AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0593160


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0593160 MtrunA17_Chr4g0011461 89.892 465 27 3 1 463 1 447 0.0 813
Msa0593160 MtrunA17_Chr1g0197521 28.612 353 207 10 56 406 1 310 5.92e-27 111
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0593160 AT2G45270.1 72.770 426 94 5 42 463 69 476 0.0 642
Msa0593160 AT4G22720.1 25.441 397 227 10 56 450 5 334 1.52e-24 104
Msa0593160 AT4G22720.2 25.441 397 227 10 56 450 5 334 1.52e-24 104

Find 143 sgRNAs with CRISPR-Local

Find 692 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCACTTAAGTTATACAATTT+TGG 0.075571 4_2:+19054331 None:intergenic
TTTAAGAAATTTGTAATAAA+AGG 0.124183 4_2:-19054259 Msa0593160:three_prime_UTR
TGCCGAAGAAATAGGAATTT+TGG 0.179179 4_2:+19055732 None:intergenic
TTGGTCTATACCTTTGTTAT+TGG 0.221333 4_2:-19054168 Msa0593160:three_prime_UTR
CGATGGAGATATTGTCGTTT+TGG 0.239610 4_2:-19064206 Msa0593160:CDS
CTCATTCTTGCACGTGATCT+TGG 0.264225 4_2:-19056509 Msa0593160:CDS
TCATTACTTGCCGAAGAAAT+AGG 0.280752 4_2:+19055724 None:intergenic
TGATACTGTTTGGTTATATT+CGG 0.283723 4_2:+19054481 None:intergenic
ACTGCGGTTGCTGTTACTAT+TGG 0.303456 4_2:-19059963 Msa0593160:CDS
ACAATATCTCCATCGCGTTT+TGG 0.306487 4_2:+19064214 None:intergenic
CAGAAGGCTCGGAGAATTGC+AGG 0.314185 4_2:-19058700 Msa0593160:CDS
GTGATATTGCTTGATTATAT+CGG 0.317386 4_2:+19054439 None:intergenic
ACTCAATTGCCAGTCTTACT+TGG 0.331056 4_2:+19056125 None:intergenic
GCAGACCTGCTTGTGAAGTA+TGG 0.338654 4_2:-19061218 Msa0593160:CDS
AGAAGAACCAGAAGACTTTC+TGG 0.361040 4_2:-19054982 Msa0593160:intron
CAATCCTTATGCTGCCTCAT+TGG 0.365186 4_2:+19056175 None:intergenic
AGATGTGAAGAGTGAAGGTT+TGG 0.374267 4_2:+19064303 None:intergenic
ATGAATTCGTGCCGTTCTTA+AGG 0.381153 4_2:+19054599 None:intergenic
AATGGCTTGGACTTGATATA+AGG 0.384502 4_2:-19056421 Msa0593160:CDS
GCCTCATGAAGTCACTATCT+TGG 0.394345 4_2:-19054507 Msa0593160:three_prime_UTR
GGTTGCTGTTACTATTGGTC+CGG 0.397717 4_2:-19059958 Msa0593160:CDS
GAATAAATTATTACCATTGT+CGG 0.398616 4_2:+19055234 None:intergenic
TGTCTGTTGCAGGTTGTCTC+TGG 0.399323 4_2:-19055352 Msa0593160:intron
CGCTGCGGGTAGAGTGTTTG+TGG 0.403150 4_2:+19064260 None:intergenic
TGCCAAAATTCCTATTTCTT+CGG 0.408888 4_2:-19055734 Msa0593160:CDS
TTGATTATATCGGGTTTAGC+GGG 0.410357 4_2:+19054449 None:intergenic
GGCTTTAATTTACCAATTGT+TGG 0.414914 4_2:-19058676 Msa0593160:CDS
GAGCCAAGTGATATCTTCTC+AGG 0.416005 4_2:-19064035 Msa0593160:intron
GGTTCTTCTGCAGGAGGTGG+AGG 0.418700 4_2:+19054996 None:intergenic
TTAAGAAATTTGTAATAAAA+GGG 0.419566 4_2:-19054258 Msa0593160:three_prime_UTR
ACCATTGTCGGTACAAAGCC+GGG 0.420683 4_2:+19055246 None:intergenic
TGATATTGCTTGATTATATC+GGG 0.421396 4_2:+19054440 None:intergenic
TCATTCTTGCACGTGATCTT+GGG 0.424423 4_2:-19056508 Msa0593160:CDS
AAACATACCAGAAAGTCTTC+TGG 0.427747 4_2:+19054975 None:intergenic
TTGCGTCAAATCAATATGTT+CGG 0.427836 4_2:-19055324 Msa0593160:CDS
TCGGTACAAAGCCGGGGAGG+AGG 0.428111 4_2:+19055253 None:intergenic
TCTGGTTCTTCTGCAGGAGG+TGG 0.428517 4_2:+19054993 None:intergenic
GGTTGGGCCAGGGGTGCCCA+AGG 0.430791 4_2:-19057303 Msa0593160:intron
GACGTAATGGACTCAATTGC+AGG 0.441092 4_2:-19057270 Msa0593160:intron
AAGTCTTCTGGTTCTTCTGC+AGG 0.443693 4_2:+19054987 None:intergenic
CTCAATTGCCAGTCTTACTT+GGG 0.447580 4_2:+19056126 None:intergenic
TGTACGCCCAAGGTGGCCAC+TGG 0.447871 4_2:-19054658 Msa0593160:CDS
TACCATTGTCGGTACAAAGC+CGG 0.451552 4_2:+19055245 None:intergenic
CAGTCATATAAGCTTTATCA+AGG 0.452366 4_2:+19059997 None:intergenic
GTTTGTGGGGAAGATGAATT+CGG 0.453375 4_2:+19064275 None:intergenic
ACTACCAGATGTCTTATAGA+AGG 0.455291 4_2:+19055456 None:intergenic
CTTATGACAAGTCAGCAAAA+TGG 0.461556 4_2:-19056439 Msa0593160:CDS
AACTAGTATGCCCTCCTCCC+CGG 0.461584 4_2:-19055264 Msa0593160:CDS
AAGTGGTGGTCCTGCTATAG+AGG 0.468477 4_2:-19056396 Msa0593160:CDS
CTTGGGCAATACATACAACT+TGG 0.471005 4_2:-19056491 Msa0593160:CDS
ATAATAAGCTGAGAAAAGGT+TGG 0.471305 4_2:+19064444 None:intergenic
GGAGCCTTCTATAAGACATC+TGG 0.477018 4_2:-19055460 Msa0593160:intron
ATGTCTTGTACAATGCAGTC+GGG 0.477158 4_2:-19058726 Msa0593160:CDS
GATTGCAACTTCTCTTATGC+TGG 0.480476 4_2:-19056157 Msa0593160:CDS
TTACGTCGACATCTAATCCT+TGG 0.481450 4_2:+19057286 None:intergenic
ACTACAATAGATGATGCTAT+TGG 0.484389 4_2:-19056467 Msa0593160:CDS
TACGTCGACATCTAATCCTT+GGG 0.489623 4_2:+19057287 None:intergenic
TGCGTCAAATCAATATGTTC+GGG 0.489887 4_2:-19055323 Msa0593160:CDS
ATGTGATGGACGCCAACAAT+TGG 0.491621 4_2:+19058664 None:intergenic
TAATTAATCAATGTCACATA+AGG 0.491998 4_2:-19054407 Msa0593160:three_prime_UTR
GTTGCTGTTACTATTGGTCC+GGG 0.493152 4_2:-19059957 Msa0593160:CDS
CTTGATTATATCGGGTTTAG+CGG 0.497840 4_2:+19054448 None:intergenic
GGTTCCAATGAGGCAGCATA+AGG 0.503532 4_2:-19056179 Msa0593160:CDS
CTAGATAATAAGCTGAGAAA+AGG 0.504504 4_2:+19064440 None:intergenic
GACAAGTCAGCAAAATGGCT+TGG 0.508751 4_2:-19056434 Msa0593160:CDS
AGGATTAGATGTCGACGTAA+TGG 0.508833 4_2:-19057283 Msa0593160:CDS
CAGTCGGGGTGCAGAAGGCT+CGG 0.513163 4_2:-19058711 Msa0593160:CDS
CGGTACAAAGCCGGGGAGGA+GGG 0.513180 4_2:+19055254 None:intergenic
TTGGTTTAGGTGAGAAGTGA+CGG 0.513335 4_2:-19064067 Msa0593160:intron
TGCTATAGAGGAGCTTGCTA+AGG 0.520558 4_2:-19056384 Msa0593160:CDS
GAATAGGTGTAATGGTTGCT+TGG 0.523654 4_2:-19055055 Msa0593160:intron
CATGTCTTGTACAATGCAGT+CGG 0.524309 4_2:-19058727 Msa0593160:CDS
CAATGCAGTCGGGGTGCAGA+AGG 0.525365 4_2:-19058716 Msa0593160:CDS
TCACTCACAAGTGATAGATC+AGG 0.525983 4_2:-19061165 Msa0593160:intron
GGAGGAAAACGTCACAATAG+TGG 0.526956 4_2:-19054386 Msa0593160:three_prime_UTR
GGTTTAAGTCTCTGCCTTCG+TGG 0.527530 4_2:-19059936 Msa0593160:intron
GATGTGAAGAGTGAAGGTTT+GGG 0.531779 4_2:+19064304 None:intergenic
CTGTTGCAGGTTGTCTCTGG+TGG 0.533183 4_2:-19055349 Msa0593160:intron
GATACGGTTGTGAAGAAGAA+TGG 0.534130 4_2:-19055292 Msa0593160:CDS
CATGGAGGCTCATGCTCTAG+TGG 0.537949 4_2:-19058644 Msa0593160:CDS
GTACGCCCAAGGTGGCCACT+GGG 0.537981 4_2:-19054657 Msa0593160:CDS
TGTTCGGGCTCAGCTTGATA+CGG 0.538444 4_2:-19055308 Msa0593160:CDS
GGTGTAATGGTTGCTTGGAC+TGG 0.539870 4_2:-19055050 Msa0593160:CDS
AATTCAGTGGGCATTGAAGA+TGG 0.542394 4_2:-19055481 Msa0593160:CDS
TTAGCAAGCTCCTCTATAGC+AGG 0.544377 4_2:+19056386 None:intergenic
CAGCTTATTATCTAGTGAGT+AGG 0.547780 4_2:-19064432 Msa0593160:five_prime_UTR
TGAATTAGAGATGTAAGAGA+AGG 0.551377 4_2:+19054576 None:intergenic
AATTGCAGTATTACATCTTG+AGG 0.551614 4_2:-19055520 Msa0593160:CDS
GAGGAGGGCATACTAGTTGA+AGG 0.557928 4_2:+19055269 None:intergenic
AATTGTTGGCGTCCATCACA+TGG 0.562392 4_2:-19058662 Msa0593160:CDS
TCTTCTGGTTCTTCTGCAGG+AGG 0.563864 4_2:+19054990 None:intergenic
GCTGCGGGTAGAGTGTTTGT+GGG 0.563940 4_2:+19064261 None:intergenic
GAGCATGAGCCTCCATGTGA+TGG 0.565179 4_2:+19058650 None:intergenic
TATAGAGGAGCTTGCTAAGG+AGG 0.565375 4_2:-19056381 Msa0593160:CDS
ACGCCCAAGGTGGCCACTGG+GGG 0.566802 4_2:-19054655 Msa0593160:CDS
GAAGAAATGAGTTTCAGCAC+TGG 0.567037 4_2:+19064398 None:intergenic
TTAATCAATGTCACATAAGG+AGG 0.569276 4_2:-19054404 Msa0593160:three_prime_UTR
CGACTGCATTGTACAAGACA+TGG 0.574883 4_2:+19058728 None:intergenic
CGCCTCCATACTTCACAAGC+AGG 0.575654 4_2:+19061213 None:intergenic
CCCCGGCTTTGTACCGACAA+TGG 0.576842 4_2:-19055247 Msa0593160:intron
CAGTATTACATCTTGAGGAA+AGG 0.576903 4_2:-19055515 Msa0593160:CDS
CGGAGAGATGTGAAGAGTGA+AGG 0.577110 4_2:+19064298 None:intergenic
GAAAACGTCACAATAGTGGT+TGG 0.586938 4_2:-19054382 Msa0593160:three_prime_UTR
AAAATAAAAGCTTACGATAG+CGG 0.587713 4_2:+19064153 None:intergenic
TTCAGTATGATGTACGCCCA+AGG 0.592571 4_2:-19054668 Msa0593160:intron
AGAAGGCTCGGAGAATTGCA+GGG 0.598558 4_2:-19058699 Msa0593160:CDS
GGACTTGATATAAGGAGAAG+TGG 0.600241 4_2:-19056413 Msa0593160:CDS
TAAAGCTTATATGACTGAGA+AGG 0.603601 4_2:-19059991 Msa0593160:CDS
ATAACTAACCTGAAAAGAAG+CGG 0.603786 4_2:+19055675 None:intergenic
AGGCTCATGCTCTAGTGGCT+AGG 0.604785 4_2:-19058639 Msa0593160:intron
TGATTATATCGGGTTTAGCG+GGG 0.605523 4_2:+19054450 None:intergenic
ATAGAGGAGCTTGCTAAGGA+GGG 0.607465 4_2:-19056380 Msa0593160:CDS
TTTCAGTCGCTCCTTAAGAA+CGG 0.607827 4_2:-19054610 Msa0593160:CDS
GGTATTGAGCACTTTCGCGT+AGG 0.608335 4_2:-19055029 Msa0593160:CDS
TACGCCCAAGGTGGCCACTG+GGG 0.609139 4_2:-19054656 Msa0593160:CDS
AACCGAACTCCAAAACGCGA+TGG 0.610714 4_2:-19064223 Msa0593160:CDS
AGGGAAGCAAGAGACGCTGC+GGG 0.614846 4_2:+19064246 None:intergenic
TTGTACAAGACATGGACAGA+TGG 0.618290 4_2:+19058736 None:intergenic
GAAGGCTCGGAGAATTGCAG+GGG 0.619023 4_2:-19058698 Msa0593160:CDS
GGTGTGAACGAGCAATTCAG+TGG 0.634788 4_2:-19055494 Msa0593160:CDS
TTTGGGAATGAAATTTACGC+GGG 0.638092 4_2:+19064321 None:intergenic
