Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0647380 | XP_003607297.1 | 97.059 | 68 | 2 | 0 | 1 | 68 | 1 | 68 | 1.49e-40 | 137 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0647380 | G7JPM7 | 97.059 | 68 | 2 | 0 | 1 | 68 | 1 | 68 | 7.14e-41 | 137 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001950 | Msa0647380 | 0.819468 | 1.143399e-52 | -8.615850e-47 |
| Msa0004360 | Msa0647380 | 0.808078 | 3.696144e-50 | -8.615850e-47 |
| Msa0005050 | Msa0647380 | 0.813128 | 2.993899e-51 | -8.615850e-47 |
| Msa0016670 | Msa0647380 | 0.810732 | 9.960016e-51 | -8.615850e-47 |
| Msa0024680 | Msa0647380 | 0.825786 | 3.876339e-54 | -8.615850e-47 |
| Msa0027540 | Msa0647380 | 0.800268 | 1.561025e-48 | -8.615850e-47 |
| Msa0030310 | Msa0647380 | 0.846081 | 2.717542e-59 | -8.615850e-47 |
| Msa0030380 | Msa0647380 | 0.818745 | 1.670058e-52 | -8.615850e-47 |
| Msa0032120 | Msa0647380 | 0.800504 | 1.397455e-48 | -8.615850e-47 |
| Msa0032840 | Msa0647380 | -0.841731 | 3.977200e-58 | -8.615850e-47 |
| Msa0048020 | Msa0647380 | 0.802208 | 6.255526e-49 | -8.615850e-47 |
| Msa0050430 | Msa0647380 | 0.809140 | 2.191980e-50 | -8.615850e-47 |
| Msa0053110 | Msa0647380 | 0.826868 | 2.141433e-54 | -8.615850e-47 |
| Msa0072810 | Msa0647380 | 0.832110 | 1.139443e-55 | -8.615850e-47 |
| Msa0073670 | Msa0647380 | 0.805690 | 1.181930e-49 | -8.615850e-47 |
| Msa0094950 | Msa0647380 | 0.804217 | 2.402003e-49 | -8.615850e-47 |
| Msa0095380 | Msa0647380 | 0.836692 | 8.061700e-57 | -8.615850e-47 |
| Msa0098440 | Msa0647380 | 0.813692 | 2.250696e-51 | -8.615850e-47 |
| Msa0103000 | Msa0647380 | 0.830233 | 3.294937e-55 | -8.615850e-47 |
| Msa0104290 | Msa0647380 | 0.802780 | 4.768516e-49 | -8.615850e-47 |
| Msa0113160 | Msa0647380 | 0.840893 | 6.607471e-58 | -8.615850e-47 |
| Msa0114540 | Msa0647380 | -0.817175 | 3.778525e-52 | -8.615850e-47 |
| Msa0120330 | Msa0647380 | 0.811186 | 7.941761e-51 | -8.615850e-47 |
| Msa0607200 | Msa0647380 | 0.876380 | 1.462396e-68 | -8.615850e-47 |
| Msa0609450 | Msa0647380 | 0.816030 | 6.821726e-52 | -8.615850e-47 |
| Msa0618010 | Msa0647380 | 0.834462 | 2.955703e-56 | -8.615850e-47 |
| Msa0619980 | Msa0647380 | 0.828862 | 7.100272e-55 | -8.615850e-47 |
| Msa0620810 | Msa0647380 | 0.801870 | 7.340856e-49 | -8.615850e-47 |
| Msa0620990 | Msa0647380 | 0.800103 | 1.685924e-48 | -8.615850e-47 |
| Msa0623700 | Msa0647380 | 0.810649 | 1.038043e-50 | -8.615850e-47 |
| Msa0625280 | Msa0647380 | 0.800935 | 1.141390e-48 | -8.615850e-47 |
| Msa0627910 | Msa0647380 | 0.800088 | 1.698167e-48 | -8.615850e-47 |
| Msa0639120 | Msa0647380 | 0.800934 | 1.141423e-48 | -8.615850e-47 |
| Msa0642650 | Msa0647380 | 0.836981 | 6.804337e-57 | -8.615850e-47 |
| Msa0647380 | Msa0650090 | 0.825084 | 5.684728e-54 | -8.615850e-47 |
| Msa0647380 | Msa0654540 | 0.808729 | 2.683560e-50 | -8.615850e-47 |
| Msa0647380 | Msa0669850 | 0.841451 | 4.715289e-58 | -8.615850e-47 |
| Msa0647380 | Msa0670270 | 0.807774 | 4.288285e-50 | -8.615850e-47 |
| Msa0647380 | Msa0677290 | 0.801195 | 1.009906e-48 | -8.615850e-47 |
| Msa0647380 | Msa0678860 | 0.835015 | 2.145550e-56 | -8.615850e-47 |
