Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1118720 | XP_003624636.3 | 97.289 | 332 | 9 | 0 | 1 | 332 | 155 | 486 | 0.0 | 682 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1118720 | sp|Q9FFN2|GLYT3_ARATH | 39.412 | 340 | 183 | 10 | 1 | 327 | 186 | 515 | 6.10e-65 | 216 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1118720 | Q2HVN7 | 97.289 | 332 | 9 | 0 | 1 | 332 | 155 | 486 | 0.0 | 682 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0026420 | Msa1118720 | 0.861552 | 9.467906e-64 | -8.615850e-47 |
| Msa0046680 | Msa1118720 | 0.808358 | 3.220727e-50 | -8.615850e-47 |
| Msa0051480 | Msa1118720 | 0.834752 | 2.498568e-56 | -8.615850e-47 |
| Msa0051620 | Msa1118720 | 0.852041 | 5.986152e-61 | -8.615850e-47 |
| Msa0051730 | Msa1118720 | 0.852115 | 5.703121e-61 | -8.615850e-47 |
| Msa0107830 | Msa1118720 | 0.805006 | 1.644186e-49 | -8.615850e-47 |
| Msa0652590 | Msa1118720 | 0.806667 | 7.359100e-50 | -8.615850e-47 |
| Msa0657340 | Msa1118720 | 0.813680 | 2.264314e-51 | -8.615850e-47 |
| Msa0660650 | Msa1118720 | 0.806623 | 7.519641e-50 | -8.615850e-47 |
| Msa0694320 | Msa1118720 | 0.829531 | 4.886583e-55 | -8.615850e-47 |
| Msa0701490 | Msa1118720 | 0.812588 | 3.931245e-51 | -8.615850e-47 |
| Msa0701560 | Msa1118720 | 0.810537 | 1.097306e-50 | -8.615850e-47 |
| Msa0704560 | Msa1118720 | 0.832160 | 1.107372e-55 | -8.615850e-47 |
| Msa0716620 | Msa1118720 | 0.808426 | 3.115481e-50 | -8.615850e-47 |
| Msa0727230 | Msa1118720 | 0.809372 | 1.955252e-50 | -8.615850e-47 |
| Msa0740630 | Msa1118720 | 0.801774 | 7.683788e-49 | -8.615850e-47 |
| Msa0744550 | Msa1118720 | 0.827298 | 1.690106e-54 | -8.615850e-47 |
| Msa0744560 | Msa1118720 | 0.831952 | 1.247106e-55 | -8.615850e-47 |
| Msa0793270 | Msa1118720 | 0.807511 | 4.877937e-50 | -8.615850e-47 |
| Msa0795320 | Msa1118720 | 0.831333 | 1.771508e-55 | -8.615850e-47 |
| Msa0820880 | Msa1118720 | 0.805093 | 1.576350e-49 | -8.615850e-47 |
| Msa0826360 | Msa1118720 | 0.813420 | 2.582674e-51 | -8.615850e-47 |
| Msa0826370 | Msa1118720 | 0.826863 | 2.148210e-54 | -8.615850e-47 |
| Msa0826380 | Msa1118720 | 0.803329 | 3.671443e-49 | -8.615850e-47 |
| Msa0826450 | Msa1118720 | 0.814428 | 1.548624e-51 | -8.615850e-47 |
| Msa0829990 | Msa1118720 | 0.800015 | 1.757051e-48 | -8.615850e-47 |
| Msa0143640 | Msa1118720 | 0.848725 | 5.104458e-60 | -8.615850e-47 |
| Msa0146090 | Msa1118720 | 0.834708 | 2.564066e-56 | -8.615850e-47 |
| Msa0146200 | Msa1118720 | 0.834769 | 2.474663e-56 | -8.615850e-47 |
| Msa0150620 | Msa1118720 | 0.800392 | 1.472896e-48 | -8.615850e-47 |
| Msa0162680 | Msa1118720 | 0.805693 | 1.179960e-49 | -8.615850e-47 |
| Msa0185100 | Msa1118720 | 0.829101 | 6.214540e-55 | -8.615850e-47 |
| Msa0186240 | Msa1118720 | 0.801965 | 7.020883e-49 | -8.615850e-47 |
| Msa0191470 | Msa1118720 | 0.808975 | 2.378198e-50 | -8.615850e-47 |
| Msa0193190 | Msa1118720 | 0.810443 | 1.150074e-50 | -8.615850e-47 |
| Msa0202380 | Msa1118720 | 0.805888 | 1.073996e-49 | -8.615850e-47 |
| Msa0204170 | Msa1118720 | 0.802781 | 4.765864e-49 | -8.615850e-47 |
| Msa0378320 | Msa1118720 | 0.807453 | 5.017157e-50 | -8.615850e-47 |
| Msa0389710 | Msa1118720 | 0.800459 | 1.426820e-48 | -8.615850e-47 |
| Msa0390160 | Msa1118720 | 0.804874 | 1.752038e-49 | -8.615850e-47 |
| Msa0390170 | Msa1118720 | 0.806355 | 8.564349e-50 | -8.615850e-47 |
| Msa0390200 | Msa1118720 | 0.809299 | 2.026994e-50 | -8.615850e-47 |
| Msa0393100 | Msa1118720 | 0.851437 | 8.878986e-61 | -8.615850e-47 |
| Msa0402800 | Msa1118720 | 0.811468 | 6.898050e-51 | -8.615850e-47 |
| Msa0405210 | Msa1118720 | 0.802538 | 5.350007e-49 | -8.615850e-47 |
| Msa0427560 | Msa1118720 | 0.805097 | 1.573444e-49 | -8.615850e-47 |
| Msa0427660 | Msa1118720 | 0.808010 | 3.821421e-50 | -8.615850e-47 |
| Msa0438070 | Msa1118720 | 0.832960 | 7.012723e-56 | -8.615850e-47 |
| Msa0447160 | Msa1118720 | 0.800674 | 1.290050e-48 | -8.615850e-47 |
| Msa0449490 | Msa1118720 | 0.812172 | 4.847134e-51 | -8.615850e-47 |
| Msa0449620 | Msa1118720 | 0.814560 | 1.447485e-51 | -8.615850e-47 |
| Msa0466850 | Msa1118720 | 0.809587 | 1.757457e-50 | -8.615850e-47 |
| Msa0478080 | Msa1118720 | 0.810646 | 1.039144e-50 | -8.615850e-47 |
| Msa0480540 | Msa1118720 | 0.826954 | 2.043247e-54 | -8.615850e-47 |
| Msa0480550 | Msa1118720 | 0.831567 | 1.551197e-55 | -8.615850e-47 |
| Msa0481770 | Msa1118720 | 0.819068 | 1.410224e-52 | -8.615850e-47 |
| Msa1027910 | Msa1118720 | 0.839770 | 1.298962e-57 | -8.615850e-47 |
| Msa1030210 | Msa1118720 | 0.839868 | 1.224934e-57 | -8.615850e-47 |
| Msa1031780 | Msa1118720 | 0.960574 | 1.033993e-118 | -8.615850e-47 |
| Msa1035050 | Msa1118720 | 0.820795 | 5.678885e-53 | -8.615850e-47 |
| Msa1041250 | Msa1118720 | 0.808053 | 3.741382e-50 | -8.615850e-47 |
| Msa1061840 | Msa1118720 | 0.800405 | 1.463975e-48 | -8.615850e-47 |
| Msa1069250 | Msa1118720 | 0.872408 | 3.254780e-67 | -8.615850e-47 |
| Msa1071350 | Msa1118720 | 0.801539 | 8.585686e-49 | -8.615850e-47 |
| Msa1075090 | Msa1118720 | 0.818854 | 1.577004e-52 | -8.615850e-47 |
| Msa1084890 | Msa1118720 | 0.814190 | 1.748000e-51 | -8.615850e-47 |