TTCATGAGGCTGAAGCAACA+CGG 0.644012 4_2:+19054520 None:intergenic
AGTCATATAAGCTTTATCAA+GGG 0.646467 4_2:+19059998 None:intergenic
GTTTGCTGTAGGTTCCAATG+AGG 0.646943 4_2:-19056189 Msa0593160:intron
TCCAAGATAGTGACTTCATG+AGG 0.647385 4_2:+19054506 None:intergenic
GTGTGAACGAGCAATTCAGT+GGG 0.650776 4_2:-19055493 Msa0593160:CDS
TGTCTTGTACAATGCAGTCG+GGG 0.654017 4_2:-19058725 Msa0593160:CDS
GACCTGCTTGTGAAGTATGG+AGG 0.654035 4_2:-19061215 Msa0593160:CDS
GTACCTGAGAAGATATCACT+TGG 0.654321 4_2:+19064032 None:intergenic
AATAGATGATGCTATTGGCG+AGG 0.661921 4_2:-19056462 Msa0593160:CDS
CTTGATATAAGGAGAAGTGG+TGG 0.665095 4_2:-19056410 Msa0593160:CDS
TAGGGAAGCAAGAGACGCTG+CGG 0.666064 4_2:+19064245 None:intergenic
CGAAGGCAGAGACTTAAACC+CGG 0.668882 4_2:+19059939 None:intergenic
TGTGGGGAAGATGAATTCGG+CGG 0.675849 4_2:+19064278 None:intergenic
GTTTGGGAATGAAATTTACG+CGG 0.677188 4_2:+19064320 None:intergenic
CTGCGGGTAGAGTGTTTGTG+GGG 0.681674 4_2:+19064262 None:intergenic
CCATTGTCGGTACAAAGCCG+GGG 0.692599 4_2:+19055247 None:intergenic
GACTGAGAAGGATCTTACTG+CGG 0.698127 4_2:-19059979 Msa0593160:CDS
AAGGCTCGGAGAATTGCAGG+GGG 0.698297 4_2:-19058697 Msa0593160:CDS
TTGTCGGTACAAAGCCGGGG+AGG 0.699082 4_2:+19055250 None:intergenic
AGTATGATGTACGCCCAAGG+TGG 0.718581 4_2:-19054665 Msa0593160:CDS
AAGTTCGAGTATTACCACGA+AGG 0.726648 4_2:+19059922 None:intergenic
TGTTGGCGTCCATCACATGG+AGG 0.747158 4_2:-19058659 Msa0593160:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTTATTTATTTATTTT+TGG - chr4_2:19054533-19054552 Msa0593160:three_prime_UTR 0.0%
!!! ATTTTTCATTTTTTTTTTTG+CGG - chr4_2:19054484-19054503 Msa0593160:three_prime_UTR 10.0%
!!! TATTTATTTATTTTTGGTTT+AGG - chr4_2:19054539-19054558 Msa0593160:exon 10.0%
!!! AAAATAATAGTATTTTTTAG+TGG + chr4_2:19055178-19055197 None:intergenic 10.0%
!!! AAACATTTTTGTTTTTAATT+TGG - chr4_2:19055291-19055310 Msa0593160:CDS 10.0%
!!! AACATTTTTGTTTTTAATTT+GGG - chr4_2:19055292-19055311 Msa0593160:CDS 10.0%
!!! TTTTTTGACTATATTTTTAT+TGG + chr4_2:19055324-19055343 None:intergenic 10.0%
!!! GTTATTTTACTTTTAATTAT+AGG - chr4_2:19058586-19058605 Msa0593160:intron 10.0%
!!! TAATAATTTATTCTTTGTTT+TGG - chr4_2:19063395-19063414 Msa0593160:intron 10.0%
!! TTTAAGAAATTTGTAATAAA+AGG - chr4_2:19064360-19064379 Msa0593160:CDS 10.0%
!! TTAAGAAATTTGTAATAAAA+GGG - chr4_2:19064361-19064380 Msa0593160:CDS 10.0%
!!! GATCTTATTTTTTTTTTTTT+TGG - chr4_2:19064412-19064431 Msa0593160:five_prime_UTR 10.0%
!!! TTATATGTTGATTTTATTGA+AGG + chr4_2:19055074-19055093 None:intergenic 15.0%
!!! GTTGATAGATTAAATTAAAT+TGG + chr4_2:19055143-19055162 None:intergenic 15.0%
!!! TAATGAGTTGAATAAATATA+TGG - chr4_2:19055695-19055714 Msa0593160:CDS 15.0%
!! ATTATTAGTATTATTACTAC+CGG - chr4_2:19055879-19055898 Msa0593160:intron 15.0%
!!! AAGTATCTATAAGTTTTATT+TGG + chr4_2:19056168-19056187 None:intergenic 15.0%
!!! ATAAAACTTATAGATACTTT+TGG - chr4_2:19056169-19056188 Msa0593160:CDS 15.0%
!! GTTAATAAGTTTATTTAAAC+TGG - chr4_2:19056225-19056244 Msa0593160:intron 15.0%
!!! TTATTTTTAAGACAACTTAT+GGG - chr4_2:19056999-19057018 Msa0593160:intron 15.0%
!!! TTGATGGTTTTTTTTTAATA+GGG + chr4_2:19058928-19058947 None:intergenic 15.0%
!!! ATTGATGGTTTTTTTTTAAT+AGG + chr4_2:19058929-19058948 None:intergenic 15.0%
!! ATTTAAAGAGTAATGATATT+TGG - chr4_2:19058968-19058987 Msa0593160:intron 15.0%
!! TAGCTAAAATATTAACAAAA+TGG - chr4_2:19059260-19059279 Msa0593160:intron 15.0%
!! TATAACTACTCTATTTATAA+AGG - chr4_2:19059505-19059524 Msa0593160:intron 15.0%
!! AAAATGACATATTAATTAGA+GGG + chr4_2:19060020-19060039 None:intergenic 15.0%
!!! AACTATTTAAAATTGTGATT+CGG - chr4_2:19060067-19060086 Msa0593160:intron 15.0%
!!! ATTAAATTTTCTAAAAGGTT+AGG + chr4_2:19060808-19060827 None:intergenic 15.0%
!!! TGTCAATTAAATTTTCTAAA+AGG + chr4_2:19060813-19060832 None:intergenic 15.0%
!! ATATGCATAAATTATTGAAA+TGG - chr4_2:19060919-19060938 Msa0593160:intron 15.0%
!! TAATGACATATATTGTTTAT+AGG - chr4_2:19062074-19062093 Msa0593160:intron 15.0%
!! AATGACATATATTGTTTATA+GGG - chr4_2:19062075-19062094 Msa0593160:intron 15.0%
!!! ATAGATTTGTTATTCATAAA+TGG - chr4_2:19062542-19062561 Msa0593160:intron 15.0%
!! TAAATAATATAGATTGCATA+TGG - chr4_2:19062801-19062820 Msa0593160:intron 15.0%
!! TATTATAGCTAATATCTTAA+TGG - chr4_2:19063527-19063546 Msa0593160:intron 15.0%
!!! AATAAATTTATTTTGCGAAA+AGG - chr4_2:19063753-19063772 Msa0593160:intron 15.0%
!!! TTACTGATTTTATTAAACAT+TGG - chr4_2:19063922-19063941 Msa0593160:intron 15.0%
!!! TTTTAGCTTCTTAAAAGAAA+AGG + chr4_2:19056281-19056300 None:intergenic 20.0%
!! TCATGTTAAATTGAAAATTG+TGG - chr4_2:19056377-19056396 Msa0593160:CDS 20.0%
!! TTATTGAATGTAAATAGAAG+AGG - chr4_2:19056496-19056515 Msa0593160:CDS 20.0%
!!! AAATATGTTTAGAGTTTGTT+AGG + chr4_2:19056627-19056646 None:intergenic 20.0%
!! AATTTCTGTTATAAAAGAGA+GGG + chr4_2:19056674-19056693 None:intergenic 20.0%
!!! TCATTTTCTCAAATTATTAC+CGG - chr4_2:19056905-19056924 Msa0593160:intron 20.0%
!!! GTTATTTTTAAGACAACTTA+TGG - chr4_2:19056998-19057017 Msa0593160:intron 20.0%
!! CATAGTTAGATGATAATATA+TGG - chr4_2:19057115-19057134 Msa0593160:intron 20.0%
!! AAAATCAATTCGACTAAAAT+TGG + chr4_2:19057212-19057231 None:intergenic 20.0%
!!! AATTTTAGTCGAATTGATTT+TGG - chr4_2:19057211-19057230 Msa0593160:intron 20.0%
!! TTAACATTTAATTGCAAGAT+AGG + chr4_2:19057489-19057508 None:intergenic 20.0%
!!! ATATAAACATAACTTGCATA+AGG + chr4_2:19057656-19057675 None:intergenic 20.0%
!!! TATTAACTTTTGAGTTACTT+TGG - chr4_2:19057944-19057963 Msa0593160:intron 20.0%
!!! ATTAACTTTTGAGTTACTTT+GGG - chr4_2:19057945-19057964 Msa0593160:intron 20.0%
!!! ATATAAACATAACTTGCATA+AGG + chr4_2:19057656-19057675 None:intergenic 20.0%
!!! TATTAACTTTTGAGTTACTT+TGG - chr4_2:19057944-19057963 Msa0593160:intron 20.0%
!!! ATTAACTTTTGAGTTACTTT+GGG - chr4_2:19057945-19057964 Msa0593160:intron 20.0%
!! TTATTCTTCAATAGAACTTT+AGG + chr4_2:19058808-19058827 None:intergenic 20.0%
!! AGTATGTAATAGAGAAATAT+GGG + chr4_2:19058887-19058906 None:intergenic 20.0%
!!! TTTTAATAGGGAAATATTCA+TGG + chr4_2:19058916-19058935 None:intergenic 20.0%
!! AATAAAAAGAGAGAAAAAGA+AGG + chr4_2:19059024-19059043 None:intergenic 20.0%
!!! TTCTTTTTCTCTCTTTTTAT+TGG - chr4_2:19059023-19059042 Msa0593160:intron 20.0%
!! TTCAATTAATGAATATCATC+AGG + chr4_2:19059234-19059253 None:intergenic 20.0%
!!! TCGTTTTTACTACTAAATAA+TGG + chr4_2:19059332-19059351 None:intergenic 20.0%
!! ACAATCAGATTTGAATATAT+AGG + chr4_2:19059750-19059769 None:intergenic 20.0%
!! GAAAATGACATATTAATTAG+AGG + chr4_2:19060021-19060040 None:intergenic 20.0%
!! AATATTACCTGAAATAAGTA+GGG + chr4_2:19060226-19060245 None:intergenic 20.0%
!!! TATTTTCATTTTTTCTTCCT+TGG - chr4_2:19060334-19060353 Msa0593160:intron 20.0%
!!! ATTTTCATTTTTTCTTCCTT+GGG - chr4_2:19060335-19060354 Msa0593160:intron 20.0%
!!! TTTACTTAAATAGATTAGCT+TGG - chr4_2:19061014-19061033 Msa0593160:intron 20.0%
!! ATGTATAACTAAAAAAGGTT+AGG + chr4_2:19061072-19061091 None:intergenic 20.0%
!! AAAGCATGTATAACTAAAAA+AGG + chr4_2:19061077-19061096 None:intergenic 20.0%
!!! TATAATTCTAAGAAAAGTCT+AGG + chr4_2:19061762-19061781 None:intergenic 20.0%
!! TGTTCAGTATATTTATGTAT+TGG - chr4_2:19062031-19062050 Msa0593160:intron 20.0%
!! ATGACATATATTGTTTATAG+GGG - chr4_2:19062076-19062095 Msa0593160:intron 20.0%
!! GTTATTCATAAATGGTTTAT+AGG - chr4_2:19062550-19062569 Msa0593160:intron 20.0%
!! AGGAAAATTATTTATAACGA+TGG - chr4_2:19062570-19062589 Msa0593160:intron 20.0%
!! ATATTATTTAGTTATCTTGC+AGG + chr4_2:19062791-19062810 None:intergenic 20.0%
!! ACTTCAGTCATAAAATTTAA+AGG + chr4_2:19062994-19063013 None:intergenic 20.0%
!!! TAGTTTGAAATCTAAAATTC+AGG - chr4_2:19063182-19063201 Msa0593160:intron 20.0%
!! GAATAAATTATTACCATTGT+CGG + chr4_2:19063388-19063407 None:intergenic 20.0%
!!! CATTGATTAATTAGATTTTC+TGG + chr4_2:19064205-19064224 None:intergenic 20.0%
!! TAATTAATCAATGTCACATA+AGG - chr4_2:19064212-19064231 Msa0593160:CDS 20.0%
!!! CACTTAAGTTATACAATTTT+GGG + chr4_2:19064290-19064309 None:intergenic 20.0%
!!! TCACTTAAGTTATACAATTT+TGG + chr4_2:19064291-19064310 None:intergenic 20.0%
!! ATAACTTAAGTGAAAAAAAG+AGG - chr4_2:19064298-19064317 Msa0593160:CDS 20.0%
!! TAACTTAAGTGAAAAAAAGA+GGG - chr4_2:19064299-19064318 Msa0593160:CDS 20.0%
!!! TGGTATTGTTATTTTTGTTT+TGG - chr4_2:19064432-19064451 Msa0593160:five_prime_UTR 20.0%
! AAAATAAAAGCTTACGATAG+CGG + chr4_2:19054469-19054488 None:intergenic 25.0%
!! ATACTAACTTAGTTTAGAGT+AGG - chr4_2:19054803-19054822 Msa0593160:intron 25.0%
! AGAAATAGAGTAGATTTGAT+GGG - chr4_2:19054973-19054992 Msa0593160:intron 25.0%
! AATAAGCAATTTCTCTTGTT+TGG + chr4_2:19055551-19055570 None:intergenic 25.0%