| Msa0647380 | Msa0680240 | 0.811930 | 5.471547e-51 | -8.615850e-47 |
| Msa0647380 | Msa0681890 | 0.812015 | 5.244539e-51 | -8.615850e-47 |
| Msa0647380 | Msa0690250 | 0.839771 | 1.297796e-57 | -8.615850e-47 |
| Msa0647380 | Msa0690560 | 0.815887 | 7.343448e-52 | -8.615850e-47 |
| Msa0647380 | Msa0692080 | 0.828287 | 9.775275e-55 | -8.615850e-47 |
| Msa0647380 | Msa0696620 | 0.801277 | 9.713160e-49 | -8.615850e-47 |
| Msa0647380 | Msa0703230 | 0.809478 | 1.855432e-50 | -8.615850e-47 |
| Msa0647380 | Msa0711490 | 0.802573 | 5.260687e-49 | -8.615850e-47 |
| Msa0647380 | Msa0712310 | 0.829796 | 4.213349e-55 | -8.615850e-47 |
| Msa0647380 | Msa0712980 | 0.818578 | 1.822396e-52 | -8.615850e-47 |
| Msa0647380 | Msa0715010 | -0.806289 | 8.842988e-50 | -8.615850e-47 |
| Msa0647380 | Msa0725920 | 0.800917 | 1.150770e-48 | -8.615850e-47 |
| Msa0647380 | Msa0734660 | 0.834852 | 2.358325e-56 | -8.615850e-47 |
| Msa0647380 | Msa0747780 | 0.820616 | 6.242783e-53 | -8.615850e-47 |
| Msa0647380 | Msa0752620 | 0.809738 | 1.631509e-50 | -8.615850e-47 |
| Msa0647380 | Msa0755340 | 0.846610 | 1.949798e-59 | -8.615850e-47 |
| Msa0647380 | Msa0757870 | 0.801512 | 8.694297e-49 | -8.615850e-47 |
| Msa0647380 | Msa0776220 | 0.847689 | 9.865232e-60 | -8.615850e-47 |
| Msa0647380 | Msa0787750 | 0.805336 | 1.402307e-49 | -8.615850e-47 |
| Msa0647380 | Msa0793720 | 0.810811 | 9.573083e-51 | -8.615850e-47 |
| Msa0647380 | Msa0795010 | 0.801284 | 9.679931e-49 | -8.615850e-47 |
| Msa0647380 | Msa0795030 | 0.815207 | 1.040480e-51 | -8.615850e-47 |
| Msa0647380 | Msa0797120 | 0.802028 | 6.812893e-49 | -8.615850e-47 |
| Msa0647380 | Msa0798000 | -0.803908 | 2.784197e-49 | -8.615850e-47 |
| Msa0647380 | Msa0813670 | 0.816307 | 5.917130e-52 | -8.615850e-47 |
| Msa0647380 | Msa0813720 | 0.848294 | 6.717824e-60 | -8.615850e-47 |
| Msa0647380 | Msa0813740 | 0.809451 | 1.879961e-50 | -8.615850e-47 |
| Msa0647380 | Msa0825310 | 0.804920 | 1.713150e-49 | -8.615850e-47 |
| Msa0647380 | Msa0830990 | 0.827492 | 1.518870e-54 | -8.615850e-47 |
| Msa0647380 | Msa0846030 | 0.810722 | 1.000687e-50 | -8.615850e-47 |
| Msa0647380 | Msa0852730 | 0.809244 | 2.082319e-50 | -8.615850e-47 |
| Msa0647380 | Msa0854120 | 0.818157 | 2.269518e-52 | -8.615850e-47 |
| Msa0647380 | Msa0863240 | 0.811819 | 5.786461e-51 | -8.615850e-47 |
| Msa0647380 | Msa0866120 | 0.805452 | 1.326091e-49 | -8.615850e-47 |
| Msa0647380 | Msa0871890 | 0.807356 | 5.260456e-50 | -8.615850e-47 |
| Msa0647380 | Msa0872310 | 0.829229 | 5.786117e-55 | -8.615850e-47 |
| Msa0647380 | Msa0874500 | 0.804688 | 1.915624e-49 | -8.615850e-47 |
| Msa0647380 | Msa0883030 | 0.831290 | 1.815236e-55 | -8.615850e-47 |
| Msa0647380 | Msa0890250 | 0.823855 | 1.106306e-53 | -8.615850e-47 |
| Msa0647380 | Msa0900630 | 0.821544 | 3.816469e-53 | -8.615850e-47 |
| Msa0647380 | Msa0903330 | 0.811199 | 7.891005e-51 | -8.615850e-47 |
| Msa0647380 | Msa0905550 | 0.802381 | 5.763686e-49 | -8.615850e-47 |
| Msa0647380 | Msa0910400 | 0.800834 | 1.196695e-48 | -8.615850e-47 |
| Msa0647380 | Msa0922540 | 0.813045 | 3.122050e-51 | -8.615850e-47 |
