AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0833190

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0833190 MtrunA17_Chr5g0398471 90.534 412 25 4 1 405 1 405 0.0 669
Msa0833190 MtrunA17_Chr5g0398471 72.391 297 61 2 407 682 102 398 3.63e-143 426
Msa0833190 MtrunA17_Chr5g0398481 90.728 302 7 2 402 682 93 394 8.81e-180 519
Msa0833190 MtrunA17_Chr5g0398481 68.059 407 101 8 6 405 17 401 6.86e-175 506
Msa0833190 MtrunA17_Chr7g0234581 39.867 301 165 6 119 414 97 386 1.00e-53 191
Msa0833190 MtrunA17_Chr7g0234581 39.711 277 137 6 422 676 97 365 3.91e-45 167
Msa0833190 MtrunA17_Chr4g0062901 35.789 285 174 4 113 397 97 372 1.01e-48 176
Msa0833190 MtrunA17_Chr4g0062901 29.021 286 173 5 416 681 97 372 4.51e-33 132
Msa0833190 MtrunA17_Chr2g0314491 34.386 285 175 5 123 405 99 373 7.05e-40 151
Msa0833190 MtrunA17_Chr2g0314491 29.861 288 172 6 415 681 87 365 5.42e-30 122
Msa0833190 MtrunA17_Chr2g0314561 29.459 370 239 9 48 405 3 362 2.91e-37 144
Msa0833190 MtrunA17_Chr2g0314561 30.072 276 164 5 426 681 88 354 6.05e-29 119
Msa0833190 MtrunA17_Chr2g0316711 82.258 62 11 0 148 209 3 64 2.58e-26 102
Msa0833190 MtrunA17_Chr2g0316711 64.516 62 22 0 451 512 3 64 2.74e-18 79.3
Msa0833190 MtrunA17_Chr2g0316691 78.571 56 11 1 459 514 1 55 3.32e-22 90.9
Msa0833190 MtrunA17_Chr2g0316691 69.643 56 16 1 156 211 1 55 5.51e-18 79.0
Msa0833190 MtrunA17_Chr2g0316661 75.000 56 13 1 459 514 1 55 1.29e-20 86.3
Msa0833190 MtrunA17_Chr2g0316661 66.071 56 18 1 156 211 1 55 2.28e-16 73.9
Msa0833190 MtrunA17_Chr2g0316701 78.431 51 10 1 296 346 29 78 1.79e-17 77.8
Msa0833190 MtrunA17_Chr2g0316701 66.667 42 14 0 587 628 29 70 1.38e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0833190 AT4G22840.1 61.517 356 127 5 58 405 33 386 1.85e-143 426
Msa0833190 AT4G22840.1 57.321 321 111 3 413 707 89 409 3.02e-117 358
Msa0833190 AT4G12030.2 56.168 381 157 4 49 420 25 404 4.07e-136 407
Msa0833190 AT4G12030.2 56.187 299 110 2 405 682 82 380 7.24e-110 339
Msa0833190 AT4G12030.4 62.300 313 114 2 112 420 1 313 3.54e-133 396
Msa0833190 AT4G12030.4 57.093 289 103 2 415 682 1 289 2.33e-109 335
Msa0833190 AT4G12030.1 63.333 270 95 2 155 420 1 270 5.32e-114 345
Msa0833190 AT4G12030.1 57.317 246 84 2 458 682 1 246 3.18e-90 283
Msa0833190 AT4G12030.5 63.333 270 95 2 155 420 1 270 5.32e-114 345
Msa0833190 AT4G12030.5 57.317 246 84 2 458 682 1 246 3.18e-90 283
Msa0833190 AT4G12030.3 63.333 270 95 2 155 420 1 270 5.32e-114 345
Msa0833190 AT4G12030.3 57.317 246 84 2 458 682 1 246 3.18e-90 283
Msa0833190 AT3G25410.1 39.928 278 156 5 119 393 112 381 1.38e-52 188
Msa0833190 AT3G25410.1 38.811 286 145 6 422 685 112 389 4.29e-46 170
Msa0833190 AT2G26900.1 33.333 357 211 9 43 397 40 371 5.86e-50 180
Msa0833190 AT2G26900.1 30.070 286 170 5 416 681 96 371 1.92e-34 136
Msa0833190 AT1G78560.1 30.319 376 231 9 33 405 29 376 4.12e-38 147
Msa0833190 AT1G78560.1 26.923 338 211 9 368 681 43 368 1.20e-26 113

Find 156 sgRNAs with CRISPR-Local

Find 502 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGCTTAATGGTGCCATTTC+TGG 0.049187 5_4:-6351762 None:intergenic
GTGCCGTTTGGTTTGATTTC+TGG 0.064589 5_4:+6349374 Msa0833190:five_prime_UTR
GAAATTGCCACCGGTTATTT+TGG 0.187409 5_4:+6351401 Msa0833190:CDS
CATTTGTCATCTTTCGTATC+TGG 0.253548 5_4:+6356369 Msa0833190:CDS
CTAATATTTGTAACGCTATT+CGG 0.265425 5_4:+6356223 Msa0833190:CDS
ATAATATCAGGAAATTTATT+TGG 0.265893 5_4:+6355722 Msa0833190:CDS
AGATACTTTGCACCTGCATT+AGG 0.277137 5_4:+6351308 Msa0833190:intron
TTTGTTGTGAAGCCTCTTCT+TGG 0.285277 5_4:+6351428 Msa0833190:CDS
CTCTTATTGCTGTTGCTCAT+TGG 0.303192 5_4:+6351831 Msa0833190:CDS
TGCTTAATGGTGCCATTTCT+GGG 0.316909 5_4:-6351761 None:intergenic
AGACTTCCTATCGATGTAAA+AGG 0.325939 5_4:+6356041 Msa0833190:CDS
GTGCTTGTTCCTATCACATT+TGG 0.327264 5_4:+6356089 Msa0833190:CDS
TCTTATTGCTGTTGCTCATT+GGG 0.328607 5_4:+6351832 Msa0833190:CDS
ACTTCATTGAGGCATTTAAT+AGG 0.332847 5_4:+6351372 Msa0833190:CDS
TATCTTCTTTGCATAATATC+AGG 0.336822 5_4:+6355710 Msa0833190:CDS
TTTGTGGTGAAGCCTCTTCT+TGG 0.340759 5_4:+6355686 Msa0833190:CDS
ATAAGCTGCATACTAATATT+AGG 0.341587 5_4:-6349584 None:intergenic
GATGTCATAACTATGCTTAA+TGG 0.342890 5_4:-6355957 None:intergenic
CGAATAGCGTTACAAATATT+AGG 0.343902 5_4:-6356222 None:intergenic
AACTTGGCAGCTGAAGAAAT+TGG 0.354490 5_4:+6357205 Msa0833190:CDS
GGGTATGCCTCCTGCAATTT+CGG 0.354537 5_4:+6352434 Msa0833190:CDS
GCCTCCACTCTCTGTGTTGA+CGG 0.357086 5_4:+6352081 Msa0833190:CDS
GTCTCCGCTTATGTCTTTGA+TGG 0.359741 5_4:+6357137 Msa0833190:intron
TTTGGTCTACCAACAGGAAT+AGG 0.363194 5_4:+6351482 Msa0833190:CDS
TGGGAATTTACCGAAATTGC+AGG 0.366222 5_4:-6352444 None:intergenic
GATGTCATTACTATGCTTAA+TGG 0.367163 5_4:-6351774 None:intergenic
ACTTCCTTGAGGCATTTAAC+AGG 0.375791 5_4:+6355630 Msa0833190:CDS
GTATTGGTGGCTTGTGTTAG+TGG 0.378566 5_4:+6351702 Msa0833190:CDS
GTATCTGGTTATATTCTTAG+TGG 0.383721 5_4:+6356384 Msa0833190:CDS
GAGACGGAAGATTGATGATT+GGG 0.383822 5_4:-6349489 None:intergenic
CTCTGTAGTGGCTTCACATC+AGG 0.384857 5_4:-6356426 None:intergenic
CGAATAGCATTGCAAATAGA+AGG 0.386081 5_4:-6352049 None:intergenic
CGTTGTAGTGGCTTTACATC+AGG 0.390378 5_4:-6352253 None:intergenic
GTATTGCTGGCTTGTGTTAG+TGG 0.394186 5_4:+6355885 Msa0833190:CDS
TTTGGTCTACCATCAGCAAT+AGG 0.399441 5_4:+6355740 Msa0833190:CDS
GAATGATTCGGTGTCGGGTC+GGG 0.403998 5_4:-6349759 None:intergenic
CATTTGGTCTACTTCTAAAT+CGG 0.404279 5_4:+6356105 Msa0833190:CDS
GATACTTTGCACCTGCATTA+GGG 0.410007 5_4:+6351309 Msa0833190:intron
AACAAACTGGCCAAAATAAC+CGG 0.410009 5_4:-6351411 None:intergenic
AGACTGCCTATAGATGTAAA+AGG 0.415361 5_4:+6351858 Msa0833190:CDS
AGTGTACTAGCAACGATTGC+AGG 0.421902 5_4:-6350391 None:intergenic
AGCACATTTCAGAGGAAGTC+TGG 0.422299 5_4:-6349703 None:intergenic
TGGAGTTAATTCAAGTGAAA+AGG 0.427672 5_4:+6355607 Msa0833190:CDS
GAGAAGAATGATTCGGTGTC+GGG 0.431370 5_4:-6349764 None:intergenic
TTCTTTGAAGATCCCGTTGT+CGG 0.434911 5_4:+6356601 Msa0833190:CDS
AGGCGCAGGAATTGTATTGC+TGG 0.440884 5_4:+6355872 Msa0833190:intron
ATGCTTAATGGTGCCATTTG+TGG 0.441060 5_4:-6355945 None:intergenic
AGCTTATGTTGGTCAGTTTG+TGG 0.449656 5_4:+6355670 Msa0833190:CDS
TTTGCCTCCACTATCAGTAT+TGG 0.451666 5_4:+6356251 Msa0833190:CDS
AGAAGTAGACCAAATGTGAT+AGG 0.455467 5_4:-6356098 None:intergenic
TTCTTTGAAGATCCAGTTGT+GGG 0.455510 5_4:+6352414 Msa0833190:CDS
GCAGGAGGCATACCCACAAC+TGG 0.468143 5_4:-6352426 None:intergenic
CGAACAATTTCCTTTGAGAC+AGG 0.468727 5_4:+6352274 Msa0833190:CDS
AAAGGAAGTCCCGTGCCGTT+TGG 0.469316 5_4:+6349362 Msa0833190:five_prime_UTR
CTGTTGGCCTGCTTCTAAAT+CGG 0.471373 5_4:+6351922 Msa0833190:CDS
GGAGACGGAAGATTGATGAT+TGG 0.476384 5_4:-6349490 None:intergenic
CATTAGCGTCGTACAGTGGT+GGG 0.481741 5_4:-6349789 None:intergenic
TTGGTTGCAGCTCTCTCTGC+AGG 0.481902 5_4:+6356270 Msa0833190:CDS
CATTTCTCACCTATTCCTGT+TGG 0.482415 5_4:-6351491 None:intergenic
TGGGGTCAATTCAAGTGAAA+AGG 0.486568 5_4:+6351349 Msa0833190:CDS
AAGGAAATTGTTCGTTGTAG+TGG 0.486811 5_4:-6352265 None:intergenic
AGTTCTACCGATTTAGAAGC+AGG 0.487761 5_4:-6351929 None:intergenic
GCAGAAGGCATACCGACAAC+GGG 0.488370 5_4:-6356613 None:intergenic