!!! AAGTCTTATTTCACTAAATG+GGG + chr4_2:19055745-19055764 None:intergenic 25.0%
!!! CAAGTCTTATTTCACTAAAT+GGG + chr4_2:19055746-19055765 None:intergenic 25.0%
!!! TTTTCTTTTTGCTACTTTTC+TGG - chr4_2:19056002-19056021 Msa0593160:intron 25.0%
!!! TTGGTTTTTATCAGACAAAA+TGG + chr4_2:19056082-19056101 None:intergenic 25.0%
! ACTAAAATCAAGTTTGACAA+GGG - chr4_2:19056116-19056135 Msa0593160:CDS 25.0%
!! ATTGCAGCAAAAAGATTTTT+AGG + chr4_2:19056315-19056334 None:intergenic 25.0%
! GGTATTAGAAAAATTGATCA+TGG - chr4_2:19056354-19056373 Msa0593160:intron 25.0%
! GAATTTCTGTTATAAAAGAG+AGG + chr4_2:19056675-19056694 None:intergenic 25.0%
! AACAGAAATTCCTTAAATTC+AGG - chr4_2:19056684-19056703 Msa0593160:intron 25.0%
! ACAGAAATTCCTTAAATTCA+GGG - chr4_2:19056685-19056704 Msa0593160:intron 25.0%
!! TTCTTCATAGTTTTTGAATG+AGG - chr4_2:19056972-19056991 Msa0593160:intron 25.0%
! TACATTTCTTTGTATACCTT+TGG + chr4_2:19057029-19057048 None:intergenic 25.0%
!! AAAGGTATACAAAGAAATGT+AGG - chr4_2:19057028-19057047 Msa0593160:intron 25.0%
! ACTAATAATACATGTTGCAA+AGG - chr4_2:19057147-19057166 Msa0593160:intron 25.0%
! CTAATAATACATGTTGCAAA+GGG - chr4_2:19057148-19057167 Msa0593160:intron 25.0%
! TATCAAATACTATAAGATGC+AGG - chr4_2:19057249-19057268 Msa0593160:intron 25.0%
! ATCAAATACTATAAGATGCA+GGG - chr4_2:19057250-19057269 Msa0593160:intron 25.0%
! TGCAGATACATAAACATAAT+GGG + chr4_2:19057811-19057830 None:intergenic 25.0%
! ATGCAGATACATAAACATAA+TGG + chr4_2:19057812-19057831 None:intergenic 25.0%
! ATATGCAATACTTACTAACA+TGG + chr4_2:19057836-19057855 None:intergenic 25.0%
!!! ATTAGTTTTTCTTCTTTGTC+CGG - chr4_2:19057722-19057741 Msa0593160:intron 25.0%
! TGCAGATACATAAACATAAT+GGG + chr4_2:19057811-19057830 None:intergenic 25.0%
! ATGCAGATACATAAACATAA+TGG + chr4_2:19057812-19057831 None:intergenic 25.0%
! ATATGCAATACTTACTAACA+TGG + chr4_2:19057836-19057855 None:intergenic 25.0%
! TGATAAACTGAGATAGAAAA+CGG + chr4_2:19058526-19058545 None:intergenic 25.0%
!! AGTCATATAAGCTTTATCAA+GGG + chr4_2:19058624-19058643 None:intergenic 25.0%
! TAAAATTTAACTGGAACGAT+TGG + chr4_2:19058861-19058880 None:intergenic 25.0%
! TATGGGAGTTAAAATTTAAC+TGG + chr4_2:19058870-19058889 None:intergenic 25.0%
! CAGTATGTAATAGAGAAATA+TGG + chr4_2:19058888-19058907 None:intergenic 25.0%
! CTTTAAATGATATCATGTGT+TGG + chr4_2:19058956-19058975 None:intergenic 25.0%
! AAAACAATAGAGAGAGAAAA+AGG - chr4_2:19059049-19059068 Msa0593160:intron 25.0%
! AACGATTCTTCTCAATTTAT+TGG - chr4_2:19059347-19059366 Msa0593160:intron 25.0%
! GAATATTACCTGAAATAAGT+AGG + chr4_2:19060227-19060246 None:intergenic 25.0%
!!! TTGAGTTTTATCTTTAGTCA+TGG - chr4_2:19060265-19060284 Msa0593160:intron 25.0%
! AATGGTACAGGTTTAAAAAA+AGG + chr4_2:19060448-19060467 None:intergenic 25.0%
!! TTTTTAAACCTGTACCATTT+TGG - chr4_2:19060449-19060468 Msa0593160:intron 25.0%
! AAAACTTAATCTGTCCAAAA+TGG + chr4_2:19060466-19060485 None:intergenic 25.0%
! TTACAGATCATCAAATTTAC+TGG + chr4_2:19060562-19060581 None:intergenic 25.0%
!! AAATTTGATGATCTGTAAAC+AGG - chr4_2:19060564-19060583 Msa0593160:intron 25.0%
!! AATTTGATGATCTGTAAACA+GGG - chr4_2:19060565-19060584 Msa0593160:intron 25.0%
!! AACTGAATTTTATGAAGTCT+AGG - chr4_2:19060743-19060762 Msa0593160:intron 25.0%
!!! CTAGGTTTGATTTGTTTATA+TGG - chr4_2:19060761-19060780 Msa0593160:intron 25.0%
! TTACCTCTATATAAGACTAT+AGG - chr4_2:19060875-19060894 Msa0593160:intron 25.0%
! ACTAAAAAAGGTTAGGATTT+AGG + chr4_2:19061065-19061084 None:intergenic 25.0%
!!! TCTATTTGTTTTACAGGTAA+GGG + chr4_2:19061168-19061187 None:intergenic 25.0%
! AAGAACCCAAAATTTGATTA+TGG - chr4_2:19061611-19061630 Msa0593160:intron 25.0%
! AGTTAAGGATATGAAGAATA+TGG + chr4_2:19061791-19061810 None:intergenic 25.0%
! CTTACCTTTATATGTAAAGA+TGG - chr4_2:19061948-19061967 Msa0593160:intron 25.0%
! AGAACCATCTTTACATATAA+AGG + chr4_2:19061955-19061974 None:intergenic 25.0%
! TGACATATATTGTTTATAGG+GGG - chr4_2:19062077-19062096 Msa0593160:intron 25.0%
! AACAATACATGTTCAATGTA+GGG + chr4_2:19062352-19062371 None:intergenic 25.0%
! AAACAATACATGTTCAATGT+AGG + chr4_2:19062353-19062372 None:intergenic 25.0%
!!! TTTATTACATTGTTTGCTGT+AGG - chr4_2:19062419-19062438 Msa0593160:intron 25.0%
!! ACTTTTAACGTACATCTTTT+TGG + chr4_2:19062520-19062539 None:intergenic 25.0%
! AAAAGGACAGATAATCTATT+GGG + chr4_2:19062608-19062627 None:intergenic 25.0%
! AAAAAGGACAGATAATCTAT+TGG + chr4_2:19062609-19062628 None:intergenic 25.0%
! CAGTCATAAAATTTAAAGGA+AGG + chr4_2:19062990-19063009 None:intergenic 25.0%
!!! TGTTTTGGTTTTAACAATGA+AGG - chr4_2:19063410-19063429 Msa0593160:intron 25.0%
! ATACTCTTCTATGAAGAATT+GGG + chr4_2:19063483-19063502 None:intergenic 25.0%
! TATACTCTTCTATGAAGAAT+TGG + chr4_2:19063484-19063503 None:intergenic 25.0%
!!! TTTTAACTGAATAGGTGTAA+TGG - chr4_2:19063556-19063575 Msa0593160:intron 25.0%
! TTAGAGAATCATAATAGGAA+AGG + chr4_2:19063722-19063741 None:intergenic 25.0%
! TGCATTTAGAGAATCATAAT+AGG + chr4_2:19063727-19063746 None:intergenic 25.0%
! TTATGATTCTCTAAATGCAT+TGG - chr4_2:19063728-19063747 Msa0593160:intron 25.0%
!! TATTTTGCGAAAAGGAAATA+TGG - chr4_2:19063761-19063780 Msa0593160:intron 25.0%
! TGATACTGTTTGGTTATATT+CGG + chr4_2:19064141-19064160 None:intergenic 25.0%
! TGATATTGCTTGATTATATC+GGG + chr4_2:19064182-19064201 None:intergenic 25.0%
! GTGATATTGCTTGATTATAT+CGG + chr4_2:19064183-19064202 None:intergenic 25.0%
ATAATAAGCTGAGAAAAGGT+TGG + chr4_2:19054178-19054197 None:intergenic 30.0%
CTAGATAATAAGCTGAGAAA+AGG + chr4_2:19054182-19054201 None:intergenic 30.0%
!!! GTTACTTTTTCTCTCTACAA+TGG - chr4_2:19054260-19054279 Msa0593160:three_prime_UTR 30.0%
AATTCAGTAAATTGAAGCGT+TGG - chr4_2:19054665-19054684 Msa0593160:CDS 30.0%
GAGAAATAGAGTAGATTTGA+TGG - chr4_2:19054972-19054991 Msa0593160:intron 30.0%
! CTTTTTCTTCACTATACTGA+TGG + chr4_2:19055391-19055410 None:intergenic 30.0%
GAAGAGAGAAATGATATATG+TGG + chr4_2:19055511-19055530 None:intergenic 30.0%
!! CCAAGTCTTATTTCACTAAA+TGG + chr4_2:19055747-19055766 None:intergenic 30.0%
CCATTTAGTGAAATAAGACT+TGG - chr4_2:19055744-19055763 Msa0593160:intron 30.0%
TTAGTGAACATTCTAGTGTT+TGG + chr4_2:19056101-19056120 None:intergenic 30.0%
CACTAAAATCAAGTTTGACA+AGG - chr4_2:19056115-19056134 Msa0593160:CDS 30.0%
!! TAGATACTTTTGGAGAAGTT+AGG - chr4_2:19056179-19056198 Msa0593160:CDS 30.0%
TGATAGAACCCTGAAAATTA+AGG - chr4_2:19056458-19056477 Msa0593160:CDS 30.0%
! AGTTGTTGCCTTAATTTTCA+GGG + chr4_2:19056469-19056488 None:intergenic 30.0%
TGTTATAAAAGAGAGGGTAA+GGG + chr4_2:19056668-19056687 None:intergenic 30.0%
TAGAATATGCCCTGAATTTA+AGG + chr4_2:19056697-19056716 None:intergenic 30.0%
!!! TCTGATAGGAAACTAGTTTT+GGG + chr4_2:19056778-19056797 None:intergenic 30.0%
!! ATCTGATAGGAAACTAGTTT+TGG + chr4_2:19056779-19056798 None:intergenic 30.0%
! TTCAAAAAGCACAATCTGAT+AGG + chr4_2:19056792-19056811 None:intergenic 30.0%
!! TGATTTTGGTACTTATGAGT+CGG - chr4_2:19057225-19057244 Msa0593160:intron 30.0%
TCAAATACTATAAGATGCAG+GGG - chr4_2:19057251-19057270 Msa0593160:intron 30.0%
TGTGTAACTTCTTCACATTA+AGG - chr4_2:19057379-19057398 Msa0593160:intron 30.0%
GTGACAAAACATGCATAATA+AGG + chr4_2:19057615-19057634 None:intergenic 30.0%
CAGATACATAAACATAATGG+GGG + chr4_2:19057809-19057828 None:intergenic 30.0%
GCAGATACATAAACATAATG+GGG + chr4_2:19057810-19057829 None:intergenic 30.0%
GTGACAAAACATGCATAATA+AGG + chr4_2:19057615-19057634 None:intergenic 30.0%
!! TTAGTTTTTCTTCTTTGTCC+GGG - chr4_2:19057723-19057742 Msa0593160:intron 30.0%
CAGATACATAAACATAATGG+GGG + chr4_2:19057809-19057828 None:intergenic 30.0%
GCAGATACATAAACATAATG+GGG + chr4_2:19057810-19057829 None:intergenic 30.0%
! CAGTCATATAAGCTTTATCA+AGG + chr4_2:19058625-19058644 None:intergenic 30.0%
TAAAGCTTATATGACTGAGA+AGG - chr4_2:19058628-19058647 Msa0593160:intron 30.0%
TTCTTCAATAGAACTTTAGG+TGG + chr4_2:19058805-19058824 None:intergenic 30.0%
TCATGTGTTGGAAATATTGA+TGG + chr4_2:19058944-19058963 None:intergenic 30.0%
ATGATATTTGGACAACCATT+TGG - chr4_2:19058980-19058999 Msa0593160:intron 30.0%
!!! GCACTATCTTGCTTATTTTA+AGG + chr4_2:19059162-19059181 None:intergenic 30.0%
GCAATATTGTTTATCGACAA+AGG - chr4_2:19059383-19059402 Msa0593160:intron 30.0%
AAGTAATCAACGTTAATGTC+AGG - chr4_2:19059560-19059579 Msa0593160:intron 30.0%
AGTAATCAACGTTAATGTCA+GGG - chr4_2:19059561-19059580 Msa0593160:intron 30.0%
! CATGTTAGTGTATTTTTCTC+TGG + chr4_2:19059683-19059702 None:intergenic 30.0%
AAATACACTAACATGCAAGT+TGG - chr4_2:19059688-19059707 Msa0593160:intron 30.0%
AATACACTAACATGCAAGTT+GGG - chr4_2:19059689-19059708 Msa0593160:intron 30.0%