| Msa0647380 | Msa0925160 | 0.823647 | 1.237608e-53 | -8.615850e-47 |
| Msa0647380 | Msa0931610 | 0.808366 | 3.208741e-50 | -8.615850e-47 |
| Msa0647380 | Msa0937550 | 0.844451 | 7.498830e-59 | -8.615850e-47 |
| Msa0647380 | Msa0937670 | 0.810914 | 9.094458e-51 | -8.615850e-47 |
| Msa0647380 | Msa0941730 | 0.804371 | 2.230304e-49 | -8.615850e-47 |
| Msa0647380 | Msa0946320 | 0.819674 | 1.025865e-52 | -8.615850e-47 |
| Msa0647380 | Msa0955260 | 0.807085 | 6.004596e-50 | -8.615850e-47 |
| Msa0647380 | Msa0958020 | 0.812102 | 5.020305e-51 | -8.615850e-47 |
| Msa0647380 | Msa0974750 | 0.802192 | 6.305293e-49 | -8.615850e-47 |
| Msa0647380 | Msa0990520 | 0.813730 | 2.207469e-51 | -8.615850e-47 |
| Msa0647380 | Msa1000690 | 0.801017 | 1.097934e-48 | -8.615850e-47 |
| Msa0647380 | Msa1000940 | 0.803115 | 4.065724e-49 | -8.615850e-47 |
| Msa0647380 | Msa1004500 | 0.813918 | 2.006409e-51 | -8.615850e-47 |
| Msa0647380 | Msa1007350 | 0.801120 | 1.046164e-48 | -8.615850e-47 |
| Msa0647380 | Msa1012700 | 0.804065 | 2.582854e-49 | -8.615850e-47 |
| Msa0647380 | Msa1012810 | 0.824405 | 8.216935e-54 | -8.615850e-47 |
| Msa0647380 | Msa1018790 | 0.853702 | 2.005990e-61 | -8.615850e-47 |
| Msa0647380 | Msa1044340 | 0.830828 | 2.357383e-55 | -8.615850e-47 |
| Msa0647380 | Msa1045880 | 0.812855 | 3.436009e-51 | -8.615850e-47 |
| Msa0647380 | Msa1045970 | 0.814256 | 1.689788e-51 | -8.615850e-47 |
| Msa0647380 | Msa1046870 | 0.810481 | 1.128337e-50 | -8.615850e-47 |
| Msa0647380 | Msa1048330 | 0.822704 | 2.054526e-53 | -8.615850e-47 |
| Msa0647380 | Msa1054240 | 0.835760 | 1.391012e-56 | -8.615850e-47 |
| Msa0647380 | Msa1054720 | 0.821696 | 3.518791e-53 | -8.615850e-47 |
| Msa0647380 | Msa1058010 | 0.803357 | 3.624130e-49 | -8.615850e-47 |
| Msa0647380 | Msa1061500 | 0.812055 | 5.138487e-51 | -8.615850e-47 |
| Msa0647380 | Msa1082700 | 0.846910 | 1.614373e-59 | -8.615850e-47 |
| Msa0647380 | Msa1087810 | 0.802967 | 4.363305e-49 | -8.615850e-47 |
| Msa0647380 | Msa1094420 | 0.831149 | 1.965607e-55 | -8.615850e-47 |
| Msa0647380 | Msa1100490 | 0.802624 | 5.135318e-49 | -8.615850e-47 |
| Msa0647380 | Msa1106810 | 0.811672 | 6.226936e-51 | -8.615850e-47 |
| Msa0647380 | Msa1107440 | 0.814262 | 1.685252e-51 | -8.615850e-47 |
| Msa0647380 | Msa1126510 | 0.803340 | 3.652518e-49 | -8.615850e-47 |
| Msa0647380 | Msa1126770 | 0.808952 | 2.405292e-50 | -8.615850e-47 |
| Msa0647380 | Msa1135690 | 0.827261 | 1.725263e-54 | -8.615850e-47 |
| Msa0647380 | Msa1139810 | 0.807040 | 6.136817e-50 | -8.615850e-47 |
| Msa0647380 | Msa1150970 | 0.810830 | 9.484090e-51 | -8.615850e-47 |
| Msa0647380 | Msa1159100 | 0.803031 | 4.231928e-49 | -8.615850e-47 |
| Msa0647380 | Msa1166010 | 0.828896 | 6.965413e-55 | -8.615850e-47 |
| Msa0647380 | Msa1166400 | 0.800164 | 1.638707e-48 | -8.615850e-47 |
| Msa0647380 | Msa1166860 | 0.804807 | 1.809076e-49 | -8.615850e-47 |
| Msa0647380 | Msa1171690 | 0.818483 | 1.914345e-52 | -8.615850e-47 |
| Msa0647380 | Msa1174010 | 0.814331 | 1.627145e-51 | -8.615850e-47 |
| Msa0647380 | Msa1193950 | -0.805734 | 1.156767e-49 | -8.615850e-47 |
| Msa0647380 | Msa1223840 | 0.824541 | 7.635306e-54 | -8.615850e-47 |
