr8_2:62681248-62681267 Msa1260640:intron 35.0%
TTTAAGAACACATGGATCGT+TGG + chr8_2:62681306-62681325 Msa1260640:CDS 35.0%
TTCGAGGACTTGATTAATCA+AGG - chr8_2:62681564-62681583 None:intergenic 35.0%
ACGAGTGGAAGAGTTTAAAA+GGG - chr8_2:62681626-62681645 None:intergenic 35.0%
TTAGCTGTATCCGATATGAT+GGG - chr8_2:62681704-62681723 None:intergenic 35.0%
TTTAGCTGTATCCGATATGA+TGG - chr8_2:62681705-62681724 None:intergenic 35.0%
! AGTTCCATGTTGTTTAATGG+TGG + chr8_2:62681733-62681752 Msa1260640:three_prime_UTR 35.0%
CTAACCACCATTAAACAACA+TGG - chr8_2:62681740-62681759 None:intergenic 35.0%
TGTTTAATGGTGGTTAGTGA+AGG + chr8_2:62681743-62681762 Msa1260640:three_prime_UTR 35.0%
TAGGGATTAGACTGATAACA+AGG - chr8_2:62681781-62681800 None:intergenic 35.0%
GAGTGATAATAAGGTGAGTT+AGG - chr8_2:62681824-62681843 None:intergenic 35.0%
ACACACATGGAGTGATAATA+AGG - chr8_2:62681833-62681852 None:intergenic 35.0%
GTAGTGTGATTAGAGATGTG+TGG - chr8_2:62678125-62678144 None:intergenic 40.0%
! TTAGTTGCTAGTGGTTGGTT+TGG - chr8_2:62678187-62678206 None:intergenic 40.0%
CATTGTTAGTTGCTAGTGGT+TGG - chr8_2:62678192-62678211 None:intergenic 40.0%
CAACCACTAGCAACTAACAA+TGG + chr8_2:62678190-62678209 Msa1260640:exon 40.0%
TTGCCATTGTTAGTTGCTAG+TGG - chr8_2:62678196-62678215 None:intergenic 40.0%
CTAGCAACTAACAATGGCAA+TGG + chr8_2:62678196-62678215 Msa1260640:exon 40.0%
!!! GGAAGAGAAGGTTTTGTTGT+TGG - chr8_2:62678245-62678264 None:intergenic 40.0%
ATTGTGTGAGGTAAAGTGGA+AGG - chr8_2:62678272-62678291 None:intergenic 40.0%
AATGCTATGCGTCTAAGTTG+AGG - chr8_2:62678311-62678330 None:intergenic 40.0%
! AGTGAAATGGTGGTTGATGT+TGG - chr8_2:62678335-62678354 None:intergenic 40.0%
AAGAGCAAGTAGTGAAATGG+TGG - chr8_2:62678345-62678364 None:intergenic 40.0%
! AAGGGCATGCATGTAAATGA+AGG - chr8_2:62678478-62678497 None:intergenic 40.0%
! GATAAAGGGCCTGTTTGTTT+TGG + chr8_2:62678878-62678897 Msa1260640:intron 40.0%
GCTTTGGCAACATTTATCTG+TGG + chr8_2:62679470-62679489 Msa1260640:intron 40.0%
! AAGAGTGTGTGTATGGGATT+TGG - chr8_2:62679601-62679620 None:intergenic 40.0%
TTTATATGGTCACCGGTGAA+TGG + chr8_2:62679633-62679652 Msa1260640:intron 40.0%
GAAAGCAATTATGAGGGTGA+GGG + chr8_2:62679655-62679674 Msa1260640:intron 40.0%
! ACATGCCTTTGGAGAGATTT+GGG + chr8_2:62679763-62679782 Msa1260640:intron 40.0%
ATCAACCCAAATCTCTCCAA+AGG - chr8_2:62679771-62679790 None:intergenic 40.0%
CAAACAACCAAGGTGATTGA+AGG + chr8_2:62680105-62680124 Msa1260640:CDS 40.0%
TTTGTACCCGCGAAAATTGA+AGG - chr8_2:62680256-62680275 None:intergenic 40.0%
! TTCAATTTTCGCGGGTACAA+AGG + chr8_2:62680255-62680274 Msa1260640:CDS 40.0%