CTTCAATGAGTACTTTAAGT+CGG + chr4_2:19059799-19059818 None:intergenic 30.0%
! GACTTAAAGTACTCATTGAA+GGG - chr4_2:19059798-19059817 Msa0593160:intron 30.0%
! GGCTTTAATTTACCAATTGT+TGG - chr4_2:19059943-19059962 Msa0593160:CDS 30.0%
!!! AATATGTCATTTTCTTCCTG+TGG - chr4_2:19060027-19060046 Msa0593160:intron 30.0%
! TGTACTTTTGTGTGTTCTTT+AGG - chr4_2:19060119-19060138 Msa0593160:intron 30.0%
ATGAGAGACATACATATCTT+TGG - chr4_2:19060159-19060178 Msa0593160:intron 30.0%
! ACATACATATCTTTGGTTTC+AGG - chr4_2:19060166-19060185 Msa0593160:intron 30.0%
GATAAAACTCAACCAAAAAC+AGG + chr4_2:19060257-19060276 None:intergenic 30.0%
AGCATGACTGAAAATAAGTA+GGG + chr4_2:19060291-19060310 None:intergenic 30.0%
TAGCATGACTGAAAATAAGT+AGG + chr4_2:19060292-19060311 None:intergenic 30.0%
AAAAAGGTAGCTGTATTATG+TGG + chr4_2:19060432-19060451 None:intergenic 30.0%
!! ATTGTGTTGCTAAGTACTTT+TGG - chr4_2:19060525-19060544 Msa0593160:intron 30.0%
! ATTTGATGATCTGTAAACAG+GGG - chr4_2:19060566-19060585 Msa0593160:intron 30.0%
AAAAGCCTATAACAGATAAC+AGG + chr4_2:19060638-19060657 None:intergenic 30.0%
AGCCTAATATCCCAATTAAA+AGG - chr4_2:19060694-19060713 Msa0593160:intron 30.0%
!! GAACCTATAGTCTTATATAG+AGG + chr4_2:19060881-19060900 None:intergenic 30.0%
ATAGGTTCGAATCTTTATGT+AGG - chr4_2:19060893-19060912 Msa0593160:intron 30.0%
!! CTTAAATAGATTAGCTTGGT+AGG - chr4_2:19061018-19061037 Msa0593160:intron 30.0%
!!! GTCTATTTGTTTTACAGGTA+AGG + chr4_2:19061169-19061188 None:intergenic 30.0%
AATGTTAAACACGTTATTGC+AGG + chr4_2:19061416-19061435 None:intergenic 30.0%
CAATAACGTGTTTAACATTG+TGG - chr4_2:19061417-19061436 Msa0593160:intron 30.0%
ATCCACTACAAAAGATGATT+TGG - chr4_2:19061538-19061557 Msa0593160:intron 30.0%
! TCGGTCCATAATCAAATTTT+GGG + chr4_2:19061619-19061638 None:intergenic 30.0%
! ATCGGTCCATAATCAAATTT+TGG + chr4_2:19061620-19061639 None:intergenic 30.0%
ATCCTTAACTTCTAATACGA+AGG - chr4_2:19061801-19061820 Msa0593160:intron 30.0%
TTCCTTCGTATTAGAAGTTA+AGG + chr4_2:19061806-19061825 None:intergenic 30.0%
AAATTATTGAAGGGGAATGA+AGG + chr4_2:19061845-19061864 None:intergenic 30.0%
AAGAAGGCAAATTATTGAAG+GGG + chr4_2:19061853-19061872 None:intergenic 30.0%
GAAGAAGGCAAATTATTGAA+GGG + chr4_2:19061854-19061873 None:intergenic 30.0%
! CCAACTTTAGGAGATTATTT+GGG + chr4_2:19061889-19061908 None:intergenic 30.0%
! TCCAACTTTAGGAGATTATT+TGG + chr4_2:19061890-19061909 None:intergenic 30.0%
ATATGTAAAGATGGTTCTTG+AGG - chr4_2:19061957-19061976 Msa0593160:intron 30.0%
! TATTTATGTATTGGTACGCT+TGG - chr4_2:19062040-19062059 Msa0593160:intron 30.0%
ACTACAATAGATGATGCTAT+TGG - chr4_2:19062152-19062171 Msa0593160:intron 30.0%
AAACAACAATCAAAAGTGGA+GGG + chr4_2:19062327-19062346 None:intergenic 30.0%
TTTCATTAGACCAATAGTCT+TGG - chr4_2:19062765-19062784 Msa0593160:intron 30.0%
! TGCCAAAATTCCTATTTCTT+CGG - chr4_2:19062885-19062904 Msa0593160:intron 30.0%
ATAACTAACCTGAAAAGAAG+CGG + chr4_2:19062947-19062966 None:intergenic 30.0%
TTAAAAGGTAAACAAGAGCA+GGG + chr4_2:19063026-19063045 None:intergenic 30.0%
AGCAAAAGACATGAGTTAAA+AGG + chr4_2:19063041-19063060 None:intergenic 30.0%
AATTGCAGTATTACATCTTG+AGG - chr4_2:19063099-19063118 Msa0593160:intron 30.0%
TTGCGTCAAATCAATATGTT+CGG - chr4_2:19063295-19063314 Msa0593160:intron 30.0%
!!! GGACTGTTTTTTAACTGAAT+AGG - chr4_2:19063548-19063567 Msa0593160:intron 30.0%
CCTTCTGTTCATATAATTGT+CGG + chr4_2:19063678-19063697 None:intergenic 30.0%
ATAAAAGGATCGGTTACAAA+TGG + chr4_2:19063817-19063836 None:intergenic 30.0%
ATCATACTGCATAAAAGGAT+CGG + chr4_2:19063827-19063846 None:intergenic 30.0%
TACGCAACATAAATTTATGC+AGG - chr4_2:19063848-19063867 Msa0593160:intron 30.0%
TGAATTAGAGATGTAAGAGA+AGG + chr4_2:19064046-19064065 None:intergenic 30.0%
TTAATCAATGTCACATAAGG+AGG - chr4_2:19064215-19064234 Msa0593160:CDS 30.0%
CAGCTTATTATCTAGTGAGT+AGG - chr4_2:19054187-19054206 Msa0593160:three_prime_UTR 35.0%
TTTGGGAATGAAATTTACGC+GGG + chr4_2:19054301-19054320 None:intergenic 35.0%
GTTTGGGAATGAAATTTACG+CGG + chr4_2:19054302-19054321 None:intergenic 35.0%
!!! GATGGAGATATTGTCGTTTT+GGG - chr4_2:19054414-19054433 Msa0593160:three_prime_UTR 35.0%
! AGTTTAGAGTAGGAAACTGA+TGG - chr4_2:19054813-19054832 Msa0593160:intron 35.0%
! CGTGGTTTGGACATATAATA+AGG - chr4_2:19054851-19054870 Msa0593160:intron 35.0%
AGTAGATTACATGAGTAGTC+AGG - chr4_2:19054876-19054895 Msa0593160:intron 35.0%
GTAGATTACATGAGTAGTCA+GGG - chr4_2:19054877-19054896 Msa0593160:intron 35.0%
! AGATAGGTGAGAAAGAGTAT+GGG - chr4_2:19054934-19054953 Msa0593160:intron 35.0%
!! AGTAGATTTGATGGGTTGTT+TGG - chr4_2:19054981-19055000 Msa0593160:intron 35.0%
!! TAGTGAAGAAAAAGTGCCTA+AGG - chr4_2:19055397-19055416 Msa0593160:intron 35.0%
!! AGAAAAAGTGCCTAAGGATA+AGG - chr4_2:19055403-19055422 Msa0593160:intron 35.0%
!! GAAAAAGTGCCTAAGGATAA+GGG - chr4_2:19055404-19055423 Msa0593160:intron 35.0%
CCATATATACCCTTATCCTT+AGG + chr4_2:19055416-19055435 None:intergenic 35.0%
! CCTAAGGATAAGGGTATATA+TGG - chr4_2:19055413-19055432 Msa0593160:intron 35.0%
TGTGAGAAGAAAGCAAAAAG+TGG - chr4_2:19055479-19055498 Msa0593160:CDS 35.0%
AGAAGAAAGCAAAAAGTGGT+AGG - chr4_2:19055483-19055502 Msa0593160:CDS 35.0%
GAAGAAAGCAAAAAGTGGTA+GGG - chr4_2:19055484-19055503 Msa0593160:CDS 35.0%
CTTATTTCACTAAATGGGGT+TGG + chr4_2:19055741-19055760 None:intergenic 35.0%
!! CTTCAGATTGAAGCTGTTTT+TGG - chr4_2:19055802-19055821 Msa0593160:intron 35.0%
CGATTTATGTATCTGTGTAG+TGG - chr4_2:19055928-19055947 Msa0593160:intron 35.0%
CATTGGCAAAGATATCAGAT+AGG - chr4_2:19056421-19056440 Msa0593160:CDS 35.0%
! CAGTTGTTGCCTTAATTTTC+AGG + chr4_2:19056470-19056489 None:intergenic 35.0%
! TGTTAGGAGAATTTTCTCTC+TGG + chr4_2:19056611-19056630 None:intergenic 35.0%
CTGTTATAAAAGAGAGGGTA+AGG + chr4_2:19056669-19056688 None:intergenic 35.0%
GGGACAATAATGTTATTCTG+TGG - chr4_2:19057271-19057290 Msa0593160:CDS 35.0%
TCGCTTTCTGCTTAATGATT+AGG - chr4_2:19057299-19057318 Msa0593160:intron 35.0%
TTAGACAAGCACTAGTAAGA+TGG + chr4_2:19057883-19057902 None:intergenic 35.0%
CAGGTTCTGTTTAAAGGAAT+TGG + chr4_2:19057915-19057934 None:intergenic 35.0%
CAATTCCTTTAAACAGAACC+TGG - chr4_2:19057913-19057932 Msa0593160:intron 35.0%
AAAGTTAATAGTATGCCACC+AGG + chr4_2:19057934-19057953 None:intergenic 35.0%
ACTCAACAACCATTATCCTA+GGG + chr4_2:19057971-19057990 None:intergenic 35.0%
TCTCCAACAGATTTCTCATA+TGG - chr4_2:19058001-19058020 Msa0593160:intron 35.0%
AAGCCATATGAGAAATCTGT+TGG + chr4_2:19058007-19058026 None:intergenic 35.0%
GACAAAACTGAGACAGAAAA+CGG + chr4_2:19058036-19058055 None:intergenic 35.0%
TTAGACAAGCACTAGTAAGA+TGG + chr4_2:19057883-19057902 None:intergenic 35.0%
CAGGTTCTGTTTAAAGGAAT+TGG + chr4_2:19057915-19057934 None:intergenic 35.0%
CAATTCCTTTAAACAGAACC+TGG - chr4_2:19057913-19057932 Msa0593160:intron 35.0%
AAAGTTAATAGTATGCCACC+AGG + chr4_2:19057934-19057953 None:intergenic 35.0%
ACTCAACAACCATTATCCTA+GGG + chr4_2:19057971-19057990 None:intergenic 35.0%
TCTCCAACAGATTTCTCATA+TGG - chr4_2:19058001-19058020 Msa0593160:intron 35.0%
AAGCCATATGAGAAATCTGT+TGG + chr4_2:19058007-19058026 None:intergenic 35.0%
ACTGAGATAGAAAACGGTAT+AGG + chr4_2:19058520-19058539 None:intergenic 35.0%
TGCACGTGTAACTCAATAAA+GGG + chr4_2:19058564-19058583 None:intergenic 35.0%
ATGCACGTGTAACTCAATAA+AGG + chr4_2:19058565-19058584 None:intergenic 35.0%
TCATCAAAGTTGTCACCAAA+TGG + chr4_2:19058998-19059017 None:intergenic 35.0%
AAGATAGTGCTTGTAAGAGT+TGG - chr4_2:19059172-19059191 Msa0593160:intron 35.0%
AGATAGTGCTTGTAAGAGTT+GGG - chr4_2:19059173-19059192 Msa0593160:intron 35.0%
AGAAAAGCGATGAAAAGTGA+AGG - chr4_2:19059406-19059425 Msa0593160:intron 35.0%
CATCTAGCAGCTTCTATATT+AGG + chr4_2:19059635-19059654 None:intergenic 35.0%
! TAGTGTATTTTTCTCTGGCA+GGG + chr4_2:19059678-19059697 None:intergenic 35.0%
! TTAGTGTATTTTTCTCTGGC+AGG + chr4_2:19059679-19059698 None:intergenic 35.0%
AATCTGATTGTTCGAACTCT+AGG - chr4_2:19059759-19059778 Msa0593160:intron 35.0%
GAGTACTTTAAGTCGGAAAT+AGG + chr4_2:19059792-19059811 None:intergenic 35.0%
! CGACTTAAAGTACTCATTGA+AGG - chr4_2:19059797-19059816 Msa0593160:intron 35.0%
TGATCTTCTGTATGCTTTAG+AGG - chr4_2:19059837-19059856 Msa0593160:intron 35.0%
TATTAATTAGAGGGCCACTA+TGG + chr4_2:19060011-19060030 None:intergenic 35.0%
! TATTCCTGTTCACCTGTTTT+TGG - chr4_2:19060242-19060261 Msa0593160:intron 35.0%
AACAACAATTTCACAACCCA+AGG + chr4_2:19060354-19060373 None:intergenic 35.0%
!!! GTTTCTAGTTTTACTTCTCG+AGG - chr4_2:19060371-19060390 Msa0593160:intron 35.0%
! CTCGAGGAATTTGTATTTTC+TGG - chr4_2:19060387-19060406 Msa0593160:intron 35.0%
!! TTTGTATTTTCTGGCGTTTG+TGG - chr4_2:19060396-19060415 Msa0593160:intron 35.0%