| Msa0647380 | Msa1224670 | 0.836648 | 8.271254e-57 | -8.615850e-47 |
| Msa0647380 | Msa1226620 | 0.823762 | 1.163049e-53 | -8.615850e-47 |
| Msa0647380 | Msa1229700 | 0.803526 | 3.341961e-49 | -8.615850e-47 |
| Msa0647380 | Msa1237030 | 0.839750 | 1.314828e-57 | -8.615850e-47 |
| Msa0647380 | Msa1249870 | 0.836856 | 7.321593e-57 | -8.615850e-47 |
| Msa0647380 | Msa1269580 | -0.808095 | 3.665499e-50 | -8.615850e-47 |
| Msa0647380 | Msa1272330 | 0.815002 | 1.155376e-51 | -8.615850e-47 |
| Msa0647380 | Msa1284520 | 0.807739 | 4.363345e-50 | -8.615850e-47 |
| Msa0647380 | Msa1335940 | 0.822394 | 2.425797e-53 | -8.615850e-47 |
| Msa0647380 | Msa1337090 | 0.818155 | 2.271901e-52 | -8.615850e-47 |
| Msa0647380 | Msa1365150 | 0.811853 | 5.687936e-51 | -8.615850e-47 |
| Msa0647380 | Msa1365200 | 0.806614 | 7.551850e-50 | -8.615850e-47 |
| Msa0647380 | Msa1365870 | 0.810216 | 1.286770e-50 | -8.615850e-47 |
| Msa0647380 | Msa1367880 | 0.800135 | 1.661477e-48 | -8.615850e-47 |
| Msa0647380 | Msa1373510 | 0.847382 | 1.197721e-59 | -8.615850e-47 |
| Msa0647380 | Msa1374440 | 0.837184 | 6.035750e-57 | -8.615850e-47 |
| Msa0647380 | Msa1375940 | 0.814739 | 1.321795e-51 | -8.615850e-47 |
| Msa0647380 | Msa1379990 | 0.848342 | 6.514531e-60 | -8.615850e-47 |
| Msa0647380 | Msa1382310 | 0.829673 | 4.514062e-55 | -8.615850e-47 |
| Msa0647380 | Msa1382410 | 0.815507 | 8.924771e-52 | -8.615850e-47 |
| Msa0647380 | Msa1390310 | 0.829838 | 4.114420e-55 | -8.615850e-47 |
| Msa0647380 | Msa1391590 | 0.813746 | 2.189790e-51 | -8.615850e-47 |
| Msa0647380 | Msa1397050 | 0.808774 | 2.625727e-50 | -8.615850e-47 |
| Msa0647380 | Msa1397810 | 0.807423 | 5.092973e-50 | -8.615850e-47 |
| Msa0647380 | Msa1398480 | 0.809203 | 2.125120e-50 | -8.615850e-47 |
| Msa0647380 | Msa1404190 | 0.808677 | 2.753124e-50 | -8.615850e-47 |
| Msa0647380 | Msa1406040 | 0.817093 | 3.941865e-52 | -8.615850e-47 |
| Msa0647380 | Msa1420060 | 0.811331 | 7.383871e-51 | -8.615850e-47 |
| Msa0647380 | Msa1422270 | 0.831314 | 1.790828e-55 | -8.615850e-47 |
| Msa0647380 | Msa1429360 | -0.810611 | 1.057515e-50 | -8.615850e-47 |
| Msa0647380 | Msa1442850 | 0.803823 | 2.899876e-49 | -8.615850e-47 |
| Msa0647380 | Msa1447230 | 0.800406 | 1.462757e-48 | -8.615850e-47 |
| Msa0647380 | Msa1448690 | 0.805419 | 1.347445e-49 | -8.615850e-47 |
| Msa0647380 | Msa1449880 | 0.805054 | 1.606511e-49 | -8.615850e-47 |
| Msa0647380 | Msa1453620 | 0.818748 | 1.667494e-52 | -8.615850e-47 |
| Msa0647380 | Msa1461490 | 0.818052 | 2.397058e-52 | -8.615850e-47 |
| Msa0647380 | Msa1464730 | 0.809740 | 1.629638e-50 | -8.615850e-47 |
| Msa0647380 | Msa1466990 | 0.804313 | 2.293693e-49 | -8.615850e-47 |
| Msa0135980 | Msa0647380 | 0.806513 | 7.931856e-50 | -8.615850e-47 |
| Msa0139900 | Msa0647380 | 0.821074 | 4.898852e-53 | -8.615850e-47 |
| Msa0141830 | Msa0647380 | 0.816078 | 6.657145e-52 | -8.615850e-47 |
| Msa0143080 | Msa0647380 | 0.820394 | 7.022035e-53 | -8.615850e-47 |
| Msa0143430 | Msa0647380 | 0.807360 | 5.251252e-50 | -8.615850e-47 |
| Msa0145950 | Msa0647380 | 0.813767 | 2.167114e-51 | -8.615850e-47 |