| Msa1095590 | Msa1118720 | 0.813623 | 2.330900e-51 | -8.615850e-47 |
| Msa1102210 | Msa1118720 | 0.812652 | 3.806903e-51 | -8.615850e-47 |
| Msa0246140 | Msa1118720 | 0.814460 | 1.523377e-51 | -8.615850e-47 |
| Msa0257760 | Msa1118720 | 0.801817 | 7.529907e-49 | -8.615850e-47 |
| Msa0267700 | Msa1118720 | 0.816514 | 5.318643e-52 | -8.615850e-47 |
| Msa0271700 | Msa1118720 | 0.822988 | 1.764159e-53 | -8.615850e-47 |
| Msa0271720 | Msa1118720 | 0.823652 | 1.234546e-53 | -8.615850e-47 |
| Msa0273070 | Msa1118720 | 0.827700 | 1.353495e-54 | -8.615850e-47 |
| Msa0275730 | Msa1118720 | 0.805385 | 1.369651e-49 | -8.615850e-47 |
| Msa0284730 | Msa1118720 | 0.809557 | 1.784427e-50 | -8.615850e-47 |
| Msa0306310 | Msa1118720 | 0.802181 | 6.337109e-49 | -8.615850e-47 |
| Msa0312300 | Msa1118720 | 0.807390 | 5.175568e-50 | -8.615850e-47 |
| Msa0319680 | Msa1118720 | 0.808216 | 3.454145e-50 | -8.615850e-47 |
| Msa0324810 | Msa1118720 | 0.818010 | 2.449938e-52 | -8.615850e-47 |
| Msa0332360 | Msa1118720 | 0.820912 | 5.338862e-53 | -8.615850e-47 |
| Msa0340370 | Msa1118720 | 0.801833 | 7.471723e-49 | -8.615850e-47 |
| Msa0345890 | Msa1118720 | 0.808952 | 2.405217e-50 | -8.615850e-47 |
| Msa0345980 | Msa1118720 | 0.839817 | 1.262802e-57 | -8.615850e-47 |
| Msa1107510 | Msa1118720 | 0.811648 | 6.303326e-51 | -8.615850e-47 |
| Msa1110900 | Msa1118720 | 0.815953 | 7.097547e-52 | -8.615850e-47 |
| Msa1115980 | Msa1118720 | 0.812643 | 3.824221e-51 | -8.615850e-47 |
| Msa1118720 | Msa1120580 | 0.830280 | 3.209937e-55 | -8.615850e-47 |
| Msa1118720 | Msa1131120 | 0.815265 | 1.010163e-51 | -8.615850e-47 |
| Msa1118720 | Msa1137750 | 0.803866 | 2.841481e-49 | -8.615850e-47 |
| Msa1118720 | Msa1157110 | 0.813349 | 2.677489e-51 | -8.615850e-47 |
| Msa1118720 | Msa1165670 | 0.802903 | 4.497381e-49 | -8.615850e-47 |
| Msa1118720 | Msa1174280 | 0.835030 | 2.127087e-56 | -8.615850e-47 |
| Msa1118720 | Msa1179340 | 0.802190 | 6.311553e-49 | -8.615850e-47 |
| Msa1118720 | Msa1202110 | 0.826111 | 3.246163e-54 | -8.615850e-47 |
| Msa1118720 | Msa1211610 | 0.844584 | 6.904177e-59 | -8.615850e-47 |
| Msa1118720 | Msa1217260 | 0.810349 | 1.204989e-50 | -8.615850e-47 |
| Msa1118720 | Msa1223560 | 0.818985 | 1.472770e-52 | -8.615850e-47 |
| Msa1118720 | Msa1233090 | 0.803441 | 3.481635e-49 | -8.615850e-47 |
| Msa1118720 | Msa1254870 | 0.824976 | 6.028011e-54 | -8.615850e-47 |
| Msa1118720 | Msa1262540 | 0.803912 | 2.779617e-49 | -8.615850e-47 |
| Msa1118720 | Msa1263500 | 0.809884 | 1.517643e-50 | -8.615850e-47 |
| Msa1118720 | Msa1279060 | 0.823918 | 1.069451e-53 | -8.615850e-47 |
| Msa1118720 | Msa1299480 | 0.844989 | 5.371414e-59 | -8.615850e-47 |
| Msa1118720 | Msa1328430 | 0.827401 | 1.596816e-54 | -8.615850e-47 |
| Msa1118720 | Msa1349830 | 0.837508 | 4.986791e-57 | -8.615850e-47 |
| Msa1118720 | Msa1359770 | 0.809793 | 1.587175e-50 | -8.615850e-47 |
| Msa1118720 | Msa1361710 | 0.804018 | 2.642513e-49 | -8.615850e-47 |
| Msa1118720 | Msa1366480 | 0.822654 | 2.109939e-53 | -8.615850e-47 |
| Msa1118720 | Msa1369320 | 0.827632 | 1.405518e-54 | -8.615850e-47 |
| Msa1118720 | Msa1377050 | 0.820105 | 8.174809e-53 | -8.615850e-47 |
| Msa1118720 | Msa1387610 | 0.820289 | 7.419078e-53 | -8.615850e-47 |
| Msa1118720 | Msa1398120 | 0.830386 | 3.023303e-55 | -8.615850e-47 |
| Msa1118720 | Msa1398140 | 0.804969 | 1.673406e-49 | -8.615850e-47 |
| Msa1118720 | Msa1401110 | 0.832732 | 7.991439e-56 | -8.615850e-47 |
| Msa1118720 | Msa1427000 | 0.833717 | 4.542480e-56 | -8.615850e-47 |
| Msa1118720 | Msa1439780 | 0.832548 | 8.875863e-56 | -8.615850e-47 |
| Msa1118720 | Msa1449470 | 0.820750 | 5.815484e-53 | -8.615850e-47 |
| Msa1118720 | Msa1453600 | 0.819789 | 9.657763e-53 | -8.615850e-47 |
| Msa1118720 | Msa1459920 | 0.819168 | 1.338172e-52 | -8.615850e-47 |
| Msa1118720 | Msa1459930 | 0.813831 | 2.097253e-51 | -8.615850e-47 |
| Msa0488580 | Msa1118720 | 0.808313 | 3.293437e-50 | -8.615850e-47 |
| Msa0493870 | Msa1118720 | 0.810056 | 1.393397e-50 | -8.615850e-47 |
| Msa0497860 | Msa1118720 | 0.814840 | 1.254936e-51 | -8.615850e-47 |
| Msa0508160 | Msa1118720 | 0.823201 | 1.573715e-53 | -8.615850e-47 |
| Msa0510870 | Msa1118720 | 0.800105 | 1.684876e-48 | -8.615850e-47 |
| Msa0513670 | Msa1118720 | 0.809503 | 1.832210e-50 | -8.615850e-47 |
| Msa0518190 | Msa1118720 | 0.806479 | 8.062497e-50 | -8.615850e-47 |
| Msa0518490 | Msa1118720 | 0.803233 | 3.843686e-49 | -8.615850e-47 |
| Msa0522170 | Msa1118720 | 0.803694 | 3.084129e-49 | -8.615850e-47 |
| Msa0556270 | Msa1118720 | 0.804181 | 2.443928e-49 | -8.615850e-47 |
| Msa0565120 | Msa1118720 | 0.805622 | 1.221437e-49 | -8.615850e-47 |
| Msa0565180 | Msa1118720 | 0.815515 | 8.887358e-52 | -8.615850e-47 |
| Msa0566530 | Msa1118720 | 0.808872 | 2.501787e-50 | -8.615850e-47 |
| Msa0568110 | Msa1118720 | 0.818119 | 2.314485e-52 | -8.615850e-47 |
| Msa0570460 | Msa1118720 | 0.844121 | 9.200270e-59 | -8.615850e-47 |
| Msa0572700 | Msa1118720 | 0.806665 | 7.366911e-50 | -8.615850e-47 |
| Msa0580840 | Msa1118720 | 0.837604 | 4.713450e-57 | -8.615850e-47 |