!! TTGTATTTTCTGGCGTTTGT+GGG - chr4_2:19060397-19060416 Msa0593160:intron 35.0%
TAATCTGTCCAAAATGGTAC+AGG + chr4_2:19060460-19060479 None:intergenic 35.0%
CAACACAATCAAAACAGTGA+AGG + chr4_2:19060514-19060533 None:intergenic 35.0%
CATTCAAAAATGCCAAGTCA+TGG + chr4_2:19060666-19060685 None:intergenic 35.0%
!! CGCCTTTTAATTGGGATATT+AGG + chr4_2:19060699-19060718 None:intergenic 35.0%
CAAGCTAGACTTATCAGTTA+AGG + chr4_2:19061108-19061127 None:intergenic 35.0%
CTTAACTGATAAGTCTAGCT+TGG - chr4_2:19061106-19061125 Msa0593160:intron 35.0%
CATAGCCAATGTTGAACAAA+CGG + chr4_2:19061380-19061399 None:intergenic 35.0%
! TTGTTCAACATTGGCTATGT+AGG - chr4_2:19061381-19061400 Msa0593160:intron 35.0%
TTGTGGCAATTATTGCACTT+AGG - chr4_2:19061434-19061453 Msa0593160:intron 35.0%
TGTTCTCTCAAAAGTAGTCA+TGG + chr4_2:19061488-19061507 None:intergenic 35.0%
!! ATGACTACTTTTGAGAGAAC+AGG - chr4_2:19061487-19061506 Msa0593160:intron 35.0%
! AGCCAAATCATCTTTTGTAG+TGG + chr4_2:19061543-19061562 None:intergenic 35.0%
! ACTACAAAAGATGATTTGGC+TGG - chr4_2:19061542-19061561 Msa0593160:intron 35.0%
! GTTACTCGTGAAGTATTCAT+CGG + chr4_2:19061638-19061657 None:intergenic 35.0%
!! TCATGTTTGTTGGCTTTGTA+TGG + chr4_2:19061660-19061679 None:intergenic 35.0%
AAAGCCAACAAACATGAACA+AGG - chr4_2:19061663-19061682 Msa0593160:intron 35.0%
CAAACCTTGTTCATGTTTGT+TGG + chr4_2:19061670-19061689 None:intergenic 35.0%
GGAAGAAGGCAAATTATTGA+AGG + chr4_2:19061855-19061874 None:intergenic 35.0%
! CTTTAGGAGATTATTTGGGA+GGG + chr4_2:19061885-19061904 None:intergenic 35.0%
! ACTTTAGGAGATTATTTGGG+AGG + chr4_2:19061886-19061905 None:intergenic 35.0%
CCCAAATAATCTCCTAAAGT+TGG - chr4_2:19061886-19061905 Msa0593160:intron 35.0%
TTGAAACTGTCTCCAACTTT+AGG + chr4_2:19061901-19061920 None:intergenic 35.0%
AACAATGACTGTCAAATCAG+AGG + chr4_2:19062015-19062034 None:intergenic 35.0%
CTTATGACAAGTCAGCAAAA+TGG - chr4_2:19062180-19062199 Msa0593160:intron 35.0%
! AATGGCTTGGACTTGATATA+AGG - chr4_2:19062198-19062217 Msa0593160:intron 35.0%
AACAACAATCAAAAGTGGAG+GGG + chr4_2:19062326-19062345 None:intergenic 35.0%
GAAACAACAATCAAAAGTGG+AGG + chr4_2:19062328-19062347 None:intergenic 35.0%
GGAGAAACAACAATCAAAAG+TGG + chr4_2:19062331-19062350 None:intergenic 35.0%
TCTAAAAACCCAAGTAAGAC+TGG - chr4_2:19062485-19062504 Msa0593160:intron 35.0%
AAGCGCTTGTGATAAGAAAA+AGG + chr4_2:19062625-19062644 None:intergenic 35.0%
! TGCCGAAGAAATAGGAATTT+TGG + chr4_2:19062890-19062909 None:intergenic 35.0%
TCATTACTTGCCGAAGAAAT+AGG + chr4_2:19062898-19062917 None:intergenic 35.0%
! CAGGTTAGTTATACTTCTGT+AGG - chr4_2:19062955-19062974 Msa0593160:intron 35.0%
GTTAAAAGGTAAACAAGAGC+AGG + chr4_2:19063027-19063046 None:intergenic 35.0%
CAGTATTACATCTTGAGGAA+AGG - chr4_2:19063104-19063123 Msa0593160:intron 35.0%
ACTACCAGATGTCTTATAGA+AGG + chr4_2:19063166-19063185 None:intergenic 35.0%
TGCGTCAAATCAATATGTTC+GGG - chr4_2:19063296-19063315 Msa0593160:intron 35.0%
AATGAAGGCTAACTCTATCT+AGG - chr4_2:19063425-19063444 Msa0593160:intron 35.0%
AAACATACCAGAAAGTCTTC+TGG + chr4_2:19063647-19063666 None:intergenic 35.0%
CCGACAATTATATGAACAGA+AGG - chr4_2:19063675-19063694 Msa0593160:intron 35.0%
CGTACATCATACTGCATAAA+AGG + chr4_2:19063832-19063851 None:intergenic 35.0%
TTGATTATATCGGGTTTAGC+GGG + chr4_2:19064173-19064192 None:intergenic 35.0%
CTTGATTATATCGGGTTTAG+CGG + chr4_2:19064174-19064193 None:intergenic 35.0%
GAAGAAATGAGTTTCAGCAC+TGG + chr4_2:19054224-19054243 None:intergenic 40.0%
GATGTGAAGAGTGAAGGTTT+GGG + chr4_2:19054318-19054337 None:intergenic 40.0%
AGATGTGAAGAGTGAAGGTT+TGG + chr4_2:19054319-19054338 None:intergenic 40.0%
GTTTGTGGGGAAGATGAATT+CGG + chr4_2:19054347-19054366 None:intergenic 40.0%
! ACAATATCTCCATCGCGTTT+TGG + chr4_2:19054408-19054427 None:intergenic 40.0%
!! CGATGGAGATATTGTCGTTT+TGG - chr4_2:19054413-19054432 Msa0593160:three_prime_UTR 40.0%
TTGGTTTAGGTGAGAAGTGA+CGG - chr4_2:19054552-19054571 Msa0593160:exon 40.0%
GTACCTGAGAAGATATCACT+TGG + chr4_2:19054590-19054609 None:intergenic 40.0%
! ACACCTTTGATCAGAAGTGT+TGG - chr4_2:19054708-19054727 Msa0593160:intron 40.0%
GTACCAACACTTCTGATCAA+AGG + chr4_2:19054714-19054733 None:intergenic 40.0%
!! CTTTTGATCAAAGGTGTGTC+TGG + chr4_2:19054749-19054768 None:intergenic 40.0%
!! GCATCGACACTTTTGATCAA+AGG + chr4_2:19054758-19054777 None:intergenic 40.0%
GGAAACTGATGGTAGAAACT+AGG - chr4_2:19054824-19054843 Msa0593160:intron 40.0%
GAAAGTGAGAAGAGAGAGAT+AGG - chr4_2:19054918-19054937 Msa0593160:intron 40.0%
GAGATAGGTGAGAAAGAGTA+TGG - chr4_2:19054933-19054952 Msa0593160:intron 40.0%
TTGAAGTTCCTTGGAGACAT+GGG + chr4_2:19055368-19055387 None:intergenic 40.0%
TACTGATGGTTGAAGTTCCT+TGG + chr4_2:19055377-19055396 None:intergenic 40.0%
TGTTTGGAAGGAGAGAGTTA+GGG + chr4_2:19055610-19055629 None:intergenic 40.0%
TCCTTCCAAACACAGTGTAA+AGG - chr4_2:19055618-19055637 Msa0593160:intron 40.0%
!! GACTTGGTTGTTGTTTGAGT+TGG - chr4_2:19055760-19055779 Msa0593160:intron 40.0%
! AGCTTCAATCTGAAGTGTCA+TGG + chr4_2:19055797-19055816 None:intergenic 40.0%
!!! TTGAAGCTGTTTTTGGTGTC+CGG - chr4_2:19055809-19055828 Msa0593160:intron 40.0%
CATATAACACCAACACATGC+CGG + chr4_2:19055831-19055850 None:intergenic 40.0%
ATTAGATTGCAGCAGATGTC+TGG - chr4_2:19056333-19056352 Msa0593160:intron 40.0%
TGGCAAAGATATCAGATAGG+TGG - chr4_2:19056424-19056443 Msa0593160:CDS 40.0%
GGCAAAGATATCAGATAGGT+GGG - chr4_2:19056425-19056444 Msa0593160:CDS 40.0%
AGAGGTTAAGAGCTCTACAA+TGG - chr4_2:19056514-19056533 Msa0593160:CDS 40.0%
! AGGAGAATTTTCTCTCTGGT+AGG + chr4_2:19056607-19056626 None:intergenic 40.0%
GTCCATTCAGCTTGGTTATT+GGG - chr4_2:19056746-19056765 Msa0593160:intron 40.0%
ATCCCAATAACCAAGCTGAA+TGG + chr4_2:19056751-19056770 None:intergenic 40.0%
ATGAAGAACTGACACATGCA+TGG + chr4_2:19056960-19056979 None:intergenic 40.0%
ACAACTTATGGGACAACCAA+AGG - chr4_2:19057010-19057029 Msa0593160:intron 40.0%
TCTTACTCTCTCTATTGCTC+TGG + chr4_2:19057068-19057087 None:intergenic 40.0%
!!! TGAGCTTCTTCTGCCATTTT+TGG + chr4_2:19057437-19057456 None:intergenic 40.0%
TCACTCACAAGTGATAGATC+AGG - chr4_2:19057454-19057473 Msa0593160:intron 40.0%
ATCTAATTGTGCGAACTTCG+AGG - chr4_2:19057574-19057593 Msa0593160:intron 40.0%
TGGTTTGAGCTTAAGGGATA+AGG + chr4_2:19057771-19057790 None:intergenic 40.0%
!! CTCAACTGGTTTGAGCTTAA+GGG + chr4_2:19057777-19057796 None:intergenic 40.0%
! CATAAACATAATGGGGGCTT+GGG + chr4_2:19057803-19057822 None:intergenic 40.0%
! ACATAAACATAATGGGGGCT+TGG + chr4_2:19057804-19057823 None:intergenic 40.0%
TTCCTTTAAACAGAACCTGG+TGG - chr4_2:19057916-19057935 Msa0593160:intron 40.0%
CACTCAACAACCATTATCCT+AGG + chr4_2:19057972-19057991 None:intergenic 40.0%
AAATCTGTTGGAGAACCTAG+TGG + chr4_2:19057995-19058014 None:intergenic 40.0%
ACTGAGACAGAAAACGGTAT+AGG + chr4_2:19058030-19058049 None:intergenic 40.0%
ATCTAATTGTGCGAACTTCG+AGG - chr4_2:19057574-19057593 Msa0593160:intron 40.0%
TGGTTTGAGCTTAAGGGATA+AGG + chr4_2:19057771-19057790 None:intergenic 40.0%
!! CTCAACTGGTTTGAGCTTAA+GGG + chr4_2:19057777-19057796 None:intergenic 40.0%
! CATAAACATAATGGGGGCTT+GGG + chr4_2:19057803-19057822 None:intergenic 40.0%
! ACATAAACATAATGGGGGCT+TGG + chr4_2:19057804-19057823 None:intergenic 40.0%
TTCCTTTAAACAGAACCTGG+TGG - chr4_2:19057916-19057935 Msa0593160:intron 40.0%
CACTCAACAACCATTATCCT+AGG + chr4_2:19057972-19057991 None:intergenic 40.0%
AAATCTGTTGGAGAACCTAG+TGG + chr4_2:19057995-19058014 None:intergenic 40.0%
TAACTCAATAAAGGGGGAAG+GGG + chr4_2:19058556-19058575 None:intergenic 40.0%
GTAACTCAATAAAGGGGGAA+GGG + chr4_2:19058557-19058576 None:intergenic 40.0%
TGTAACTCAATAAAGGGGGA+AGG + chr4_2:19058558-19058577 None:intergenic 40.0%
CACGTGTAACTCAATAAAGG+GGG + chr4_2:19058562-19058581 None:intergenic 40.0%
GCACGTGTAACTCAATAAAG+GGG + chr4_2:19058563-19058582 None:intergenic 40.0%
AAGTTCGAGTATTACCACGA+AGG + chr4_2:19058700-19058719 None:intergenic 40.0%
TCAACGTTAATGTCAGGGTT+CGG - chr4_2:19059566-19059585 Msa0593160:intron 40.0%
TTGTACAAGACATGGACAGA+TGG + chr4_2:19059886-19059905 None:intergenic 40.0%
CATGTCTTGTACAATGCAGT+CGG - chr4_2:19059892-19059911 Msa0593160:intron 40.0%
ATGTCTTGTACAATGCAGTC+GGG - chr4_2:19059893-19059912 Msa0593160:intron 40.0%
AAATAAGTAGGGCCATGAAC+GGG + chr4_2:19060215-19060234 None:intergenic 40.0%
GAAATAAGTAGGGCCATGAA+CGG + chr4_2:19060216-19060235 None:intergenic 40.0%
TTCATGGCCCTACTTATTTC+AGG - chr4_2:19060216-19060235 Msa0593160:intron 40.0%
TCAACCAAAAACAGGTGAAC+AGG + chr4_2:19060249-19060268 None:intergenic 40.0%
AAAACAGTGAAGGATCAAGC+AGG + chr4_2:19060504-19060523 None:intergenic 40.0%
AAACAGGGGTGAGAATAGAT+TGG - chr4_2:19060580-19060599 Msa0593160:intron 40.0%