| Msa0147560 | Msa0647380 | 0.817603 | 3.027113e-52 | -8.615850e-47 |
| Msa0168100 | Msa0647380 | 0.809543 | 1.796486e-50 | -8.615850e-47 |
| Msa0169570 | Msa0647380 | 0.803109 | 4.078886e-49 | -8.615850e-47 |
| Msa0169620 | Msa0647380 | 0.802755 | 4.825938e-49 | -8.615850e-47 |
| Msa0172350 | Msa0647380 | 0.820343 | 7.213467e-53 | -8.615850e-47 |
| Msa0172960 | Msa0647380 | -0.825565 | 4.373686e-54 | -8.615850e-47 |
| Msa0173740 | Msa0647380 | 0.820840 | 5.546564e-53 | -8.615850e-47 |
| Msa0173820 | Msa0647380 | 0.826450 | 2.695158e-54 | -8.615850e-47 |
| Msa0173830 | Msa0647380 | 0.820449 | 6.819545e-53 | -8.615850e-47 |
| Msa0183610 | Msa0647380 | 0.801663 | 8.098110e-49 | -8.615850e-47 |
| Msa0183620 | Msa0647380 | 0.833241 | 5.970192e-56 | -8.615850e-47 |
| Msa0183830 | Msa0647380 | 0.803053 | 4.189154e-49 | -8.615850e-47 |
| Msa0186890 | Msa0647380 | 0.808418 | 3.127864e-50 | -8.615850e-47 |
| Msa0187930 | Msa0647380 | 0.810409 | 1.169614e-50 | -8.615850e-47 |
| Msa0193120 | Msa0647380 | 0.803896 | 2.800794e-49 | -8.615850e-47 |
| Msa0194540 | Msa0647380 | 0.816633 | 5.001625e-52 | -8.615850e-47 |
| Msa0194970 | Msa0647380 | 0.828334 | 9.526774e-55 | -8.615850e-47 |
| Msa0200950 | Msa0647380 | -0.801002 | 1.105477e-48 | -8.615850e-47 |
| Msa0200970 | Msa0647380 | 0.808658 | 2.778918e-50 | -8.615850e-47 |
| Msa0207000 | Msa0647380 | 0.812260 | 4.637522e-51 | -8.615850e-47 |
| Msa0208630 | Msa0647380 | 0.800901 | 1.159754e-48 | -8.615850e-47 |
| Msa0219190 | Msa0647380 | 0.807460 | 5.000675e-50 | -8.615850e-47 |
| Msa0224730 | Msa0647380 | 0.829414 | 5.218069e-55 | -8.615850e-47 |
| Msa0230550 | Msa0647380 | -0.837757 | 4.305388e-57 | -8.615850e-47 |
| Msa0236980 | Msa0647380 | 0.828098 | 1.085870e-54 | -8.615850e-47 |
| Msa0369570 | Msa0647380 | 0.806078 | 9.794157e-50 | -8.615850e-47 |
| Msa0376510 | Msa0647380 | 0.828064 | 1.106334e-54 | -8.615850e-47 |
| Msa0378080 | Msa0647380 | 0.827675 | 1.372527e-54 | -8.615850e-47 |
| Msa0380040 | Msa0647380 | 0.806950 | 6.411538e-50 | -8.615850e-47 |
| Msa0392070 | Msa0647380 | 0.829883 | 4.011089e-55 | -8.615850e-47 |
| Msa0392940 | Msa0647380 | 0.814915 | 1.208118e-51 | -8.615850e-47 |
| Msa0398640 | Msa0647380 | 0.800070 | 1.712500e-48 | -8.615850e-47 |
| Msa0402330 | Msa0647380 | 0.830031 | 3.691277e-55 | -8.615850e-47 |
| Msa0414950 | Msa0647380 | -0.806768 | 7.007857e-50 | -8.615850e-47 |
| Msa0419820 | Msa0647380 | 0.802472 | 5.521316e-49 | -8.615850e-47 |
| Msa0420000 | Msa0647380 | 0.802072 | 6.671875e-49 | -8.615850e-47 |
| Msa0425050 | Msa0647380 | 0.823638 | 1.243361e-53 | -8.615850e-47 |
| Msa0425940 | Msa0647380 | 0.817245 | 3.645237e-52 | -8.615850e-47 |
| Msa0426160 | Msa0647380 | 0.808978 | 2.374961e-50 | -8.615850e-47 |
| Msa0429210 | Msa0647380 | 0.813595 | 2.364074e-51 | -8.615850e-47 |
| Msa0429290 | Msa0647380 | 0.819500 | 1.124340e-52 | -8.615850e-47 |
| Msa0436280 | Msa0647380 | -0.813721 | 2.217517e-51 | -8.615850e-47 |
| Msa0436460 | Msa0647380 | 0.842659 | 2.258552e-58 | -8.615850e-47 |
| Msa0436500 | Msa0647380 | 0.821143 | 4.721180e-53 | -8.615850e-47 |
