AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1264210


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1264210 MtrunA17_Chr4g0074251 96.422 531 18 1 1 531 1 530 0.0 1058
Msa1264210 MtrunA17_Chr4g0074231 96.234 531 19 1 1 531 1 530 0.0 1055
Msa1264210 MtrunA17_Chr4g0074211 86.337 344 10 1 188 531 18 324 0.0 600
Msa1264210 MtrunA17_Chr4g0074221 95.062 162 7 1 1 162 1 161 5.18e-106 314
Msa1264210 MtrunA17_Chr5g0432281 24.401 459 253 11 52 477 54 451 6.03e-26 111
Msa1264210 MtrunA17_Chr5g0432271 30.968 155 93 4 33 175 36 188 9.33e-15 76.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1264210 AT1G20370.1 56.886 501 181 7 16 502 12 491 0.0 561
Msa1264210 AT1G76120.1 58.898 472 157 8 32 501 1 437 0.0 548
Msa1264210 AT1G76120.2 56.266 391 134 8 32 420 1 356 6.27e-143 416
Msa1264210 AT2G30320.1 37.143 140 76 3 52 179 60 199 5.36e-19 90.5

Find 144 sgRNAs with CRISPR-Local

Find 346 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGAAGCTTTGTATGTTTC+TGG 0.086550 8_2:+67595635 Msa1264210:CDS
CTTACCCTCGTTGTCATTAA+TGG 0.129147 8_2:-67596179 None:intergenic
CCCCTTTCGTGTCTATTATT+TGG 0.170580 8_2:+67597213 Msa1264210:three_prime_UTR
CATGGGTATCTTTCCACTTC+TGG 0.173591 8_2:-67596823 None:intergenic
GATTCTGAAATGAGGGTTTA+AGG 0.211617 8_2:+67595007 Msa1264210:five_prime_UTR
TGCTGTTGGTCAGGTTGTTT+CGG 0.216572 8_2:+67595736 Msa1264210:CDS
GCTGTTGGTCAGGTTGTTTC+GGG 0.226417 8_2:+67595737 Msa1264210:CDS
TTCTTATCGCTTATAAATAA+TGG 0.237433 8_2:+67595364 Msa1264210:exon
TTACTGCGGTGTTGGTTATC+AGG 0.256135 8_2:+67595568 Msa1264210:CDS
GTGAGGGAAGGTTTGAATTA+AGG 0.305638 8_2:-67595796 None:intergenic
GGTAGACATCTTAACCTTCT+TGG 0.314194 8_2:-67595462 None:intergenic
CCCTCACAGATACGAATCTT+TGG 0.317752 8_2:+67595812 Msa1264210:CDS
TATTGCTTCCACAGAATATA+AGG 0.337574 8_2:+67596913 Msa1264210:CDS
CTAGCTATCGTTTAGGTTTG+TGG 0.340592 8_2:+67595334 Msa1264210:intron
CTTTCATTGACACCTCTTCA+TGG 0.363909 8_2:-67596841 None:intergenic
GAGACTGTATTGGCTAGTTT+AGG 0.366065 8_2:+67595944 Msa1264210:CDS
GAAAGTCCACGATCCTGTTC+AGG 0.366757 8_2:-67595665 None:intergenic
GCAGATCTGGATAGTTTCTA+TGG 0.367344 8_2:-67596970 None:intergenic
CAACCGAATGAAACTTTCTT+CGG 0.370904 8_2:+67597074 Msa1264210:exon
TAAAACTGTGGTTTCTGATC+AGG 0.376101 8_2:+67596225 Msa1264210:CDS
ATCGTTTAGGTTTGTGGCAT+CGG 0.387114 8_2:+67595340 Msa1264210:intron
GGTGGATCTGAGAATAATTT+AGG 0.393164 8_2:+67596268 Msa1264210:CDS
CCGTCAAGGATGCGCAGATC+TGG 0.394239 8_2:-67596983 None:intergenic
TTAGAATTTACTTCTTCAAC+TGG 0.399023 8_2:-67596205 None:intergenic
TTCTTTGCTTACTGCGGTGT+TGG 0.404138 8_2:+67595560 Msa1264210:CDS
AGGAAGGAACTGTTGGTCTA+TGG 0.410886 8_2:+67596933 Msa1264210:CDS
AGGAGTTAGTGCTGTTGGTC+AGG 0.420318 8_2:+67595727 Msa1264210:CDS
CGGTCAGCTAGAACTGATAA+AGG 0.424782 8_2:+67595707 Msa1264210:CDS
CCAGATCTGCGCATCCTTGA+CGG 0.424998 8_2:+67596983 Msa1264210:CDS
TTCTGGAGCTGTACCTGAAC+AGG 0.432347 8_2:+67595652 Msa1264210:CDS
GACTTTCTAAACGCTATGAC+TGG 0.432785 8_2:+67595681 Msa1264210:CDS
ACCAAATAATAGACACGAAA+GGG 0.438656 8_2:-67597214 None:intergenic
CAGATCTGCGCATCCTTGAC+GGG 0.449223 8_2:+67596984 Msa1264210:CDS
CCTTCAATAGTCTTTGCACC+AGG 0.460741 8_2:-67595605 None:intergenic
TTACTTCATATAACCAGAAG+TGG 0.464262 8_2:+67596810 Msa1264210:CDS
TTCAGTAGCCGCTGAAGAGC+CGG 0.467878 8_2:+67595436 Msa1264210:CDS
TCTTGCGTCTGATCTACTTC+CGG 0.470110 8_2:+67595047 Msa1264210:five_prime_UTR
TACAACTGCTGAAGGAAGTA+AGG 0.470835 8_2:+67595508 Msa1264210:CDS
CCTGGTGCAAAGACTATTGA+AGG 0.472541 8_2:+67595605 Msa1264210:CDS
AAAGCTGAAATTGACATGAA+TGG 0.476162 8_2:+67597028 Msa1264210:CDS
AACCGAATGAAACTTTCTTC+GGG 0.477650 8_2:+67597075 Msa1264210:exon
GATACGGCTGCCAATGGAAG+TGG 0.482571 8_2:+67596322 Msa1264210:CDS
GTGCCTACTGCACCCGAGGT+TGG 0.486292 8_2:+67596764 Msa1264210:CDS
AATGAAAGCATATGAGAAAG+AGG 0.488811 8_2:+67596856 Msa1264210:CDS
TACTGCGGTGTTGGTTATCA+GGG 0.489262 8_2:+67595569 Msa1264210:CDS
TCATCAGATACGGAAGATGA+TGG 0.493754 8_2:+67596555 Msa1264210:CDS
CATTAATGACAACGAGGGTA+AGG 0.495640 8_2:+67596180 Msa1264210:CDS
CAAAGAAAATCGCTACCTTA+CGG 0.496906 8_2:-67595544 None:intergenic
ATTTGTGAAGTGTGAGATTG+TGG 0.497348 8_2:+67596516 Msa1264210:CDS
GGCCCGAAGAAAGTTTCATT+CGG 0.497684 8_2:-67597077 None:intergenic
ATCTTAACCTTCTTGGCCAC+CGG 0.498713 8_2:-67595455 None:intergenic
GAGAGGAAGAAAAGTGGAAG+GGG 0.504504 8_2:+67596006 Msa1264210:CDS
CATCAGATACGGAAGATGAT+GGG 0.507228 8_2:+67596556 Msa1264210:CDS
AGAAAAGTGGAAGGGGTGGT+TGG 0.512312 8_2:+67596013 Msa1264210:CDS
TTGGTTGAGACACTAGGAAA+GGG 0.513190 8_2:+67597232 Msa1264210:three_prime_UTR
CACTGTTGTAGTTGAGGGCA+TGG 0.514451 8_2:+67596492 Msa1264210:CDS
AAAAGTGAACGGAGAGGATA+CGG 0.517227 8_2:+67596306 Msa1264210:CDS
CTAAACGCTATGACTGGGCT+CGG 0.517397 8_2:+67595687 Msa1264210:CDS
AGCACCACTGTTGTAGTTGA+GGG 0.518752 8_2:+67596487 Msa1264210:CDS
ATCTAAATATAATCCAACCT+CGG 0.518807 8_2:-67596777 None:intergenic
TGAAGAGCCGGTGGCCAAGA+AGG 0.518853 8_2:+67595448 Msa1264210:CDS
CGATTCTATATTGATCCACC+TGG 0.519143 8_2:+67595761 Msa1264210:CDS