| Msa0859040 | Msa1118720 | 0.802142 | 6.456329e-49 | -8.615850e-47 |
| Msa0863940 | Msa1118720 | 0.803491 | 3.398178e-49 | -8.615850e-47 |
| Msa0865810 | Msa1118720 | 0.828029 | 1.128207e-54 | -8.615850e-47 |
| Msa0865820 | Msa1118720 | 0.816012 | 6.884464e-52 | -8.615850e-47 |
| Msa0865830 | Msa1118720 | 0.833180 | 6.183451e-56 | -8.615850e-47 |
| Msa0873940 | Msa1118720 | 0.807811 | 4.211187e-50 | -8.615850e-47 |
| Msa0874750 | Msa1118720 | 0.812553 | 4.001852e-51 | -8.615850e-47 |
| Msa0881510 | Msa1118720 | 0.813894 | 2.031764e-51 | -8.615850e-47 |
| Msa0906680 | Msa1118720 | 0.812978 | 3.229283e-51 | -8.615850e-47 |
| Msa0921790 | Msa1118720 | 0.832961 | 7.010732e-56 | -8.615850e-47 |
| Msa0960580 | Msa1118720 | 0.819164 | 1.340738e-52 | -8.615850e-47 |
| Msa0976400 | Msa1118720 | 0.816834 | 4.507727e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1118720 | MtrunA17_Chr7g0253441 | 97.289 | 332 | 9 | 0 | 1 | 332 | 155 | 486 | 0.0 | 682 |
| Msa1118720 | MtrunA17_Chr5g0411991 | 43.675 | 332 | 172 | 7 | 1 | 325 | 90 | 413 | 3.48e-91 | 278 |
| Msa1118720 | MtrunA17_Chr7g0265451 | 39.763 | 337 | 176 | 10 | 1 | 322 | 186 | 510 | 5.79e-69 | 224 |
| Msa1118720 | MtrunA17_Chr7g0265461 | 38.192 | 343 | 183 | 9 | 1 | 327 | 69 | 398 | 3.30e-66 | 213 |
| Msa1118720 | MtrunA17_Chr1g0179651 | 38.209 | 335 | 185 | 10 | 1 | 322 | 9 | 334 | 9.21e-66 | 210 |
| Msa1118720 | MtrunA17_Chr3g0137491 | 38.484 | 343 | 187 | 11 | 1 | 328 | 59 | 392 | 2.83e-63 | 206 |
| Msa1118720 | MtrunA17_Chr3g0131051 | 36.765 | 340 | 192 | 9 | 1 | 327 | 162 | 491 | 8.83e-62 | 204 |
| Msa1118720 | MtrunA17_Chr7g0265381 | 36.443 | 343 | 180 | 12 | 1 | 322 | 44 | 369 | 2.96e-61 | 200 |
| Msa1118720 | MtrunA17_Chr4g0055991 | 35.756 | 344 | 187 | 10 | 1 | 322 | 200 | 531 | 5.07e-61 | 203 |
| Msa1118720 | MtrunA17_Chr4g0064471 | 36.628 | 344 | 183 | 10 | 1 | 322 | 135 | 465 | 3.80e-60 | 199 |
| Msa1118720 | MtrunA17_Chr3g0119721 | 36.232 | 345 | 183 | 10 | 1 | 325 | 15 | 342 | 1.97e-58 | 191 |
| Msa1118720 | MtrunA17_Chr3g0140131 | 36.599 | 347 | 174 | 14 | 1 | 322 | 264 | 589 | 2.01e-57 | 195 |
| Msa1118720 | MtrunA17_Chr1g0197381 | 36.982 | 338 | 185 | 13 | 1 | 324 | 222 | 545 | 1.09e-56 | 192 |
| Msa1118720 | MtrunA17_Chr3g0140141 | 35.530 | 349 | 175 | 12 | 1 | 322 | 222 | 547 | 5.29e-56 | 191 |
| Msa1118720 | MtrunA17_Chr8g0390121 | 35.549 | 346 | 180 | 13 | 1 | 322 | 279 | 605 | 6.16e-56 | 191 |
| Msa1118720 | MtrunA17_Chr1g0146181 | 36.047 | 344 | 180 | 13 | 1 | 322 | 257 | 582 | 2.21e-55 | 189 |
| Msa1118720 | MtrunA17_Chr3g0120131 | 35.799 | 338 | 198 | 9 | 1 | 327 | 153 | 482 | 6.40e-55 | 186 |
| Msa1118720 | MtrunA17_Chr4g0064461 | 34.593 | 344 | 190 | 12 | 1 | 322 | 130 | 460 | 1.71e-53 | 182 |
| Msa1118720 | MtrunA17_Chr4g0064411 | 33.333 | 351 | 197 | 11 | 1 | 329 | 129 | 464 | 1.22e-50 | 174 |
| Msa1118720 | MtrunA17_Chr5g0421571 | 41.463 | 205 | 111 | 6 | 1 | 203 | 143 | 340 | 1.66e-42 | 150 |
| Msa1118720 | MtrunA17_Chr5g0436111 | 27.027 | 333 | 153 | 13 | 1 | 325 | 49 | 299 | 6.34e-29 | 113 |
| Msa1118720 | MtrunA17_Chr2g0320251 | 27.532 | 316 | 195 | 9 | 33 | 318 | 115 | 426 | 8.27e-26 | 107 |
| Msa1118720 | MtrunA17_Chr8g0385671 | 25.484 | 310 | 205 | 8 | 33 | 318 | 77 | 384 | 2.78e-23 | 99.4 |
| Msa1118720 | MtrunA17_Chr4g0028201 | 26.814 | 317 | 196 | 11 | 33 | 318 | 133 | 444 | 5.05e-23 | 99.4 |
| Msa1118720 | MtrunA17_Chr8g0385651 | 25.161 | 310 | 206 | 8 | 33 | 318 | 77 | 384 | 2.95e-22 | 96.7 |
| Msa1118720 | MtrunA17_Chr3g0092341 | 24.579 | 297 | 196 | 9 | 50 | 325 | 188 | 477 | 6.22e-18 | 84.3 |
| Msa1118720 | MtrunA17_Chr7g0254391 | 26.117 | 291 | 174 | 11 | 51 | 314 | 190 | 466 | 3.58e-16 | 79.3 |
| Msa1118720 | MtrunA17_Chr6g0460631 | 25.172 | 290 | 178 | 10 | 51 | 314 | 185 | 461 | 6.87e-15 | 75.5 |
| Msa1118720 | MtrunA17_Chr4g0039811 | 25.685 | 292 | 169 | 12 | 43 | 304 | 173 | 446 | 7.64e-14 | 72.0 |
| Msa1118720 | MtrunA17_Chr4g0043801 | 24.638 | 276 | 180 | 10 | 52 | 304 | 163 | 433 | 8.00e-14 | 72.0 |
| Msa1118720 | MtrunA17_Chr8g0377331 | 23.793 | 290 | 190 | 8 | 52 | 318 | 117 | 398 | 2.99e-13 | 70.1 |
| Msa1118720 | MtrunA17_Chr1g0159421 | 25.763 | 295 | 168 | 11 | 4 | 262 | 73 | 352 | 3.73e-13 | 70.1 |
| Msa1118720 | MtrunA17_Chr3g0122631 | 22.727 | 286 | 198 | 8 | 52 | 318 | 119 | 400 | 8.56e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1118720 | AT4G38040.1 | 46.037 | 328 | 162 | 8 | 1 | 321 | 100 | 419 | 8.99e-93 | 283 |
| Msa1118720 | AT4G38040.2 | 43.421 | 304 | 157 | 8 | 1 | 297 | 100 | 395 | 1.09e-74 | 236 |
| Msa1118720 | AT4G16745.1 | 39.233 | 339 | 176 | 10 | 1 | 319 | 196 | 524 | 5.14e-69 | 225 |
| Msa1118720 | AT5G03795.1 | 39.412 | 340 | 183 | 10 | 1 | 327 | 186 | 515 | 6.20e-66 | 216 |
| Msa1118720 | AT4G16745.2 | 39.275 | 331 | 171 | 10 | 1 | 311 | 196 | 516 | 1.36e-63 | 212 |
| Msa1118720 | AT5G37000.1 | 38.166 | 338 | 181 | 10 | 1 | 322 | 222 | 547 | 2.43e-63 | 210 |
| Msa1118720 | AT5G11130.2 | 35.127 | 353 | 190 | 11 | 1 | 331 | 1 | 336 | 2.18e-59 | 194 |
| Msa1118720 | AT5G11130.1 | 35.127 | 353 | 190 | 11 | 1 | 331 | 145 | 480 | 4.33e-58 | 195 |