| Msa0441800 | Msa0647380 | 0.804980 | 1.664563e-49 | -8.615850e-47 |
| Msa0468160 | Msa0647380 | 0.809721 | 1.644659e-50 | -8.615850e-47 |
| Msa0469910 | Msa0647380 | -0.829275 | 5.638216e-55 | -8.615850e-47 |
| Msa0469970 | Msa0647380 | 0.802968 | 4.360614e-49 | -8.615850e-47 |
| Msa0470180 | Msa0647380 | 0.809379 | 1.948204e-50 | -8.615850e-47 |
| Msa0475580 | Msa0647380 | 0.818582 | 1.817984e-52 | -8.615850e-47 |
| Msa0480320 | Msa0647380 | 0.820065 | 8.350881e-53 | -8.615850e-47 |
| Msa0239660 | Msa0647380 | 0.802807 | 4.707947e-49 | -8.615850e-47 |
| Msa0241800 | Msa0647380 | 0.813707 | 2.233668e-51 | -8.615850e-47 |
| Msa0242230 | Msa0647380 | 0.803647 | 3.154550e-49 | -8.615850e-47 |
| Msa0242680 | Msa0647380 | 0.824589 | 7.437939e-54 | -8.615850e-47 |
| Msa0244270 | Msa0647380 | 0.816966 | 4.209795e-52 | -8.615850e-47 |
| Msa0244780 | Msa0647380 | 0.806660 | 7.383828e-50 | -8.615850e-47 |
| Msa0246690 | Msa0647380 | 0.827818 | 1.268143e-54 | -8.615850e-47 |
| Msa0257310 | Msa0647380 | 0.808217 | 3.452092e-50 | -8.615850e-47 |
| Msa0260240 | Msa0647380 | 0.809808 | 1.575377e-50 | -8.615850e-47 |
| Msa0260280 | Msa0647380 | 0.813301 | 2.743132e-51 | -8.615850e-47 |
| Msa0264570 | Msa0647380 | 0.806298 | 8.803029e-50 | -8.615850e-47 |
| Msa0267760 | Msa0647380 | 0.825401 | 4.782963e-54 | -8.615850e-47 |
| Msa0268130 | Msa0647380 | 0.811286 | 7.554650e-51 | -8.615850e-47 |
| Msa0275030 | Msa0647380 | 0.823229 | 1.549793e-53 | -8.615850e-47 |
| Msa0280490 | Msa0647380 | 0.854618 | 1.091957e-61 | -8.615850e-47 |
| Msa0280900 | Msa0647380 | 0.831606 | 1.517282e-55 | -8.615850e-47 |
| Msa0298990 | Msa0647380 | 0.806771 | 6.996819e-50 | -8.615850e-47 |
| Msa0304260 | Msa0647380 | 0.809338 | 1.988398e-50 | -8.615850e-47 |
| Msa0304300 | Msa0647380 | 0.818007 | 2.453159e-52 | -8.615850e-47 |
| Msa0319200 | Msa0647380 | 0.819116 | 1.375425e-52 | -8.615850e-47 |
| Msa0320100 | Msa0647380 | 0.809950 | 1.468809e-50 | -8.615850e-47 |
| Msa0328210 | Msa0647380 | 0.835255 | 1.866066e-56 | -8.615850e-47 |
| Msa0344640 | Msa0647380 | 0.807018 | 6.202600e-50 | -8.615850e-47 |
| Msa0355270 | Msa0647380 | 0.832342 | 9.982134e-56 | -8.615850e-47 |
| Msa0484690 | Msa0647380 | 0.834445 | 2.985021e-56 | -8.615850e-47 |
| Msa0487910 | Msa0647380 | 0.817734 | 2.827885e-52 | -8.615850e-47 |
| Msa0490300 | Msa0647380 | 0.827286 | 1.701478e-54 | -8.615850e-47 |
| Msa0508590 | Msa0647380 | 0.817287 | 3.565534e-52 | -8.615850e-47 |
| Msa0508630 | Msa0647380 | 0.820948 | 5.236655e-53 | -8.615850e-47 |
| Msa0510960 | Msa0647380 | 0.800553 | 1.365638e-48 | -8.615850e-47 |
| Msa0518040 | Msa0647380 | 0.824571 | 7.508188e-54 | -8.615850e-47 |
| Msa0519220 | Msa0647380 | 0.821903 | 3.152283e-53 | -8.615850e-47 |
| Msa0521880 | Msa0647380 | 0.803566 | 3.279704e-49 | -8.615850e-47 |
| Msa0525340 | Msa0647380 | 0.835392 | 1.723052e-56 | -8.615850e-47 |
| Msa0526700 | Msa0647380 | 0.807161 | 5.785857e-50 | -8.615850e-47 |
| Msa0526710 | Msa0647380 | 0.819645 | 1.041659e-52 | -8.615850e-47 |
| Msa0527590 | Msa0647380 | 0.828710 | 7.729395e-55 | -8.615850e-47 |
| Msa0527600 | Msa0647380 | 0.819210 | 1.308846e-52 | -8.615850e-47 |