TGTTGTTGCAGTTGCAGTAT+CGG 0.490620 5_4:-6349511 None:intergenic
GAAGAGGCTTCACAACAAAC+TGG 0.490918 5_4:-6351424 None:intergenic
AGAACTTATTAGCAAGAGCC+AGG 0.498898 5_4:-6352395 None:intergenic
CATCTTCATCTTCATCACTC+TGG 0.499592 5_4:-6349459 None:intergenic
GCTGCAACCAATACTGATAG+TGG 0.503530 5_4:-6356258 None:intergenic
AAGGAAATTGTTCTCTGTAG+TGG 0.503531 5_4:-6356438 None:intergenic
TTGACGGCAGCTATCTGTGC+TGG 0.506226 5_4:+6352097 Msa0833190:CDS
AGAACAATTTCCTTTGAGAC+AGG 0.506235 5_4:+6356447 Msa0833190:CDS
GCAAAGTAGCCTCCTTGCCC+TGG 0.511629 5_4:+6352377 Msa0833190:CDS
TCTCCGCTTATGTCTTTGAT+GGG 0.517610 5_4:+6357138 Msa0833190:CDS
ATCAGGCGCAGGGATGGTAT+TGG 0.520885 5_4:+6351686 Msa0833190:intron
ATAGCTGGCTATATGCTAAG+TGG 0.521600 5_4:+6352211 Msa0833190:CDS
GCAAAGTAGCCTCCTTGCCT+TGG 0.521783 5_4:+6356564 Msa0833190:CDS
GGATATTTGATGTTTGCAGT+TGG 0.525927 5_4:+6355587 Msa0833190:CDS
GTGCTAGCAAGGACTACATA+AGG 0.527952 5_4:-6355392 None:intergenic
CTTTGACGTGGTTTACAACA+AGG 0.528253 5_4:+6350437 Msa0833190:CDS
GCAACAAAATAGAAATTCCA+AGG 0.528862 5_4:-6352159 None:intergenic
AACATCAAATATCCTAGTGC+AGG 0.529146 5_4:-6355578 None:intergenic
CGGGTCGGGTTGGTGAGAAT+CGG 0.531942 5_4:-6349745 None:intergenic
AGATACTATGCTCCTGCACT+AGG 0.533001 5_4:+6355566 Msa0833190:intron
GATTCGGTGTCGGGTCGGGT+TGG 0.538982 5_4:-6349755 None:intergenic
AGAATGATTCGGTGTCGGGT+CGG 0.540212 5_4:-6349760 None:intergenic
CAAAGAAGATATCCAAGAAG+AGG 0.541913 5_4:-6355698 None:intergenic
GTTGTAAACCACGTCAAAGA+AGG 0.542670 5_4:-6350433 None:intergenic
GTGGTGCTAGGATAATAAAA+AGG 0.543398 5_4:+6349332 Msa0833190:five_prime_UTR
GGTGGGAAGTTTGAATGCAA+AGG 0.543981 5_4:-6349563 None:intergenic
TAAAACAGATATCCAAGAAG+AGG 0.547296 5_4:-6351440 None:intergenic
TAACCGGTGGCAATTTCTGC+CGG 0.547664 5_4:-6351395 None:intergenic
TAAGCTGTGACAAGTTCTGC+TGG 0.548696 5_4:-6355653 None:intergenic
TCCTATCGATGTAAAAGGAA+TGG 0.550521 5_4:+6356046 Msa0833190:CDS
CATTGAGGCATTTAATAGGC+CGG 0.551828 5_4:+6351376 Msa0833190:CDS
GCCTATAGATGTAAAAGGAA+TGG 0.557062 5_4:+6351863 Msa0833190:CDS
ATCGCTATCCACTATTTCTG+CGG 0.558329 5_4:+6355977 Msa0833190:CDS
CACTCAACATTAAGAGCAAG+TGG 0.559150 5_4:-6352124 None:intergenic
TGAGAAGAATGATTCGGTGT+CGG 0.559195 5_4:-6349765 None:intergenic
TGAATGCAAAGGAATTGAGA+AGG 0.560009 5_4:-6349552 None:intergenic
TAAAGTTGTACCTGTCTCAA+AGG 0.561214 5_4:-6356457 None:intergenic
GTGAGAATCGGAGAAGTTCG+TGG 0.561447 5_4:-6349733 None:intergenic
AGGCGCAGGGATGGTATTGG+TGG 0.562527 5_4:+6351689 Msa0833190:intron
GCGCTACCAGTGTGCTAGCA+AGG 0.562805 5_4:-6355403 None:intergenic
AAAACGTGCACCTGTCTCAA+AGG 0.564195 5_4:-6352284 None:intergenic
TGCAGAAGGCATACCGACAA+CGG 0.565342 5_4:-6356614 None:intergenic
GAAATCAAACCAAACGGCAC+GGG 0.567282 5_4:-6349371 None:intergenic
GTGGTGGTACCTATCGCTGT+TGG 0.570249 5_4:+6351906 Msa0833190:CDS
AGAAGCAGGCCAACAGCGAT+AGG 0.572011 5_4:-6351915 None:intergenic
TGCAGTTGCAGTATCGGAGA+CGG 0.572895 5_4:-6349505 None:intergenic
TCTCCAGAAATCAAACCAAA+CGG 0.573150 5_4:-6349377 None:intergenic
GTTCTTTGAAGATCCAGTTG+TGG 0.577808 5_4:+6352413 Msa0833190:CDS
TCATTAGCGTCGTACAGTGG+TGG 0.578045 5_4:-6349790 None:intergenic
CCATCCTCACCTATTGCTGA+TGG 0.581094 5_4:-6355749 None:intergenic
GAACTTGTCACAGCTTATGT+TGG 0.581638 5_4:+6355659 Msa0833190:CDS
TATAAAAGCTGACAAATGAA+AGG 0.582419 5_4:-6352191 None:intergenic
GTGTAGGATGGAAGTGTGAG+TGG 0.584009 5_4:+6349313 None:intergenic
GTTTAGCATTACGCAGATTG+TGG 0.584235 5_4:+6351887 Msa0833190:CDS
GTGGGGTGAGAAGAATGATT+CGG 0.586579 5_4:-6349771 None:intergenic
GTAAACCACGTAAAAGAATG+TGG 0.590600 5_4:-6355434 None:intergenic
AGCTGCATACTAATATTAGG+TGG 0.591828 5_4:-6349581 None:intergenic
TATTAGCAAGAGCCAGGGCA+AGG 0.598341 5_4:-6352389 None:intergenic
TATTAGCAAGAGCCAAGGCA+AGG 0.598369 5_4:-6356576 None:intergenic
AAGTGAAAAGGACTTCATTG+AGG 0.599086 5_4:+6351361 Msa0833190:CDS
GAGTGTATTAAATCTCCCCT+TGG 0.603743 5_4:+6352142 Msa0833190:CDS
GCTGCCGTCAACACAGAGAG+TGG 0.603946 5_4:-6352085 None:intergenic
GTAAACCACGTCAAAGAAGG+TGG 0.605538 5_4:-6350430 None:intergenic
CAACAAAATAGAAATTCCAA+GGG 0.607845 5_4:-6352158 None:intergenic
ATGGAAGTGTGAGTGGTGCT+AGG 0.612389 5_4:+6349320 None:intergenic
CTGGCCTGTTAAATGCCTCA+AGG 0.612933 5_4:-6355634 None:intergenic
GCTTCACATCAGGTGAGTCA+CGG 0.613502 5_4:-6356416 None:intergenic
AGACGGAAGATTGATGATTG+GGG 0.617192 5_4:-6349488 None:intergenic
TCTTCCCACCTTCTTTGACG+TGG 0.620489 5_4:+6350425 Msa0833190:CDS
GAATTTATTAGCAAGAGCCA+AGG 0.620867 5_4:-6356581 None:intergenic
AGAAATCAAACCAAACGGCA+CGG 0.622932 5_4:-6349372 None:intergenic
AATCCCATCAAAGACATAAG+CGG 0.624868 5_4:-6357141 None:intergenic
GCTGCATACTAATATTAGGT+GGG 0.627684 5_4:-6349580 None:intergenic
TGTAGTCCTTGCTAGCACAC+TGG 0.627989 5_4:+6355397 Msa0833190:CDS
ATTAGCGTCGTACAGTGGTG+GGG 0.636150 5_4:-6349788 None:intergenic
GATGAAGCAGCACATTTCAG+AGG 0.638965 5_4:-6349711 None:intergenic
TAGCATTACGCAGATTGTGG+TGG 0.646497 5_4:+6351890 Msa0833190:CDS
GAACTTATTAGCAAGAGCCA+GGG 0.647822 5_4:-6352394 None:intergenic
TAAACCACGTAAAAGAATGT+GGG 0.649335 5_4:-6355433 None:intergenic
TAAACCACGTCAAAGAAGGT+GGG 0.655452 5_4:-6350429 None:intergenic
GAATTTACCGAAATTGCAGG+AGG 0.656389 5_4:-6352441 None:intergenic
TAGCAAGAGCCAGGGCAAGG+AGG 0.657437 5_4:-6352386 None:intergenic
ATGAGCAACAGCAATAAGAG+TGG 0.677617 5_4:-6351828 None:intergenic
AGGCCGGCAGAAATTGCCAC+CGG 0.679014 5_4:+6351392 Msa0833190:CDS
AAGTGAAAAGGACTTCCTTG+AGG 0.680050 5_4:+6355619 Msa0833190:CDS
GCCGTCAACACAGAGAGTGG+AGG 0.680225 5_4:-6352082 None:intergenic
GCAACCAATACTGATAGTGG+AGG 0.681094 5_4:-6356255 None:intergenic
GTACTAGCAACGATTGCAGG+AGG 0.690202 5_4:-6350388 None:intergenic
TAGCAAGAGCCAAGGCAAGG+AGG 0.692627 5_4:-6356573 None:intergenic
AAACTGGCCAAAATAACCGG+TGG 0.696617 5_4:-6351408 None:intergenic
GCTTTACATCAGGAGAATCG+CGG 0.699620 5_4:-6352243 None:intergenic
GATTTGATGTTAAGAGCGAG+TGG 0.710228 5_4:-6356297 None:intergenic
AACAAAATAGAAATTCCAAG+GGG 0.719925 5_4:-6352157 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CAATTTTTTTTTATAGTTTT+TGG - chr5_4:6350934-6350953 None:intergenic 10.0%
!!! CAAAAAAAATTTATAGTTTT+TGG - chr5_4:6350995-6351014 None:intergenic 10.0%
!!! TTGAAAATTTTCTTATAAAT+AGG + chr5_4:6353519-6353538 Msa0833190:intron 10.0%
!!! TAATAAAAAGGAGTTTTAAA+AGG + chr5_4:6349344-6349363 Msa0833190:five_prime_UTR 15.0%
!! ATAAAAAATTAACCATGTTA+AGG - chr5_4:6350117-6350136 None:intergenic 15.0%
!! ATCATAAAACAATATGTTAT+CGG - chr5_4:6350492-6350511 None:intergenic 15.0%
!! ACTATAAAAAAAAAATTGCA+GGG - chr5_4:6350583-6350602 None:intergenic 15.0%
!! AACTATAAAAAAAAAATTGC+AGG - chr5_4:6350584-6350603 None:intergenic 15.0%
!!! AACTATAAAAAAAATTTTGC+AGG + chr5_4:6350874-6350893 Msa0833190:intron 15.0%
!!! ACTATAAAAAAAATTTTGCA+GGG + chr5_4:6350875-6350894 Msa0833190:intron 15.0%
!! AAACTATAAAAAAAAATTGC+AGG + chr5_4:6350935-6350954 Msa0833190:intron 15.0%
!! AACTATAAAAAAAAATTGCA+GGG + chr5_4:6350936-6350955 Msa0833190:intron 15.0%
!!! AAACTATAAATTTTTTTTGC+AGG + chr5_4:6350996-6351015 Msa0833190:intron 15.0%
!!! AACTATAAATTTTTTTTGCA+GGG + chr5_4:6350997-6351016 Msa0833190:intron 15.0%
!!! AACAAATCAATTTTTCTAAA+AGG - chr5_4:6351072-6351091 None:intergenic 15.0%