| Msa1118720 | AT5G11610.1 | 36.795 | 337 | 187 | 12 | 1 | 322 | 216 | 541 | 5.73e-57 | 193 |
| Msa1118720 | AT4G32790.1 | 36.994 | 346 | 175 | 13 | 1 | 322 | 263 | 589 | 1.25e-56 | 193 |
| Msa1118720 | AT4G32790.3 | 36.994 | 346 | 175 | 13 | 1 | 322 | 263 | 589 | 1.25e-56 | 193 |
| Msa1118720 | AT4G32790.2 | 36.994 | 346 | 175 | 13 | 1 | 322 | 263 | 589 | 1.25e-56 | 193 |
| Msa1118720 | AT5G19670.1 | 34.783 | 345 | 184 | 11 | 1 | 322 | 277 | 603 | 2.03e-56 | 193 |
| Msa1118720 | AT5G19670.2 | 34.783 | 345 | 184 | 11 | 1 | 322 | 277 | 603 | 2.03e-56 | 193 |
| Msa1118720 | AT5G25310.1 | 34.870 | 347 | 194 | 9 | 1 | 328 | 147 | 480 | 1.30e-55 | 188 |
| Msa1118720 | AT3G42180.4 | 36.246 | 309 | 181 | 7 | 31 | 325 | 31 | 337 | 3.44e-55 | 183 |
| Msa1118720 | AT5G20260.1 | 35.000 | 340 | 197 | 12 | 1 | 325 | 1 | 331 | 9.89e-55 | 182 |
| Msa1118720 | AT3G07620.1 | 35.362 | 345 | 193 | 11 | 1 | 328 | 128 | 459 | 1.62e-54 | 185 |
| Msa1118720 | AT5G20260.3 | 35.000 | 340 | 197 | 12 | 1 | 325 | 28 | 358 | 2.00e-54 | 182 |
| Msa1118720 | AT3G42180.1 | 36.246 | 309 | 181 | 7 | 31 | 325 | 160 | 466 | 5.15e-54 | 184 |
| Msa1118720 | AT5G25820.1 | 35.962 | 317 | 166 | 11 | 31 | 322 | 344 | 648 | 7.95e-54 | 187 |
| Msa1118720 | AT5G20260.2 | 35.312 | 337 | 194 | 12 | 1 | 322 | 133 | 460 | 1.79e-53 | 182 |
| Msa1118720 | AT5G33290.1 | 34.218 | 339 | 200 | 11 | 1 | 322 | 161 | 493 | 7.44e-50 | 173 |
| Msa1118720 | AT5G11610.2 | 32.787 | 244 | 138 | 11 | 1 | 229 | 216 | 448 | 1.00e-23 | 101 |
| Msa1118720 | AT5G61840.1 | 25.407 | 307 | 203 | 8 | 33 | 315 | 76 | 380 | 2.57e-23 | 100 |
| Msa1118720 | AT5G22940.1 | 26.462 | 325 | 189 | 12 | 33 | 319 | 136 | 448 | 2.11e-22 | 97.8 |
| Msa1118720 | AT5G22940.2 | 26.462 | 325 | 189 | 12 | 33 | 319 | 165 | 477 | 2.40e-22 | 97.8 |
| Msa1118720 | AT2G28110.1 | 25.472 | 318 | 201 | 9 | 33 | 318 | 120 | 433 | 3.04e-22 | 97.4 |
| Msa1118720 | AT1G27440.1 | 24.104 | 307 | 207 | 8 | 33 | 315 | 73 | 377 | 6.75e-21 | 93.2 |
| Msa1118720 | AT3G03650.1 | 27.622 | 286 | 178 | 11 | 51 | 315 | 195 | 472 | 1.51e-16 | 80.9 |
| Msa1118720 | AT5G11610.3 | 39.316 | 117 | 60 | 5 | 1 | 111 | 216 | 327 | 1.02e-15 | 77.4 |
| Msa1118720 | AT1G74680.1 | 26.953 | 256 | 150 | 9 | 51 | 280 | 151 | 395 | 1.07e-15 | 78.2 |
| Msa1118720 | AT5G44930.2 | 26.966 | 267 | 171 | 10 | 52 | 301 | 129 | 388 | 1.06e-14 | 75.1 |
| Msa1118720 | AT5G44930.1 | 26.966 | 267 | 171 | 10 | 52 | 301 | 129 | 388 | 1.06e-14 | 75.1 |
| Msa1118720 | AT3G45400.1 | 25.795 | 283 | 183 | 11 | 52 | 314 | 157 | 432 | 7.23e-14 | 72.8 |
| Msa1118720 | AT5G44930.3 | 26.457 | 223 | 148 | 7 | 52 | 262 | 129 | 347 | 4.80e-13 | 69.7 |
| Msa1118720 | AT2G35100.1 | 25.182 | 274 | 176 | 11 | 52 | 304 | 130 | 395 | 2.66e-11 | 64.7 |
Find 58 sgRNAs with CRISPR-Local
Find 196 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATATGGTTATGTATGAATTA+TGG | 0.236996 | 7_3:-67461190 | Msa1118720:CDS |
| AAGTTCTATACCTATTGTTT+TGG | 0.284491 | 7_3:-67461159 | Msa1118720:CDS |
| TGACTTTGATGCATTCTATA+TGG | 0.287970 | 7_3:-67461207 | Msa1118720:CDS |
| ATGCATGCCTACCACAAATT+TGG | 0.291197 | 7_3:-67461985 | Msa1118720:CDS |
| CGTAGACTTGCTATGGAAAA+AGG | 0.292417 | 7_3:+67462241 | None:intergenic |
| CCAACCTTGTTTCATCAAAT+AGG | 0.304692 | 7_3:-67461943 | Msa1118720:intron |
| ATTGGTGATTCATTATACTA+TGG | 0.326408 | 7_3:-67461437 | Msa1118720:CDS |
| CATAGTCTCTAATGAAATCT+TGG | 0.366128 | 7_3:+67462188 | None:intergenic |
| CTGAAAGGTATAGTTAGTTC+TGG | 0.366270 | 7_3:-67461299 | Msa1118720:CDS |
| CCATACGGTGATGAGTTATT+AGG | 0.385062 | 7_3:-67461509 | Msa1118720:CDS |
| AAGTGGTTATATTGCTCATA+AGG | 0.385596 | 7_3:-67462008 | Msa1118720:CDS |
| TATGTGGCATGTCATTCAAT+TGG | 0.444024 | 7_3:-67462106 | Msa1118720:CDS |
| TCATCAAGTTATTTCTTAAG+TGG | 0.445359 | 7_3:-67462025 | Msa1118720:CDS |
| AGAAGAATGTGTTGAAGGTA+AGG | 0.445791 | 7_3:-67461259 | Msa1118720:CDS |
| TAATAGTTGGCAATGATCAC+TGG | 0.452560 | 7_3:+67461407 | None:intergenic |
| TTTCTTGAAGTAACTTTCAC+TGG | 0.456582 | 7_3:+67462324 | None:intergenic |
| AAAAGGAAGGTCATAATAGT+TGG | 0.482102 | 7_3:+67461394 | None:intergenic |
| ATGGCATTGAATTTCACATC+AGG | 0.483309 | 7_3:+67462061 | None:intergenic |
| TTCACTGGCATAATTGCCAC+CGG | 0.483530 | 7_3:+67462339 | None:intergenic |
| TGATGAACAAACAACTTGAA+TGG | 0.484985 | 7_3:+67462042 | None:intergenic |
| CTATTTGATGAAACAAGGTT+GGG | 0.490527 | 7_3:+67461944 | None:intergenic |
| TGATTCACAAGTATCCGTAT+TGG | 0.495104 | 7_3:-67462156 | Msa1118720:CDS |
| CCGACAAGATTTATCCGTAC+TGG | 0.497667 | 7_3:+67461584 | None:intergenic |
| CCTATTTGATGAAACAAGGT+TGG | 0.500790 | 7_3:+67461943 | None:intergenic |
| CCACCGGTGCGGTTCCAATA+CGG | 0.501589 | 7_3:+67462142 | None:intergenic |
| GGATAAATCTTGTCGGGACA+TGG | 0.507298 | 7_3:-67461577 | Msa1118720:CDS |
| CAATTCAAAATATCTGCAAA+AGG | 0.508336 | 7_3:+67461377 | None:intergenic |
| CCAGTACGGATAAATCTTGT+CGG | 0.509401 | 7_3:-67461584 | Msa1118720:CDS |
| ATCATGCCGTAGACTTGCTA+TGG | 0.511496 | 7_3:+67462234 | None:intergenic |
| AAATCTTTGTTCACAATGGA+AGG | 0.521339 | 7_3:-67461541 | Msa1118720:CDS |