TATTATTTGGTTGAGACACT+AGG 0.521419 8_2:+67597226 Msa1264210:three_prime_UTR
AGGAAGAAAAGTGGAAGGGG+TGG 0.523374 8_2:+67596009 Msa1264210:CDS
TCTAAATATAATCCAACCTC+GGG 0.523459 8_2:-67596776 None:intergenic
GAGAGAGGAAGAAAAGTGGA+AGG 0.524603 8_2:+67596004 Msa1264210:CDS
TTCTGAGAGAGGAAGAAAAG+TGG 0.528778 8_2:+67596000 Msa1264210:CDS
GTTGAGGTTTCTTTAAGCAA+AGG 0.530209 8_2:+67596130 Msa1264210:CDS
TATTCTGTGGAAGCAATATG+AGG 0.533607 8_2:-67596908 None:intergenic
AGCATATGAGAAAGAGGCTG+AGG 0.533806 8_2:+67596862 Msa1264210:CDS
AGAGAGGAAGAAAAGTGGAA+GGG 0.535330 8_2:+67596005 Msa1264210:CDS
AGAATGAGTTCTACGATGAC+CGG 0.536800 8_2:-67597098 None:intergenic
CACTGTGCCTACTGCACCCG+AGG 0.538197 8_2:+67596760 Msa1264210:CDS
TTTCATTGACACCTCTTCAT+GGG 0.538326 8_2:-67596840 None:intergenic
AGAAGTAAATTCTAAAACTG+TGG 0.542353 8_2:+67596213 Msa1264210:CDS
CAGGTGGATCAATATAGAAT+CGG 0.544533 8_2:-67595760 None:intergenic
GATAAAGGAGTTAGTGCTGT+TGG 0.545304 8_2:+67595722 Msa1264210:CDS
AGTTCCTTCCTTATATTCTG+TGG 0.546489 8_2:-67596921 None:intergenic
GCTTCATGCTTCATCAGATA+CGG 0.547048 8_2:+67596545 Msa1264210:CDS
CCAAAGATTCGTATCTGTGA+GGG 0.547978 8_2:-67595812 None:intergenic
TTAAGGCGATCAACGAAGCC+AGG 0.552578 8_2:-67595779 None:intergenic
ATAACAAAACCCACTTCCAT+TGG 0.552929 8_2:-67596332 None:intergenic
GAATATAAGGAAGGAACTGT+TGG 0.554434 8_2:+67596926 Msa1264210:CDS
TTGTTATGGTGAGAAGGAGA+GGG 0.555405 8_2:+67596348 Msa1264210:CDS
GAGACACTAGGAAAGGGAAA+TGG 0.555541 8_2:+67597238 Msa1264210:three_prime_UTR
AAGCACCACTGTTGTAGTTG+AGG 0.555686 8_2:+67596486 Msa1264210:CDS
TGGAGTTACAAAGGATGTTG+AGG 0.558784 8_2:+67596114 Msa1264210:CDS
TTTCTTCCTCTCTCAGAACA+TGG 0.560829 8_2:-67595995 None:intergenic
CATCATAAACAATTATATGC+AGG 0.561146 8_2:+67597184 Msa1264210:three_prime_UTR
AATCCAACCTCGGGTGCAGT+AGG 0.564016 8_2:-67596767 None:intergenic
CTGCGCATCCTTGACGGGGA+AGG 0.565379 8_2:+67596989 Msa1264210:CDS
ACCACTACTTCTGATGATGA+AGG 0.569745 8_2:+67595482 Msa1264210:CDS
GCTACTGAAAGTAACGGCGC+TGG 0.570669 8_2:-67595422 None:intergenic
GATGAGGTTGCTGCTACAAA+TGG 0.573318 8_2:+67596247 Msa1264210:CDS
TCCTTCATCATCAGAAGTAG+TGG 0.575739 8_2:-67595483 None:intergenic
TAACATGTCTGAAATGTCAA+AGG 0.575874 8_2:-67597141 None:intergenic
GGAGAGGATACGGCTGCCAA+TGG 0.576386 8_2:+67596316 Msa1264210:CDS
CGTGCGTGATTCTGAAATGA+GGG 0.577471 8_2:+67595000 Msa1264210:five_prime_UTR
TTTGGTTGAGACACTAGGAA+AGG 0.579600 8_2:+67597231 Msa1264210:three_prime_UTR
CAATCTTGAGCTAGAAGCTG+TGG 0.587584 8_2:+67596048 Msa1264210:CDS
GAATGAAACTTTCTTCGGGC+CGG 0.594208 8_2:+67597079 Msa1264210:exon
ATGTCTGAAATGTCAAAGGA+AGG 0.594809 8_2:-67597137 None:intergenic
CTTGGCCACCGGCTCTTCAG+CGG 0.594829 8_2:-67595444 None:intergenic
TCGCGATAGAGAGACTGTAT+TGG 0.594900 8_2:+67595934 Msa1264210:CDS
TTTGTTATGGTGAGAAGGAG+AGG 0.595584 8_2:+67596347 Msa1264210:CDS
TCGTGCGTGATTCTGAAATG+AGG 0.599849 8_2:+67594999 Msa1264210:five_prime_UTR
GCTGGAGATGATGAAGTTGA+CGG 0.600440 8_2:-67595404 None:intergenic
GCTTTCTCGATAAGTGACTC+AGG 0.601494 8_2:-67596610 None:intergenic
ATCAGATACGGAAGATGATG+GGG 0.604058 8_2:+67596557 Msa1264210:CDS
TCGTGACACCTTCCCCGTCA+AGG 0.607550 8_2:-67596997 None:intergenic
CTTCAATAGTCTTTGCACCA+GGG 0.608022 8_2:-67595604 None:intergenic
AACCAAATAATAGACACGAA+AGG 0.608678 8_2:-67597215 None:intergenic
GGTAAGATACAAGCGCCGTA+AGG 0.609527 8_2:+67595529 Msa1264210:CDS
TCTCTATCGCGATGACAACA+TGG 0.610304 8_2:-67595923 None:intergenic
GAAGATGATGGGGCTTGCCG+TGG 0.611519 8_2:+67596567 Msa1264210:CDS
TTTGTGAAGTGTGAGATTGT+GGG 0.614643 8_2:+67596517 Msa1264210:CDS
GAGGTTGCTGCTACAAATGG+TGG 0.614830 8_2:+67596250 Msa1264210:CDS
ACTTTCTAAACGCTATGACT+GGG 0.615231 8_2:+67595682 Msa1264210:CDS
ACAATTTCTCATAATTGCCA+CGG 0.619993 8_2:-67596584 None:intergenic
GAAGCTGTGGATGTTGAGAA+TGG 0.622497 8_2:+67596061 Msa1264210:CDS
AGATCAGACGCAAGAGACAA+TGG 0.623847 8_2:-67595039 None:intergenic
GTGGAAAGATACCCATGAAG+AGG 0.624853 8_2:+67596829 Msa1264210:CDS
TGTTTGCCATGTTCTGAGAG+AGG 0.628824 8_2:+67595989 Msa1264210:CDS
TGTGGTTTCTGATCAGGATG+AGG 0.630641 8_2:+67596231 Msa1264210:CDS
AGTAGCCGCTGAAGAGCCGG+TGG 0.636551 8_2:+67595439 Msa1264210:CDS
GCTTCCACAGAATATAAGGA+AGG 0.637022 8_2:+67596917 Msa1264210:CDS
CATGCCCTCAACTACAACAG+TGG 0.639893 8_2:-67596491 None:intergenic
GAAGGATGTACAACTGCTGA+AGG 0.641304 8_2:+67595500 Msa1264210:CDS
GCTGTACCTGAACAGGATCG+TGG 0.643569 8_2:+67595659 Msa1264210:CDS
ACCAAAGATTCGTATCTGTG+AGG 0.646180 8_2:-67595813 None:intergenic
CCAAATAATAGACACGAAAG+GGG 0.652521 8_2:-67597213 None:intergenic
AGATCTGCGCATCCTTGACG+GGG 0.657312 8_2:+67596985 Msa1264210:CDS
ATACGGCTGCCAATGGAAGT+GGG 0.658422 8_2:+67596323 Msa1264210:CDS
AGATTCGTATCTGTGAGGGA+AGG 0.664361 8_2:-67595808 None:intergenic
AAACAATTATATGCAGGACA+TGG 0.667034 8_2:+67597190 Msa1264210:three_prime_UTR
GAATCCATTAATGACAACGA+GGG 0.669982 8_2:+67596175 Msa1264210:CDS
GAATAATTTAGGCATTCTCG+AGG 0.670398 8_2:+67596279 Msa1264210:CDS
CACGACCAAAATAAAACCCG+AGG 0.673397 8_2:+67596426 Msa1264210:CDS
CAGACGCAAGAGACAATGGT+CGG 0.682629 8_2:-67595035 None:intergenic