!! ACATAGTAATTATAAATTCA+TGG - chr5_4:6351277-6351296 None:intergenic 15.0%
!!! ATATACTTTCTAATTTTTTG+AGG + chr5_4:6351655-6351674 Msa0833190:intron 15.0%
!! ATGTTATATTGAAATATAAG+TGG + chr5_4:6352815-6352834 Msa0833190:intron 15.0%
!! AGACACTTAAATATAAATAA+TGG - chr5_4:6353142-6353161 None:intergenic 15.0%
!!! ATTTCTAAAATGTAAAATGA+TGG + chr5_4:6355073-6355092 Msa0833190:intron 15.0%
!! AACTAAAACTAGATTATATT+AGG - chr5_4:6355230-6355249 None:intergenic 15.0%
!! ATAATATCAGGAAATTTATT+TGG + chr5_4:6355722-6355741 Msa0833190:CDS 15.0%
!! ATAAAAAACAATAATAAGAG+TGG - chr5_4:6356014-6356033 None:intergenic 15.0%
!!! CTCTTATTATTGTTTTTTAT+CGG + chr5_4:6356014-6356033 Msa0833190:intron 15.0%
!!! TCTTATTATTGTTTTTTATC+GGG + chr5_4:6356015-6356034 Msa0833190:intron 15.0%
!! AAAAATAAATCTGTTAAAAC+AGG - chr5_4:6357097-6357116 None:intergenic 15.0%
!!! TATATTTTCATTCTAATACG+AGG - chr5_4:6349832-6349851 None:intergenic 20.0%
!! TTCTTAATTAGCATGAATTA+AGG + chr5_4:6349859-6349878 Msa0833190:intron 20.0%
!! TCTTAATTAGCATGAATTAA+GGG + chr5_4:6349860-6349879 Msa0833190:intron 20.0%
!!! CTTTCAATTATCTTTTGTTA+TGG + chr5_4:6350055-6350074 Msa0833190:intron 20.0%
!!! ACATGGTTAATTTTTTATTG+CGG + chr5_4:6350119-6350138 Msa0833190:intron 20.0%
!!! TCCAAAAACAAAATTTTTTG+CGG - chr5_4:6350615-6350634 None:intergenic 20.0%
!!! CAAAAACAAAAATTTTTGCA+GGG + chr5_4:6350845-6350864 Msa0833190:intron 20.0%
!!! TTTTCTAAAAGGCTAAAATA+TGG - chr5_4:6351061-6351080 None:intergenic 20.0%
!! AAAGAACTAATCAAGAAAAA+GGG - chr5_4:6351573-6351592 None:intergenic 20.0%
!! TAAAGAACTAATCAAGAAAA+AGG - chr5_4:6351574-6351593 None:intergenic 20.0%
!! AGAGTTACTTAAATAACATA+TGG - chr5_4:6352340-6352359 None:intergenic 20.0%
!!! AAATGCAAAGTTATTGTTTT+TGG + chr5_4:6352683-6352702 Msa0833190:intron 20.0%
!!! TGGTTTCTTTTCTTATATAA+AGG - chr5_4:6353293-6353312 None:intergenic 20.0%
!!! TACTTCACAAATTTTTATGA+GGG - chr5_4:6353379-6353398 None:intergenic 20.0%
!!! ATACTTCACAAATTTTTATG+AGG - chr5_4:6353380-6353399 None:intergenic 20.0%
!!! TGTGACTTTTTCTTATAAAT+TGG + chr5_4:6353483-6353502 Msa0833190:intron 20.0%
!!! AATTTTCTTATAAATAGGAC+CGG + chr5_4:6353524-6353543 Msa0833190:intron 20.0%
!! AACAAACTTAATTTAGATCA+TGG - chr5_4:6353750-6353769 None:intergenic 20.0%
!!! ATTATGTTAATTGATTTCGA+TGG - chr5_4:6353953-6353972 None:intergenic 20.0%
!! ACAAACAAAAGAACAATAAT+TGG + chr5_4:6354135-6354154 Msa0833190:intron 20.0%
!!! ATTTAAGATTTAAAGCATGA+AGG + chr5_4:6355192-6355211 Msa0833190:intron 20.0%
!!! TCAAAAATCAATGTCTATTT+TGG + chr5_4:6355340-6355359 Msa0833190:CDS 20.0%
!!! AACATAAGTGTTTTCTTAAA+AGG + chr5_4:6356157-6356176 Msa0833190:intron 20.0%
!! AAAAAGATAGAAAAACCAAA+GGG - chr5_4:6356333-6356352 None:intergenic 20.0%
!!! ACTTTAATTTCTCCATTTTT+TGG + chr5_4:6356474-6356493 Msa0833190:intron 20.0%
! ATAAGCTGCATACTAATATT+AGG - chr5_4:6349587-6349606 None:intergenic 25.0%
!!! TGATTGTGTTCATTTTAGAA+AGG + chr5_4:6350508-6350527 Msa0833190:intron 25.0%
!!! ATTTTAGAAAGGCTAAAACA+TGG + chr5_4:6350519-6350538 Msa0833190:intron 25.0%
!!! CAAAAACAAAATTTTTTGCG+GGG - chr5_4:6350613-6350632 None:intergenic 25.0%
!!! CCAAAAACAAAATTTTTTGC+GGG - chr5_4:6350614-6350633 None:intergenic 25.0%
! TGACAAATCATCACATAATT+GGG + chr5_4:6350807-6350826 Msa0833190:intron 25.0%
!!! CCTGCAAAAATTTTTGTTTT+TGG - chr5_4:6350847-6350866 None:intergenic 25.0%
!! CCAAAAACAAAAATTTTTGC+AGG + chr5_4:6350844-6350863 Msa0833190:intron 25.0%
! AAAAGGCTAAAATATGGTAT+TGG - chr5_4:6351055-6351074 None:intergenic 25.0%
! TTTAAACTGCAAATGCAAAA+TGG + chr5_4:6351164-6351183 Msa0833190:intron 25.0%
! ATAATTACTATGTGATGTAC+TGG + chr5_4:6351284-6351303 Msa0833190:intron 25.0%
!! ATTATTGCAGTAACTGTTTT+TGG + chr5_4:6351464-6351483 Msa0833190:CDS 25.0%
! ATATTATAAAGAGAGCTAGT+TGG + chr5_4:6351632-6351651 Msa0833190:intron 25.0%
! AGTATTATCGTTTCCTTTAA+GGG + chr5_4:6351980-6351999 Msa0833190:intron 25.0%
! AACAAAATAGAAATTCCAAG+GGG - chr5_4:6352160-6352179 None:intergenic 25.0%
! CAACAAAATAGAAATTCCAA+GGG - chr5_4:6352161-6352180 None:intergenic 25.0%
! TATAAAAGCTGACAAATGAA+AGG - chr5_4:6352194-6352213 None:intergenic 25.0%
!! ATTTGTTTGATGGATGAAAA+TGG - chr5_4:6352312-6352331 None:intergenic 25.0%
! TTACTTAAATAACATATGGC+AGG - chr5_4:6352336-6352355 None:intergenic 25.0%
! CAATAACAATTATATACCCT+GGG + chr5_4:6352482-6352501 Msa0833190:intron 25.0%
!! TCTTTTCTTATATAAAGGAC+CGG - chr5_4:6353288-6353307 None:intergenic 25.0%
!!! ATCTTGGTTTTGATGATTTT+TGG - chr5_4:6353313-6353332 None:intergenic 25.0%
! GCAACAACTAATAATTATCT+TGG - chr5_4:6353329-6353348 None:intergenic 25.0%
! AAAAGACCAACATTAAATGA+GGG + chr5_4:6353421-6353440 Msa0833190:intron 25.0%
! ACATTGGTATTAATTAGTAC+TGG - chr5_4:6353827-6353846 None:intergenic 25.0%
! ATTCTGAATTTCATGTTTGA+AGG - chr5_4:6353859-6353878 None:intergenic 25.0%
! TCACGTTCATAAAAAAAAGA+AGG - chr5_4:6353888-6353907 None:intergenic 25.0%
!! GAACTTTTCTTTCATTGAAA+AGG + chr5_4:6353925-6353944 Msa0833190:intron 25.0%
! ATAATAACCTATGTTGATCA+AGG + chr5_4:6353968-6353987 Msa0833190:intron 25.0%
! TAATAACCTATGTTGATCAA+GGG + chr5_4:6353969-6353988 Msa0833190:intron 25.0%
!! GTGGATATGGATTATTTATT+GGG - chr5_4:6353996-6354015 None:intergenic 25.0%
!!! TTGTCGTTATTTTCTCTAAT+AGG + chr5_4:6354065-6354084 Msa0833190:intron 25.0%
!! AACATGACTGATAATGTTAA+TGG - chr5_4:6354099-6354118 None:intergenic 25.0%
! TTCTTTGTATATAGAAAACG+TGG - chr5_4:6354453-6354472 None:intergenic 25.0%
!! TGAAAATTTTGCACTCAAAA+CGG + chr5_4:6355252-6355271 Msa0833190:intron 25.0%
! TATCTTCTTTGCATAATATC+AGG + chr5_4:6355710-6355729 Msa0833190:CDS 25.0%
!!! AGTTTTAAGAAAGAAGTTCA+GGG - chr5_4:6355837-6355856 None:intergenic 25.0%
!! ATAAGTGTTTTCTTAAAAGG+TGG + chr5_4:6356160-6356179 Msa0833190:intron 25.0%
! CTAATATTTGTAACGCTATT+CGG + chr5_4:6356223-6356242 Msa0833190:CDS 25.0%
! AAAAGATAGAAAAACCAAAG+GGG - chr5_4:6356332-6356351 None:intergenic 25.0%
! CAAAAAGATAGAAAAACCAA+AGG - chr5_4:6356334-6356353 None:intergenic 25.0%
! CATTCTTCTTATTCATTATC+AGG - chr5_4:6356961-6356980 None:intergenic 25.0%
! ATAAAGAGCAAGAAAAAACT+TGG + chr5_4:6357189-6357208 Msa0833190:CDS 25.0%
!!! CTGTGCTTTTTTTTTCAGTT+CGG + chr5_4:6349661-6349680 Msa0833190:intron 30.0%
AATTAACCATGTTAAGGCTT+TGG - chr5_4:6350111-6350130 None:intergenic 30.0%
! TGTGTATTTTCTGGATGAAT+TGG + chr5_4:6350462-6350481 Msa0833190:intron 30.0%
! TATTTTCTGGATGAATTGGT+AGG + chr5_4:6350466-6350485 Msa0833190:intron 30.0%
!!! CCCGCAAAAAATTTTGTTTT+TGG + chr5_4:6350611-6350630 Msa0833190:intron 30.0%
TGACAAATCATCACATAACT+GGG - chr5_4:6350651-6350670 None:intergenic 30.0%
GTGACAAATCATCACATAAT+TGG + chr5_4:6350806-6350825 Msa0833190:intron 30.0%
GACAAATCATCACATAATTG+GGG + chr5_4:6350808-6350827 Msa0833190:intron 30.0%
!!! AAAACTGACCTATTTTTGCA+GGG + chr5_4:6350907-6350926 Msa0833190:intron 30.0%
! ACTTCATTGAGGCATTTAAT+AGG + chr5_4:6351372-6351391 Msa0833190:CDS 30.0%
TAAAACAGATATCCAAGAAG+AGG - chr5_4:6351443-6351462 None:intergenic 30.0%
AATAGACAAAATTTCGTCTG+TGG + chr5_4:6351533-6351552 Msa0833190:intron 30.0%
GAAAAAGGGTCAAACTTAAA+GGG - chr5_4:6351559-6351578 None:intergenic 30.0%