! GATGCATGTGTTTTCTTTGC+AGG + chr8_2:62680401-62680420 Msa1260640:intron 40.0%
GAGAAGGATAAGGACAAATC+TGG + chr8_2:62680494-62680513 Msa1260640:CDS 40.0%
!!! TGTTTTTAGCACTAGACGGA+AGG - chr8_2:62680529-62680548 None:intergenic 40.0%
AGCATGAGCATCACTTCTTA+TGG + chr8_2:62680767-62680786 Msa1260640:intron 40.0%
! GAAGTGCCAAACAAAATACG+GGG + chr8_2:62680814-62680833 Msa1260640:CDS 40.0%
TTATCTACGAGACACAGACT+CGG + chr8_2:62681005-62681024 Msa1260640:intron 40.0%
!! CTCAAATTATCAAGTGTCGG+TGG - chr8_2:62681037-62681056 None:intergenic 40.0%
TTGAATGTAACCTCACGTGT+CGG + chr8_2:62681069-62681088 Msa1260640:intron 40.0%
ATAGTTGCTAGAACGCTAAC+AGG + chr8_2:62681276-62681295 Msa1260640:CDS 40.0%
TAGTTGCTAGAACGCTAACA+GGG + chr8_2:62681277-62681296 Msa1260640:CDS 40.0%
GGCTTGGATTTAAGAACACA+TGG + chr8_2:62681298-62681317 Msa1260640:CDS 40.0%
TTTCTGAGTAGATTGTCTGC+TGG - chr8_2:62681463-62681482 None:intergenic 40.0%
TCTACTCAGAAACTTCTACC+TGG + chr8_2:62681471-62681490 Msa1260640:CDS 40.0%
CTACTCAGAAACTTCTACCT+GGG + chr8_2:62681472-62681491 Msa1260640:CDS 40.0%
TACTCAGAAACTTCTACCTG+GGG + chr8_2:62681473-62681492 Msa1260640:CDS 40.0%
CACGAGTGGAAGAGTTTAAA+AGG - chr8_2:62681627-62681646 None:intergenic 40.0%
AACATCATCACCATTCCACG+TGG - chr8_2:62678037-62678056 None:intergenic 45.0%
TGTTGTTGGAAGTGAAGCCA+TGG - chr8_2:62678231-62678250 None:intergenic 45.0%
TGAGGTAAAGTGGAAGGAGA+TGG - chr8_2:62678266-62678285 None:intergenic 45.0%
GGTGATTGTGTGAGGTAAAG+TGG - chr8_2:62678276-62678295 None:intergenic 45.0%
GATAAGGTGGTGATTGTGTG+AGG - chr8_2:62678284-62678303 None:intergenic 45.0%
! AGCTCTAGCTTCATTTGGAG+GGG - chr8_2:62678372-62678391 None:intergenic 45.0%
! CAGCTCTAGCTTCATTTGGA+GGG - chr8_2:62678373-62678392 None:intergenic 45.0%
! ACAGCAGCTCTAGCTTCATT+TGG - chr8_2:62678377-62678396 None:intergenic 45.0%
AGCTGCTGTTAACATCTCCA+AGG + chr8_2:62678388-62678407 Msa1260640:CDS 45.0%
GCAGACTATTGATCAGGTTC+AGG + chr8_2:62678534-62678553 Msa1260640:CDS 45.0%
GACTATTGATCAGGTTCAGG+TGG + chr8_2:62678537-62678556 Msa1260640:CDS 45.0%
ATTGATCAGGTTCAGGTGGT+TGG + chr8_2:62678541-62678560 Msa1260640:CDS 45.0%
!!! GGTGGTTGGTTCTGGTTTTT+TGG + chr8_2:62678555-62678574 Msa1260640:CDS 45.0%
! AACGTGTTGCTGAAGCTGTA+GGG + chr8_2:62678587-62678606 Msa1260640:CDS 45.0%
AAGTGCTTCTTGAGCCTTCT+TGG - chr8_2:62678710-62678729 None:intergenic 45.0%
TGATACCCAAACTGCTGCTA+AGG + chr8_2:62678744-62678763 Msa1260640:CDS 45.0%
GCAAACCTTAGCAGCAGTTT+GGG - chr8_2:62678752-62678771 None:intergenic 45.0%