AGGCGATCAACGAAGCCAGG+TGG 0.685026 8_2:-67595776 None:intergenic
TCAGCGGCTACTGAAAGTAA+CGG 0.694289 8_2:-67595428 None:intergenic
GGTTGACTCTGGAGTTACAA+AGG 0.706513 8_2:+67596105 Msa1264210:CDS
CATGGATCAAGAGCAAACAC+AGG 0.714774 8_2:-67595905 None:intergenic
AGAATCCATTAATGACAACG+AGG 0.722782 8_2:+67596174 Msa1264210:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTGATATATAAATTAAGAG+AGG - chr8_2:67595206-67595225 None:intergenic 15.0%
!!! CTAAGAATGATATATATTTT+TGG - chr8_2:67595236-67595255 None:intergenic 15.0%
!! CATTATTTCAAATATAAAGT+TGG - chr8_2:67596676-67596695 None:intergenic 15.0%
!! TTTGATATATAAATTAAGAG+AGG - chr8_2:67595206-67595225 None:intergenic 15.0%
!!! CTAAGAATGATATATATTTT+TGG - chr8_2:67595236-67595255 None:intergenic 15.0%
!! CATTATTTCAAATATAAAGT+TGG - chr8_2:67596676-67596695 None:intergenic 15.0%
!!! TATATCATTCTTAGCTTTTA+TGG + chr8_2:67595242-67595261 Msa1264210:intron 20.0%
!! TTCTTATCGCTTATAAATAA+TGG + chr8_2:67595364-67595383 Msa1264210:exon 20.0%
!!! AATATTTTGAAGTGTTATGT+TGG + chr8_2:67596382-67596401 Msa1264210:CDS 20.0%
!!! ATATTTTGAAGTGTTATGTT+GGG + chr8_2:67596383-67596402 Msa1264210:CDS 20.0%
!!! TATATCATTCTTAGCTTTTA+TGG + chr8_2:67595242-67595261 Msa1264210:intron 20.0%
!! TTCTTATCGCTTATAAATAA+TGG + chr8_2:67595364-67595383 Msa1264210:exon 20.0%
!!! AATATTTTGAAGTGTTATGT+TGG + chr8_2:67596382-67596401 Msa1264210:CDS 20.0%
!!! ATATTTTGAAGTGTTATGTT+GGG + chr8_2:67596383-67596402 Msa1264210:CDS 20.0%
! AATATATCTAGCTATCGTTT+AGG + chr8_2:67595327-67595346 Msa1264210:intron 25.0%
! TTCATCAAACAAAAATGATG+TGG + chr8_2:67596084-67596103 Msa1264210:CDS 25.0%
! TTAGAATTTACTTCTTCAAC+TGG - chr8_2:67596208-67596227 None:intergenic 25.0%
!!! AGAAGTAAATTCTAAAACTG+TGG + chr8_2:67596213-67596232 Msa1264210:CDS 25.0%
! ATCTAAATATAATCCAACCT+CGG - chr8_2:67596780-67596799 None:intergenic 25.0%
! CATCATAAACAATTATATGC+AGG + chr8_2:67597184-67597203 Msa1264210:three_prime_UTR 25.0%
! AATATATCTAGCTATCGTTT+AGG + chr8_2:67595327-67595346 Msa1264210:intron 25.0%
! TTCATCAAACAAAAATGATG+TGG + chr8_2:67596084-67596103 Msa1264210:CDS 25.0%
! TTAGAATTTACTTCTTCAAC+TGG - chr8_2:67596208-67596227 None:intergenic 25.0%
!!! AGAAGTAAATTCTAAAACTG+TGG + chr8_2:67596213-67596232 Msa1264210:CDS 25.0%
! ATCTAAATATAATCCAACCT+CGG - chr8_2:67596780-67596799 None:intergenic 25.0%
! CATCATAAACAATTATATGC+AGG + chr8_2:67597184-67597203 Msa1264210:three_prime_UTR 25.0%
!! TTCTTAGCTTTTATGGTACT+AGG + chr8_2:67595249-67595268 Msa1264210:intron 30.0%
!! TCTTAGCTTTTATGGTACTA+GGG + chr8_2:67595250-67595269 Msa1264210:intron 30.0%
!!! TTATTTTGGTCGTGAAGTTA+TGG - chr8_2:67596420-67596439 None:intergenic 30.0%
! ATAATGAAACGTTTTGCAGA+AGG - chr8_2:67596454-67596473 None:intergenic 30.0%
ACAATTTCTCATAATTGCCA+CGG - chr8_2:67596587-67596606 None:intergenic 30.0%
TCTAAATATAATCCAACCTC+GGG - chr8_2:67596779-67596798 None:intergenic 30.0%
TTACTTCATATAACCAGAAG+TGG + chr8_2:67596810-67596829 Msa1264210:CDS 30.0%
! AATGAAAGCATATGAGAAAG+AGG + chr8_2:67596856-67596875 Msa1264210:CDS 30.0%
TATTGCTTCCACAGAATATA+AGG + chr8_2:67596913-67596932 Msa1264210:CDS 30.0%
AAAGCTGAAATTGACATGAA+TGG + chr8_2:67597028-67597047 Msa1264210:CDS 30.0%
! TAACATGTCTGAAATGTCAA+AGG - chr8_2:67597144-67597163 None:intergenic 30.0%
AAACAATTATATGCAGGACA+TGG + chr8_2:67597190-67597209 Msa1264210:three_prime_UTR 30.0%
ACCAAATAATAGACACGAAA+GGG - chr8_2:67597217-67597236 None:intergenic 30.0%
AACCAAATAATAGACACGAA+AGG - chr8_2:67597218-67597237 None:intergenic 30.0%
TATTATTTGGTTGAGACACT+AGG + chr8_2:67597226-67597245 Msa1264210:three_prime_UTR 30.0%
!! TTCTTAGCTTTTATGGTACT+AGG + chr8_2:67595249-67595268 Msa1264210:intron 30.0%
!! TCTTAGCTTTTATGGTACTA+GGG + chr8_2:67595250-67595269 Msa1264210:intron 30.0%
!!! TTATTTTGGTCGTGAAGTTA+TGG - chr8_2:67596420-67596439 None:intergenic 30.0%
! ATAATGAAACGTTTTGCAGA+AGG - chr8_2:67596454-67596473 None:intergenic 30.0%
ACAATTTCTCATAATTGCCA+CGG - chr8_2:67596587-67596606 None:intergenic 30.0%
TCTAAATATAATCCAACCTC+GGG - chr8_2:67596779-67596798 None:intergenic 30.0%
TTACTTCATATAACCAGAAG+TGG + chr8_2:67596810-67596829 Msa1264210:CDS 30.0%
! AATGAAAGCATATGAGAAAG+AGG + chr8_2:67596856-67596875 Msa1264210:CDS 30.0%
TATTGCTTCCACAGAATATA+AGG + chr8_2:67596913-67596932 Msa1264210:CDS 30.0%
AAAGCTGAAATTGACATGAA+TGG + chr8_2:67597028-67597047 Msa1264210:CDS 30.0%
! TAACATGTCTGAAATGTCAA+AGG - chr8_2:67597144-67597163 None:intergenic 30.0%
AAACAATTATATGCAGGACA+TGG + chr8_2:67597190-67597209 Msa1264210:three_prime_UTR 30.0%
ACCAAATAATAGACACGAAA+GGG - chr8_2:67597217-67597236 None:intergenic 30.0%
AACCAAATAATAGACACGAA+AGG - chr8_2:67597218-67597237 None:intergenic 30.0%
TATTATTTGGTTGAGACACT+AGG + chr8_2:67597226-67597245 Msa1264210:three_prime_UTR 30.0%
!! GATTCTGAAATGAGGGTTTA+AGG + chr8_2:67595007-67595026 Msa1264210:five_prime_UTR 35.0%
! CAGAAGAGTATGTGTATTAC+CGG - chr8_2:67595069-67595088 None:intergenic 35.0%
AAGAATCTGTAGCGTTACTT+AGG + chr8_2:67595285-67595304 Msa1264210:intron 35.0%