AGAAAAAGGGTCAAACTTAA+AGG - chr5_4:6351560-6351579 None:intergenic 30.0%
TTTCGTCAAATTTATGCCTT+CGG - chr5_4:6351610-6351629 None:intergenic 30.0%
!!! TTTTTGAGGTGAAATGAATC+AGG + chr5_4:6351669-6351688 Msa0833190:intron 30.0%
GATGTCATTACTATGCTTAA+TGG - chr5_4:6351777-6351796 None:intergenic 30.0%
! ACCATTCCTTTTACATCTAT+AGG - chr5_4:6351867-6351886 None:intergenic 30.0%
CAGTATTATCGTTTCCTTTA+AGG + chr5_4:6351979-6351998 Msa0833190:intron 30.0%
GCAACAAAATAGAAATTCCA+AGG - chr5_4:6352162-6352181 None:intergenic 30.0%
ATTGGAGTCTAATCAGAATT+GGG - chr5_4:6352466-6352485 None:intergenic 30.0%
TATTGGAGTCTAATCAGAAT+TGG - chr5_4:6352467-6352486 None:intergenic 30.0%
CCAGGGTATATAATTGTTAT+TGG - chr5_4:6352484-6352503 None:intergenic 30.0%
CCAATAACAATTATATACCC+TGG + chr5_4:6352481-6352500 Msa0833190:intron 30.0%
CAGACACATATACATATAGT+CGG - chr5_4:6352551-6352570 None:intergenic 30.0%
!! TTTTTGGTCAAGAAAGTAGA+AGG + chr5_4:6352699-6352718 Msa0833190:intron 30.0%
ACTGCAATTATGTCTTTGAT+GGG + chr5_4:6352854-6352873 Msa0833190:intron 30.0%
ATTATGTCTTTGATGGGATT+TGG + chr5_4:6352860-6352879 Msa0833190:intron 30.0%
!!! GATTTGGTCTTGTTTTGATA+TGG + chr5_4:6352876-6352895 Msa0833190:intron 30.0%
!! GTTTTGATATGGAACAAAAG+TGG + chr5_4:6352887-6352906 Msa0833190:intron 30.0%
TAGATGTGTATTATGCACAT+TGG + chr5_4:6352950-6352969 Msa0833190:intron 30.0%
AGATGTGTATTATGCACATT+GGG + chr5_4:6352951-6352970 Msa0833190:intron 30.0%
TTTAGAAACTTCAAGCAAGT+TGG + chr5_4:6353171-6353190 Msa0833190:intron 30.0%
!!! GTTGGTCTTTTCAATATTAG+TGG - chr5_4:6353412-6353431 None:intergenic 30.0%
GAAAAGACCAACATTAAATG+AGG + chr5_4:6353420-6353439 Msa0833190:intron 30.0%
TGCAATCATAATGTCTTCTA+TGG + chr5_4:6353566-6353585 Msa0833190:intron 30.0%
TTTCGAATAACTGTTGTCAT+TGG + chr5_4:6353631-6353650 Msa0833190:intron 30.0%
TTGAAGGATAGATTCTACAT+TGG - chr5_4:6353843-6353862 None:intergenic 30.0%
! GGTGGATATGGATTATTTAT+TGG - chr5_4:6353997-6354016 None:intergenic 30.0%
GAATTGAGAATGTAGAAGAA+AGG - chr5_4:6354364-6354383 None:intergenic 30.0%
TTCTACATTCTCAATTCCTT+CGG + chr5_4:6354367-6354386 Msa0833190:intron 30.0%
AAACGTGGAAGAAAAGAAAT+GGG - chr5_4:6354438-6354457 None:intergenic 30.0%
AAAACGTGGAAGAAAAGAAA+TGG - chr5_4:6354439-6354458 None:intergenic 30.0%
ATGCTAACTCATTTAACACA+CGG + chr5_4:6354734-6354753 Msa0833190:intron 30.0%
!! GAATATTTAGACTTGTTGCT+TGG + chr5_4:6354793-6354812 Msa0833190:intron 30.0%
!! GCTGGAGTTAATTTTGTTTA+AGG - chr5_4:6354823-6354842 None:intergenic 30.0%
! ATGGATTATCTTAGCGAAAA+TGG + chr5_4:6355092-6355111 Msa0833190:intron 30.0%
! TAAGATTTAAAGCATGAAGG+AGG + chr5_4:6355195-6355214 Msa0833190:intron 30.0%
TAAACCACGTAAAAGAATGT+GGG - chr5_4:6355436-6355455 None:intergenic 30.0%
TGGAGTTAATTCAAGTGAAA+AGG + chr5_4:6355607-6355626 Msa0833190:CDS 30.0%
GTTCCTATCCAAAGAAAAAA+GGG - chr5_4:6355776-6355795 None:intergenic 30.0%
TGTTCCTATCCAAAGAAAAA+AGG - chr5_4:6355777-6355796 None:intergenic 30.0%
! AACCTATTATGTCAGTTTTC+AGG + chr5_4:6355804-6355823 Msa0833190:intron 30.0%
ATCCTGAAAACTGACATAAT+AGG - chr5_4:6355809-6355828 None:intergenic 30.0%
!!! GAGTTTTAAGAAAGAAGTTC+AGG - chr5_4:6355838-6355857 None:intergenic 30.0%
CTTCTTTCTTAAAACTCCTT+TGG + chr5_4:6355841-6355860 Msa0833190:intron 30.0%
! TTTTCTATCAGATCCACAAA+TGG + chr5_4:6355932-6355951 Msa0833190:CDS 30.0%
GATGTCATAACTATGCTTAA+TGG - chr5_4:6355960-6355979 None:intergenic 30.0%
CATTTGGTCTACTTCTAAAT+CGG + chr5_4:6356105-6356124 Msa0833190:CDS 30.0%
CGAATAGCGTTACAAATATT+AGG - chr5_4:6356225-6356244 None:intergenic 30.0%
AAAGATAGAAAAACCAAAGG+GGG - chr5_4:6356331-6356350 None:intergenic 30.0%
GTATCTGGTTATATTCTTAG+TGG + chr5_4:6356384-6356403 Msa0833190:CDS 30.0%
AAACTTACAGAAATTGCAGA+AGG - chr5_4:6356631-6356650 None:intergenic 30.0%
GATTTATAACCAACAGAGAA+TGG + chr5_4:6356786-6356805 Msa0833190:intron 30.0%
AATGTAATCCTCATATCGAA+AGG - chr5_4:6356878-6356897 None:intergenic 30.0%
GATATGAGGATTACATTAGA+GGG + chr5_4:6356881-6356900 Msa0833190:intron 30.0%
CTTATTCATTATCAGGATCA+GGG - chr5_4:6356954-6356973 None:intergenic 30.0%
TCTTATTCATTATCAGGATC+AGG - chr5_4:6356955-6356974 None:intergenic 30.0%
CATCTATGACTATATTGCTA+CGG - chr5_4:6357014-6357033 None:intergenic 30.0%
! GATTTTCTCTTGTTCTGATT+TGG + chr5_4:6357160-6357179 Msa0833190:CDS 30.0%
! GTGGTGCTAGGATAATAAAA+AGG + chr5_4:6349332-6349351 Msa0833190:five_prime_UTR 35.0%
TCTCCAGAAATCAAACCAAA+CGG - chr5_4:6349380-6349399 None:intergenic 35.0%
TGAATGCAAAGGAATTGAGA+AGG - chr5_4:6349555-6349574 None:intergenic 35.0%
GCTGCATACTAATATTAGGT+GGG - chr5_4:6349583-6349602 None:intergenic 35.0%
AGCTGCATACTAATATTAGG+TGG - chr5_4:6349584-6349603 None:intergenic 35.0%
!!! GCTTTTTTTTTCAGTTCGGT+TGG + chr5_4:6349665-6349684 Msa0833190:intron 35.0%
!!! TTTTTTTTCAGTTCGGTTGG+CGG + chr5_4:6349668-6349687 Msa0833190:intron 35.0%
!! TAAGCTGTTTTCGTAAGTTC+CGG - chr5_4:6349943-6349962 None:intergenic 35.0%
TTTACACCAAAGCCTTAACA+TGG + chr5_4:6350102-6350121 Msa0833190:intron 35.0%
AATCAAAAACCAAGTAACGC+AGG + chr5_4:6350268-6350287 Msa0833190:intron 35.0%
! AACAAGGTCTGTGTATTTTC+TGG + chr5_4:6350453-6350472 Msa0833190:intron 35.0%
GAAAGGCTAAAACATGGTAT+CGG + chr5_4:6350525-6350544 Msa0833190:intron 35.0%
! CAAAACTGACCTATTTTGCA+GGG - chr5_4:6350552-6350571 None:intergenic 35.0%
GACAAATCATCACATAACTG+GGG - chr5_4:6350650-6350669 None:intergenic 35.0%
GTGACAAATCATCACATAAC+TGG - chr5_4:6350652-6350671 None:intergenic 35.0%
!!! TTGTCACTTTTGTGCATATG+TGG - chr5_4:6350793-6350812 None:intergenic 35.0%
! CTGCAAAAATAGGTCAGTTT+TGG - chr5_4:6350908-6350927 None:intergenic 35.0%
!!! CAAAACTGACCTATTTTTGC+AGG + chr5_4:6350906-6350925 Msa0833190:intron 35.0%
!! TTTTTGGTCCCTGCAAAAAT+AGG - chr5_4:6350856-6350875 None:intergenic 35.0%
!!! AAAACTGGCCTATTTTTGCA+GGG + chr5_4:6350968-6350987 Msa0833190:intron 35.0%
!! TTTTTGGTCCCTGCAAAAAT+AGG - chr5_4:6350856-6350875 None:intergenic 35.0%
ACAGAACATTCTAGATGACT+AGG - chr5_4:6351136-6351155 None:intergenic 35.0%
AACATCAAAAACCCTAATGC+AGG - chr5_4:6351323-6351342 None:intergenic 35.0%
! GGTTTTTGATGTTTGCAGTT+GGG + chr5_4:6351330-6351349 Msa0833190:CDS 35.0%
! GTTTTTGATGTTTGCAGTTG+GGG + chr5_4:6351331-6351350 Msa0833190:CDS 35.0%
AAGTGAAAAGGACTTCATTG+AGG + chr5_4:6351361-6351380 Msa0833190:CDS 35.0%
AACAAACTGGCCAAAATAAC+CGG - chr5_4:6351414-6351433 None:intergenic 35.0%
GAATAGGTGAGAAATGAGAA+TGG + chr5_4:6351498-6351517 Msa0833190:intron 35.0%
! TCTTATTGCTGTTGCTCATT+GGG + chr5_4:6351832-6351851 Msa0833190:CDS 35.0%
AGACTGCCTATAGATGTAAA+AGG + chr5_4:6351858-6351877 Msa0833190:CDS 35.0%
GCCTATAGATGTAAAAGGAA+TGG + chr5_4:6351863-6351882 Msa0833190:CDS 35.0%
CGAATAGCATTGCAAATAGA+AGG - chr5_4:6352052-6352071 None:intergenic 35.0%
! CATTTGTCAGCTTTTATAGC+TGG + chr5_4:6352196-6352215 Msa0833190:CDS 35.0%
AAGGAAATTGTTCGTTGTAG+TGG - chr5_4:6352268-6352287 None:intergenic 35.0%
! TTCTTTGAAGATCCAGTTGT+GGG + chr5_4:6352414-6352433 Msa0833190:CDS 35.0%
AACTCTTCATTGCAAACTCA+CGG + chr5_4:6352631-6352650 Msa0833190:intron 35.0%
GACTGCAATTATGTCTTTGA+TGG + chr5_4:6352853-6352872 Msa0833190:intron 35.0%
CATCTAAATCCATACCTTTC+AGG - chr5_4:6352936-6352955 None:intergenic 35.0%