AGCAAACCTTAGCAGCAGTT+TGG - chr8_2:62678753-62678772 None:intergenic 45.0%
GGAAAGCAATTATGAGGGTG+AGG + chr8_2:62679654-62679673 Msa1260640:intron 45.0%
TTATCCACACACTAACGGTG+CGG - chr8_2:62679729-62679748 None:intergenic 45.0%
! CACATGCCTTTGGAGAGATT+TGG + chr8_2:62679762-62679781 Msa1260640:intron 45.0%
TGCTGCACAACAAACAACCA+AGG + chr8_2:62680095-62680114 Msa1260640:CDS 45.0%
!! TCCATGGTTGATGAGGCTAT+TGG - chr8_2:62680138-62680157 None:intergenic 45.0%
! ACCTCTTGTTTCCTCCTATC+TGG + chr8_2:62680220-62680239 Msa1260640:CDS 45.0%
ACCAGATAGGAGGAAACAAG+AGG - chr8_2:62680224-62680243 None:intergenic 45.0%
! GCCATCTCCTTCAATTTTCG+CGG + chr8_2:62680246-62680265 Msa1260640:CDS 45.0%
! CCATCTCCTTCAATTTTCGC+GGG + chr8_2:62680247-62680266 Msa1260640:CDS 45.0%
GAGGTAAGACACTTACGGAA+TGG - chr8_2:62680561-62680580 None:intergenic 45.0%
! ACCAGTCCCCGTATTTTGTT+TGG - chr8_2:62680823-62680842 None:intergenic 45.0%
! ACAAAATACGGGGACTGGTA+AGG + chr8_2:62680824-62680843 Msa1260640:CDS 45.0%
GGTAAGGAATGTGAAGAGAG+TGG + chr8_2:62680840-62680859 Msa1260640:CDS 45.0%
AGGCACCAACATTGTGATCT+TGG + chr8_2:62680912-62680931 Msa1260640:CDS 45.0%
CGAGTCCAAGATCACAATGT+TGG - chr8_2:62680920-62680939 None:intergenic 45.0%
CATTGTGATCTTGGACTCGT+AGG + chr8_2:62680921-62680940 Msa1260640:intron 45.0%
AAATGCTAACAAGTGCCCCA+GGG - chr8_2:62681174-62681193 None:intergenic 45.0%
AAAATGCTAACAAGTGCCCC+AGG - chr8_2:62681175-62681194 None:intergenic 45.0%
! AACACATGGATCGTTGGTGA+TGG + chr8_2:62681312-62681331 Msa1260640:CDS 45.0%
!!! ATCGTTGGTGATGGCTTTTC+TGG + chr8_2:62681321-62681340 Msa1260640:CDS 45.0%
!! ATGGCTTTTCTGGAGGCAAA+GGG + chr8_2:62681331-62681350 Msa1260640:CDS 45.0%
GGGTGGTTACAGAGTAGATT+AGG + chr8_2:62681351-62681370 Msa1260640:CDS 45.0%
AAAGAATTTCAGTCAGCCCC+AGG - chr8_2:62681492-62681511 None:intergenic 45.0%
CGAGAGTTCAATGTTGAGTG+AGG - chr8_2:62681517-62681536 None:intergenic 45.0%
TTGCGATCCCCTAAAACTAG+TGG + chr8_2:62681675-62681694 Msa1260640:three_prime_UTR 45.0%
! CTTCTGGAGGGATCAACATA+GGG - chr8_2:62681799-62681818 None:intergenic 45.0%
! TCTTCTGGAGGGATCAACAT+AGG - chr8_2:62681800-62681819 None:intergenic 45.0%
TAAGGTGAGTTAGGGTCTTC+TGG - chr8_2:62681815-62681834 None:intergenic 45.0%
GGCAATGGAGATTACAGCCA+TGG + chr8_2:62678211-62678230 Msa1260640:CDS 50.0%
GTGGAAGGAGATGGAAGAGA+AGG - chr8_2:62678257-62678276 None:intergenic 50.0%
! GCAGCTCTAGCTTCATTTGG+AGG - chr8_2:62678374-62678393 None:intergenic 50.0%
GGTGGAGCAGACTATTGATC+AGG + chr8_2:62678528-62678547 Msa1260640:intron 50.0%
! CAACGTGTTGCTGAAGCTGT+AGG + chr8_2:62678586-62678605 Msa1260640:CDS 50.0%