CAAAGAAAATCGCTACCTTA+CGG - chr8_2:67595547-67595566 None:intergenic 35.0%
! GAAGAAGCTTTGTATGTTTC+TGG + chr8_2:67595635-67595654 Msa1264210:CDS 35.0%
ACTTTCTAAACGCTATGACT+GGG + chr8_2:67595682-67595701 Msa1264210:CDS 35.0%
CAGGTGGATCAATATAGAAT+CGG - chr8_2:67595763-67595782 None:intergenic 35.0%
!! CTAAGAAGTTTTGTGATCGT+AGG + chr8_2:67595864-67595883 Msa1264210:CDS 35.0%
! AAAAATGATGTGGTTGACTC+TGG + chr8_2:67596094-67596113 Msa1264210:CDS 35.0%
GTTGAGGTTTCTTTAAGCAA+AGG + chr8_2:67596130-67596149 Msa1264210:CDS 35.0%
AGAATCCATTAATGACAACG+AGG + chr8_2:67596174-67596193 Msa1264210:CDS 35.0%
GAATCCATTAATGACAACGA+GGG + chr8_2:67596175-67596194 Msa1264210:CDS 35.0%
TAAAACTGTGGTTTCTGATC+AGG + chr8_2:67596225-67596244 Msa1264210:CDS 35.0%
GGTGGATCTGAGAATAATTT+AGG + chr8_2:67596268-67596287 Msa1264210:CDS 35.0%
GAATAATTTAGGCATTCTCG+AGG + chr8_2:67596279-67596298 Msa1264210:CDS 35.0%
ATAACAAAACCCACTTCCAT+TGG - chr8_2:67596335-67596354 None:intergenic 35.0%
!!! AATGGAAGTGGGTTTTGTTA+TGG + chr8_2:67596334-67596353 Msa1264210:CDS 35.0%
ATTTGTGAAGTGTGAGATTG+TGG + chr8_2:67596516-67596535 Msa1264210:CDS 35.0%
TTTGTGAAGTGTGAGATTGT+GGG + chr8_2:67596517-67596536 Msa1264210:CDS 35.0%
ATTGTTTCGTCCAAAATGCA+GGG + chr8_2:67596727-67596746 Msa1264210:intron 35.0%
TTTCATTGACACCTCTTCAT+GGG - chr8_2:67596843-67596862 None:intergenic 35.0%
TATTCTGTGGAAGCAATATG+AGG - chr8_2:67596911-67596930 None:intergenic 35.0%
AGTTCCTTCCTTATATTCTG+TGG - chr8_2:67596924-67596943 None:intergenic 35.0%
GAATATAAGGAAGGAACTGT+TGG + chr8_2:67596926-67596945 Msa1264210:CDS 35.0%
CAACCGAATGAAACTTTCTT+CGG + chr8_2:67597074-67597093 Msa1264210:exon 35.0%
AACCGAATGAAACTTTCTTC+GGG + chr8_2:67597075-67597094 Msa1264210:exon 35.0%
! ATGTCTGAAATGTCAAAGGA+AGG - chr8_2:67597140-67597159 None:intergenic 35.0%
CCAAATAATAGACACGAAAG+GGG - chr8_2:67597216-67597235 None:intergenic 35.0%
!! GATTCTGAAATGAGGGTTTA+AGG + chr8_2:67595007-67595026 Msa1264210:five_prime_UTR 35.0%
! CAGAAGAGTATGTGTATTAC+CGG - chr8_2:67595069-67595088 None:intergenic 35.0%
AAGAATCTGTAGCGTTACTT+AGG + chr8_2:67595285-67595304 Msa1264210:intron 35.0%
CAAAGAAAATCGCTACCTTA+CGG - chr8_2:67595547-67595566 None:intergenic 35.0%
! GAAGAAGCTTTGTATGTTTC+TGG + chr8_2:67595635-67595654 Msa1264210:CDS 35.0%
ACTTTCTAAACGCTATGACT+GGG + chr8_2:67595682-67595701 Msa1264210:CDS 35.0%
CAGGTGGATCAATATAGAAT+CGG - chr8_2:67595763-67595782 None:intergenic 35.0%
!! CTAAGAAGTTTTGTGATCGT+AGG + chr8_2:67595864-67595883 Msa1264210:CDS 35.0%
! AAAAATGATGTGGTTGACTC+TGG + chr8_2:67596094-67596113 Msa1264210:CDS 35.0%
GTTGAGGTTTCTTTAAGCAA+AGG + chr8_2:67596130-67596149 Msa1264210:CDS 35.0%
AGAATCCATTAATGACAACG+AGG + chr8_2:67596174-67596193 Msa1264210:CDS 35.0%
GAATCCATTAATGACAACGA+GGG + chr8_2:67596175-67596194 Msa1264210:CDS 35.0%
TAAAACTGTGGTTTCTGATC+AGG + chr8_2:67596225-67596244 Msa1264210:CDS 35.0%
GGTGGATCTGAGAATAATTT+AGG + chr8_2:67596268-67596287 Msa1264210:CDS 35.0%
GAATAATTTAGGCATTCTCG+AGG + chr8_2:67596279-67596298 Msa1264210:CDS 35.0%
ATAACAAAACCCACTTCCAT+TGG - chr8_2:67596335-67596354 None:intergenic 35.0%
!!! AATGGAAGTGGGTTTTGTTA+TGG + chr8_2:67596334-67596353 Msa1264210:CDS 35.0%
ATTTGTGAAGTGTGAGATTG+TGG + chr8_2:67596516-67596535 Msa1264210:CDS 35.0%
TTTGTGAAGTGTGAGATTGT+GGG + chr8_2:67596517-67596536 Msa1264210:CDS 35.0%
ATTGTTTCGTCCAAAATGCA+GGG + chr8_2:67596727-67596746 Msa1264210:intron 35.0%
TTTCATTGACACCTCTTCAT+GGG - chr8_2:67596843-67596862 None:intergenic 35.0%
TATTCTGTGGAAGCAATATG+AGG - chr8_2:67596911-67596930 None:intergenic 35.0%
AGTTCCTTCCTTATATTCTG+TGG - chr8_2:67596924-67596943 None:intergenic 35.0%
GAATATAAGGAAGGAACTGT+TGG + chr8_2:67596926-67596945 Msa1264210:CDS 35.0%
CAACCGAATGAAACTTTCTT+CGG + chr8_2:67597074-67597093 Msa1264210:exon 35.0%
AACCGAATGAAACTTTCTTC+GGG + chr8_2:67597075-67597094 Msa1264210:exon 35.0%
! ATGTCTGAAATGTCAAAGGA+AGG - chr8_2:67597140-67597159 None:intergenic 35.0%
CCAAATAATAGACACGAAAG+GGG - chr8_2:67597216-67597235 None:intergenic 35.0%
! CTAGCTATCGTTTAGGTTTG+TGG + chr8_2:67595334-67595353 Msa1264210:intron 40.0%
! ATCGTTTAGGTTTGTGGCAT+CGG + chr8_2:67595340-67595359 Msa1264210:intron 40.0%
GGTAGACATCTTAACCTTCT+TGG - chr8_2:67595465-67595484 None:intergenic 40.0%
! ACCACTACTTCTGATGATGA+AGG + chr8_2:67595482-67595501 Msa1264210:CDS 40.0%
TCCTTCATCATCAGAAGTAG+TGG - chr8_2:67595486-67595505 None:intergenic 40.0%
TACAACTGCTGAAGGAAGTA+AGG + chr8_2:67595508-67595527 Msa1264210:CDS 40.0%
! GCGATTTTCTTTGCTTACTG+CGG + chr8_2:67595554-67595573 Msa1264210:CDS 40.0%
CTTCAATAGTCTTTGCACCA+GGG - chr8_2:67595607-67595626 None:intergenic 40.0%
GACTTTCTAAACGCTATGAC+TGG + chr8_2:67595681-67595700 Msa1264210:CDS 40.0%
GATAAAGGAGTTAGTGCTGT+TGG + chr8_2:67595722-67595741 Msa1264210:CDS 40.0%
CGATTCTATATTGATCCACC+TGG + chr8_2:67595761-67595780 Msa1264210:CDS 40.0%
GTGAGGGAAGGTTTGAATTA+AGG - chr8_2:67595799-67595818 None:intergenic 40.0%
CCAAAGATTCGTATCTGTGA+GGG - chr8_2:67595815-67595834 None:intergenic 40.0%
ACCAAAGATTCGTATCTGTG+AGG - chr8_2:67595816-67595835 None:intergenic 40.0%