| GGTAATAGCACATTTGCAAA+AGG | 0.529147 | 7_3:+67462376 | None:intergenic |
| TTCAATTGGAAGGTCTGCTA+TGG | 0.532886 | 7_3:-67462092 | Msa1118720:CDS |
| GCATGATCGTCGAGTTGGTG+TGG | 0.534409 | 7_3:-67462218 | Msa1118720:CDS |
| GAAGTGAACACAGCACGTAT+TGG | 0.536936 | 7_3:-67461455 | Msa1118720:CDS |
| GAAGAATGTGTTGAAGGTAA+GGG | 0.537595 | 7_3:-67461258 | Msa1118720:CDS |
| TTCTTGGCCAAATTTGTGGT+AGG | 0.544146 | 7_3:+67461978 | None:intergenic |
| CAGTACGGATAAATCTTGTC+GGG | 0.545896 | 7_3:-67461583 | Msa1118720:CDS |
| ATAAAAGTGATCCGCGCCAC+CGG | 0.547434 | 7_3:+67462126 | None:intergenic |
| GAGAAGTGAATTCGCCAGTA+CGG | 0.551348 | 7_3:-67461598 | Msa1118720:CDS |
| GCTACAGAAGAATGTGTTGA+AGG | 0.551649 | 7_3:-67461264 | Msa1118720:CDS |
| CCTAATAACTCATCACCGTA+TGG | 0.554944 | 7_3:+67461509 | None:intergenic |
| TTGGAACCGCACCGGTGGCG+CGG | 0.557524 | 7_3:-67462137 | Msa1118720:CDS |
| TCAAAATATCTGCAAAAGGA+AGG | 0.557935 | 7_3:+67461381 | None:intergenic |
| TTTGATGAAACAAGGTTGGG+TGG | 0.562781 | 7_3:+67461947 | None:intergenic |
| TACTGGCGAATTCACTTCTC+CGG | 0.566201 | 7_3:+67461601 | None:intergenic |
| CTACGGCATGATCGTCGAGT+TGG | 0.573970 | 7_3:-67462223 | Msa1118720:CDS |
| ACAGAAATCTTTGTTCACAA+TGG | 0.577531 | 7_3:-67461545 | Msa1118720:CDS |
| CATGATCGTCGAGTTGGTGT+GGG | 0.578419 | 7_3:-67462217 | Msa1118720:CDS |
| CCGTATTGGAACCGCACCGG+TGG | 0.597029 | 7_3:-67462142 | Msa1118720:CDS |
| TGGCATGTCATTCAATTGGA+AGG | 0.599398 | 7_3:-67462102 | Msa1118720:CDS |
| GGTACCTATTTGATGAAACA+AGG | 0.607743 | 7_3:+67461939 | None:intergenic |
| TATCCGTATTGGAACCGCAC+CGG | 0.608918 | 7_3:-67462145 | Msa1118720:CDS |
| TAGAATGCATCAAAGTCAAG+TGG | 0.609625 | 7_3:+67461212 | None:intergenic |
| GATCGTCGAGTTGGTGTGGG+AGG | 0.616478 | 7_3:-67462214 | Msa1118720:CDS |
| AATGCATCAAAGTCAAGTGG+AGG | 0.658492 | 7_3:+67461215 | None:intergenic |
| TTACCCGTGAAAACTGAACC+CGG | 0.660789 | 7_3:-67462358 | Msa1118720:CDS |
| TCACTGGCATAATTGCCACC+GGG | 0.685601 | 7_3:+67462340 | None:intergenic |
| CCCGTGAAAACTGAACCCGG+TGG | 0.789625 | 7_3:-67462355 | Msa1118720:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAATTTAAAATCTAGTTT+TGG | + | chr7_3:67461799-67461818 | None:intergenic | 10.0% |
| !!! | ATTAATTTAAAATCTAGTTT+TGG | + | chr7_3:67461799-67461818 | None:intergenic | 10.0% |
| !!! | ACTAGATTTTAAATTAATAG+AGG | - | chr7_3:67461801-67461820 | Msa1118720:intron | 15.0% |
| !!! | ACTAGATTTTAAATTAATAG+AGG | - | chr7_3:67461801-67461820 | Msa1118720:intron | 15.0% |
| !!! | ATCAACATGTTTTATATCAT+CGG | - | chr7_3:67461720-67461739 | Msa1118720:intron | 20.0% |
| !!! | TTCAGAATCTTTTTCAATAA+AGG | + | chr7_3:67462258-67462277 | None:intergenic | 20.0% |
| !! | TTATTGAAAAAGATTCTGAA+AGG | - | chr7_3:67462258-67462277 | Msa1118720:CDS | 20.0% |
| !! | ATATGGTTATGTATGAATTA+TGG | - | chr7_3:67462382-67462401 | Msa1118720:CDS | 20.0% |
| !!! | ATCAACATGTTTTATATCAT+CGG | - | chr7_3:67461720-67461739 | Msa1118720:intron | 20.0% |
| !!! | TTCAGAATCTTTTTCAATAA+AGG | + | chr7_3:67462258-67462277 | None:intergenic | 20.0% |
| !! | TTATTGAAAAAGATTCTGAA+AGG | - | chr7_3:67462258-67462277 | Msa1118720:CDS | 20.0% |
| !! | ATATGGTTATGTATGAATTA+TGG | - | chr7_3:67462382-67462401 | Msa1118720:CDS | 20.0% |
| !! | TTGGATCTTTTGTAATGAAA+TGG | + | chr7_3:67461288-67461307 | None:intergenic | 25.0% |
| !!! | TCATCAAGTTATTTCTTAAG+TGG | - | chr7_3:67461547-67461566 | Msa1118720:CDS | 25.0% |
| ! | TAATAAATGTACCTAGAAAG+AGG | + | chr7_3:67461666-67461685 | None:intergenic | 25.0% |
| !!! | CTCCTATTTTTAATCACTAA+CGG | + | chr7_3:67461834-67461853 | None:intergenic | 25.0% |
| ! | TCATAGTTGAAATGTTTCTT+TGG | + | chr7_3:67461890-67461909 | None:intergenic | 25.0% |
| !!! | TTTGCTTTTGTAAAAATGAC+AGG | - | chr7_3:67461929-67461948 | Msa1118720:intron | 25.0% |
| !! | ATTGGTGATTCATTATACTA+TGG | - | chr7_3:67462135-67462154 | Msa1118720:CDS | 25.0% |
| ! | CAATTCAAAATATCTGCAAA+AGG | + | chr7_3:67462198-67462217 | None:intergenic | 25.0% |
| !!! | CTTTTGCAGATATTTTGAAT+TGG | - | chr7_3:67462196-67462215 | Msa1118720:CDS | 25.0% |
| !! | AAGTTCTATACCTATTGTTT+TGG | - | chr7_3:67462413-67462432 | Msa1118720:CDS | 25.0% |
| !! | AGTTCTATACCTATTGTTTT+GGG | - | chr7_3:67462414-67462433 | Msa1118720:CDS | 25.0% |
| !! | TTGGATCTTTTGTAATGAAA+TGG | + | chr7_3:67461288-67461307 | None:intergenic | 25.0% |
| !!! | TCATCAAGTTATTTCTTAAG+TGG | - | chr7_3:67461547-67461566 | Msa1118720:CDS | 25.0% |
| ! | TAATAAATGTACCTAGAAAG+AGG | + | chr7_3:67461666-67461685 | None:intergenic | 25.0% |
| !!! | CTCCTATTTTTAATCACTAA+CGG | + | chr7_3:67461834-67461853 | None:intergenic | 25.0% |
| ! | TCATAGTTGAAATGTTTCTT+TGG | + | chr7_3:67461890-67461909 | None:intergenic | 25.0% |
| !!! | TTTGCTTTTGTAAAAATGAC+AGG | - | chr7_3:67461929-67461948 | Msa1118720:intron | 25.0% |
| !! | ATTGGTGATTCATTATACTA+TGG | - | chr7_3:67462135-67462154 | Msa1118720:CDS | 25.0% |
| ! | CAATTCAAAATATCTGCAAA+AGG | + | chr7_3:67462198-67462217 | None:intergenic | 25.0% |
| !!! | CTTTTGCAGATATTTTGAAT+TGG | - | chr7_3:67462196-67462215 | Msa1118720:CDS | 25.0% |
| !! | AAGTTCTATACCTATTGTTT+TGG | - | chr7_3:67462413-67462432 | Msa1118720:CDS | 25.0% |