! TTCCAACCCAGTTTTTGTAA+GGG + chr5_4:6353078-6353097 Msa0833190:intron 35.0%
TCTCAATTATTTCACACCAC+TGG - chr5_4:6353114-6353133 None:intergenic 35.0%
ATTCCTTAAATTACTCCCTC+CGG + chr5_4:6353266-6353285 Msa0833190:intron 35.0%
TTCTTATATAAAGGACCGGA+GGG - chr5_4:6353284-6353303 None:intergenic 35.0%
TTTCTTATATAAAGGACCGG+AGG - chr5_4:6353285-6353304 None:intergenic 35.0%
TTCTAGCCCTCATTTAATGT+TGG - chr5_4:6353430-6353449 None:intergenic 35.0%
TTTCTTATAAATAGGACCGG+AGG + chr5_4:6353527-6353546 Msa0833190:intron 35.0%
TTCTTATAAATAGGACCGGA+GGG + chr5_4:6353528-6353547 Msa0833190:intron 35.0%
TAACAAAGATACGACAGAGT+TGG - chr5_4:6354018-6354037 None:intergenic 35.0%
TCTACATTCTCAATTCCTTC+GGG + chr5_4:6354368-6354387 Msa0833190:intron 35.0%
TGAAGCCAACAACAAAAACA+AGG - chr5_4:6354495-6354514 None:intergenic 35.0%
TCGAAGTTTCTTCTCAAATG+CGG + chr5_4:6354529-6354548 Msa0833190:intron 35.0%
!! AAATGATAGGAAAGTACCTG+GGG - chr5_4:6354595-6354614 None:intergenic 35.0%
!! GAAATGATAGGAAAGTACCT+GGG - chr5_4:6354596-6354615 None:intergenic 35.0%
!! AGAAATGATAGGAAAGTACC+TGG - chr5_4:6354597-6354616 None:intergenic 35.0%
ATAGTTCACATGTTTGTCCA+TGG - chr5_4:6354630-6354649 None:intergenic 35.0%
TTAAATGAGTTAGCATCCAG+AGG - chr5_4:6354730-6354749 None:intergenic 35.0%
TTCTTGCTACATGTAGTTCT+TGG + chr5_4:6355027-6355046 Msa0833190:intron 35.0%
ACGGAAAACAAAGTTAACAC+AGG + chr5_4:6355271-6355290 Msa0833190:intron 35.0%
CGGAAAACAAAGTTAACACA+GGG + chr5_4:6355272-6355291 Msa0833190:intron 35.0%
GTAAACCACGTAAAAGAATG+TGG - chr5_4:6355437-6355456 None:intergenic 35.0%
AACATCAAATATCCTAGTGC+AGG - chr5_4:6355581-6355600 None:intergenic 35.0%
GGATATTTGATGTTTGCAGT+TGG + chr5_4:6355587-6355606 Msa0833190:CDS 35.0%
CAAAGAAGATATCCAAGAAG+AGG - chr5_4:6355701-6355720 None:intergenic 35.0%
AGACTTCCTATCGATGTAAA+AGG + chr5_4:6356041-6356060 Msa0833190:CDS 35.0%
TCCTATCGATGTAAAAGGAA+TGG + chr5_4:6356046-6356065 Msa0833190:CDS 35.0%
! ACCATTCCTTTTACATCGAT+AGG - chr5_4:6356050-6356069 None:intergenic 35.0%
AGAAGTAGACCAAATGTGAT+AGG - chr5_4:6356101-6356120 None:intergenic 35.0%
AAATCAGTTAAATCCCCCTT+TGG + chr5_4:6356315-6356334 Msa0833190:CDS 35.0%
CATTTGTCATCTTTCGTATC+TGG + chr5_4:6356369-6356388 Msa0833190:CDS 35.0%
AAGGAAATTGTTCTCTGTAG+TGG - chr5_4:6356441-6356460 None:intergenic 35.0%
!! AGAACAATTTCCTTTGAGAC+AGG + chr5_4:6356447-6356466 Msa0833190:CDS 35.0%
TAAAGTTGTACCTGTCTCAA+AGG - chr5_4:6356460-6356479 None:intergenic 35.0%
! ACATCTGATGGACCAAAAAA+TGG - chr5_4:6356489-6356508 None:intergenic 35.0%
AAGCTACTACAAACATCTGA+TGG - chr5_4:6356501-6356520 None:intergenic 35.0%
AAATTCATTTGTCCAACTGC+AGG + chr5_4:6356538-6356557 Msa0833190:intron 35.0%
GAATTTATTAGCAAGAGCCA+AGG - chr5_4:6356584-6356603 None:intergenic 35.0%
CTCTATGTAGACTCCTATTA+TGG + chr5_4:6356655-6356674 Msa0833190:intron 35.0%
GACACAAACATGACCATAAT+AGG - chr5_4:6356671-6356690 None:intergenic 35.0%
GTCTCTTATCCATGTTTACA+AGG + chr5_4:6356827-6356846 Msa0833190:intron 35.0%
TATCCATGTTTACAAGGAAG+TGG + chr5_4:6356833-6356852 Msa0833190:intron 35.0%
ATCCATGTTTACAAGGAAGT+GGG + chr5_4:6356834-6356853 Msa0833190:intron 35.0%
CGATATGAGGATTACATTAG+AGG + chr5_4:6356880-6356899 Msa0833190:intron 35.0%
GCTCAAAAAACGCTTAAAAG+TGG - chr5_4:6356920-6356939 None:intergenic 35.0%
!!! TTTAAGCGTTTTTTGAGCCT+AGG + chr5_4:6356922-6356941 Msa0833190:intron 35.0%
!!! TTAAGCGTTTTTTGAGCCTA+GGG + chr5_4:6356923-6356942 Msa0833190:intron 35.0%
AATCCCATCAAAGACATAAG+CGG - chr5_4:6357144-6357163 None:intergenic 35.0%
AGAAATCAAACCAAACGGCA+CGG - chr5_4:6349375-6349394 None:intergenic 40.0%
CATCTTCATCTTCATCACTC+TGG - chr5_4:6349462-6349481 None:intergenic 40.0%
! AGACGGAAGATTGATGATTG+GGG - chr5_4:6349491-6349510 None:intergenic 40.0%
! GAGACGGAAGATTGATGATT+GGG - chr5_4:6349492-6349511 None:intergenic 40.0%
TGTTGTTGCAGTTGCAGTAT+CGG - chr5_4:6349514-6349533 None:intergenic 40.0%
!! TGAGAAGAATGATTCGGTGT+CGG - chr5_4:6349768-6349787 None:intergenic 40.0%
ACTTGTGTGAGATTGTTTGC+CGG + chr5_4:6349921-6349940 Msa0833190:intron 40.0%
! AAGGCTTTGGTGTAAAATGC+AGG - chr5_4:6350098-6350117 None:intergenic 40.0%
GAGTAAGTGCTTATGTCTTC+AGG + chr5_4:6350157-6350176 Msa0833190:intron 40.0%
AGTGCTTATGTCTTCAGGTA+AGG + chr5_4:6350162-6350181 Msa0833190:intron 40.0%
! ACGCAGGACATGATTGTTTT+TGG + chr5_4:6350284-6350303 Msa0833190:intron 40.0%
GTTTCATTTCTTTCCTCAGC+TGG + chr5_4:6350309-6350328 Msa0833190:intron 40.0%
TAAACCACGTCAAAGAAGGT+GGG - chr5_4:6350432-6350451 None:intergenic 40.0%
GTTGTAAACCACGTCAAAGA+AGG - chr5_4:6350436-6350455 None:intergenic 40.0%
CTTTGACGTGGTTTACAACA+AGG + chr5_4:6350437-6350456 Msa0833190:CDS 40.0%
! CCAAAACTGACCTATTTTGC+AGG - chr5_4:6350553-6350572 None:intergenic 40.0%
! CCTGCAAAATAGGTCAGTTT+TGG + chr5_4:6350550-6350569 Msa0833190:intron 40.0%
ATCATCACATAATTGGGGTC+AGG + chr5_4:6350813-6350832 Msa0833190:intron 40.0%
TCATCACATAATTGGGGTCA+GGG + chr5_4:6350814-6350833 Msa0833190:intron 40.0%
! CTGCAAAAATAGGCCAGTTT+TGG - chr5_4:6350969-6350988 None:intergenic 40.0%
!!! CAAAACTGGCCTATTTTTGC+AGG + chr5_4:6350967-6350986 Msa0833190:intron 40.0%
AGATACTTTGCACCTGCATT+AGG + chr5_4:6351308-6351327 Msa0833190:intron 40.0%
GATACTTTGCACCTGCATTA+GGG + chr5_4:6351309-6351328 Msa0833190:intron 40.0%
! GGGTTTTTGATGTTTGCAGT+TGG + chr5_4:6351329-6351348 Msa0833190:CDS 40.0%
TGGGGTCAATTCAAGTGAAA+AGG + chr5_4:6351349-6351368 Msa0833190:CDS 40.0%
! CATTGAGGCATTTAATAGGC+CGG + chr5_4:6351376-6351395 Msa0833190:CDS 40.0%
!! GAAATTGCCACCGGTTATTT+TGG + chr5_4:6351401-6351420 Msa0833190:CDS 40.0%
! TTTGTTGTGAAGCCTCTTCT+TGG + chr5_4:6351428-6351447 Msa0833190:CDS 40.0%
!!! ACTGTTTTTGGTCTACCAAC+AGG + chr5_4:6351476-6351495 Msa0833190:CDS 40.0%
TTTGGTCTACCAACAGGAAT+AGG + chr5_4:6351482-6351501 Msa0833190:CDS 40.0%
CATTTCTCACCTATTCCTGT+TGG - chr5_4:6351494-6351513 None:intergenic 40.0%
TTAAGTTTCTAACCGACCGA+AGG + chr5_4:6351591-6351610 Msa0833190:intron 40.0%
GTCAAATTTATGCCTTCGGT+CGG - chr5_4:6351606-6351625 None:intergenic 40.0%
!! TTTTCTAGCAGACCCAGAAA+TGG + chr5_4:6351749-6351768 Msa0833190:CDS 40.0%
!! TGCTTAATGGTGCCATTTCT+GGG - chr5_4:6351764-6351783 None:intergenic 40.0%
!! ATGCTTAATGGTGCCATTTC+TGG - chr5_4:6351765-6351784 None:intergenic 40.0%
ATGAGCAACAGCAATAAGAG+TGG - chr5_4:6351831-6351850 None:intergenic 40.0%
! CTCTTATTGCTGTTGCTCAT+TGG + chr5_4:6351831-6351850 Msa0833190:CDS 40.0%
GTTTAGCATTACGCAGATTG+TGG + chr5_4:6351887-6351906 Msa0833190:CDS 40.0%
!! AGTTCTACCGATTTAGAAGC+AGG - chr5_4:6351932-6351951 None:intergenic 40.0%
CAAGAAGACAACACCCTTAA+AGG - chr5_4:6351996-6352015 None:intergenic 40.0%
CACTCAACATTAAGAGCAAG+TGG - chr5_4:6352127-6352146 None:intergenic 40.0%
GAGTGTATTAAATCTCCCCT+TGG + chr5_4:6352142-6352161 Msa0833190:CDS 40.0%
ATAGCTGGCTATATGCTAAG+TGG + chr5_4:6352211-6352230 Msa0833190:CDS 40.0%
!! CGAACAATTTCCTTTGAGAC+AGG + chr5_4:6352274-6352293 Msa0833190:CDS 40.0%
TATGGCAGGCATTTGTTTGA+TGG - chr5_4:6352322-6352341 None:intergenic 40.0%
GAACTTATTAGCAAGAGCCA+GGG - chr5_4:6352397-6352416 None:intergenic 40.0%
AGAACTTATTAGCAAGAGCC+AGG - chr5_4:6352398-6352417 None:intergenic 40.0%