!! AGAAGTTTTGTGATCGTAGG+AGG + chr8_2:67595867-67595886 Msa1264210:CDS 40.0%
!! GAGACTGTATTGGCTAGTTT+AGG + chr8_2:67595944-67595963 Msa1264210:CDS 40.0%
TTTCTTCCTCTCTCAGAACA+TGG - chr8_2:67595998-67596017 None:intergenic 40.0%
! TTCTGAGAGAGGAAGAAAAG+TGG + chr8_2:67596000-67596019 Msa1264210:CDS 40.0%
AGAGAGGAAGAAAAGTGGAA+GGG + chr8_2:67596005-67596024 Msa1264210:CDS 40.0%
TGGAGTTACAAAGGATGTTG+AGG + chr8_2:67596114-67596133 Msa1264210:CDS 40.0%
CTTACCCTCGTTGTCATTAA+TGG - chr8_2:67596182-67596201 None:intergenic 40.0%
CATTAATGACAACGAGGGTA+AGG + chr8_2:67596180-67596199 Msa1264210:CDS 40.0%
CTCGAGGAAGAAAAAGTGAA+CGG + chr8_2:67596295-67596314 Msa1264210:CDS 40.0%
AAAAGTGAACGGAGAGGATA+CGG + chr8_2:67596306-67596325 Msa1264210:CDS 40.0%
!!! TGGGTTTTGTTATGGTGAGA+AGG + chr8_2:67596342-67596361 Msa1264210:CDS 40.0%
! TTTGTTATGGTGAGAAGGAG+AGG + chr8_2:67596347-67596366 Msa1264210:CDS 40.0%
TTGTTATGGTGAGAAGGAGA+GGG + chr8_2:67596348-67596367 Msa1264210:CDS 40.0%
!!! AGGATCCTCGGGTTTTATTT+TGG - chr8_2:67596434-67596453 None:intergenic 40.0%
GCTTCATGCTTCATCAGATA+CGG + chr8_2:67596545-67596564 Msa1264210:CDS 40.0%
TCATCAGATACGGAAGATGA+TGG + chr8_2:67596555-67596574 Msa1264210:CDS 40.0%
CATCAGATACGGAAGATGAT+GGG + chr8_2:67596556-67596575 Msa1264210:CDS 40.0%
ATCAGATACGGAAGATGATG+GGG + chr8_2:67596557-67596576 Msa1264210:CDS 40.0%
GATTGTTTCGTCCAAAATGC+AGG + chr8_2:67596726-67596745 Msa1264210:intron 40.0%
! ATGCTAACATCCCTGCATTT+TGG - chr8_2:67596740-67596759 None:intergenic 40.0%
CTTTCATTGACACCTCTTCA+TGG - chr8_2:67596844-67596863 None:intergenic 40.0%
GCTTCCACAGAATATAAGGA+AGG + chr8_2:67596917-67596936 Msa1264210:CDS 40.0%
GCAGATCTGGATAGTTTCTA+TGG - chr8_2:67596973-67596992 None:intergenic 40.0%
AGAATGAGTTCTACGATGAC+CGG - chr8_2:67597101-67597120 None:intergenic 40.0%
CCCCTTTCGTGTCTATTATT+TGG + chr8_2:67597213-67597232 Msa1264210:three_prime_UTR 40.0%
TTTGGTTGAGACACTAGGAA+AGG + chr8_2:67597231-67597250 Msa1264210:three_prime_UTR 40.0%
TTGGTTGAGACACTAGGAAA+GGG + chr8_2:67597232-67597251 Msa1264210:three_prime_UTR 40.0%
! CTAGCTATCGTTTAGGTTTG+TGG + chr8_2:67595334-67595353 Msa1264210:intron 40.0%
! ATCGTTTAGGTTTGTGGCAT+CGG + chr8_2:67595340-67595359 Msa1264210:intron 40.0%
GGTAGACATCTTAACCTTCT+TGG - chr8_2:67595465-67595484 None:intergenic 40.0%
! ACCACTACTTCTGATGATGA+AGG + chr8_2:67595482-67595501 Msa1264210:CDS 40.0%
TCCTTCATCATCAGAAGTAG+TGG - chr8_2:67595486-67595505 None:intergenic 40.0%
TACAACTGCTGAAGGAAGTA+AGG + chr8_2:67595508-67595527 Msa1264210:CDS 40.0%
! GCGATTTTCTTTGCTTACTG+CGG + chr8_2:67595554-67595573 Msa1264210:CDS 40.0%
CTTCAATAGTCTTTGCACCA+GGG - chr8_2:67595607-67595626 None:intergenic 40.0%
GACTTTCTAAACGCTATGAC+TGG + chr8_2:67595681-67595700 Msa1264210:CDS 40.0%
GATAAAGGAGTTAGTGCTGT+TGG + chr8_2:67595722-67595741 Msa1264210:CDS 40.0%
CGATTCTATATTGATCCACC+TGG + chr8_2:67595761-67595780 Msa1264210:CDS 40.0%
GTGAGGGAAGGTTTGAATTA+AGG - chr8_2:67595799-67595818 None:intergenic 40.0%
CCAAAGATTCGTATCTGTGA+GGG - chr8_2:67595815-67595834 None:intergenic 40.0%
ACCAAAGATTCGTATCTGTG+AGG - chr8_2:67595816-67595835 None:intergenic 40.0%
!! AGAAGTTTTGTGATCGTAGG+AGG + chr8_2:67595867-67595886 Msa1264210:CDS 40.0%
!! GAGACTGTATTGGCTAGTTT+AGG + chr8_2:67595944-67595963 Msa1264210:CDS 40.0%
TTTCTTCCTCTCTCAGAACA+TGG - chr8_2:67595998-67596017 None:intergenic 40.0%
! TTCTGAGAGAGGAAGAAAAG+TGG + chr8_2:67596000-67596019 Msa1264210:CDS 40.0%
AGAGAGGAAGAAAAGTGGAA+GGG + chr8_2:67596005-67596024 Msa1264210:CDS 40.0%
TGGAGTTACAAAGGATGTTG+AGG + chr8_2:67596114-67596133 Msa1264210:CDS 40.0%
CTTACCCTCGTTGTCATTAA+TGG - chr8_2:67596182-67596201 None:intergenic 40.0%
CATTAATGACAACGAGGGTA+AGG + chr8_2:67596180-67596199 Msa1264210:CDS 40.0%
CTCGAGGAAGAAAAAGTGAA+CGG + chr8_2:67596295-67596314 Msa1264210:CDS 40.0%
AAAAGTGAACGGAGAGGATA+CGG + chr8_2:67596306-67596325 Msa1264210:CDS 40.0%
!!! TGGGTTTTGTTATGGTGAGA+AGG + chr8_2:67596342-67596361 Msa1264210:CDS 40.0%
! TTTGTTATGGTGAGAAGGAG+AGG + chr8_2:67596347-67596366 Msa1264210:CDS 40.0%
TTGTTATGGTGAGAAGGAGA+GGG + chr8_2:67596348-67596367 Msa1264210:CDS 40.0%
!!! AGGATCCTCGGGTTTTATTT+TGG - chr8_2:67596434-67596453 None:intergenic 40.0%
GCTTCATGCTTCATCAGATA+CGG + chr8_2:67596545-67596564 Msa1264210:CDS 40.0%
TCATCAGATACGGAAGATGA+TGG + chr8_2:67596555-67596574 Msa1264210:CDS 40.0%
CATCAGATACGGAAGATGAT+GGG + chr8_2:67596556-67596575 Msa1264210:CDS 40.0%
ATCAGATACGGAAGATGATG+GGG + chr8_2:67596557-67596576 Msa1264210:CDS 40.0%
GATTGTTTCGTCCAAAATGC+AGG + chr8_2:67596726-67596745 Msa1264210:intron 40.0%
! ATGCTAACATCCCTGCATTT+TGG - chr8_2:67596740-67596759 None:intergenic 40.0%
CTTTCATTGACACCTCTTCA+TGG - chr8_2:67596844-67596863 None:intergenic 40.0%
GCTTCCACAGAATATAAGGA+AGG + chr8_2:67596917-67596936 Msa1264210:CDS 40.0%
GCAGATCTGGATAGTTTCTA+TGG - chr8_2:67596973-67596992 None:intergenic 40.0%
AGAATGAGTTCTACGATGAC+CGG - chr8_2:67597101-67597120 None:intergenic 40.0%
CCCCTTTCGTGTCTATTATT+TGG + chr8_2:67597213-67597232 Msa1264210:three_prime_UTR 40.0%