CTTCTTGGAAGCCTCAGAGA+AGG - chr8_2:62678695-62678714 None:intergenic 50.0%
!! CTTCTCTGAGGCTTCCAAGA+AGG + chr8_2:62678693-62678712 Msa1260640:CDS 50.0%
!! CAAGAAGCACTTCAGAGCTC+TGG + chr8_2:62678718-62678737 Msa1260640:CDS 50.0%
GCAATTATGAGGGTGAGGGT+TGG + chr8_2:62679659-62679678 Msa1260640:intron 50.0%
CTTGGCACCTTCAATCACCT+TGG - chr8_2:62680115-62680134 None:intergenic 50.0%
!! GGTTGATGAGGCTATTGGCT+TGG - chr8_2:62680133-62680152 None:intergenic 50.0%
GCCAATAGCCTCATCAACCA+TGG + chr8_2:62680134-62680153 Msa1260640:CDS 50.0%
TCAGATCCTACCGTGATTGC+TGG + chr8_2:62680171-62680190 Msa1260640:CDS 50.0%
TCCAGCTGTTCCAGCAATCA+CGG - chr8_2:62680184-62680203 None:intergenic 50.0%
AAGGAGATGGCAGACCAGAT+AGG - chr8_2:62680237-62680256 None:intergenic 50.0%
CCCGCGAAAATTGAAGGAGA+TGG - chr8_2:62680250-62680269 None:intergenic 50.0%
GCCAAACAAAATACGGGGAC+TGG + chr8_2:62680819-62680838 Msa1260640:CDS 50.0%
TCATGCTTACTAGTGCCCCT+GGG + chr8_2:62681155-62681174 Msa1260640:intron 50.0%
AATGCTAACAAGTGCCCCAG+GGG - chr8_2:62681173-62681192 None:intergenic 50.0%
!!! GTTGGTGATGGCTTTTCTGG+AGG + chr8_2:62681324-62681343 Msa1260640:CDS 50.0%
!! GATGGCTTTTCTGGAGGCAA+AGG + chr8_2:62681330-62681349 Msa1260640:CDS 50.0%
ACCATCCAGAATCATCCCTG+CGG + chr8_2:62681413-62681432 Msa1260640:CDS 50.0%
!!! ATGGGCGGCCACTAGTTTTA+GGG - chr8_2:62681686-62681705 None:intergenic 50.0%
! GCTGTATCCGATATGATGGG+CGG - chr8_2:62681701-62681720 None:intergenic 50.0%
GTGAGTTAGGGTCTTCTGGA+GGG - chr8_2:62681811-62681830 None:intergenic 50.0%
! CAGGTTCAGGTGGTTGGTTC+TGG + chr8_2:62678547-62678566 Msa1260640:CDS 55.0%
!! GTAGGGAGTGCTTTGAAGCC+TGG + chr8_2:62678604-62678623 Msa1260640:CDS 55.0%
CTGCTGCACAATTGGCAACG+CGG - chr8_2:62678638-62678657 None:intergenic 55.0%
TTGCCAATTGTGCAGCAGGC+TGG + chr8_2:62678640-62678659 Msa1260640:CDS 55.0%
TGTCCAGCCTGCTGCACAAT+TGG - chr8_2:62678646-62678665 None:intergenic 55.0%
TGCTTCTCCAGCCTTCTCTG+AGG + chr8_2:62678681-62678700 Msa1260640:CDS 55.0%
TTGGAAGCCTCAGAGAAGGC+TGG - chr8_2:62678691-62678710 None:intergenic 55.0%
!! TGAGGGTGAGGGTTGGTTTC+AGG + chr8_2:62679666-62679685 Msa1260640:intron 55.0%
CACACTAACGGTGCGGTTAG+TGG - chr8_2:62679722-62679741 None:intergenic 55.0%
CTAACCGCACCGTTAGTGTG+TGG + chr8_2:62679722-62679741 Msa1260640:intron 55.0%
GCTGTTCCAGCAATCACGGT+AGG - chr8_2:62680180-62680199 None:intergenic 55.0%
ACCGTGATTGCTGGAACAGC+TGG + chr8_2:62680180-62680199 Msa1260640:CDS 55.0%
GAGATGGCAGACCAGATAGG+AGG - chr8_2:62680234-62680253 None:intergenic 55.0%