AACAGGGGTGAGAATAGATT+GGG - chr4_2:19060581-19060600 Msa0593160:intron 40.0%
! ACTTGGCATTTTTGAATGCC+AGG - chr4_2:19060668-19060687 Msa0593160:intron 40.0%
! ATTAGCTTGGTAGGCCTAAT+AGG - chr4_2:19061027-19061046 Msa0593160:intron 40.0%
GCTTGGACTTGATAAAGGTT+AGG - chr4_2:19061128-19061147 Msa0593160:intron 40.0%
!!! TGCGCGTCTATTTGTTTTAC+AGG + chr4_2:19061174-19061193 None:intergenic 40.0%
CGCATTGTGAATGATACAGT+TGG - chr4_2:19061190-19061209 Msa0593160:CDS 40.0%
TGTGAATGATACAGTTGGCA+AGG - chr4_2:19061195-19061214 Msa0593160:CDS 40.0%
GTGAATGATACAGTTGGCAA+GGG - chr4_2:19061196-19061215 Msa0593160:CDS 40.0%
CTTTCATGGTCTATGCATGT+GGG + chr4_2:19061290-19061309 None:intergenic 40.0%
TCTTTCATGGTCTATGCATG+TGG + chr4_2:19061291-19061310 None:intergenic 40.0%
CATGCATAGACCATGAAAGA+TGG - chr4_2:19061291-19061310 Msa0593160:intron 40.0%
CATAGACCATGAAAGATGGT+TGG - chr4_2:19061295-19061314 Msa0593160:intron 40.0%
! ACCATGAAAGATGGTTGGTT+GGG - chr4_2:19061300-19061319 Msa0593160:intron 40.0%
TACGTCGACATCTAATCCTT+GGG + chr4_2:19061335-19061354 None:intergenic 40.0%
TTACGTCGACATCTAATCCT+TGG + chr4_2:19061336-19061355 None:intergenic 40.0%
AGGATTAGATGTCGACGTAA+TGG - chr4_2:19061336-19061355 Msa0593160:intron 40.0%
! TTCAACATTGGCTATGTAGG+AGG - chr4_2:19061384-19061403 Msa0593160:intron 40.0%
ACAGAAAGGTTTACCATGCA+GGG - chr4_2:19061570-19061589 Msa0593160:intron 40.0%
TTACCATGCAGGGTTCAAAT+TGG - chr4_2:19061580-19061599 Msa0593160:intron 40.0%
TACCATGCAGGGTTCAAATT+GGG - chr4_2:19061581-19061600 Msa0593160:intron 40.0%
TCATTCTTGCACGTGATCTT+GGG - chr4_2:19062111-19062130 Msa0593160:intron 40.0%
CTTGGGCAATACATACAACT+TGG - chr4_2:19062128-19062147 Msa0593160:intron 40.0%
AATAGATGATGCTATTGGCG+AGG - chr4_2:19062157-19062176 Msa0593160:intron 40.0%
GGACTTGATATAAGGAGAAG+TGG - chr4_2:19062206-19062225 Msa0593160:intron 40.0%
CTTGATATAAGGAGAAGTGG+TGG - chr4_2:19062209-19062228 Msa0593160:intron 40.0%
GATTGCAACTTCTCTTATGC+TGG - chr4_2:19062462-19062481 Msa0593160:intron 40.0%
CTCAATTGCCAGTCTTACTT+GGG + chr4_2:19062496-19062515 None:intergenic 40.0%
ACTCAATTGCCAGTCTTACT+TGG + chr4_2:19062497-19062516 None:intergenic 40.0%
!! TGATATTGCCGCTTCTTTTC+AGG - chr4_2:19062936-19062955 Msa0593160:intron 40.0%
!! AATTCAGTGGGCATTGAAGA+TGG - chr4_2:19063138-19063157 Msa0593160:intron 40.0%
GCAACAGACAAGACATAGAA+TGG + chr4_2:19063257-19063276 None:intergenic 40.0%
TTCTATGTCTTGTCTGTTGC+AGG - chr4_2:19063257-19063276 Msa0593160:intron 40.0%
GATACGGTTGTGAAGAAGAA+TGG - chr4_2:19063327-19063346 Msa0593160:intron 40.0%
GAATAGGTGTAATGGTTGCT+TGG - chr4_2:19063564-19063583 Msa0593160:intron 40.0%
AGAAGAACCAGAAGACTTTC+TGG - chr4_2:19063637-19063656 Msa0593160:intron 40.0%
TTTCAGTCGCTCCTTAAGAA+CGG - chr4_2:19064009-19064028 Msa0593160:intron 40.0%
! ATGAATTCGTGCCGTTCTTA+AGG + chr4_2:19064023-19064042 None:intergenic 40.0%
TCCAAGATAGTGACTTCATG+AGG + chr4_2:19064116-19064135 None:intergenic 40.0%
!! GGTTTTCTGGTGATACTGTT+TGG + chr4_2:19064151-19064170 None:intergenic 40.0%
TGATTATATCGGGTTTAGCG+GGG + chr4_2:19064172-19064191 None:intergenic 40.0%
GAAAACGTCACAATAGTGGT+TGG - chr4_2:19064237-19064256 Msa0593160:CDS 40.0%
GAGCCAAGTGATATCTTCTC+AGG - chr4_2:19054584-19054603 Msa0593160:CDS 45.0%
TGGTAGAAACTAGGCTTACG+TGG - chr4_2:19054833-19054852 Msa0593160:intron 45.0%
GAAACTAGGCTTACGTGGTT+TGG - chr4_2:19054838-19054857 Msa0593160:intron 45.0%
ATGAGTAGTCAGGGTGTGTT+TGG - chr4_2:19054886-19054905 Msa0593160:intron 45.0%
GGCACAAATCTGTCATAGTG+TGG + chr4_2:19055347-19055366 None:intergenic 45.0%
GTTGAAGTTCCTTGGAGACA+TGG + chr4_2:19055369-19055388 None:intergenic 45.0%
GTGTTTGGAAGGAGAGAGTT+AGG + chr4_2:19055611-19055630 None:intergenic 45.0%
GCCTTTACACTGTGTTTGGA+AGG + chr4_2:19055622-19055641 None:intergenic 45.0%
TCCAAACACAGTGTAAAGGC+AGG - chr4_2:19055622-19055641 Msa0593160:intron 45.0%
CCAAACACAGTGTAAAGGCA+GGG - chr4_2:19055623-19055642 Msa0593160:intron 45.0%
CAAACACAGTGTAAAGGCAG+GGG - chr4_2:19055624-19055643 Msa0593160:intron 45.0%
!! ACTAAATGGGGTTGGCTACA+TGG + chr4_2:19055733-19055752 None:intergenic 45.0%
!! CGGCATGTGTTGGTGTTATA+TGG - chr4_2:19055829-19055848 Msa0593160:intron 45.0%
CAACACTGACACATGAACAC+CGG + chr4_2:19055901-19055920 None:intergenic 45.0%
! GGTCTAGTGCATTTTCCATG+CGG - chr4_2:19056398-19056417 Msa0593160:CDS 45.0%
ATATCTTTGCCAATGCCGCA+TGG + chr4_2:19056416-19056435 None:intergenic 45.0%
GGTTAAGAGCTCTACAATGG+TGG - chr4_2:19056517-19056536 Msa0593160:CDS 45.0%
CTTATTCCCTCCATTCAGCT+TGG - chr4_2:19056724-19056743 Msa0593160:intron 45.0%
AATGGACCAAGCTGAATGGA+GGG + chr4_2:19056733-19056752 None:intergenic 45.0%
GGTCCATTCAGCTTGGTTAT+TGG - chr4_2:19056745-19056764 Msa0593160:intron 45.0%
! ACGTCTTCGATCAGAAGTGT+AGG + chr4_2:19056825-19056844 None:intergenic 45.0%
! ACGTGATGAGAGTGTGAGAT+AGG - chr4_2:19057088-19057107 Msa0593160:intron 45.0%
! CGTGATGAGAGTGTGAGATA+GGG - chr4_2:19057089-19057108 Msa0593160:intron 45.0%
TATCCCTGATTGAGCACATC+AGG - chr4_2:19057511-19057530 Msa0593160:intron 45.0%
ATCCCTGATTGAGCACATCA+GGG - chr4_2:19057512-19057531 Msa0593160:intron 45.0%
! GAACTTCGAGGCTTTGTATG+AGG - chr4_2:19057586-19057605 Msa0593160:intron 45.0%
GATAAGGAGTTGGATGTCCT+GGG + chr4_2:19057755-19057774 None:intergenic 45.0%
GAGCTTAAGGGATAAGGAGT+TGG + chr4_2:19057765-19057784 None:intergenic 45.0%
!! GCTCAACTGGTTTGAGCTTA+AGG + chr4_2:19057778-19057797 None:intergenic 45.0%
TGCCACCAGGTTCTGTTTAA+AGG + chr4_2:19057921-19057940 None:intergenic 45.0%
! TTTGAGTTACTTTGGGCCCT+AGG - chr4_2:19057952-19057971 Msa0593160:intron 45.0%
TACTTTGGGCCCTAGGATAA+TGG - chr4_2:19057959-19057978 Msa0593160:intron 45.0%
! AATGGTTGTTGAGTGCCACT+AGG - chr4_2:19057977-19057996 Msa0593160:intron 45.0%
! GAACTTCGAGGCTTTGTATG+AGG - chr4_2:19057586-19057605 Msa0593160:intron 45.0%
GATAAGGAGTTGGATGTCCT+GGG + chr4_2:19057755-19057774 None:intergenic 45.0%
GAGCTTAAGGGATAAGGAGT+TGG + chr4_2:19057765-19057784 None:intergenic 45.0%
!! GCTCAACTGGTTTGAGCTTA+AGG + chr4_2:19057778-19057797 None:intergenic 45.0%
TGCCACCAGGTTCTGTTTAA+AGG + chr4_2:19057921-19057940 None:intergenic 45.0%
! TTTGAGTTACTTTGGGCCCT+AGG - chr4_2:19057952-19057971 Msa0593160:intron 45.0%
TACTTTGGGCCCTAGGATAA+TGG - chr4_2:19057959-19057978 Msa0593160:intron 45.0%
! AATGGTTGTTGAGTGCCACT+AGG - chr4_2:19057977-19057996 Msa0593160:intron 45.0%
AACTCAATAAAGGGGGAAGG+GGG + chr4_2:19058555-19058574 None:intergenic 45.0%
GACTGAGAAGGATCTTACTG+CGG - chr4_2:19058640-19058659 Msa0593160:CDS 45.0%
! ACTGCGGTTGCTGTTACTAT+TGG - chr4_2:19058656-19058675 Msa0593160:CDS 45.0%
! GGTTGCTGTTACTATTGGTC+CGG - chr4_2:19058661-19058680 Msa0593160:CDS 45.0%
! GTTGCTGTTACTATTGGTCC+GGG - chr4_2:19058662-19058681 Msa0593160:CDS 45.0%
GATTGTTCGAACTCTAGGCA+TGG - chr4_2:19059764-19059783 Msa0593160:intron 45.0%
CGACTGCATTGTACAAGACA+TGG + chr4_2:19059894-19059913 None:intergenic 45.0%
TGTCTTGTACAATGCAGTCG+GGG - chr4_2:19059894-19059913 Msa0593160:intron 45.0%
!! ATGTGATGGACGCCAACAAT+TGG + chr4_2:19059958-19059977 None:intergenic 45.0%
AATTGTTGGCGTCCATCACA+TGG - chr4_2:19059957-19059976 Msa0593160:CDS 45.0%
! TTTTCTTCCTGTGGATGCAG+AGG - chr4_2:19060036-19060055 Msa0593160:intron 45.0%
AGATTTGCAGTTCCCGTTCA+TGG - chr4_2:19060200-19060219 Msa0593160:intron 45.0%
!!! GGGCCATGAGTATTTTTGGT+CGG + chr4_2:19060607-19060626 None:intergenic 45.0%
! GCTTGGGCCATGAGTATTTT+TGG + chr4_2:19060611-19060630 None:intergenic 45.0%
CCTATAACAGATAACAGGCC+AGG + chr4_2:19060633-19060652 None:intergenic 45.0%
CCTGGCCTGTTATCTGTTAT+AGG - chr4_2:19060630-19060649 Msa0593160:intron 45.0%
! GGCTTTTTGTAGCCATGACT+TGG - chr4_2:19060651-19060670 Msa0593160:intron 45.0%
TTGGGATATTAGGCTAGACC+TGG + chr4_2:19060689-19060708 None:intergenic 45.0%
!! ATCCCAATTAAAAGGCGCTG+TGG - chr4_2:19060702-19060721 Msa0593160:intron 45.0%
!! TCCCAATTAAAAGGCGCTGT+GGG - chr4_2:19060703-19060722 Msa0593160:intron 45.0%
!! ACCCACAGCGCCTTTTAATT+GGG + chr4_2:19060707-19060726 None:intergenic 45.0%
GGCCTAATAGGCTCTTTGAA+TGG - chr4_2:19061039-19061058 Msa0593160:intron 45.0%
GGCCATTCAAAGAGCCTATT+AGG + chr4_2:19061044-19061063 None:intergenic 45.0%
! CTGATAAGTCTAGCTTGGCT+TGG - chr4_2:19061111-19061130 Msa0593160:intron 45.0%
!! GCTTGGCTTGGACTTGATAA+AGG - chr4_2:19061123-19061142 Msa0593160:intron 45.0%
AGGTAAGGGTGAGAAGTCTA+TGG + chr4_2:19061154-19061173 None:intergenic 45.0%
GACCATGAAAGATGGTTGGT+TGG - chr4_2:19061299-19061318 Msa0593160:intron 45.0%
!! GACGTAATGGACTCAATTGC+AGG - chr4_2:19061349-19061368 Msa0593160:intron 45.0%
!! GTAATGGACTCAATTGCAGG+TGG - chr4_2:19061352-19061371 Msa0593160:intron 45.0%