TTTGGTTGAGACACTAGGAA+AGG + chr8_2:67597231-67597250 Msa1264210:three_prime_UTR 40.0%
TTGGTTGAGACACTAGGAAA+GGG + chr8_2:67597232-67597251 Msa1264210:three_prime_UTR 40.0%
!! TCGTGCGTGATTCTGAAATG+AGG + chr8_2:67594999-67595018 Msa1264210:five_prime_UTR 45.0%
!! CGTGCGTGATTCTGAAATGA+GGG + chr8_2:67595000-67595019 Msa1264210:five_prime_UTR 45.0%
AGATCAGACGCAAGAGACAA+TGG - chr8_2:67595042-67595061 None:intergenic 45.0%
TCTTGCGTCTGATCTACTTC+CGG + chr8_2:67595047-67595066 Msa1264210:five_prime_UTR 45.0%
GCTGGAGATGATGAAGTTGA+CGG - chr8_2:67595407-67595426 None:intergenic 45.0%
TCAGCGGCTACTGAAAGTAA+CGG - chr8_2:67595431-67595450 None:intergenic 45.0%
ATCTTAACCTTCTTGGCCAC+CGG - chr8_2:67595458-67595477 None:intergenic 45.0%
GAAGGATGTACAACTGCTGA+AGG + chr8_2:67595500-67595519 Msa1264210:CDS 45.0%
TTCTTTGCTTACTGCGGTGT+TGG + chr8_2:67595560-67595579 Msa1264210:CDS 45.0%
!! TTACTGCGGTGTTGGTTATC+AGG + chr8_2:67595568-67595587 Msa1264210:CDS 45.0%
!! TACTGCGGTGTTGGTTATCA+GGG + chr8_2:67595569-67595588 Msa1264210:CDS 45.0%
CCTTCAATAGTCTTTGCACC+AGG - chr8_2:67595608-67595627 None:intergenic 45.0%
CCTGGTGCAAAGACTATTGA+AGG + chr8_2:67595605-67595624 Msa1264210:CDS 45.0%
CGGTCAGCTAGAACTGATAA+AGG + chr8_2:67595707-67595726 Msa1264210:CDS 45.0%
! TGCTGTTGGTCAGGTTGTTT+CGG + chr8_2:67595736-67595755 Msa1264210:CDS 45.0%
AGATTCGTATCTGTGAGGGA+AGG - chr8_2:67595811-67595830 None:intergenic 45.0%
CCCTCACAGATACGAATCTT+TGG + chr8_2:67595812-67595831 Msa1264210:CDS 45.0%
CATGGATCAAGAGCAAACAC+AGG - chr8_2:67595908-67595927 None:intergenic 45.0%
TCTCTATCGCGATGACAACA+TGG - chr8_2:67595926-67595945 None:intergenic 45.0%
TCGCGATAGAGAGACTGTAT+TGG + chr8_2:67595934-67595953 Msa1264210:CDS 45.0%
!! TGTTTGCCATGTTCTGAGAG+AGG + chr8_2:67595989-67596008 Msa1264210:CDS 45.0%
GAGAGAGGAAGAAAAGTGGA+AGG + chr8_2:67596004-67596023 Msa1264210:CDS 45.0%
GAGAGGAAGAAAAGTGGAAG+GGG + chr8_2:67596006-67596025 Msa1264210:CDS 45.0%
CAATCTTGAGCTAGAAGCTG+TGG + chr8_2:67596048-67596067 Msa1264210:CDS 45.0%
GAAGCTGTGGATGTTGAGAA+TGG + chr8_2:67596061-67596080 Msa1264210:CDS 45.0%
!! GGTTGACTCTGGAGTTACAA+AGG + chr8_2:67596105-67596124 Msa1264210:CDS 45.0%
TGTGGTTTCTGATCAGGATG+AGG + chr8_2:67596231-67596250 Msa1264210:CDS 45.0%
GATGAGGTTGCTGCTACAAA+TGG + chr8_2:67596247-67596266 Msa1264210:CDS 45.0%
GGAAGAAAAAGTGAACGGAG+AGG + chr8_2:67596300-67596319 Msa1264210:CDS 45.0%
CACGACCAAAATAAAACCCG+AGG + chr8_2:67596426-67596445 Msa1264210:CDS 45.0%
! ACGTTTTGCAGAAGGATCCT+CGG - chr8_2:67596446-67596465 None:intergenic 45.0%
AAGCACCACTGTTGTAGTTG+AGG + chr8_2:67596486-67596505 Msa1264210:CDS 45.0%
AGCACCACTGTTGTAGTTGA+GGG + chr8_2:67596487-67596506 Msa1264210:CDS 45.0%
GCTTTCTCGATAAGTGACTC+AGG - chr8_2:67596613-67596632 None:intergenic 45.0%
CATGGGTATCTTTCCACTTC+TGG - chr8_2:67596826-67596845 None:intergenic 45.0%
GTGGAAAGATACCCATGAAG+AGG + chr8_2:67596829-67596848 Msa1264210:CDS 45.0%
AGCATATGAGAAAGAGGCTG+AGG + chr8_2:67596862-67596881 Msa1264210:CDS 45.0%
! AGGAAGGAACTGTTGGTCTA+TGG + chr8_2:67596933-67596952 Msa1264210:CDS 45.0%
GGCCCGAAGAAAGTTTCATT+CGG - chr8_2:67597080-67597099 None:intergenic 45.0%
GAATGAAACTTTCTTCGGGC+CGG + chr8_2:67597079-67597098 Msa1264210:exon 45.0%
GAGACACTAGGAAAGGGAAA+TGG + chr8_2:67597238-67597257 Msa1264210:three_prime_UTR 45.0%
!! TCGTGCGTGATTCTGAAATG+AGG + chr8_2:67594999-67595018 Msa1264210:five_prime_UTR 45.0%
!! CGTGCGTGATTCTGAAATGA+GGG + chr8_2:67595000-67595019 Msa1264210:five_prime_UTR 45.0%
AGATCAGACGCAAGAGACAA+TGG - chr8_2:67595042-67595061 None:intergenic 45.0%
TCTTGCGTCTGATCTACTTC+CGG + chr8_2:67595047-67595066 Msa1264210:five_prime_UTR 45.0%
GCTGGAGATGATGAAGTTGA+CGG - chr8_2:67595407-67595426 None:intergenic 45.0%
TCAGCGGCTACTGAAAGTAA+CGG - chr8_2:67595431-67595450 None:intergenic 45.0%
ATCTTAACCTTCTTGGCCAC+CGG - chr8_2:67595458-67595477 None:intergenic 45.0%
GAAGGATGTACAACTGCTGA+AGG + chr8_2:67595500-67595519 Msa1264210:CDS 45.0%
TTCTTTGCTTACTGCGGTGT+TGG + chr8_2:67595560-67595579 Msa1264210:CDS 45.0%
!! TTACTGCGGTGTTGGTTATC+AGG + chr8_2:67595568-67595587 Msa1264210:CDS 45.0%
!! TACTGCGGTGTTGGTTATCA+GGG + chr8_2:67595569-67595588 Msa1264210:CDS 45.0%
CCTTCAATAGTCTTTGCACC+AGG - chr8_2:67595608-67595627 None:intergenic 45.0%
CCTGGTGCAAAGACTATTGA+AGG + chr8_2:67595605-67595624 Msa1264210:CDS 45.0%
CGGTCAGCTAGAACTGATAA+AGG + chr8_2:67595707-67595726 Msa1264210:CDS 45.0%
! TGCTGTTGGTCAGGTTGTTT+CGG + chr8_2:67595736-67595755 Msa1264210:CDS 45.0%
AGATTCGTATCTGTGAGGGA+AGG - chr8_2:67595811-67595830 None:intergenic 45.0%
CCCTCACAGATACGAATCTT+TGG + chr8_2:67595812-67595831 Msa1264210:CDS 45.0%
CATGGATCAAGAGCAAACAC+AGG - chr8_2:67595908-67595927 None:intergenic 45.0%
TCTCTATCGCGATGACAACA+TGG - chr8_2:67595926-67595945 None:intergenic 45.0%
TCGCGATAGAGAGACTGTAT+TGG + chr8_2:67595934-67595953 Msa1264210:CDS 45.0%
!! TGTTTGCCATGTTCTGAGAG+AGG + chr8_2:67595989-67596008 Msa1264210:CDS 45.0%
GAGAGAGGAAGAAAAGTGGA+AGG + chr8_2:67596004-67596023 Msa1264210:CDS 45.0%