| !! | AGTTCTATACCTATTGTTTT+GGG | - | chr7_3:67462414-67462433 | Msa1118720:CDS | 25.0% |
| TTTCTTGAAGTAACTTTCAC+TGG | + | chr7_3:67461251-67461270 | None:intergenic | 30.0% | |
| !! | AAGAAAAGATCTGCTTTTGT+TGG | + | chr7_3:67461307-67461326 | None:intergenic | 30.0% |
| CATAGTCTCTAATGAAATCT+TGG | + | chr7_3:67461387-67461406 | None:intergenic | 30.0% | |
| TGATGAACAAACAACTTGAA+TGG | + | chr7_3:67461533-67461552 | None:intergenic | 30.0% | |
| AAGTGGTTATATTGCTCATA+AGG | - | chr7_3:67461564-67461583 | Msa1118720:CDS | 30.0% | |
| CTATTTGATGAAACAAGGTT+GGG | + | chr7_3:67461631-67461650 | None:intergenic | 30.0% | |
| !!! | CATATTTTTAGACCCAAAAG+TGG | + | chr7_3:67461766-67461785 | None:intergenic | 30.0% |
| ! | TTTTTAATCACTAACGGAGT+TGG | + | chr7_3:67461828-67461847 | None:intergenic | 30.0% |
| CTCCGTTAGTGATTAAAAAT+AGG | - | chr7_3:67461829-67461848 | Msa1118720:intron | 30.0% | |
| CGTTAGTGATTAAAAATAGG+AGG | - | chr7_3:67461832-67461851 | Msa1118720:intron | 30.0% | |
| ACAGAAATCTTTGTTCACAA+TGG | - | chr7_3:67462027-67462046 | Msa1118720:CDS | 30.0% | |
| AAATCTTTGTTCACAATGGA+AGG | - | chr7_3:67462031-67462050 | Msa1118720:CDS | 30.0% | |
| ! | AAGTTCTGTTTTCATGTTAG+AGG | - | chr7_3:67462090-67462109 | Msa1118720:CDS | 30.0% |
| AAAAGGAAGGTCATAATAGT+TGG | + | chr7_3:67462181-67462200 | None:intergenic | 30.0% | |
| TCAAAATATCTGCAAAAGGA+AGG | + | chr7_3:67462194-67462213 | None:intergenic | 30.0% | |
| TGACTTTGATGCATTCTATA+TGG | - | chr7_3:67462365-67462384 | Msa1118720:CDS | 30.0% | |
| !! | GTTCTATACCTATTGTTTTG+GGG | - | chr7_3:67462415-67462434 | Msa1118720:CDS | 30.0% |
| !!! | TTCTATACCTATTGTTTTGG+GGG | - | chr7_3:67462416-67462435 | Msa1118720:CDS | 30.0% |
| TTTCTTGAAGTAACTTTCAC+TGG | + | chr7_3:67461251-67461270 | None:intergenic | 30.0% | |
| !! | AAGAAAAGATCTGCTTTTGT+TGG | + | chr7_3:67461307-67461326 | None:intergenic | 30.0% |
| CATAGTCTCTAATGAAATCT+TGG | + | chr7_3:67461387-67461406 | None:intergenic | 30.0% | |
| TGATGAACAAACAACTTGAA+TGG | + | chr7_3:67461533-67461552 | None:intergenic | 30.0% | |
| AAGTGGTTATATTGCTCATA+AGG | - | chr7_3:67461564-67461583 | Msa1118720:CDS | 30.0% | |
| CTATTTGATGAAACAAGGTT+GGG | + | chr7_3:67461631-67461650 | None:intergenic | 30.0% | |
| !!! | CATATTTTTAGACCCAAAAG+TGG | + | chr7_3:67461766-67461785 | None:intergenic | 30.0% |
| ! | TTTTTAATCACTAACGGAGT+TGG | + | chr7_3:67461828-67461847 | None:intergenic | 30.0% |
| CTCCGTTAGTGATTAAAAAT+AGG | - | chr7_3:67461829-67461848 | Msa1118720:intron | 30.0% | |
| CGTTAGTGATTAAAAATAGG+AGG | - | chr7_3:67461832-67461851 | Msa1118720:intron | 30.0% | |
| ACAGAAATCTTTGTTCACAA+TGG | - | chr7_3:67462027-67462046 | Msa1118720:CDS | 30.0% | |
| AAATCTTTGTTCACAATGGA+AGG | - | chr7_3:67462031-67462050 | Msa1118720:CDS | 30.0% | |
| ! | AAGTTCTGTTTTCATGTTAG+AGG | - | chr7_3:67462090-67462109 | Msa1118720:CDS | 30.0% |
| AAAAGGAAGGTCATAATAGT+TGG | + | chr7_3:67462181-67462200 | None:intergenic | 30.0% | |
| TCAAAATATCTGCAAAAGGA+AGG | + | chr7_3:67462194-67462213 | None:intergenic | 30.0% | |
| TGACTTTGATGCATTCTATA+TGG | - | chr7_3:67462365-67462384 | Msa1118720:CDS | 30.0% | |
| !! | GTTCTATACCTATTGTTTTG+GGG | - | chr7_3:67462415-67462434 | Msa1118720:CDS | 30.0% |
| !!! | TTCTATACCTATTGTTTTGG+GGG | - | chr7_3:67462416-67462435 | Msa1118720:CDS | 30.0% |
| ! | AAAGGATCATCTTTTCTGTG+AGG | + | chr7_3:67461181-67461200 | None:intergenic | 35.0% |
| GGTAATAGCACATTTGCAAA+AGG | + | chr7_3:67461199-67461218 | None:intergenic | 35.0% | |
| ! | CTTTTTCCATAGCAAGTCTA+CGG | - | chr7_3:67461332-67461351 | Msa1118720:CDS | 35.0% |
| TGATTCACAAGTATCCGTAT+TGG | - | chr7_3:67461416-67461435 | Msa1118720:CDS | 35.0% | |
| TATGTGGCATGTCATTCAAT+TGG | - | chr7_3:67461466-67461485 | Msa1118720:CDS | 35.0% | |
| ! | ATGGCATTGAATTTCACATC+AGG | + | chr7_3:67461514-67461533 | None:intergenic | 35.0% |
| ! | TCTTTTCTTGGCCAAATTTG+TGG | + | chr7_3:67461601-67461620 | None:intergenic | 35.0% |
| !! | TTGGGTGGATTTTCTTTTCT+TGG | + | chr7_3:67461613-67461632 | None:intergenic | 35.0% |
| CCTATTTGATGAAACAAGGT+TGG | + | chr7_3:67461632-67461651 | None:intergenic | 35.0% | |
| ! | CCAACCTTGTTTCATCAAAT+AGG | - | chr7_3:67461629-67461648 | Msa1118720:intron | 35.0% |
| GGTACCTATTTGATGAAACA+AGG | + | chr7_3:67461636-67461655 | None:intergenic | 35.0% | |
| TACCATTTCTTCCTCTTTCT+AGG | - | chr7_3:67461652-67461671 | Msa1118720:intron | 35.0% | |
| TACCTAGAAAGAGGAAGAAA+TGG | + | chr7_3:67461657-67461676 | None:intergenic | 35.0% | |
| ATGTTGATGTCGAATCAATC+AGG | + | chr7_3:67461708-67461727 | None:intergenic | 35.0% | |
| !! | AAAAAGCTAGCTTTCTTTGC+CGG | - | chr7_3:67461952-67461971 | Msa1118720:CDS | 35.0% |
| TAATAGTTGGCAATGATCAC+TGG | + | chr7_3:67462168-67462187 | None:intergenic | 35.0% | |
| ! | CTGAAAGGTATAGTTAGTTC+TGG | - | chr7_3:67462273-67462292 | Msa1118720:CDS | 35.0% |
| AGAAGAATGTGTTGAAGGTA+AGG | - | chr7_3:67462313-67462332 | Msa1118720:CDS | 35.0% | |
| GAAGAATGTGTTGAAGGTAA+GGG | - | chr7_3:67462314-67462333 | Msa1118720:CDS | 35.0% | |
| TAGAATGCATCAAAGTCAAG+TGG | + | chr7_3:67462363-67462382 | None:intergenic | 35.0% | |