! GTTCTTTGAAGATCCAGTTG+TGG + chr5_4:6352413-6352432 Msa0833190:CDS 40.0%
GAATTTACCGAAATTGCAGG+AGG - chr5_4:6352444-6352463 None:intergenic 40.0%
TGGGAATTTACCGAAATTGC+AGG - chr5_4:6352447-6352466 None:intergenic 40.0%
GGTTTATTACCTCGTTGTGT+TGG + chr5_4:6352659-6352678 Msa0833190:intron 40.0%
! TTGCATTTTCCAACACAACG+AGG - chr5_4:6352671-6352690 None:intergenic 40.0%
AGCAGTGCTAAGATACAAGA+TGG - chr5_4:6352978-6352997 None:intergenic 40.0%
! AAAAACTGGGTTGGAAGAAG+TGG - chr5_4:6353074-6353093 None:intergenic 40.0%
! CTTCCAACCCAGTTTTTGTA+AGG + chr5_4:6353077-6353096 Msa0833190:intron 40.0%
ACACCACCCTTACAAAAACT+GGG - chr5_4:6353087-6353106 None:intergenic 40.0%
TACACCACCCTTACAAAAAC+TGG - chr5_4:6353088-6353107 None:intergenic 40.0%
CAAAATCCCACTTCACCAAT+AGG + chr5_4:6353201-6353220 Msa0833190:intron 40.0%
CTAGATCCTATTGGTGAAGT+GGG - chr5_4:6353210-6353229 None:intergenic 40.0%
!! TTGTATGGGCTAGATCCTAT+TGG - chr5_4:6353219-6353238 None:intergenic 40.0%
GATCTAGCCCATACAAAACA+GGG + chr5_4:6353223-6353242 Msa0833190:intron 40.0%
ATCTAGCCCATACAAAACAG+GGG + chr5_4:6353224-6353243 Msa0833190:intron 40.0%
! AGCTAGTAAGTACTGCTACA+TGG - chr5_4:6353774-6353793 None:intergenic 40.0%
CGACAATGACTTGAAATCGA+CGG - chr5_4:6354051-6354070 None:intergenic 40.0%
! TTGGTCAACAGTGTTTTCAG+TGG + chr5_4:6354154-6354173 Msa0833190:intron 40.0%
GAGCATGGTACATAGATTGA+AGG - chr5_4:6354335-6354354 None:intergenic 40.0%
!!! AGCCTCCTTGTTTTTGTTGT+TGG + chr5_4:6354487-6354506 Msa0833190:intron 40.0%
AGCCAACAACAAAAACAAGG+AGG - chr5_4:6354492-6354511 None:intergenic 40.0%
CGAAGTTTCTTCTCAAATGC+GGG + chr5_4:6354530-6354549 Msa0833190:intron 40.0%
!! AATGATAGGAAAGTACCTGG+GGG - chr5_4:6354594-6354613 None:intergenic 40.0%
!! CACAGGGCATCTTTCATTTT+TGG + chr5_4:6355288-6355307 Msa0833190:intron 40.0%
! TCTTCCCACATTCTTTTACG+TGG + chr5_4:6355429-6355448 Msa0833190:CDS 40.0%
AAGTGAAAAGGACTTCCTTG+AGG + chr5_4:6355619-6355638 Msa0833190:CDS 40.0%
! ACTTCCTTGAGGCATTTAAC+AGG + chr5_4:6355630-6355649 Msa0833190:CDS 40.0%
GAACTTGTCACAGCTTATGT+TGG + chr5_4:6355659-6355678 Msa0833190:CDS 40.0%
AGCTTATGTTGGTCAGTTTG+TGG + chr5_4:6355670-6355689 Msa0833190:CDS 40.0%
TTTGGTCTACCATCAGCAAT+AGG + chr5_4:6355740-6355759 Msa0833190:CDS 40.0%
!!! AGGATGGTCCCTTTTTTCTT+TGG + chr5_4:6355765-6355784 Msa0833190:intron 40.0%
!!! GGTCCCTTTTTTCTTTGGAT+AGG + chr5_4:6355770-6355789 Msa0833190:intron 40.0%
!! ATGCTTAATGGTGCCATTTG+TGG - chr5_4:6355948-6355967 None:intergenic 40.0%
!! ATCGCTATCCACTATTTCTG+CGG + chr5_4:6355977-6355996 Msa0833190:CDS 40.0%
GACAAAAACCGCAGAAATAG+TGG - chr5_4:6355988-6356007 None:intergenic 40.0%
GTGCTTGTTCCTATCACATT+TGG + chr5_4:6356089-6356108 Msa0833190:CDS 40.0%
!! ACTGATAGTGGAGGCAAAAA+CGG - chr5_4:6356249-6356268 None:intergenic 40.0%
TTTGCCTCCACTATCAGTAT+TGG + chr5_4:6356251-6356270 Msa0833190:CDS 40.0%
GATTTGATGTTAAGAGCGAG+TGG - chr5_4:6356300-6356319 None:intergenic 40.0%
! TTCTTTGAAGATCCCGTTGT+CGG + chr5_4:6356601-6356620 Msa0833190:CDS 40.0%
GTTACAAGTGTCTGCATGAA+TGG + chr5_4:6356730-6356749 Msa0833190:intron 40.0%
AGTGTCTGCATGAATGGTAT+AGG + chr5_4:6356736-6356755 Msa0833190:intron 40.0%
! AGAGAATGGTCTAGTTGGTA+AGG + chr5_4:6356800-6356819 Msa0833190:intron 40.0%
ATCCCACTTCCTTGTAAACA+TGG - chr5_4:6356839-6356858 None:intergenic 40.0%
!!! TAAGCGTTTTTTGAGCCTAG+GGG + chr5_4:6356924-6356943 Msa0833190:intron 40.0%
TCTCCGCTTATGTCTTTGAT+GGG + chr5_4:6357138-6357157 Msa0833190:CDS 40.0%
AACTTGGCAGCTGAAGAAAT+TGG + chr5_4:6357205-6357224 Msa0833190:CDS 40.0%
GAAATCAAACCAAACGGCAC+GGG - chr5_4:6349374-6349393 None:intergenic 45.0%
!! GTGCCGTTTGGTTTGATTTC+TGG + chr5_4:6349374-6349393 Msa0833190:five_prime_UTR 45.0%
! GGAGACGGAAGATTGATGAT+TGG - chr5_4:6349493-6349512 None:intergenic 45.0%
GGTGGGAAGTTTGAATGCAA+AGG - chr5_4:6349566-6349585 None:intergenic 45.0%
AGCACATTTCAGAGGAAGTC+TGG - chr5_4:6349706-6349725 None:intergenic 45.0%
GATGAAGCAGCACATTTCAG+AGG - chr5_4:6349714-6349733 None:intergenic 45.0%
!! GAGAAGAATGATTCGGTGTC+GGG - chr5_4:6349767-6349786 None:intergenic 45.0%
GTGGGGTGAGAAGAATGATT+CGG - chr5_4:6349774-6349793 None:intergenic 45.0%
TGATCATTAGCGTCGTACAG+TGG - chr5_4:6349796-6349815 None:intergenic 45.0%
CAATCATGTCCTGCGTTACT+TGG - chr5_4:6350280-6350299 None:intergenic 45.0%
AAACTTTGCTTCACCAGCTG+AGG - chr5_4:6350325-6350344 None:intergenic 45.0%
AGTGTACTAGCAACGATTGC+AGG - chr5_4:6350394-6350413 None:intergenic 45.0%
GTAAACCACGTCAAAGAAGG+TGG - chr5_4:6350433-6350452 None:intergenic 45.0%
TCATCACATAACTGGGGTCA+GGG - chr5_4:6350644-6350663 None:intergenic 45.0%
ATCATCACATAACTGGGGTC+AGG - chr5_4:6350645-6350664 None:intergenic 45.0%
GCAGGGACTAAAACCAAAAC+TGG + chr5_4:6350892-6350911 Msa0833190:intron 45.0%
GCAGGGACTAAAACCAAAAC+TGG + chr5_4:6350892-6350911 Msa0833190:intron 45.0%
! CAAAACTGGCCCATTTTGCA+GGG + chr5_4:6351028-6351047 Msa0833190:intron 45.0%
!! GGTATTGGTCCCTGCAAAAT+GGG - chr5_4:6351040-6351059 None:intergenic 45.0%
!! TGGTATTGGTCCCTGCAAAA+TGG - chr5_4:6351041-6351060 None:intergenic 45.0%
AAACTGGCCAAAATAACCGG+TGG - chr5_4:6351411-6351430 None:intergenic 45.0%
GAAGAGGCTTCACAACAAAC+TGG - chr5_4:6351427-6351446 None:intergenic 45.0%
! GTATTGGTGGCTTGTGTTAG+TGG + chr5_4:6351702-6351721 Msa0833190:CDS 45.0%
TAGCATTACGCAGATTGTGG+TGG + chr5_4:6351890-6351909 Msa0833190:CDS 45.0%
! CTGTTGGCCTGCTTCTAAAT+CGG + chr5_4:6351922-6351941 Msa0833190:CDS 45.0%
ACAGAGAGTGGAGGCAAAAA+TGG - chr5_4:6352076-6352095 None:intergenic 45.0%
GCTTTACATCAGGAGAATCG+CGG - chr5_4:6352246-6352265 None:intergenic 45.0%
! CGTTGTAGTGGCTTTACATC+AGG - chr5_4:6352256-6352275 None:intergenic 45.0%
AAAACGTGCACCTGTCTCAA+AGG - chr5_4:6352287-6352306 None:intergenic 45.0%
AGTAACTCTTCTCCAACTGC+AGG + chr5_4:6352351-6352370 Msa0833190:intron 45.0%
CTACTTTGCATTCCTGCAGT+TGG - chr5_4:6352366-6352385 None:intergenic 45.0%
CAAGAACGCTTATACTCCCA+GGG - chr5_4:6352501-6352520 None:intergenic 45.0%
TCAAGAACGCTTATACTCCC+AGG - chr5_4:6352502-6352521 None:intergenic 45.0%
TCATTGCAAACTCACGGCAT+TGG + chr5_4:6352637-6352656 Msa0833190:intron 45.0%
CATTGCAAACTCACGGCATT+GGG + chr5_4:6352638-6352657 Msa0833190:intron 45.0%
! GACAAAACAGAGCACCTGAA+AGG + chr5_4:6352919-6352938 Msa0833190:intron 45.0%
! AACAGAGCACCTGAAAGGTA+TGG + chr5_4:6352924-6352943 Msa0833190:intron 45.0%
CCTATAGTTGCTTCCTCCTT+GGG - chr5_4:6353009-6353028 None:intergenic 45.0%
TCCTATAGTTGCTTCCTCCT+TGG - chr5_4:6353010-6353029 None:intergenic 45.0%
CACCCTTACAAAAACTGGGT+TGG - chr5_4:6353083-6353102 None:intergenic 45.0%
! CAACCCAGTTTTTGTAAGGG+TGG + chr5_4:6353081-6353100 Msa0833190:intron 45.0%
GCTAGATCCTATTGGTGAAG+TGG - chr5_4:6353211-6353230 None:intergenic 45.0%
GGATCTAGCCCATACAAAAC+AGG + chr5_4:6353222-6353241 Msa0833190:intron 45.0%
! AAGCAGCCCCTGTTTTGTAT+GGG - chr5_4:6353233-6353252 None:intergenic 45.0%
! TAAGCAGCCCCTGTTTTGTA+TGG - chr5_4:6353234-6353253 None:intergenic 45.0%
GAAAAACTCAGTTCTCCCTC+CGG - chr5_4:6353546-6353565 None:intergenic 45.0%
TTGGGTCCCTTGATCAACAT+AGG - chr5_4:6353978-6353997 None:intergenic 45.0%
!! TACGACAGAGTTGGTGGATA+TGG - chr5_4:6354009-6354028 None:intergenic 45.0%