GAGAGGAAGAAAAGTGGAAG+GGG + chr8_2:67596006-67596025 Msa1264210:CDS 45.0%
CAATCTTGAGCTAGAAGCTG+TGG + chr8_2:67596048-67596067 Msa1264210:CDS 45.0%
GAAGCTGTGGATGTTGAGAA+TGG + chr8_2:67596061-67596080 Msa1264210:CDS 45.0%
!! GGTTGACTCTGGAGTTACAA+AGG + chr8_2:67596105-67596124 Msa1264210:CDS 45.0%
TGTGGTTTCTGATCAGGATG+AGG + chr8_2:67596231-67596250 Msa1264210:CDS 45.0%
GATGAGGTTGCTGCTACAAA+TGG + chr8_2:67596247-67596266 Msa1264210:CDS 45.0%
GGAAGAAAAAGTGAACGGAG+AGG + chr8_2:67596300-67596319 Msa1264210:CDS 45.0%
CACGACCAAAATAAAACCCG+AGG + chr8_2:67596426-67596445 Msa1264210:CDS 45.0%
! ACGTTTTGCAGAAGGATCCT+CGG - chr8_2:67596446-67596465 None:intergenic 45.0%
AAGCACCACTGTTGTAGTTG+AGG + chr8_2:67596486-67596505 Msa1264210:CDS 45.0%
AGCACCACTGTTGTAGTTGA+GGG + chr8_2:67596487-67596506 Msa1264210:CDS 45.0%
GCTTTCTCGATAAGTGACTC+AGG - chr8_2:67596613-67596632 None:intergenic 45.0%
CATGGGTATCTTTCCACTTC+TGG - chr8_2:67596826-67596845 None:intergenic 45.0%
GTGGAAAGATACCCATGAAG+AGG + chr8_2:67596829-67596848 Msa1264210:CDS 45.0%
AGCATATGAGAAAGAGGCTG+AGG + chr8_2:67596862-67596881 Msa1264210:CDS 45.0%
! AGGAAGGAACTGTTGGTCTA+TGG + chr8_2:67596933-67596952 Msa1264210:CDS 45.0%
GGCCCGAAGAAAGTTTCATT+CGG - chr8_2:67597080-67597099 None:intergenic 45.0%
GAATGAAACTTTCTTCGGGC+CGG + chr8_2:67597079-67597098 Msa1264210:exon 45.0%
GAGACACTAGGAAAGGGAAA+TGG + chr8_2:67597238-67597257 Msa1264210:three_prime_UTR 45.0%
CAGACGCAAGAGACAATGGT+CGG - chr8_2:67595038-67595057 None:intergenic 50.0%
! GGTAAGATACAAGCGCCGTA+AGG + chr8_2:67595529-67595548 Msa1264210:CDS 50.0%
CAGGGTATGCAGAAAAACCC+TGG + chr8_2:67595587-67595606 Msa1264210:CDS 50.0%
!! TTCTGGAGCTGTACCTGAAC+AGG + chr8_2:67595652-67595671 Msa1264210:CDS 50.0%
GAAAGTCCACGATCCTGTTC+AGG - chr8_2:67595668-67595687 None:intergenic 50.0%
CTAAACGCTATGACTGGGCT+CGG + chr8_2:67595687-67595706 Msa1264210:CDS 50.0%
! AGGAGTTAGTGCTGTTGGTC+AGG + chr8_2:67595727-67595746 Msa1264210:CDS 50.0%
! GCTGTTGGTCAGGTTGTTTC+GGG + chr8_2:67595737-67595756 Msa1264210:CDS 50.0%
TTAAGGCGATCAACGAAGCC+AGG - chr8_2:67595782-67595801 None:intergenic 50.0%
AGGAAGAAAAGTGGAAGGGG+TGG + chr8_2:67596009-67596028 Msa1264210:CDS 50.0%
AGAAAAGTGGAAGGGGTGGT+TGG + chr8_2:67596013-67596032 Msa1264210:CDS 50.0%
GAGGTTGCTGCTACAAATGG+TGG + chr8_2:67596250-67596269 Msa1264210:CDS 50.0%
ATACGGCTGCCAATGGAAGT+GGG + chr8_2:67596323-67596342 Msa1264210:CDS 50.0%
! CGTTTTGCAGAAGGATCCTC+GGG - chr8_2:67596445-67596464 None:intergenic 50.0%
CATGCCCTCAACTACAACAG+TGG - chr8_2:67596494-67596513 None:intergenic 50.0%
CACTGTTGTAGTTGAGGGCA+TGG + chr8_2:67596492-67596511 Msa1264210:CDS 50.0%
CAGACGCAAGAGACAATGGT+CGG - chr8_2:67595038-67595057 None:intergenic 50.0%
! GGTAAGATACAAGCGCCGTA+AGG + chr8_2:67595529-67595548 Msa1264210:CDS 50.0%
CAGGGTATGCAGAAAAACCC+TGG + chr8_2:67595587-67595606 Msa1264210:CDS 50.0%
!! TTCTGGAGCTGTACCTGAAC+AGG + chr8_2:67595652-67595671 Msa1264210:CDS 50.0%
GAAAGTCCACGATCCTGTTC+AGG - chr8_2:67595668-67595687 None:intergenic 50.0%
CTAAACGCTATGACTGGGCT+CGG + chr8_2:67595687-67595706 Msa1264210:CDS 50.0%
! AGGAGTTAGTGCTGTTGGTC+AGG + chr8_2:67595727-67595746 Msa1264210:CDS 50.0%
! GCTGTTGGTCAGGTTGTTTC+GGG + chr8_2:67595737-67595756 Msa1264210:CDS 50.0%
TTAAGGCGATCAACGAAGCC+AGG - chr8_2:67595782-67595801 None:intergenic 50.0%
AGGAAGAAAAGTGGAAGGGG+TGG + chr8_2:67596009-67596028 Msa1264210:CDS 50.0%
AGAAAAGTGGAAGGGGTGGT+TGG + chr8_2:67596013-67596032 Msa1264210:CDS 50.0%
GAGGTTGCTGCTACAAATGG+TGG + chr8_2:67596250-67596269 Msa1264210:CDS 50.0%
ATACGGCTGCCAATGGAAGT+GGG + chr8_2:67596323-67596342 Msa1264210:CDS 50.0%
! CGTTTTGCAGAAGGATCCTC+GGG - chr8_2:67596445-67596464 None:intergenic 50.0%
CATGCCCTCAACTACAACAG+TGG - chr8_2:67596494-67596513 None:intergenic 50.0%
CACTGTTGTAGTTGAGGGCA+TGG + chr8_2:67596492-67596511 Msa1264210:CDS 50.0%
GCTACTGAAAGTAACGGCGC+TGG - chr8_2:67595425-67595444 None:intergenic 55.0%
TTCAGTAGCCGCTGAAGAGC+CGG + chr8_2:67595436-67595455 Msa1264210:CDS 55.0%
GCTGTACCTGAACAGGATCG+TGG + chr8_2:67595659-67595678 Msa1264210:CDS 55.0%
GATACGGCTGCCAATGGAAG+TGG + chr8_2:67596322-67596341 Msa1264210:CDS 55.0%
AATCCAACCTCGGGTGCAGT+AGG - chr8_2:67596770-67596789 None:intergenic 55.0%
CCAGATCTGCGCATCCTTGA+CGG + chr8_2:67596983-67597002 Msa1264210:CDS 55.0%
CAGATCTGCGCATCCTTGAC+GGG + chr8_2:67596984-67597003 Msa1264210:CDS 55.0%
AGATCTGCGCATCCTTGACG+GGG + chr8_2:67596985-67597004 Msa1264210:CDS 55.0%
GCTACTGAAAGTAACGGCGC+TGG - chr8_2:67595425-67595444 None:intergenic 55.0%
TTCAGTAGCCGCTGAAGAGC+CGG + chr8_2:67595436-67595455 Msa1264210:CDS 55.0%
GCTGTACCTGAACAGGATCG+TGG + chr8_2:67595659-67595678 Msa1264210:CDS 55.0%
GATACGGCTGCCAATGGAAG+TGG + chr8_2:67596322-67596341 Msa1264210:CDS 55.0%
AATCCAACCTCGGGTGCAGT+AGG - chr8_2:67596770-67596789 None:intergenic 55.0%
CCAGATCTGCGCATCCTTGA+CGG + chr8_2:67596983-67597002 Msa1264210:CDS 55.0%
CAGATCTGCGCATCCTTGAC+GGG + chr8_2:67596984-67597003 Msa1264210:CDS 55.0%
AGATCTGCGCATCCTTGACG+GGG + chr8_2:67596985-67597004 Msa1264210:CDS 55.0%