| Msa0532840 | Msa0647380 | 0.818839 | 1.589675e-52 | -8.615850e-47 |
| Msa0533010 | Msa0647380 | 0.817403 | 3.358513e-52 | -8.615850e-47 |
| Msa0535030 | Msa0647380 | 0.837435 | 5.207941e-57 | -8.615850e-47 |
| Msa0535060 | Msa0647380 | 0.830800 | 2.395156e-55 | -8.615850e-47 |
| Msa0541860 | Msa0647380 | 0.807561 | 4.759978e-50 | -8.615850e-47 |
| Msa0546380 | Msa0647380 | 0.818023 | 2.432767e-52 | -8.615850e-47 |
| Msa0546840 | Msa0647380 | 0.814080 | 1.848384e-51 | -8.615850e-47 |
| Msa0553150 | Msa0647380 | 0.865074 | 7.683466e-65 | -8.615850e-47 |
| Msa0555910 | Msa0647380 | 0.813925 | 1.999537e-51 | -8.615850e-47 |
| Msa0564930 | Msa0647380 | 0.802630 | 5.121386e-49 | -8.615850e-47 |
| Msa0576940 | Msa0647380 | 0.806340 | 8.628199e-50 | -8.615850e-47 |
| Msa0590680 | Msa0647380 | 0.805760 | 1.142771e-49 | -8.615850e-47 |
| Msa0591060 | Msa0647380 | 0.839502 | 1.525009e-57 | -8.615850e-47 |
| Msa0591770 | Msa0647380 | 0.844154 | 9.013419e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0647380 | MtrunA17_Chr4g0038821 | 97.059 | 68 | 2 | 0 | 1 | 68 | 1 | 68 | 1.37e-44 | 137 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0647380 | AT3G22210.1 | 62.500 | 64 | 23 | 1 | 5 | 68 | 6 | 68 | 1.55e-20 | 77.0 |
Find 20 sgRNAs with CRISPR-Local
Find 26 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAATTCGCTCTTCCAGTTT+TGG | 0.231911 | 4_3:+53473831 | Msa0647380:CDS |
| CGAGGGAGAAAAGTCATTTA+AGG | 0.295877 | 4_3:-53474428 | None:intergenic |
| GTCTTCTAGCTCGCCTCTCT+CGG | 0.346161 | 4_3:-53474061 | None:intergenic |
| GACAGAAATCACTTCAAGAT+TGG | 0.349085 | 4_3:+53473991 | Msa0647380:intron |
| GCTGCAACAATGCCCAAAAC+TGG | 0.365881 | 4_3:-53473844 | None:intergenic |
| AGCTCGCCTCTCTCGGGAGC+TGG | 0.377870 | 4_3:-53474054 | None:intergenic |
| GAGAGATATATCATCAGAAA+TGG | 0.429163 | 4_3:+53473801 | Msa0647380:exon |
| AGTAGCAAATTGTTTGTACT+AGG | 0.459932 | 4_3:+53474198 | Msa0647380:three_prime_UTR |
| ACAGAAATCACTTCAAGATT+GGG | 0.482353 | 4_3:+53473992 | Msa0647380:intron |
| ATTGAAACTCACTGCATAGA+AGG | 0.485260 | 4_3:-53473878 | None:intergenic |
| TCTTCTAGCTCGCCTCTCTC+GGG | 0.500761 | 4_3:-53474060 | None:intergenic |
| ACCAACAAGAACTATTGAAA+AGG | 0.500770 | 4_3:-53474229 | None:intergenic |
| GGAGAAAAGTCATTTAAGGA+TGG | 0.516791 | 4_3:-53474424 | None:intergenic |
| CTCTCTCGGGAGCTGGACGT+TGG | 0.528180 | 4_3:-53474047 | None:intergenic |
| GATGATTCTGAATCAGAGAA+TGG | 0.538128 | 4_3:+53474014 | Msa0647380:CDS |
| GAGAAAAGTCATTTAAGGAT+GGG | 0.540563 | 4_3:-53474423 | None:intergenic |
| CAACGTCCAGCTCCCGAGAG+AGG | 0.600475 | 4_3:+53474048 | Msa0647380:CDS |
| GAGTTTCAATGAGATTAGAG+AGG | 0.641117 | 4_3:+53473891 | Msa0647380:CDS |
| GATTCTGAATCAGAGAATGG+AGG | 0.645594 | 4_3:+53474017 | Msa0647380:CDS |
| GTGAGACTAGTCACTGACCC+AGG | 0.670217 | 4_3:-53474350 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TACATTTTTCTAATAGAAAA+TGG | - | chr4_3:53474278-53474297 | None:intergenic | 15.0% |
| !!! | CTGTCATAATTCAATTTTAT+AGG | - | chr4_3:53473976-53473995 | None:intergenic | 20.0% |
| !!! | ATTTCTTTATTTTTGATGCT+AGG | + | chr4_3:53474158-53474177 | Msa0647380:three_prime_UTR | 20.0% |