| TATGAATCCCCCAAAACAAT+AGG | + | chr7_3:67462426-67462445 | None:intergenic | 35.0% | |
| ! | AAAGGATCATCTTTTCTGTG+AGG | + | chr7_3:67461181-67461200 | None:intergenic | 35.0% |
| GGTAATAGCACATTTGCAAA+AGG | + | chr7_3:67461199-67461218 | None:intergenic | 35.0% | |
| ! | CTTTTTCCATAGCAAGTCTA+CGG | - | chr7_3:67461332-67461351 | Msa1118720:CDS | 35.0% |
| TGATTCACAAGTATCCGTAT+TGG | - | chr7_3:67461416-67461435 | Msa1118720:CDS | 35.0% | |
| TATGTGGCATGTCATTCAAT+TGG | - | chr7_3:67461466-67461485 | Msa1118720:CDS | 35.0% | |
| ! | ATGGCATTGAATTTCACATC+AGG | + | chr7_3:67461514-67461533 | None:intergenic | 35.0% |
| ! | TCTTTTCTTGGCCAAATTTG+TGG | + | chr7_3:67461601-67461620 | None:intergenic | 35.0% |
| !! | TTGGGTGGATTTTCTTTTCT+TGG | + | chr7_3:67461613-67461632 | None:intergenic | 35.0% |
| CCTATTTGATGAAACAAGGT+TGG | + | chr7_3:67461632-67461651 | None:intergenic | 35.0% | |
| ! | CCAACCTTGTTTCATCAAAT+AGG | - | chr7_3:67461629-67461648 | Msa1118720:intron | 35.0% |
| GGTACCTATTTGATGAAACA+AGG | + | chr7_3:67461636-67461655 | None:intergenic | 35.0% | |
| TACCATTTCTTCCTCTTTCT+AGG | - | chr7_3:67461652-67461671 | Msa1118720:intron | 35.0% | |
| TACCTAGAAAGAGGAAGAAA+TGG | + | chr7_3:67461657-67461676 | None:intergenic | 35.0% | |
| ATGTTGATGTCGAATCAATC+AGG | + | chr7_3:67461708-67461727 | None:intergenic | 35.0% | |
| !! | AAAAAGCTAGCTTTCTTTGC+CGG | - | chr7_3:67461952-67461971 | Msa1118720:CDS | 35.0% |
| TAATAGTTGGCAATGATCAC+TGG | + | chr7_3:67462168-67462187 | None:intergenic | 35.0% | |
| ! | CTGAAAGGTATAGTTAGTTC+TGG | - | chr7_3:67462273-67462292 | Msa1118720:CDS | 35.0% |
| AGAAGAATGTGTTGAAGGTA+AGG | - | chr7_3:67462313-67462332 | Msa1118720:CDS | 35.0% | |
| GAAGAATGTGTTGAAGGTAA+GGG | - | chr7_3:67462314-67462333 | Msa1118720:CDS | 35.0% | |
| TAGAATGCATCAAAGTCAAG+TGG | + | chr7_3:67462363-67462382 | None:intergenic | 35.0% | |
| TATGAATCCCCCAAAACAAT+AGG | + | chr7_3:67462426-67462445 | None:intergenic | 35.0% | |
| !! | CGTAGACTTGCTATGGAAAA+AGG | + | chr7_3:67461334-67461353 | None:intergenic | 40.0% |
| TGGCATGTCATTCAATTGGA+AGG | - | chr7_3:67461470-67461489 | Msa1118720:CDS | 40.0% | |
| TTCAATTGGAAGGTCTGCTA+TGG | - | chr7_3:67461480-67461499 | Msa1118720:CDS | 40.0% | |
| ATGCATGCCTACCACAAATT+TGG | - | chr7_3:67461587-67461606 | Msa1118720:CDS | 40.0% | |
| TTCTTGGCCAAATTTGTGGT+AGG | + | chr7_3:67461597-67461616 | None:intergenic | 40.0% | |
| TTTGATGAAACAAGGTTGGG+TGG | + | chr7_3:67461628-67461647 | None:intergenic | 40.0% | |
| ! | TCGAATCAATCAGGTGGATT+AGG | + | chr7_3:67461699-67461718 | None:intergenic | 40.0% |
| TTGATGTCGAATCAATCAGG+TGG | + | chr7_3:67461705-67461724 | None:intergenic | 40.0% | |
| ! | AACTTGACCATCACCACTTT+TGG | - | chr7_3:67461750-67461769 | Msa1118720:intron | 40.0% |
| !! | ACTTGACCATCACCACTTTT+GGG | - | chr7_3:67461751-67461770 | Msa1118720:intron | 40.0% |
| TTTAGACCCAAAAGTGGTGA+TGG | + | chr7_3:67461760-67461779 | None:intergenic | 40.0% | |
| CCAGTACGGATAAATCTTGT+CGG | - | chr7_3:67461988-67462007 | Msa1118720:CDS | 40.0% | |
| CAGTACGGATAAATCTTGTC+GGG | - | chr7_3:67461989-67462008 | Msa1118720:CDS | 40.0% | |
| GGAAGGCTAAAAACACCATA+CGG | - | chr7_3:67462048-67462067 | Msa1118720:CDS | 40.0% | |
| CCTAATAACTCATCACCGTA+TGG | + | chr7_3:67462066-67462085 | None:intergenic | 40.0% | |
| CCATACGGTGATGAGTTATT+AGG | - | chr7_3:67462063-67462082 | Msa1118720:CDS | 40.0% | |
| GCTACAGAAGAATGTGTTGA+AGG | - | chr7_3:67462308-67462327 | Msa1118720:CDS | 40.0% | |
| !!! | AGGTAAGGGAGCATTTTCAA+TGG | - | chr7_3:67462328-67462347 | Msa1118720:CDS | 40.0% |
| AATGCATCAAAGTCAAGTGG+AGG | + | chr7_3:67462360-67462379 | None:intergenic | 40.0% | |
| !! | CGTAGACTTGCTATGGAAAA+AGG | + | chr7_3:67461334-67461353 | None:intergenic | 40.0% |
| TGGCATGTCATTCAATTGGA+AGG | - | chr7_3:67461470-67461489 | Msa1118720:CDS | 40.0% | |
| TTCAATTGGAAGGTCTGCTA+TGG | - | chr7_3:67461480-67461499 | Msa1118720:CDS | 40.0% | |
| ATGCATGCCTACCACAAATT+TGG | - | chr7_3:67461587-67461606 | Msa1118720:CDS | 40.0% | |
| TTCTTGGCCAAATTTGTGGT+AGG | + | chr7_3:67461597-67461616 | None:intergenic | 40.0% | |
| TTTGATGAAACAAGGTTGGG+TGG | + | chr7_3:67461628-67461647 | None:intergenic | 40.0% | |
| ! | TCGAATCAATCAGGTGGATT+AGG | + | chr7_3:67461699-67461718 | None:intergenic | 40.0% |
| TTGATGTCGAATCAATCAGG+TGG | + | chr7_3:67461705-67461724 | None:intergenic | 40.0% | |
| ! | AACTTGACCATCACCACTTT+TGG | - | chr7_3:67461750-67461769 | Msa1118720:intron | 40.0% |
| !! | ACTTGACCATCACCACTTTT+GGG | - | chr7_3:67461751-67461770 | Msa1118720:intron | 40.0% |
| TTTAGACCCAAAAGTGGTGA+TGG | + | chr7_3:67461760-67461779 | None:intergenic | 40.0% | |
| CCAGTACGGATAAATCTTGT+CGG | - | chr7_3:67461988-67462007 | Msa1118720:CDS | 40.0% | |
| CAGTACGGATAAATCTTGTC+GGG | - | chr7_3:67461989-67462008 | Msa1118720:CDS | 40.0% | |
| GGAAGGCTAAAAACACCATA+CGG | - | chr7_3:67462048-67462067 | Msa1118720:CDS | 40.0% | |
| CCTAATAACTCATCACCGTA+TGG | + | chr7_3:67462066-67462085 | None:intergenic | 40.0% | |
| CCATACGGTGATGAGTTATT+AGG | - | chr7_3:67462063-67462082 | Msa1118720:CDS | 40.0% | |