TTAGCACTAGACGGAAGGCG+AGG - chr8_2:62680524-62680543 None:intergenic 55.0%
TGACATGACACCGACACGTG+AGG - chr8_2:62681082-62681101 None:intergenic 55.0%
GTCATGCTTACTAGTGCCCC+TGG + chr8_2:62681154-62681173 Msa1260640:intron 55.0%
CATGCTTACTAGTGCCCCTG+GGG + chr8_2:62681156-62681175 Msa1260640:intron 55.0%
GCTAGAACGCTAACAGGGCT+TGG + chr8_2:62681282-62681301 Msa1260640:CDS 55.0%
!! GCTTTTCTGGAGGCAAAGGG+TGG + chr8_2:62681334-62681353 Msa1260640:CDS 55.0%
CCATCCAGAATCATCCCTGC+GGG + chr8_2:62681414-62681433 Msa1260640:CDS 55.0%
AACACCCGCAGGGATGATTC+TGG - chr8_2:62681421-62681440 None:intergenic 55.0%
ATCATCCCTGCGGGTGTTAG+AGG + chr8_2:62681423-62681442 Msa1260640:CDS 55.0%
AACCTCCTCTAACACCCGCA+GGG - chr8_2:62681431-62681450 None:intergenic 55.0%
AAACCTCCTCTAACACCCGC+AGG - chr8_2:62681432-62681451 None:intergenic 55.0%
! GCGGGTGTTAGAGGAGGTTT+TGG + chr8_2:62681432-62681451 Msa1260640:CDS 55.0%
!!! TGGGCGGCCACTAGTTTTAG+GGG - chr8_2:62681685-62681704 None:intergenic 55.0%
!!! GATGGGCGGCCACTAGTTTT+AGG - chr8_2:62681687-62681706 None:intergenic 55.0%
CTAGTGGCCGCCCATCATAT+CGG + chr8_2:62681691-62681710 Msa1260640:three_prime_UTR 55.0%
GGTGAGTTAGGGTCTTCTGG+AGG - chr8_2:62681812-62681831 None:intergenic 55.0%
CGCGTTGCCAATTGTGCAGC+AGG + chr8_2:62678636-62678655 Msa1260640:CDS 60.0%
TGTGCAGCAGGCTGGACAAG+AGG + chr8_2:62678648-62678667 Msa1260640:CDS 60.0%
CGGTGCGGTTAGTGGTGCAA+TGG - chr8_2:62679714-62679733 None:intergenic 60.0%
CCCGCAGGGATGATTCTGGA+TGG - chr8_2:62681417-62681436 None:intergenic 60.0%
ATCCCTGCGGGTGTTAGAGG+AGG + chr8_2:62681426-62681445 Msa1260640:CDS 60.0%
CCACTCAAAGCGTGCACGAG+TGG - chr8_2:62681641-62681660 None:intergenic 60.0%
! CCACTCGTGCACGCTTTGAG+TGG + chr8_2:62681638-62681657 Msa1260640:three_prime_UTR 60.0%
! GGCAACGCGGTATCGAAGCC+AGG - chr8_2:62678625-62678644 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 62678002 62681910 62678002 ID=Msa1260640;Name=Msa1260640
chr8_2 mRNA 62678002 62681910 62678002 ID=Msa1260640-mRNA-1;Parent=Msa1260640;Name=Msa1260640-mRNA-1;_AED=0.02;_eAED=0.02;_QI=207|1|1|1|1|1|6|407|392
chr8_2 exon 62678002 62678436 62678002 ID=Msa1260640-mRNA-1:exon:19884;Parent=Msa1260640-mRNA-1
chr8_2 exon 62678529 62678765 62678529 ID=Msa1260640-mRNA-1:exon:19885;Parent=Msa1260640-mRNA-1
chr8_2 exon 62680084 62680276 62680084 ID=Msa1260640-mRNA-1:exon:19886;Parent=Msa1260640-mRNA-1
chr8_2 exon 62680423 62680564 62680423 ID=Msa1260640-mRNA-1:exon:19887;Parent=Msa1260640-mRNA-1
chr8_2 exon 62680807 62680938 62680807 ID=Msa1260640-mRNA-1:exon:19888;Parent=Msa1260640-mRNA-1