CAAAGATACGACAGAGTTGG+TGG - chr5_4:6354015-6354034 None:intergenic 45.0%
! GAAGAAAGGTTGATCGAGCA+TGG - chr5_4:6354350-6354369 None:intergenic 45.0%
GAGAGACTGAGTTACTACGT+AGG - chr5_4:6354403-6354422 None:intergenic 45.0%
!! TTGTTGGCTTCACAGAGTAC+AGG + chr5_4:6354503-6354522 Msa0833190:intron 45.0%
GCTGTGGAGCAAGAAATGAT+AGG - chr5_4:6354608-6354627 None:intergenic 45.0%
TGGATGATGACAACACGCTT+TGG + chr5_4:6354703-6354722 Msa0833190:intron 45.0%
CGGATAAGAGATGATCAACC+CGG + chr5_4:6354754-6354773 Msa0833190:intron 45.0%
ATAAGAGATGATCAACCCGG+TGG + chr5_4:6354757-6354776 Msa0833190:intron 45.0%
ATCCATGCTTTCTGACAAGC+TGG - chr5_4:6354841-6354860 None:intergenic 45.0%
GTAGTTCTTGGCACATAGAG+TGG + chr5_4:6355039-6355058 Msa0833190:intron 45.0%
GTGCTAGCAAGGACTACATA+AGG - chr5_4:6355395-6355414 None:intergenic 45.0%
! CTTTTACGTGGTTTACCAGC+AGG + chr5_4:6355441-6355460 Msa0833190:CDS 45.0%
AAGAAAATCGACAGACCTGC+TGG - chr5_4:6355459-6355478 None:intergenic 45.0%
AGATACTATGCTCCTGCACT+AGG + chr5_4:6355566-6355585 Msa0833190:intron 45.0%
TAAGCTGTGACAAGTTCTGC+TGG - chr5_4:6355656-6355675 None:intergenic 45.0%
TTTGTGGTGAAGCCTCTTCT+TGG + chr5_4:6355686-6355705 Msa0833190:CDS 45.0%
TCTACCATCAGCAATAGGTG+AGG + chr5_4:6355745-6355764 Msa0833190:intron 45.0%
AAACTCCTTTGGTATCCCTC+AGG + chr5_4:6355852-6355871 Msa0833190:intron 45.0%
AATACAATTCCTGCGCCTGA+GGG - chr5_4:6355870-6355889 None:intergenic 45.0%
!! GTATTGCTGGCTTGTGTTAG+TGG + chr5_4:6355885-6355904 Msa0833190:CDS 45.0%
!! GCAACCAATACTGATAGTGG+AGG - chr5_4:6356258-6356277 None:intergenic 45.0%
GCTGCAACCAATACTGATAG+TGG - chr5_4:6356261-6356280 None:intergenic 45.0%
CTACTTTGCATTCCTGCAGT+TGG - chr5_4:6352366-6352385 None:intergenic 45.0%
TATTAGCAAGAGCCAAGGCA+AGG - chr5_4:6356579-6356598 None:intergenic 45.0%
CCAACTAGACCATTCTCTGT+TGG - chr5_4:6356798-6356817 None:intergenic 45.0%
CCAACAGAGAATGGTCTAGT+TGG + chr5_4:6356795-6356814 Msa0833190:intron 45.0%
TGCTGTAGCCTTTCGATATG+AGG + chr5_4:6356867-6356886 Msa0833190:intron 45.0%
GTCTCCGCTTATGTCTTTGA+TGG + chr5_4:6357137-6357156 Msa0833190:intron 45.0%
!!! AATTTTTTTTTTATAGTTTT+TGG + chr5_4:6350586-6350605 Msa0833190:intron 5.0%
!!! AAAATTTTTTTTATAGTTTT+TGG - chr5_4:6350872-6350891 None:intergenic 5.0%
!!! AAAATTTTCAAAAATAAATT+TGG - chr5_4:6353510-6353529 None:intergenic 5.0%
!!! TTTTTTTTTTTTTTTTTTTC+TGG + chr5_4:6354683-6354702 Msa0833190:intron 5.0%
! TGCAGTTGCAGTATCGGAGA+CGG - chr5_4:6349508-6349527 None:intergenic 50.0%
!! TTTTTCAGTTCGGTTGGCGG+TGG + chr5_4:6349671-6349690 Msa0833190:intron 50.0%
GTGAGAATCGGAGAAGTTCG+TGG - chr5_4:6349736-6349755 None:intergenic 50.0%
!! AGAATGATTCGGTGTCGGGT+CGG - chr5_4:6349763-6349782 None:intergenic 50.0%
ATTAGCGTCGTACAGTGGTG+GGG - chr5_4:6349791-6349810 None:intergenic 50.0%
CATTAGCGTCGTACAGTGGT+GGG - chr5_4:6349792-6349811 None:intergenic 50.0%
TCATTAGCGTCGTACAGTGG+TGG - chr5_4:6349793-6349812 None:intergenic 50.0%
GTACTAGCAACGATTGCAGG+AGG - chr5_4:6350391-6350410 None:intergenic 50.0%
TCTTCCCACCTTCTTTGACG+TGG + chr5_4:6350425-6350444 Msa0833190:CDS 50.0%
!! GGTATCGGTCCCTGCAAAAT+AGG + chr5_4:6350540-6350559 Msa0833190:intron 50.0%
! CCTGCAAAATGGGCCAGTTT+TGG - chr5_4:6351030-6351049 None:intergenic 50.0%
! CCAAAACTGGCCCATTTTGC+AGG + chr5_4:6351027-6351046 Msa0833190:intron 50.0%
TAACCGGTGGCAATTTCTGC+CGG - chr5_4:6351398-6351417 None:intergenic 50.0%
AGGTGAAATGAATCAGGCGC+AGG + chr5_4:6351675-6351694 Msa0833190:intron 50.0%
GGTGAAATGAATCAGGCGCA+GGG + chr5_4:6351676-6351695 Msa0833190:intron 50.0%
AAATGAATCAGGCGCAGGGA+TGG + chr5_4:6351680-6351699 Msa0833190:intron 50.0%
TATTAGCAAGAGCCAGGGCA+AGG - chr5_4:6352392-6352411 None:intergenic 50.0%
GGGTATGCCTCCTGCAATTT+CGG + chr5_4:6352434-6352453 Msa0833190:CDS 50.0%
GCACTGCTGAATCTATCCCA+AGG + chr5_4:6352990-6353009 Msa0833190:intron 50.0%
CTGCTGAATCTATCCCAAGG+AGG + chr5_4:6352993-6353012 Msa0833190:intron 50.0%
CCCAAGGAGGAAGCAACTAT+AGG + chr5_4:6353006-6353025 Msa0833190:intron 50.0%
TAAGGGTGGTGTAGAACCAG+TGG + chr5_4:6353095-6353114 Msa0833190:intron 50.0%
GGACCGGAGGGAGTAATTTA+AGG - chr5_4:6353272-6353291 None:intergenic 50.0%
TGCAATGCAGTTCCTCACTC+TGG + chr5_4:6354196-6354215 Msa0833190:intron 50.0%
TATTCCACCTGACCAGAGTG+AGG - chr5_4:6354211-6354230 None:intergenic 50.0%
!! TAGGAAAGTACCTGGGGGAT+TGG - chr5_4:6354589-6354608 None:intergenic 50.0%
CATTTCTTGCTCCACAGCCA+TGG + chr5_4:6354610-6354629 Msa0833190:intron 50.0%
CACATGTTTGTCCATGGCTG+TGG - chr5_4:6354624-6354643 None:intergenic 50.0%
TTCCCTAAAGACACTGCCAC+CGG - chr5_4:6354776-6354795 None:intergenic 50.0%
CTCCAGCTTGTCAGAAAGCA+TGG + chr5_4:6354836-6354855 Msa0833190:intron 50.0%
TAGCAAGAACTGCAGCAGAC+AGG - chr5_4:6355016-6355035 None:intergenic 50.0%
TGTAGTCCTTGCTAGCACAC+TGG + chr5_4:6355397-6355416 Msa0833190:CDS 50.0%
CTGGCCTGTTAAATGCCTCA+AGG - chr5_4:6355637-6355656 None:intergenic 50.0%
CCATCCTCACCTATTGCTGA+TGG - chr5_4:6355752-6355771 None:intergenic 50.0%
CCATCAGCAATAGGTGAGGA+TGG + chr5_4:6355749-6355768 Msa0833190:intron 50.0%
CAATACAATTCCTGCGCCTG+AGG - chr5_4:6355871-6355890 None:intergenic 50.0%
AGGCGCAGGAATTGTATTGC+TGG + chr5_4:6355872-6355891 Msa0833190:intron 50.0%
GCTTCACATCAGGTGAGTCA+CGG - chr5_4:6356419-6356438 None:intergenic 50.0%
CTCTGTAGTGGCTTCACATC+AGG - chr5_4:6356429-6356448 None:intergenic 50.0%
! TGCAGAAGGCATACCGACAA+CGG - chr5_4:6356617-6356636 None:intergenic 50.0%
! AAAGGAAGTCCCGTGCCGTT+TGG + chr5_4:6349362-6349381 Msa0833190:five_prime_UTR 55.0%
!! GAATGATTCGGTGTCGGGTC+GGG - chr5_4:6349762-6349781 None:intergenic 55.0%
ATCAGGCGCAGGGATGGTAT+TGG + chr5_4:6351686-6351705 Msa0833190:intron 55.0%
GTGGTGGTACCTATCGCTGT+TGG + chr5_4:6351906-6351925 Msa0833190:CDS 55.0%
AGAAGCAGGCCAACAGCGAT+AGG - chr5_4:6351918-6351937 None:intergenic 55.0%
GCCTCCACTCTCTGTGTTGA+CGG + chr5_4:6352081-6352100 Msa0833190:CDS 55.0%
TTGACGGCAGCTATCTGTGC+TGG + chr5_4:6352097-6352116 Msa0833190:CDS 55.0%
TGCAGTTCCTCACTCTGGTC+AGG + chr5_4:6354201-6354220 Msa0833190:intron 55.0%
AGTTCCTCACTCTGGTCAGG+TGG + chr5_4:6354204-6354223 Msa0833190:intron 55.0%
! CGTAGGAAGTGTGAACCCGA+AGG - chr5_4:6354386-6354405 None:intergenic 55.0%
TGCGGGTCGCTAAACTCTTC+AGG + chr5_4:6354547-6354566 Msa0833190:intron 55.0%
GGGGATTGGATCAGGTGTCA+GGG - chr5_4:6354575-6354594 None:intergenic 55.0%
AGTACCTGGGGGATTGGATC+AGG - chr5_4:6354583-6354602 None:intergenic 55.0%
CCAGCTAGAGACATGTCACG+TGG - chr5_4:6354656-6354675 None:intergenic 55.0%
CCACGTGACATGTCTCTAGC+TGG + chr5_4:6354653-6354672 Msa0833190:intron 55.0%
GACAACACGCTTTGGTCCTC+TGG + chr5_4:6354711-6354730 Msa0833190:intron 55.0%
AACCCGGTGGCAGTGTCTTT+AGG + chr5_4:6354770-6354789 Msa0833190:intron 55.0%
ACCCGGTGGCAGTGTCTTTA+GGG + chr5_4:6354771-6354790 Msa0833190:intron 55.0%
TCCCTAAAGACACTGCCACC+GGG - chr5_4:6354775-6354794 None:intergenic 55.0%
TTGGTTGCAGCTCTCTCTGC+AGG + chr5_4:6356270-6356289 Msa0833190:CDS 55.0%
GCAAAGTAGCCTCCTTGCCT+TGG + chr5_4:6356564-6356583 Msa0833190:CDS 55.0%
TAGCAAGAGCCAAGGCAAGG+AGG - chr5_4:6356576-6356595 None:intergenic 55.0%
! GCAGAAGGCATACCGACAAC+GGG - chr5_4:6356616-6356635 None:intergenic 55.0%
!! CGGGTCGGGTTGGTGAGAAT+CGG - chr5_4:6349748-6349767 None:intergenic 60.0%