| GCTACAGAAGAATGTGTTGA+AGG | - | chr7_3:67462308-67462327 | Msa1118720:CDS | 40.0% | |
| !!! | AGGTAAGGGAGCATTTTCAA+TGG | - | chr7_3:67462328-67462347 | Msa1118720:CDS | 40.0% |
| AATGCATCAAAGTCAAGTGG+AGG | + | chr7_3:67462360-67462379 | None:intergenic | 40.0% | |
| TTACCCGTGAAAACTGAACC+CGG | - | chr7_3:67461214-67461233 | Msa1118720:CDS | 45.0% | |
| TTCACTGGCATAATTGCCAC+CGG | + | chr7_3:67461236-67461255 | None:intergenic | 45.0% | |
| !! | ATCATGCCGTAGACTTGCTA+TGG | + | chr7_3:67461341-67461360 | None:intergenic | 45.0% |
| TACTGGCGAATTCACTTCTC+CGG | + | chr7_3:67461974-67461993 | None:intergenic | 45.0% | |
| GAGAAGTGAATTCGCCAGTA+CGG | - | chr7_3:67461974-67461993 | Msa1118720:CDS | 45.0% | |
| CCGACAAGATTTATCCGTAC+TGG | + | chr7_3:67461991-67462010 | None:intergenic | 45.0% | |
| GGATAAATCTTGTCGGGACA+TGG | - | chr7_3:67461995-67462014 | Msa1118720:CDS | 45.0% | |
| GAAGTGAACACAGCACGTAT+TGG | - | chr7_3:67462117-67462136 | Msa1118720:CDS | 45.0% | |
| TTACCCGTGAAAACTGAACC+CGG | - | chr7_3:67461214-67461233 | Msa1118720:CDS | 45.0% | |
| TTCACTGGCATAATTGCCAC+CGG | + | chr7_3:67461236-67461255 | None:intergenic | 45.0% | |
| !! | ATCATGCCGTAGACTTGCTA+TGG | + | chr7_3:67461341-67461360 | None:intergenic | 45.0% |
| TACTGGCGAATTCACTTCTC+CGG | + | chr7_3:67461974-67461993 | None:intergenic | 45.0% | |
| GAGAAGTGAATTCGCCAGTA+CGG | - | chr7_3:67461974-67461993 | Msa1118720:CDS | 45.0% | |
| CCGACAAGATTTATCCGTAC+TGG | + | chr7_3:67461991-67462010 | None:intergenic | 45.0% | |
| GGATAAATCTTGTCGGGACA+TGG | - | chr7_3:67461995-67462014 | Msa1118720:CDS | 45.0% | |
| GAAGTGAACACAGCACGTAT+TGG | - | chr7_3:67462117-67462136 | Msa1118720:CDS | 45.0% | |
| TCACTGGCATAATTGCCACC+GGG | + | chr7_3:67461235-67461254 | None:intergenic | 50.0% | |
| !! | CATGATCGTCGAGTTGGTGT+GGG | - | chr7_3:67461355-67461374 | Msa1118720:CDS | 50.0% |
| TATCCGTATTGGAACCGCAC+CGG | - | chr7_3:67461427-67461446 | Msa1118720:CDS | 50.0% | |
| ATAAAAGTGATCCGCGCCAC+CGG | + | chr7_3:67461449-67461468 | None:intergenic | 50.0% | |
| !! | TGGCGCGGATCACTTTTATG+TGG | - | chr7_3:67461450-67461469 | Msa1118720:CDS | 50.0% |
| TCACTGGCATAATTGCCACC+GGG | + | chr7_3:67461235-67461254 | None:intergenic | 50.0% | |
| !! | CATGATCGTCGAGTTGGTGT+GGG | - | chr7_3:67461355-67461374 | Msa1118720:CDS | 50.0% |
| TATCCGTATTGGAACCGCAC+CGG | - | chr7_3:67461427-67461446 | Msa1118720:CDS | 50.0% | |
| ATAAAAGTGATCCGCGCCAC+CGG | + | chr7_3:67461449-67461468 | None:intergenic | 50.0% | |
| !! | TGGCGCGGATCACTTTTATG+TGG | - | chr7_3:67461450-67461469 | Msa1118720:CDS | 50.0% |
| ! | CCACCGGGTTCAGTTTTCAC+GGG | + | chr7_3:67461220-67461239 | None:intergenic | 55.0% |
| ! | GCCACCGGGTTCAGTTTTCA+CGG | + | chr7_3:67461221-67461240 | None:intergenic | 55.0% |
| CTACGGCATGATCGTCGAGT+TGG | - | chr7_3:67461349-67461368 | Msa1118720:CDS | 55.0% | |
| !! | GCATGATCGTCGAGTTGGTG+TGG | - | chr7_3:67461354-67461373 | Msa1118720:CDS | 55.0% |
| ! | CCACCGGGTTCAGTTTTCAC+GGG | + | chr7_3:67461220-67461239 | None:intergenic | 55.0% |
| ! | GCCACCGGGTTCAGTTTTCA+CGG | + | chr7_3:67461221-67461240 | None:intergenic | 55.0% |
| CTACGGCATGATCGTCGAGT+TGG | - | chr7_3:67461349-67461368 | Msa1118720:CDS | 55.0% | |
| !! | GCATGATCGTCGAGTTGGTG+TGG | - | chr7_3:67461354-67461373 | Msa1118720:CDS | 55.0% |
| CCCGTGAAAACTGAACCCGG+TGG | - | chr7_3:67461217-67461236 | Msa1118720:CDS | 60.0% | |
| !! | GATCGTCGAGTTGGTGTGGG+AGG | - | chr7_3:67461358-67461377 | Msa1118720:CDS | 60.0% |
| CCACCGGTGCGGTTCCAATA+CGG | + | chr7_3:67461433-67461452 | None:intergenic | 60.0% | |
| CCCGTGAAAACTGAACCCGG+TGG | - | chr7_3:67461217-67461236 | Msa1118720:CDS | 60.0% | |
| !! | GATCGTCGAGTTGGTGTGGG+AGG | - | chr7_3:67461358-67461377 | Msa1118720:CDS | 60.0% |
| CCACCGGTGCGGTTCCAATA+CGG | + | chr7_3:67461433-67461452 | None:intergenic | 60.0% | |
| CCGTATTGGAACCGCACCGG+TGG | - | chr7_3:67461430-67461449 | Msa1118720:CDS | 65.0% | |
| CCGTATTGGAACCGCACCGG+TGG | - | chr7_3:67461430-67461449 | Msa1118720:CDS | 65.0% | |
| ! | TTGGAACCGCACCGGTGGCG+CGG | - | chr7_3:67461435-67461454 | Msa1118720:CDS | 70.0% |
| AGTGATCCGCGCCACCGGTG+CGG | + | chr7_3:67461444-67461463 | None:intergenic | 70.0% | |
| ! | TTGGAACCGCACCGGTGGCG+CGG | - | chr7_3:67461435-67461454 | Msa1118720:CDS | 70.0% |
| AGTGATCCGCGCCACCGGTG+CGG | + | chr7_3:67461444-67461463 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 67461148 | 67462446 | 67461148 | ID=Msa1118720;Name=Msa1118720 |
| chr7_3 | mRNA | 67461148 | 67462446 | 67461148 | ID=Msa1118720-mRNA-1;Parent=Msa1118720;Name=Msa1118720-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|1|1|2|0|332 |
| chr7_3 | exon | 67461944 | 67462446 | 67461944 | ID=Msa1118720-mRNA-1:exon:16605;Parent=Msa1118720-mRNA-1 |
| chr7_3 | exon | 67461148 | 67461643 | 67461148 | ID=Msa1118720-mRNA-1:exon:16604;Parent=Msa1118720-mRNA-1 |
| chr7_3 | CDS | 67461944 | 67462446 | 67461944 | ID=Msa1118720-mRNA-1:cds;Parent=Msa1118720-mRNA-1 |
| chr7_3 | CDS | 67461148 | 67461643 | 67461148 | ID=Msa1118720-mRNA-1:cds;Parent=Msa1118720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