chr8_2 exon 62681257 62681910 62681257 ID=Msa1260640-mRNA-1:exon:19889;Parent=Msa1260640-mRNA-1
chr8_2 five_prime_UTR 62678002 62678208 62678002 ID=Msa1260640-mRNA-1:five_prime_utr;Parent=Msa1260640-mRNA-1
chr8_2 CDS 62678209 62678436 62678209 ID=Msa1260640-mRNA-1:cds;Parent=Msa1260640-mRNA-1
chr8_2 CDS 62678529 62678765 62678529 ID=Msa1260640-mRNA-1:cds;Parent=Msa1260640-mRNA-1
chr8_2 CDS 62680084 62680276 62680084 ID=Msa1260640-mRNA-1:cds;Parent=Msa1260640-mRNA-1
chr8_2 CDS 62680423 62680564 62680423 ID=Msa1260640-mRNA-1:cds;Parent=Msa1260640-mRNA-1
chr8_2 CDS 62680807 62680938 62680807 ID=Msa1260640-mRNA-1:cds;Parent=Msa1260640-mRNA-1
chr8_2 CDS 62681257 62681503 62681257 ID=Msa1260640-mRNA-1:cds;Parent=Msa1260640-mRNA-1
chr8_2 three_prime_UTR 62681504 62681910 62681504 ID=Msa1260640-mRNA-1:three_prime_utr;Parent=Msa1260640-mRNA-1
Gene Sequence

>Msa1260640

ATGGCAATGGAGATTACAGCCATGGCTTCACTTCCAACAACAAAACCTTCTCTTCCATCTCCTTCCACTTTACCTCACACAATCACCACCTTATCAAAACCTCAACTTAGACGCATAGCATTACCAACATCAACCACCATTTCACTACTTGCTCTTTTCACCCCTCCAAATGAAGCTAGAGCTGCTGTTAACATCTCCAAGGACCAAATTGTTTCTTCTCTTACACAAGTGGAGCAGACTATTGATCAGGTTCAGGTGGTTGGTTCTGGTTTTTTGGACTCAGCACAACGTGTTGCTGAAGCTGTAGGGAGTGCTTTGAAGCCTGGCTTCGATACCGCGTTGCCAATTGTGCAGCAGGCTGGACAAGAGGCTTTGAAAATTGCTTCTCCAGCCTTCTCTGAGGCTTCCAAGAAGGCTCAAGAAGCACTTCAGAGCTCTGGTCTTGATACCCAAACTGCTGCTAAGACAGTGGCAGATGCTGCACAACAAACAACCAAGGTGATTGAAGGTGCCAAGCCAATAGCCTCATCAACCATGGAAACTATAACTTCATCAGATCCTACCGTGATTGCTGGAACAGCTGGAGCACTATTCATTGCATACCTCTTGTTTCCTCCTATCTGGTCTGCCATCTCCTTCAATTTTCGCGGGTACAAAGGAGACTTGACACCAGCTCAAACACTTGATATGTTATGCACACAAAACTACATTTTGATTGATATTAGGTCAGAGAAGGATAAGGACAAATCTGGTATTCCTCGCCTTCCGTCTAGTGCTAAAAACAAGATGGTTGCCATTCCATTGGAAGAAGTGCCAAACAAAATACGGGGACTGGTAAGGAATGTGAAGAGAGTGGAAGCTGAAATAGCAGCATTAAAGATTTCATATCTGAAGAAAATCAACAAAGGCACCAACATTGTGATCTTGGACTCGTACTCGGACTCGGCAAAGATAGTTGCTAGAACGCTAACAGGGCTTGGATTTAAGAACACATGGATCGTTGGTGATGGCTTTTCTGGAGGCAAAGGGTGGTTACAGAGTAGATTAGGAACAGATTCGTATAAATTTTCGTTTGCAGAGGTGTTGTCACCATCCAGAATCATCCCTGCGGGTGTTAGAGGAGGTTTTGGAACAACCAGCAGACAATCTACTCAGAAACTTCTACCTGGGGCTGACTGA

Protein sequence

>Msa1260640

MAMEITAMASLPTTKPSLPSPSTLPHTITTLSKPQLRRIALPTSTTISLLALFTPPNEARAAVNISKDQIVSSLTQVEQTIDQVQVVGSGFLDSAQRVAEAVGSALKPGFDTALPIVQQAGQEALKIASPAFSEASKKAQEALQSSGLDTQTAAKTVADAAQQTTKVIEGAKPIASSTMETITSSDPTVIAGTAGALFIAYLLFPPIWSAISFNFRGYKGDLTPAQTLDMLCTQNYILIDIRSEKDKDKSGIPRLPSSAKNKMVAIPLEEVPNKIRGLVRNVKRVEAEIAALKISYLKKINKGTNIVILDSYSDSAKIVARTLTGLGFKNTWIVGDGFSGGKGWLQSRLGTDSYKFSFAEVLSPSRIIPAGVRGGFGTTSRQSTQKLLPGAD*