TGGAGCCGTTTGTTCAACAT+TGG - chr4_2:19061372-19061391 Msa0593160:intron 45.0%
!! ACTTTTGAGAGAACAGGCAG+AGG - chr4_2:19061493-19061512 Msa0593160:intron 45.0%
TTTGGCTGGTAGACACAGAA+AGG - chr4_2:19061556-19061575 Msa0593160:intron 45.0%
CACAGAAAGGTTTACCATGC+AGG - chr4_2:19061569-19061588 Msa0593160:intron 45.0%
ACCATGCAGGGTTCAAATTG+GGG - chr4_2:19061582-19061601 Msa0593160:intron 45.0%
ATTATTTGGGAGGGCAACAC+AGG + chr4_2:19061876-19061895 None:intergenic 45.0%
ATCAGAGGTTTGCAACAGAC+TGG + chr4_2:19062000-19062019 None:intergenic 45.0%
CTCATTCTTGCACGTGATCT+TGG - chr4_2:19062110-19062129 Msa0593160:intron 45.0%
GACAAGTCAGCAAAATGGCT+TGG - chr4_2:19062185-19062204 Msa0593160:intron 45.0%
TTAGCAAGCTCCTCTATAGC+AGG + chr4_2:19062236-19062255 None:intergenic 45.0%
!! TGCTATAGAGGAGCTTGCTA+AGG - chr4_2:19062235-19062254 Msa0593160:intron 45.0%
!! TATAGAGGAGCTTGCTAAGG+AGG - chr4_2:19062238-19062257 Msa0593160:intron 45.0%
!! ATAGAGGAGCTTGCTAAGGA+GGG - chr4_2:19062239-19062258 Msa0593160:intron 45.0%
ACAATCAAAAGTGGAGGGGA+GGG + chr4_2:19062322-19062341 None:intergenic 45.0%
AACAATCAAAAGTGGAGGGG+AGG + chr4_2:19062323-19062342 None:intergenic 45.0%
! CACCAATAGAAGCACAACAG+CGG + chr4_2:19062392-19062411 None:intergenic 45.0%
!! GTTTGCTGTAGGTTCCAATG+AGG - chr4_2:19062430-19062449 Msa0593160:intron 45.0%
CAATCCTTATGCTGCCTCAT+TGG + chr4_2:19062447-19062466 None:intergenic 45.0%
ATCTTGCAGGCCAAGACTAT+TGG + chr4_2:19062778-19062797 None:intergenic 45.0%
GTGTGAACGAGCAATTCAGT+GGG - chr4_2:19063126-19063145 Msa0593160:intron 45.0%
GGAGCCTTCTATAAGACATC+TGG - chr4_2:19063159-19063178 Msa0593160:intron 45.0%
TACCATTGTCGGTACAAAGC+CGG + chr4_2:19063377-19063396 None:intergenic 45.0%
!! AAGTCTTCTGGTTCTTCTGC+AGG + chr4_2:19063635-19063654 None:intergenic 45.0%
TTCAGTATGATGTACGCCCA+AGG - chr4_2:19063951-19063970 Msa0593160:intron 45.0%
TTCATGAGGCTGAAGCAACA+CGG + chr4_2:19064102-19064121 None:intergenic 45.0%
GCCTCATGAAGTCACTATCT+TGG - chr4_2:19064112-19064131 Msa0593160:intron 45.0%
GGAGGAAAACGTCACAATAG+TGG - chr4_2:19064233-19064252 Msa0593160:CDS 45.0%
CGGAGAGATGTGAAGAGTGA+AGG + chr4_2:19054324-19054343 None:intergenic 50.0%
TGTGGGGAAGATGAATTCGG+CGG + chr4_2:19054344-19054363 None:intergenic 50.0%
!!! CGCGTTTTGGAGTTCGGTTA+GGG + chr4_2:19054395-19054414 None:intergenic 50.0%
!!! TCGCGTTTTGGAGTTCGGTT+AGG + chr4_2:19054396-19054415 None:intergenic 50.0%
AACCGAACTCCAAAACGCGA+TGG - chr4_2:19054396-19054415 Msa0593160:three_prime_UTR 50.0%
!!! CTCCATCGCGTTTTGGAGTT+CGG + chr4_2:19054401-19054420 None:intergenic 50.0%
!! TTGAAGCGTTGGACACGTGT+TGG - chr4_2:19054676-19054695 Msa0593160:intron 50.0%
GATTTGTGCCCATGTCTCCA+AGG - chr4_2:19055357-19055376 Msa0593160:intron 50.0%
TTGTTTGGCAGTGCAGTGAG+AGG + chr4_2:19055536-19055555 None:intergenic 50.0%
TTGGAAGGAGAGAGTTAGGG+AGG + chr4_2:19055607-19055626 None:intergenic 50.0%
CCCTGCCTTTACACTGTGTT+TGG + chr4_2:19055626-19055645 None:intergenic 50.0%
!!! TTTTGGTGTCCGGCATGTGT+TGG - chr4_2:19055819-19055838 Msa0593160:intron 50.0%
! GTGCATTTTCCATGCGGCAT+TGG - chr4_2:19056404-19056423 Msa0593160:CDS 50.0%
TAGGAGCTTTGCTCGGGAAT+AGG + chr4_2:19056588-19056607 None:intergenic 50.0%
TCTCTGGTAGGAGCTTTGCT+CGG + chr4_2:19056595-19056614 None:intergenic 50.0%
TAAAAGAGAGGGTAAGGGCG+TGG + chr4_2:19056663-19056682 None:intergenic 50.0%
GAATGGACCAAGCTGAATGG+AGG + chr4_2:19056734-19056753 None:intergenic 50.0%
GCTGAATGGACCAAGCTGAA+TGG + chr4_2:19056737-19056756 None:intergenic 50.0%
TCAGCTTGGTCCATTCAGCT+TGG - chr4_2:19056738-19056757 Msa0593160:intron 50.0%
CTTCTGATCGAAGACGTGTC+CGG - chr4_2:19056828-19056847 Msa0593160:intron 50.0%
CACTGACATGTGTCGTACAC+CGG + chr4_2:19056850-19056869 None:intergenic 50.0%
CAACACTGACACATCGACAC+CGG + chr4_2:19056927-19056946 None:intergenic 50.0%
CGATGTGTCAGTGTTGTGTC+CGG - chr4_2:19056931-19056950 Msa0593160:intron 50.0%
ACTGACACATGCATGGACAC+CGG + chr4_2:19056953-19056972 None:intergenic 50.0%
! GCTTAATGATTAGGCGCTGC+TGG - chr4_2:19057308-19057327 Msa0593160:intron 50.0%
GCAGACCTGCTTGTGAAGTA+TGG - chr4_2:19057401-19057420 Msa0593160:intron 50.0%
GACCTGCTTGTGAAGTATGG+AGG - chr4_2:19057404-19057423 Msa0593160:intron 50.0%
!! TGGAGGCGTTGCTCCAAAAA+TGG - chr4_2:19057421-19057440 Msa0593160:intron 50.0%
TGCCCTGATGTGCTCAATCA+GGG + chr4_2:19057517-19057536 None:intergenic 50.0%
CTTTGTCCGTGTTTGAACCC+AGG - chr4_2:19057735-19057754 Msa0593160:intron 50.0%
GGATGTCCTGGGTTCAAACA+CGG + chr4_2:19057744-19057763 None:intergenic 50.0%
GGATAAGGAGTTGGATGTCC+TGG + chr4_2:19057756-19057775 None:intergenic 50.0%
GGATAAGGAGTTGGATGTCC+TGG + chr4_2:19057756-19057775 None:intergenic 50.0%
ACTCAATAAAGGGGGAAGGG+GGG + chr4_2:19058554-19058573 None:intergenic 50.0%
CGAAGGCAGAGACTTAAACC+CGG + chr4_2:19058683-19058702 None:intergenic 50.0%
GGTTTAAGTCTCTGCCTTCG+TGG - chr4_2:19058683-19058702 Msa0593160:CDS 50.0%
AGAAGGCTCGGAGAATTGCA+GGG - chr4_2:19059920-19059939 Msa0593160:intron 50.0%
GTGGCTAGGTAAAGCCATAG+TGG - chr4_2:19059994-19060013 Msa0593160:CDS 50.0%
GGGCCGACCAAAAATACTCA+TGG - chr4_2:19060601-19060620 Msa0593160:intron 50.0%
AAATACTCATGGCCCAAGCC+TGG - chr4_2:19060612-19060631 Msa0593160:intron 50.0%
ACAGATAACAGGCCAGGCTT+GGG + chr4_2:19060627-19060646 None:intergenic 50.0%
AACAGATAACAGGCCAGGCT+TGG + chr4_2:19060628-19060647 None:intergenic 50.0%
! GACCCACAGCGCCTTTTAAT+TGG + chr4_2:19060708-19060727 None:intergenic 50.0%
TTCCCTGAGCAGTAGAACCA+AGG - chr4_2:19061249-19061268 Msa0593160:intron 50.0%
!! TGCCTTGGTTCTACTGCTCA+GGG + chr4_2:19061254-19061273 None:intergenic 50.0%
!! ATGCCTTGGTTCTACTGCTC+AGG + chr4_2:19061255-19061274 None:intergenic 50.0%
TGGTCTATGCATGTGGGATG+AGG + chr4_2:19061284-19061303 None:intergenic 50.0%
GCCCAACCAACCATCTTTCA+TGG + chr4_2:19061304-19061323 None:intergenic 50.0%
! AAAGATGGTTGGTTGGGCCA+GGG - chr4_2:19061306-19061325 Msa0593160:intron 50.0%
AGGACGAGATCTGCCTTTCT+TGG - chr4_2:19061454-19061473 Msa0593160:intron 50.0%
GGACGAGATCTGCCTTTCTT+GGG - chr4_2:19061455-19061474 Msa0593160:intron 50.0%
GACGAGATCTGCCTTTCTTG+GGG - chr4_2:19061456-19061475 Msa0593160:intron 50.0%
ACGAGATCTGCCTTTCTTGG+GGG - chr4_2:19061457-19061476 Msa0593160:intron 50.0%
AGTGGATGTGTCTCTTGCTC+TGG + chr4_2:19061525-19061544 None:intergenic 50.0%
TCCCCAATTTGAACCCTGCA+TGG + chr4_2:19061586-19061605 None:intergenic 50.0%
CAGGGTTCAAATTGGGGAAG+TGG - chr4_2:19061588-19061607 Msa0593160:intron 50.0%
TGGTACGCTTGGCTATCTTG+AGG - chr4_2:19062051-19062070 Msa0593160:intron 50.0%
AAGTGGTGGTCCTGCTATAG+AGG - chr4_2:19062223-19062242 Msa0593160:intron 50.0%
AATCAAAAGTGGAGGGGAGG+GGG + chr4_2:19062320-19062339 None:intergenic 50.0%
CAATCAAAAGTGGAGGGGAG+GGG + chr4_2:19062321-19062340 None:intergenic 50.0%
GACCGCTGTTGTGCTTCTAT+TGG - chr4_2:19062387-19062406 Msa0593160:intron 50.0%
GGTTCCAATGAGGCAGCATA+AGG - chr4_2:19062440-19062459 Msa0593160:intron 50.0%
GGTGTGAACGAGCAATTCAG+TGG - chr4_2:19063125-19063144 Msa0593160:intron 50.0%
TGTCTGTTGCAGGTTGTCTC+TGG - chr4_2:19063267-19063286 Msa0593160:intron 50.0%
TGTTCGGGCTCAGCTTGATA+CGG - chr4_2:19063311-19063330 Msa0593160:intron 50.0%
! GAGGAGGGCATACTAGTTGA+AGG + chr4_2:19063353-19063372 None:intergenic 50.0%
ACCATTGTCGGTACAAAGCC+GGG + chr4_2:19063376-19063395 None:intergenic 50.0%
GGTGTAATGGTTGCTTGGAC+TGG - chr4_2:19063569-19063588 Msa0593160:intron 50.0%
! GGTATTGAGCACTTTCGCGT+AGG - chr4_2:19063590-19063609 Msa0593160:intron 50.0%
!! TCTTCTGGTTCTTCTGCAGG+AGG + chr4_2:19063632-19063651 None:intergenic 50.0%
AGTATGATGTACGCCCAAGG+TGG - chr4_2:19063954-19063973 Msa0593160:intron 50.0%
TCAGCATATTCTTCCCCCAG+TGG + chr4_2:19063980-19063999 None:intergenic 50.0%
CTGGGGGAAGAATATGCTGA+AGG - chr4_2:19063980-19063999 Msa0593160:intron 50.0%
! CTGCGGGTAGAGTGTTTGTG+GGG + chr4_2:19054360-19054379 None:intergenic 55.0%
! GCTGCGGGTAGAGTGTTTGT+GGG + chr4_2:19054361-19054380 None:intergenic 55.0%
TAGGGAAGCAAGAGACGCTG+CGG + chr4_2:19054377-19054396 None:intergenic 55.0%
GTGTGTCTGGTGTGTGACAC+GGG + chr4_2:19054736-19054755 None:intergenic 55.0%
GGTGTGTCTGGTGTGTGACA+CGG + chr4_2:19054737-19054756 None:intergenic 55.0%
CTCTGGTAGGAGCTTTGCTC+GGG + chr4_2:19056594-19056613 None:intergenic 55.0%
CGCCTCCATACTTCACAAGC+AGG + chr4_2:19057409-19057428 None:intergenic 55.0%
CTGCCCTGATGTGCTCAATC+AGG + chr4_2:19057518-19057537 None:intergenic 55.0%
CTTTGTCCGGGTTTGAACCC+AGG - chr4_2:19058225-19058244 Msa0593160:intron 55.0%
GGATGTCCTGGGTTCAAACC+CGG + chr4_2:19058234-19058253 None:intergenic 55.0%
TCAATAAAGGGGGAAGGGGG+GGG + chr4_2:19058552-19058571 None:intergenic 55.0%