TGAAGAGCCGGTGGCCAAGA+AGG + chr8_2:67595448-67595467 Msa1264210:CDS 60.0%
AGGCGATCAACGAAGCCAGG+TGG - chr8_2:67595779-67595798 None:intergenic 60.0%
GGAGAGGATACGGCTGCCAA+TGG + chr8_2:67596316-67596335 Msa1264210:CDS 60.0%
!! GAAGATGATGGGGCTTGCCG+TGG + chr8_2:67596567-67596586 Msa1264210:CDS 60.0%
CCGTCAAGGATGCGCAGATC+TGG - chr8_2:67596986-67597005 None:intergenic 60.0%
TCGTGACACCTTCCCCGTCA+AGG - chr8_2:67597000-67597019 None:intergenic 60.0%
TGAAGAGCCGGTGGCCAAGA+AGG + chr8_2:67595448-67595467 Msa1264210:CDS 60.0%
AGGCGATCAACGAAGCCAGG+TGG - chr8_2:67595779-67595798 None:intergenic 60.0%
GGAGAGGATACGGCTGCCAA+TGG + chr8_2:67596316-67596335 Msa1264210:CDS 60.0%
!! GAAGATGATGGGGCTTGCCG+TGG + chr8_2:67596567-67596586 Msa1264210:CDS 60.0%
CCGTCAAGGATGCGCAGATC+TGG - chr8_2:67596986-67597005 None:intergenic 60.0%
TCGTGACACCTTCCCCGTCA+AGG - chr8_2:67597000-67597019 None:intergenic 60.0%
AGTAGCCGCTGAAGAGCCGG+TGG + chr8_2:67595439-67595458 Msa1264210:CDS 65.0%
!! CTTGGCCACCGGCTCTTCAG+CGG - chr8_2:67595447-67595466 None:intergenic 65.0%
CACTGTGCCTACTGCACCCG+AGG + chr8_2:67596760-67596779 Msa1264210:CDS 65.0%
GTGCCTACTGCACCCGAGGT+TGG + chr8_2:67596764-67596783 Msa1264210:CDS 65.0%
CTGCGCATCCTTGACGGGGA+AGG + chr8_2:67596989-67597008 Msa1264210:CDS 65.0%
AGTAGCCGCTGAAGAGCCGG+TGG + chr8_2:67595439-67595458 Msa1264210:CDS 65.0%
!! CTTGGCCACCGGCTCTTCAG+CGG - chr8_2:67595447-67595466 None:intergenic 65.0%
CACTGTGCCTACTGCACCCG+AGG + chr8_2:67596760-67596779 Msa1264210:CDS 65.0%
GTGCCTACTGCACCCGAGGT+TGG + chr8_2:67596764-67596783 Msa1264210:CDS 65.0%
CTGCGCATCCTTGACGGGGA+AGG + chr8_2:67596989-67597008 Msa1264210:CDS 65.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 67594996 67597280 67594996 ID=Msa1264210;Name=Msa1264210
chr8_2 mRNA 67594996 67597280 67594996 ID=Msa1264210-mRNA-1;Parent=Msa1264210;Name=Msa1264210-mRNA-1;_AED=0.01;_eAED=0.01;_QI=107|1|1|1|0.5|0.33|3|196|531
chr8_2 exon 67594996 67595068 67594996 ID=Msa1264210-mRNA-1:exon:22276;Parent=Msa1264210-mRNA-1
chr8_2 exon 67595349 67596641 67595349 ID=Msa1264210-mRNA-1:exon:22277;Parent=Msa1264210-mRNA-1
chr8_2 exon 67596748 67597280 67596748 ID=Msa1264210-mRNA-1:exon:22278;Parent=Msa1264210-mRNA-1
chr8_2 five_prime_UTR 67594996 67595068 67594996 ID=Msa1264210-mRNA-1:five_prime_utr;Parent=Msa1264210-mRNA-1
chr8_2 five_prime_UTR 67595349 67595382 67595349 ID=Msa1264210-mRNA-1:five_prime_utr;Parent=Msa1264210-mRNA-1
chr8_2 CDS 67595383 67596641 67595383 ID=Msa1264210-mRNA-1:cds;Parent=Msa1264210-mRNA-1
chr8_2 CDS 67596748 67597084 67596748 ID=Msa1264210-mRNA-1:cds;Parent=Msa1264210-mRNA-1
chr8_2 three_prime_UTR 67597085 67597280 67597085 ID=Msa1264210-mRNA-1:three_prime_utr;Parent=Msa1264210-mRNA-1
Gene Sequence

>Msa1264210

ATGGAAAACTCAGATAAAACTCCGTCAACTTCATCATCTCCAGCGCCGTTACTTTCAGTAGCCGCTGAAGAGCCGGTGGCCAAGAAGGTTAAGATGTCTACCACTACTTCTGATGATGAAGGATGTACAACTGCTGAAGGAAGTAAGGTAAGATACAAGCGCCGTAAGGTAGCGATTTTCTTTGCTTACTGCGGTGTTGGTTATCAGGGTATGCAGAAAAACCCTGGTGCAAAGACTATTGAAGGTGAACTAGAAGAAGCTTTGTATGTTTCTGGAGCTGTACCTGAACAGGATCGTGGACTTTCTAAACGCTATGACTGGGCTCGGTCAGCTAGAACTGATAAAGGAGTTAGTGCTGTTGGTCAGGTTGTTTCGGGCCGATTCTATATTGATCCACCTGGCTTCGTTGATCGCCTTAATTCAAACCTTCCCTCACAGATACGAATCTTTGGTTTTAAGCGAGTGACTGCTTCTTTTAGTGCTAAGAAGTTTTGTGATCGTAGGAGGTATGTTTATCTCATTCCTGTGTTTGCTCTTGATCCATGTTGTCATCGCGATAGAGAGACTGTATTGGCTAGTTTAGGTTCTGAAAATGAGCTTGCTAAGTGTTTGCCATGTTCTGAGAGAGGAAGAAAAGTGGAAGGGGTGGTTGGTAATAGTAAGCGCAATCTTGAGCTAGAAGCTGTGGATGTTGAGAATGGTTCATCAAACAAAAATGATGTGGTTGACTCTGGAGTTACAAAGGATGTTGAGGTTTCTTTAAGCAAAGGTGATGCTAATCATTTAAATAAAGAATCCATTAATGACAACGAGGGTAAGGTTCCAGTTGAAGAAGTAAATTCTAAAACTGTGGTTTCTGATCAGGATGAGGTTGCTGCTACAAATGGTGGATCTGAGAATAATTTAGGCATTCTCGAGGAAGAAAAAGTGAACGGAGAGGATACGGCTGCCAATGGAAGTGGGTTTTGTTATGGTGAGAAGGAGAGGGACAGATTTAACAATATTTTGAAGTGTTATGTTGGGACTCATAACTTCCATAACTTCACGACCAAAATAAAACCCGAGGATCCTTCTGCAAAACGTTTCATTATTTCATTTGACGCAAGCACCACTGTTGTAGTTGAGGGCATGGAATTTGTGAAGTGTGAGATTGTGGGACAGAGCTTCATGCTTCATCAGATACGGAAGATGATGGGGCTTGCCGTGGCAATTATGAGAAATTGTGCACCTGAGTCACTTATCGAGAAAGCTTTGCAGAAGGATGTTAGCATCACTGTGCCTACTGCACCCGAGGTTGGATTATATTTAGATGAGTGCTTCTTTACTTCATATAACCAGAAGTGGAAAGATACCCATGAAGAGGTGTCAATGAAAGCATATGAGAAAGAGGCTGAGGATTTCAAAATGCAGTACATATATCCTCATATTGCTTCCACAGAATATAAGGAAGGAACTGTTGGTCTATGGTTGCATTCTTTGAACCATAGAAACTATCCAGATCTGCGCATCCTTGACGGGGAAGGTGTCACGAATGACAAGAAAGCTGAAATTGACATGAATGGCAAGAAAACTGAAATTGAAGTTGCAACCGAATGA

Protein sequence

>Msa1264210

MENSDKTPSTSSSPAPLLSVAAEEPVAKKVKMSTTTSDDEGCTTAEGSKVRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGELEEALYVSGAVPEQDRGLSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSNLPSQIRIFGFKRVTASFSAKKFCDRRRYVYLIPVFALDPCCHRDRETVLASLGSENELAKCLPCSERGRKVEGVVGNSKRNLELEAVDVENGSSNKNDVVDSGVTKDVEVSLSKGDANHLNKESINDNEGKVPVEEVNSKTVVSDQDEVAATNGGSENNLGILEEEKVNGEDTAANGSGFCYGEKERDRFNNILKCYVGTHNFHNFTTKIKPEDPSAKRFIISFDASTTVVVEGMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVSITVPTAPEVGLYLDECFFTSYNQKWKDTHEEVSMKAYEKEAEDFKMQYIYPHIASTEYKEGTVGLWLHSLNHRNYPDLRILDGEGVTNDKKAEIDMNGKKTEIEVATE*