| !!! | TTGCTGTTGAAGTTATTTTT+TGG | - | chr4_3:53474102-53474121 | None:intergenic | 25.0% |
| GAGAGATATATCATCAGAAA+TGG | + | chr4_3:53473801-53473820 | Msa0647380:exon | 30.0% | |
| ACAGAAATCACTTCAAGATT+GGG | + | chr4_3:53473992-53474011 | Msa0647380:intron | 30.0% | |
| AGTAGCAAATTGTTTGTACT+AGG | + | chr4_3:53474198-53474217 | Msa0647380:three_prime_UTR | 30.0% | |
| ! | ACCTTTTCAATAGTTCTTGT+TGG | + | chr4_3:53474228-53474247 | Msa0647380:three_prime_UTR | 30.0% |
| ACCAACAAGAACTATTGAAA+AGG | - | chr4_3:53474232-53474251 | None:intergenic | 30.0% | |
| !!! | ACATTTTTTGTGTTTTCTCC+TGG | + | chr4_3:53474332-53474351 | Msa0647380:three_prime_UTR | 30.0% |
| !!! | CATTTTTTGTGTTTTCTCCT+GGG | + | chr4_3:53474333-53474352 | Msa0647380:three_prime_UTR | 30.0% |
| !!! | CATGCAACTATTTTAATCTC+TGG | - | chr4_3:53474390-53474409 | None:intergenic | 30.0% |
| ATTGAAACTCACTGCATAGA+AGG | - | chr4_3:53473881-53473900 | None:intergenic | 35.0% | |
| GAGTTTCAATGAGATTAGAG+AGG | + | chr4_3:53473891-53473910 | Msa0647380:CDS | 35.0% | |
| GACAGAAATCACTTCAAGAT+TGG | + | chr4_3:53473991-53474010 | Msa0647380:intron | 35.0% | |
| GATGATTCTGAATCAGAGAA+TGG | + | chr4_3:53474014-53474033 | Msa0647380:CDS | 35.0% | |
| ! | CAATTCGCTCTTCCAGTTTT+GGG | + | chr4_3:53473832-53473851 | Msa0647380:CDS | 40.0% |
| GATTCTGAATCAGAGAATGG+AGG | + | chr4_3:53474017-53474036 | Msa0647380:CDS | 40.0% | |
| ! | GCAATTCGCTCTTCCAGTTT+TGG | + | chr4_3:53473831-53473850 | Msa0647380:CDS | 45.0% |
| GCTGCAACAATGCCCAAAAC+TGG | - | chr4_3:53473847-53473866 | None:intergenic | 50.0% | |
| !! | TCTTCTAGCTCGCCTCTCTC+GGG | - | chr4_3:53474063-53474082 | None:intergenic | 55.0% |
| !! | GTCTTCTAGCTCGCCTCTCT+CGG | - | chr4_3:53474064-53474083 | None:intergenic | 55.0% |
| ! | GTGAGACTAGTCACTGACCC+AGG | - | chr4_3:53474353-53474372 | None:intergenic | 55.0% |
| CTCTCTCGGGAGCTGGACGT+TGG | - | chr4_3:53474050-53474069 | None:intergenic | 65.0% | |
| CAACGTCCAGCTCCCGAGAG+AGG | + | chr4_3:53474048-53474067 | Msa0647380:CDS | 65.0% | |
| AGCTCGCCTCTCTCGGGAGC+TGG | - | chr4_3:53474057-53474076 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 53473770 | 53474444 | 53473770 | ID=Msa0647380;Name=Msa0647380 |
| chr4_3 | mRNA | 53473770 | 53474444 | 53473770 | ID=Msa0647380-mRNA-1;Parent=Msa0647380;Name=Msa0647380-mRNA-1;_AED=0.05;_eAED=0.05;_QI=50|1|1|1|1|1|2|335|68 |
| chr4_3 | exon | 53473770 | 53473912 | 53473770 | ID=Msa0647380-mRNA-1:exon:13330;Parent=Msa0647380-mRNA-1 |
| chr4_3 | exon | 53473996 | 53474444 | 53473996 | ID=Msa0647380-mRNA-1:exon:13331;Parent=Msa0647380-mRNA-1 |
| chr4_3 | five_prime_UTR | 53473770 | 53473819 | 53473770 | ID=Msa0647380-mRNA-1:five_prime_utr;Parent=Msa0647380-mRNA-1 |
| chr4_3 | CDS | 53473820 | 53473912 | 53473820 | ID=Msa0647380-mRNA-1:cds;Parent=Msa0647380-mRNA-1 |
| chr4_3 | CDS | 53473996 | 53474109 | 53473996 | ID=Msa0647380-mRNA-1:cds;Parent=Msa0647380-mRNA-1 |
| chr4_3 | three_prime_UTR | 53474110 | 53474444 | 53474110 | ID=Msa0647380-mRNA-1:three_prime_utr;Parent=Msa0647380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