CTCAATAAAGGGGGAAGGGG+GGG + chr4_2:19058553-19058572 None:intergenic 55.0%
CAGAAGGCTCGGAGAATTGC+AGG - chr4_2:19059919-19059938 Msa0593160:intron 55.0%
GAAGGCTCGGAGAATTGCAG+GGG - chr4_2:19059921-19059940 Msa0593160:intron 55.0%
AAGGCTCGGAGAATTGCAGG+GGG - chr4_2:19059922-19059941 Msa0593160:intron 55.0%
TGTTGGCGTCCATCACATGG+AGG - chr4_2:19059960-19059979 Msa0593160:CDS 55.0%
GAGCATGAGCCTCCATGTGA+TGG + chr4_2:19059972-19059991 None:intergenic 55.0%
CATGGAGGCTCATGCTCTAG+TGG - chr4_2:19059975-19059994 Msa0593160:CDS 55.0%
AGGCTCATGCTCTAGTGGCT+AGG - chr4_2:19059980-19059999 Msa0593160:CDS 55.0%
AAGCATGCCTCTGCATCCAC+AGG + chr4_2:19060046-19060065 None:intergenic 55.0%
GGATGAGGAACGTCATGCCT+TGG + chr4_2:19061269-19061288 None:intergenic 55.0%
! GAAAGATGGTTGGTTGGGCC+AGG - chr4_2:19061305-19061324 Msa0593160:intron 55.0%
! AAGATGGTTGGTTGGGCCAG+GGG - chr4_2:19061307-19061326 Msa0593160:intron 55.0%
ATCTAATCCTTGGGCACCCC+TGG + chr4_2:19061326-19061345 None:intergenic 55.0%
CGAGATCTGCCTTTCTTGGG+GGG - chr4_2:19061458-19061477 Msa0593160:intron 55.0%
GAGATCTGCCTTTCTTGGGG+GGG - chr4_2:19061459-19061478 Msa0593160:intron 55.0%
! TAGAAGCACAACAGCGGTCG+TGG + chr4_2:19062386-19062405 None:intergenic 55.0%
CTGTTGCAGGTTGTCTCTGG+TGG - chr4_2:19063270-19063289 Msa0593160:intron 55.0%
AACTAGTATGCCCTCCTCCC+CGG - chr4_2:19063355-19063374 Msa0593160:intron 55.0%
CCATTGTCGGTACAAAGCCG+GGG + chr4_2:19063375-19063394 None:intergenic 55.0%
!! TCTGGTTCTTCTGCAGGAGG+TGG + chr4_2:19063629-19063648 None:intergenic 55.0%
! TCGGGTTTAGCGGGGTTTTC+TGG + chr4_2:19064164-19064183 None:intergenic 55.0%
! CGCTGCGGGTAGAGTGTTTG+TGG + chr4_2:19054362-19054381 None:intergenic 60.0%
AGGGAAGCAAGAGACGCTGC+GGG + chr4_2:19054376-19054395 None:intergenic 60.0%
AATAAAGGGGGAAGGGGGGG+GGG + chr4_2:19058550-19058569 None:intergenic 60.0%
CAATAAAGGGGGAAGGGGGG+GGG + chr4_2:19058551-19058570 None:intergenic 60.0%
CAATGCAGTCGGGGTGCAGA+AGG - chr4_2:19059903-19059922 Msa0593160:intron 60.0%
CATGGTTGCCCCCCCAAGAA+AGG + chr4_2:19061470-19061489 None:intergenic 60.0%
GGGAGGGCAACACAGGAAGA+AGG + chr4_2:19061869-19061888 None:intergenic 60.0%
! ACAGCGGTCGTGGTAGTGTG+AGG + chr4_2:19062376-19062395 None:intergenic 60.0%
TTGTCGGTACAAAGCCGGGG+AGG + chr4_2:19063372-19063391 None:intergenic 60.0%
! CCCCGGCTTTGTACCGACAA+TGG - chr4_2:19063372-19063391 Msa0593160:intron 60.0%
GGTTCTTCTGCAGGAGGTGG+AGG + chr4_2:19063626-19063645 None:intergenic 60.0%
GGGGGCTTGGGTAGCTCAAC+TGG + chr4_2:19057791-19057810 None:intergenic 65.0%
GGGGGCTTGGGTAGCTCAAC+TGG + chr4_2:19057791-19057810 None:intergenic 65.0%
ATAAAGGGGGAAGGGGGGGG+GGG + chr4_2:19058549-19058568 None:intergenic 65.0%
CAGTCGGGGTGCAGAAGGCT+CGG - chr4_2:19059908-19059927 Msa0593160:intron 65.0%
CAAAAGTGGAGGGGAGGGGG+TGG + chr4_2:19062317-19062336 None:intergenic 65.0%
CGGTACAAAGCCGGGGAGGA+GGG + chr4_2:19063368-19063387 None:intergenic 65.0%
TCGGTACAAAGCCGGGGAGG+AGG + chr4_2:19063369-19063388 None:intergenic 65.0%
TGTACGCCCAAGGTGGCCAC+TGG - chr4_2:19063961-19063980 Msa0593160:intron 65.0%
GTACGCCCAAGGTGGCCACT+GGG - chr4_2:19063962-19063981 Msa0593160:intron 65.0%
TACGCCCAAGGTGGCCACTG+GGG - chr4_2:19063963-19063982 Msa0593160:intron 65.0%
CTTCCCCCAGTGGCCACCTT+GGG + chr4_2:19063970-19063989 None:intergenic 65.0%
TCTTCCCCCAGTGGCCACCT+TGG + chr4_2:19063971-19063990 None:intergenic 65.0%
AGTGGAGGGGAGGGGGTGGA+GGG + chr4_2:19062313-19062332 None:intergenic 70.0%
AAGTGGAGGGGAGGGGGTGG+AGG + chr4_2:19062314-19062333 None:intergenic 70.0%
ACGCCCAAGGTGGCCACTGG+GGG - chr4_2:19063964-19063983 Msa0593160:intron 70.0%
!! GGTTGGGCCAGGGGTGCCCA+AGG - chr4_2:19061316-19061335 Msa0593160:intron 75.0%
GTGGAGGGGAGGGGGTGGAG+GGG + chr4_2:19062312-19062331 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 19054168 19064473 19054168 ID=Msa0593160;Name=Msa0593160
chr4_2 mRNA 19054168 19064473 19054168 ID=Msa0593160-mRNA-1;Parent=Msa0593160;Name=Msa0593160-mRNA-1;_AED=0.16;_eAED=0.16;_QI=90|0.75|0.84|0.92|1|1|13|389|463
chr4_2 exon 19054168 19054685 19054168 ID=Msa0593160-mRNA-1:exon:5515;Parent=Msa0593160-mRNA-1
chr4_2 exon 19054983 19055071 19054983 ID=Msa0593160-mRNA-1:exon:5514;Parent=Msa0593160-mRNA-1
chr4_2 exon 19055248 19055362 19055248 ID=Msa0593160-mRNA-1:exon:5513;Parent=Msa0593160-mRNA-1
chr4_2 exon 19055461 19055544 19055461 ID=Msa0593160-mRNA-1:exon:5512;Parent=Msa0593160-mRNA-1
chr4_2 exon 19055684 19055759 19055684 ID=Msa0593160-mRNA-1:exon:5511;Parent=Msa0593160-mRNA-1
chr4_2 exon 19056115 19056200 19056115 ID=Msa0593160-mRNA-1:exon:5510;Parent=Msa0593160-mRNA-1
chr4_2 exon 19056355 19056545 19056355 ID=Msa0593160-mRNA-1:exon:5509;Parent=Msa0593160-mRNA-1
chr4_2 exon 19057271 19057314 19057271 ID=Msa0593160-mRNA-1:exon:5508;Parent=Msa0593160-mRNA-1
chr4_2 exon 19058640 19058784 19058640 ID=Msa0593160-mRNA-1:exon:5507;Parent=Msa0593160-mRNA-1
chr4_2 exon 19059937 19060033 19059937 ID=Msa0593160-mRNA-1:exon:5506;Parent=Msa0593160-mRNA-1
chr4_2 exon 19061166 19061240 19061166 ID=Msa0593160-mRNA-1:exon:5505;Parent=Msa0593160-mRNA-1
chr4_2 exon 19064036 19064080 19064036 ID=Msa0593160-mRNA-1:exon:5504;Parent=Msa0593160-mRNA-1
chr4_2 exon 19064168 19064473 19064168 ID=Msa0593160-mRNA-1:exon:5503;Parent=Msa0593160-mRNA-1
chr4_2 five_prime_UTR 19064384 19064473 19064384 ID=Msa0593160-mRNA-1:five_prime_utr;Parent=Msa0593160-mRNA-1
chr4_2 CDS 19064168 19064383 19064168 ID=Msa0593160-mRNA-1:cds;Parent=Msa0593160-mRNA-1
chr4_2 CDS 19064036 19064080 19064036 ID=Msa0593160-mRNA-1:cds;Parent=Msa0593160-mRNA-1
chr4_2 CDS 19061166 19061240 19061166 ID=Msa0593160-mRNA-1:cds;Parent=Msa0593160-mRNA-1
chr4_2 CDS 19059937 19060033 19059937 ID=Msa0593160-mRNA-1:cds;Parent=Msa0593160-mRNA-1
chr4_2 CDS 19058640 19058784 19058640 ID=Msa0593160-mRNA-1:cds;Parent=Msa0593160-mRNA-1
chr4_2 CDS 19057271 19057314 19057271 ID=Msa0593160-mRNA-1:cds;Parent=Msa0593160-mRNA-1
chr4_2 CDS 19056355 19056545 19056355 ID=Msa0593160-mRNA-1:cds;Parent=Msa0593160-mRNA-1
chr4_2 CDS 19056115 19056200 19056115 ID=Msa0593160-mRNA-1:cds;Parent=Msa0593160-mRNA-1
chr4_2 CDS 19055684 19055759 19055684 ID=Msa0593160-mRNA-1:cds;Parent=Msa0593160-mRNA-1
chr4_2 CDS 19055461 19055544 19055461 ID=Msa0593160-mRNA-1:cds;Parent=Msa0593160-mRNA-1
chr4_2 CDS 19055248 19055362 19055248 ID=Msa0593160-mRNA-1:cds;Parent=Msa0593160-mRNA-1
chr4_2 CDS 19054983 19055071 19054983 ID=Msa0593160-mRNA-1:cds;Parent=Msa0593160-mRNA-1
chr4_2 CDS 19054557 19054685 19054557 ID=Msa0593160-mRNA-1:cds;Parent=Msa0593160-mRNA-1
chr4_2 three_prime_UTR 19054168 19054556 19054168 ID=Msa0593160-mRNA-1:three_prime_utr;Parent=Msa0593160-mRNA-1
Gene Sequence

>Msa0593160

ATGTTACTTTTTCTCTCTACAATGGCGATTTCAACAATTTCCCGCGTAAATTTCATTCCCAAACCTTCACTCTTCACATCTCTCCGCCGAATTCATCTTCCCCACAAACACTCTACCCGCAGCGTCTCTTGCTTCCCTAACCGAACTCCAAAACGCGATGGAGATATTGTCGTTTTGGGCATCGAAACTAGCTGCGACGACACTGCTGCCGCTATCGTGAGAAGTGACGGTGAAATTTTGAGCCAAGTGATATCTTCTCAGGCAGACCTGCTTGTGAAGTATGGAGGCGTTGCTCCAAAAATGGCAGAAGAAGCTCACTCACAAGTGATAGATCAGGTTGTGCAAGATGCCCTTGATAAAGCTTATATGACTGAGAAGGATCTTACTGCGGTTGCTGTTACTATTGGTCCGGGTTTAAGTCTCTGCCTTCGTGAGGAACTCTTGTCATCAATTACATATCCATCTGTCCATGTCTTGTACAATGCAGTCGGGGTGCAGAAGGCTCGGAGAATTGCAGGGGGCTTTAATTTACCAATTGTTGGCGTCCATCACATGGAGGCTCATGCTCTAGTGGCTAGGGGTGCCCAAGGATTAGATGTCGACGTAATGGACTCAATTGCAGGGGGACACAATCTACTCATTCTTGCACGTGATCTTGGGCAATACATACAACTTGGAACTACAATAGATGATGCTATTGGCGAGGCTTATGACAAGTCAGCAAAATGGCTTGGACTTGATATAAGGAGAAGTGGTGGTCCTGCTATAGAGGAGCTTGCTAAGGAGGGCAATGCTAAATCAATCAGTTTTTCTGTTCCAATGAGGCAGCATAAGGATTGCAACTTCTCTTATGCTGGTCTAAAAACCCAAGTAAGACTGGCAATTGAGTCCAAAAAGATTGATGCCAAAATTCCTATTTCTTCGGCAAGTAATGAAGATCGATTGTCACGAGCTGATATTGCCGCTTCTTTTCAGCGAATTGCAGTATTACATCTTGAGGAAAGGTGTGAACGAGCAATTCAGTGGGCATTGAAGATGGAGCCTTCTATAAGACATCTGGTTGTCTCTGGTGGTGTTGCGTCAAATCAATATGTTCGGGCTCAGCTTGATACGGTTGTGAAGAAGAATGGCCTTCAACTAGTATGCCCTCCTCCCCGGCTTTGTACCGACAATGGTGTAATGGTTGCTTGGACTGGTATTGAGCACTTTCGCGTAGGAAGATATGATCCTCCACCTCCTGCAGAAGAACCAGAAGACTTTCTGTATGATGTACGCCCAAGGTGGCCACTGGGGGAAGAATATGCTGAAGGAAGTAATTTCAGTCGCTCCTTAAGAACGGCACGAATTCATCCTTCTCTTACATCTCTAATTCAAGCATCAATGCAACAGTGA

Protein sequence

>Msa0593160

MLLFLSTMAISTISRVNFIPKPSLFTSLRRIHLPHKHSTRSVSCFPNRTPKRDGDIVVLGIETSCDDTAAAIVRSDGEILSQVISSQADLLVKYGGVAPKMAEEAHSQVIDQVVQDALDKAYMTEKDLTAVAVTIGPGLSLCLREELLSSITYPSVHVLYNAVGVQKARRIAGGFNLPIVGVHHMEAHALVARGAQGLDVDVMDSIAGGHNLLILARDLGQYIQLGTTIDDAIGEAYDKSAKWLGLDIRRSGGPAIEELAKEGNAKSISFSVPMRQHKDCNFSYAGLKTQVRLAIESKKIDAKIPISSASNEDRLSRADIAASFQRIAVLHLEERCERAIQWALKMEPSIRHLVVSGGVASNQYVRAQLDTVVKKNGLQLVCPPPRLCTDNGVMVAWTGIEHFRVGRYDPPPPAEEPEDFLYDVRPRWPLGEEYAEGSNFSRSLRTARIHPSLTSLIQASMQQ*