AGGCCGGCAGAAATTGCCAC+CGG + chr5_4:6351392-6351411 Msa0833190:CDS 60.0%
! AGGCGCAGGGATGGTATTGG+TGG + chr5_4:6351689-6351708 Msa0833190:intron 60.0%
GCCGTCAACACAGAGAGTGG+AGG - chr5_4:6352085-6352104 None:intergenic 60.0%
GCTGCCGTCAACACAGAGAG+TGG - chr5_4:6352088-6352107 None:intergenic 60.0%
GCAAAGTAGCCTCCTTGCCC+TGG + chr5_4:6352377-6352396 Msa0833190:CDS 60.0%
TAGCAAGAGCCAGGGCAAGG+AGG - chr5_4:6352389-6352408 None:intergenic 60.0%
! GCAGGAGGCATACCCACAAC+TGG - chr5_4:6352429-6352448 None:intergenic 60.0%
GGGGGATTGGATCAGGTGTC+AGG - chr5_4:6354576-6354595 None:intergenic 60.0%
GACACCTGATCCAATCCCCC+AGG + chr5_4:6354576-6354595 Msa0833190:intron 60.0%
GCGCTACCAGTGTGCTAGCA+AGG - chr5_4:6355406-6355425 None:intergenic 60.0%
CTGCGCCTGAGGGATACCAA+AGG - chr5_4:6355860-6355879 None:intergenic 60.0%
CTTTGGTATCCCTCAGGCGC+AGG + chr5_4:6355858-6355877 Msa0833190:intron 60.0%
CAGGATCAGGGAGAACCCCT+AGG - chr5_4:6356942-6356961 None:intergenic 60.0%
!! GATTCGGTGTCGGGTCGGGT+TGG - chr5_4:6349758-6349777 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 6349323 6357241 6349323 ID=Msa0833190;Name=Msa0833190
chr5_4 mRNA 6349323 6357241 6349323 ID=Msa0833190-mRNA-1;Parent=Msa0833190;Name=Msa0833190-mRNA-1;_AED=0.23;_eAED=0.23;_QI=84|0.42|0.4|1|0.71|0.66|15|0|716
chr5_4 exon 6349323 6349593 6349323 ID=Msa0833190-mRNA-1:exon:2746;Parent=Msa0833190-mRNA-1
chr5_4 exon 6349679 6349797 6349679 ID=Msa0833190-mRNA-1:exon:2747;Parent=Msa0833190-mRNA-1
chr5_4 exon 6350328 6350458 6350328 ID=Msa0833190-mRNA-1:exon:2748;Parent=Msa0833190-mRNA-1
chr5_4 exon 6351310 6351503 6351310 ID=Msa0833190-mRNA-1:exon:2749;Parent=Msa0833190-mRNA-1
chr5_4 exon 6351697 6351943 6351697 ID=Msa0833190-mRNA-1:exon:2750;Parent=Msa0833190-mRNA-1
chr5_4 exon 6352042 6352295 6352042 ID=Msa0833190-mRNA-1:exon:2751;Parent=Msa0833190-mRNA-1
chr5_4 exon 6352373 6352455 6352373 ID=Msa0833190-mRNA-1:exon:2752;Parent=Msa0833190-mRNA-1
chr5_4 exon 6355332 6355462 6355332 ID=Msa0833190-mRNA-1:exon:2753;Parent=Msa0833190-mRNA-1
chr5_4 exon 6355568 6355761 6355568 ID=Msa0833190-mRNA-1:exon:2754;Parent=Msa0833190-mRNA-1
chr5_4 exon 6355874 6355998 6355874 ID=Msa0833190-mRNA-1:exon:2755;Parent=Msa0833190-mRNA-1
chr5_4 exon 6356041 6356126 6356041 ID=Msa0833190-mRNA-1:exon:2756;Parent=Msa0833190-mRNA-1
chr5_4 exon 6356215 6356336 6356215 ID=Msa0833190-mRNA-1:exon:2757;Parent=Msa0833190-mRNA-1
chr5_4 exon 6356358 6356468 6356358 ID=Msa0833190-mRNA-1:exon:2758;Parent=Msa0833190-mRNA-1
chr5_4 exon 6356560 6356622 6356560 ID=Msa0833190-mRNA-1:exon:2759;Parent=Msa0833190-mRNA-1
chr5_4 exon 6357138 6357241 6357138 ID=Msa0833190-mRNA-1:exon:2760;Parent=Msa0833190-mRNA-1
chr5_4 five_prime_UTR 6349323 6349406 6349323 ID=Msa0833190-mRNA-1:five_prime_utr;Parent=Msa0833190-mRNA-1
chr5_4 CDS 6349407 6349593 6349407 ID=Msa0833190-mRNA-1:cds;Parent=Msa0833190-mRNA-1
chr5_4 CDS 6349679 6349797 6349679 ID=Msa0833190-mRNA-1:cds;Parent=Msa0833190-mRNA-1
chr5_4 CDS 6350328 6350458 6350328 ID=Msa0833190-mRNA-1:cds;Parent=Msa0833190-mRNA-1
chr5_4 CDS 6351310 6351503 6351310 ID=Msa0833190-mRNA-1:cds;Parent=Msa0833190-mRNA-1
chr5_4 CDS 6351697 6351943 6351697 ID=Msa0833190-mRNA-1:cds;Parent=Msa0833190-mRNA-1
chr5_4 CDS 6352042 6352295 6352042 ID=Msa0833190-mRNA-1:cds;Parent=Msa0833190-mRNA-1
chr5_4 CDS 6352373 6352455 6352373 ID=Msa0833190-mRNA-1:cds;Parent=Msa0833190-mRNA-1
chr5_4 CDS 6355332 6355462 6355332 ID=Msa0833190-mRNA-1:cds;Parent=Msa0833190-mRNA-1
chr5_4 CDS 6355568 6355761 6355568 ID=Msa0833190-mRNA-1:cds;Parent=Msa0833190-mRNA-1
chr5_4 CDS 6355874 6355998 6355874 ID=Msa0833190-mRNA-1:cds;Parent=Msa0833190-mRNA-1
chr5_4 CDS 6356041 6356126 6356041 ID=Msa0833190-mRNA-1:cds;Parent=Msa0833190-mRNA-1
chr5_4 CDS 6356215 6356336 6356215 ID=Msa0833190-mRNA-1:cds;Parent=Msa0833190-mRNA-1
chr5_4 CDS 6356358 6356468 6356358 ID=Msa0833190-mRNA-1:cds;Parent=Msa0833190-mRNA-1
chr5_4 CDS 6356560 6356622 6356560 ID=Msa0833190-mRNA-1:cds;Parent=Msa0833190-mRNA-1
chr5_4 CDS 6357138 6357241 6357138 ID=Msa0833190-mRNA-1:cds;Parent=Msa0833190-mRNA-1
Gene Sequence

>Msa0833190

ATGTTCGTTGAAATAAAAAACATGAACTCAATTTCTTCATCTTCATCATCAACCAGAGTGATGAAGATGAAGATGACTCTTCCCCAATCATCAATCTTCCGTCTCCGATACTGCAACTGCAACAACATCTCTTCATCTTCTTCTTCCTTCTCAATTCCTTTGCATTCAAACTTCCCACCTAATATTATTCGGTTGGCGGTGGTTTCGAGCTCCAGACTTCCTCTGAAATGTGCTGCTTCATCCACGAACTTCTCCGATTCTCACCAACCCGACCCGACACCGAATCATTCTTCTCACCCCACCACTCTGGTGAAGCAAAGTTTTCTGTCTATTTTAGAGATTCTGAAGAACTCAAATTCACTTCTGCCTCCTGCAATCGTTGCTAGTACACTGCTAGCTCTAATCTTCCCACCTTCTTTGACGTGGTTTACAACAAGATACTTTGCACCTGCATTAGGGTTTTTGATGTTTGCAGTTGGGGTCAATTCAAGTGAAAAGGACTTCATTGAGGCATTTAATAGGCCGGCAGAAATTGCCACCGGTTATTTTGGCCAGTTTGTTGTGAAGCCTCTTCTTGGATATCTGTTTTATATTATTGCAGTAACTGTTTTTGGTCTACCAACAGGAATAGGGATGGTATTGGTGGCTTGTGTTAGTGGAGCTCAGCTCTCAAATTATGCTACTTTTCTAGCAGACCCAGAAATGGCACCATTAAGCATAGTAATGACATCATTGTCAACTGCTTCTGCTGTCTTTGTCACACCACTCTTATTGCTGTTGCTCATTGGGAAGAGACTGCCTATAGATGTAAAAGGAATGGTGTTTAGCATTACGCAGATTGTGGTGGTACCTATCGCTGTTGGCCTGCTTCTAAATCGCTTCTTTCCTTCTATTTGCAATGCTATTCGACCATTTTTGCCTCCACTCTCTGTGTTGACGGCAGCTATCTGTGCTGGAGCGCCACTTGCTCTTAATGTTGAGTGTATTAAATCTCCCCTTGGAATTTCTATTTTGTTGCTTGTTGTTGCCTTTCATTTGTCAGCTTTTATAGCTGGCTATATGCTAAGTGGATCTGTCTTCCGCGATTCTCCTGATGTAAAGCCACTACAACGAACAATTTCCTTTGAGACAGGAATGCAAAGTAGCCTCCTTGCCCTGGCTCTTGCTAATAAGTTCTTTGAAGATCCAGTTGTGGGTATGCCTCCTGCAATTTCGATAATGAATCAAAAATCAATGTCTATTTTGGAGATTCTAAAGCAAGCAAATTCAATTCTACCTTATGTAGTCCTTGCTAGCACACTGGTAGCGCTTGTCTTCCCACATTCTTTTACGTGGTTTACCAGCAGATACTATGCTCCTGCACTAGGATATTTGATGTTTGCAGTTGGAGTTAATTCAAGTGAAAAGGACTTCCTTGAGGCATTTAACAGGCCAGCAGAACTTGTCACAGCTTATGTTGGTCAGTTTGTGGTGAAGCCTCTTCTTGGATATCTTCTTTGCATAATATCAGGAAATTTATTTGGTCTACCATCAGCAATAGGCGCAGGAATTGTATTGCTGGCTTGTGTTAGTGGAGCGCAGCTCTCAAGTTACACTACTTTTCTATCAGATCCACAAATGGCACCATTAAGCATAGTTATGACATCGCTATCCACTATTTCTGCGAGACTTCCTATCGATGTAAAAGGAATGGTGTTTAGTATTACTCAGATTGTGCTTGTTCCTATCACATTTGGTCTACTTCTAAATCGATTCTATCCTAATATTTGTAACGCTATTCGGCCGTTTTTGCCTCCACTATCAGTATTGGTTGCAGCTCTCTCTGCAGGAGCACCACTCGCTCTTAACATCAAATCAGTTAAATCCCCCTTTGCTGTTGCTTTTCATTTGTCATCTTTCGTATCTGGTTATATTCTTAGTGGATTCATCTTCCGTGACTCACCTGATGTGAAGCCACTACAGAGAACAATTTCCTTTGAGACAGGAATGCAAAGTAGCCTCCTTGCCTTGGCTCTTGCTAATAAATTCTTTGAAGATCCCGTTGTCGTCTCCGCTTATGTCTTTGATGGGATTTTCTCTTGTTCTGATTTGGTCGAAAATAAAGAGCAAGAAAAAACTTGGCAGCTGAAGAAATTGGTTCATCTTGTGTAG
Protein sequence

>Msa0833190

MFVEIKNMNSISSSSSSTRVMKMKMTLPQSSIFRLRYCNCNNISSSSSSFSIPLHSNFPPNIIRLAVVSSSRLPLKCAASSTNFSDSHQPDPTPNHSSHPTTLVKQSFLSILEILKNSNSLLPPAIVASTLLALIFPPSLTWFTTRYFAPALGFLMFAVGVNSSEKDFIEAFNRPAEIATGYFGQFVVKPLLGYLFYIIAVTVFGLPTGIGMVLVACVSGAQLSNYATFLADPEMAPLSIVMTSLSTASAVFVTPLLLLLLIGKRLPIDVKGMVFSITQIVVVPIAVGLLLNRFFPSICNAIRPFLPPLSVLTAAICAGAPLALNVECIKSPLGISILLLVVAFHLSAFIAGYMLSGSVFRDSPDVKPLQRTISFETGMQSSLLALALANKFFEDPVVGMPPAISIMNQKSMSILEILKQANSILPYVVLASTLVALVFPHSFTWFTSRYYAPALGYLMFAVGVNSSEKDFLEAFNRPAELVTAYVGQFVVKPLLGYLLCIISGNLFGLPSAIGAGIVLLACVSGAQLSSYTTFLSDPQMAPLSIVMTSLSTISARLPIDVKGMVFSITQIVLVPITFGLLLNRFYPNICNAIRPFLPPLSVLVAALSAGAPLALNIKSVKSPFAVAFHLSSFVSGYILSGFIFRDSPDVKPLQRTISFETGMQSSLLALALANKFFEDPVVVSAYVFDGIFSCSDLVENKEQEKTWQLKKLVHLV*