Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36908.t1 | XP_013444949.1 | 98 | 293 | 6 | 0 | 1 | 293 | 27 | 319 | 1.90E-168 | 601.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36908.t1 | Q9LEW8 | 79.9 | 294 | 58 | 1 | 1 | 293 | 33 | 326 | 5.2e-143 | 508.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36908.t1 | A0A072TNA5 | 98.0 | 293 | 6 | 0 | 1 | 293 | 27 | 319 | 1.3e-168 | 601.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene36908 | 0.821879 | 3.19E-53 | -1.69E-46 |
| MS.gene049173 | MS.gene36908 | 0.807174 | 5.75E-50 | -1.69E-46 |
| MS.gene049217 | MS.gene36908 | 0.82788 | 1.22E-54 | -1.69E-46 |
| MS.gene049222 | MS.gene36908 | 0.870027 | 1.99E-66 | -1.69E-46 |
| MS.gene049232 | MS.gene36908 | 0.801428 | 9.05E-49 | -1.69E-46 |
| MS.gene049285 | MS.gene36908 | 0.850174 | 2.01E-60 | -1.69E-46 |
| MS.gene049320 | MS.gene36908 | 0.833285 | 5.82E-56 | -1.69E-46 |
| MS.gene049356 | MS.gene36908 | 0.818729 | 1.68E-52 | -1.69E-46 |
| MS.gene049369 | MS.gene36908 | 0.820154 | 7.97E-53 | -1.69E-46 |
| MS.gene049427 | MS.gene36908 | 0.830606 | 2.67E-55 | -1.69E-46 |
| MS.gene049609 | MS.gene36908 | 0.866768 | 2.24E-65 | -1.69E-46 |
| MS.gene049633 | MS.gene36908 | 0.878832 | 2.04E-69 | -1.69E-46 |
| MS.gene049805 | MS.gene36908 | 0.849423 | 3.27E-60 | -1.69E-46 |
| MS.gene050163 | MS.gene36908 | 0.830086 | 3.58E-55 | -1.69E-46 |
| MS.gene050165 | MS.gene36908 | 0.818289 | 2.12E-52 | -1.69E-46 |
| MS.gene050323 | MS.gene36908 | 0.808174 | 3.52E-50 | -1.69E-46 |
| MS.gene050333 | MS.gene36908 | 0.824179 | 9.29E-54 | -1.69E-46 |
| MS.gene050432 | MS.gene36908 | 0.808879 | 2.49E-50 | -1.69E-46 |
| MS.gene050444 | MS.gene36908 | 0.801997 | 6.91E-49 | -1.69E-46 |
| MS.gene050504 | MS.gene36908 | 0.832044 | 1.18E-55 | -1.69E-46 |
| MS.gene050518 | MS.gene36908 | 0.810938 | 8.98E-51 | -1.69E-46 |
| MS.gene050520 | MS.gene36908 | 0.822084 | 2.86E-53 | -1.69E-46 |
| MS.gene050538 | MS.gene36908 | 0.813104 | 3.03E-51 | -1.69E-46 |
| MS.gene050593 | MS.gene36908 | 0.849486 | 3.14E-60 | -1.69E-46 |
| MS.gene050612 | MS.gene36908 | 0.831467 | 1.64E-55 | -1.69E-46 |
| MS.gene050675 | MS.gene36908 | 0.843585 | 1.28E-58 | -1.69E-46 |
| MS.gene050699 | MS.gene36908 | 0.831747 | 1.40E-55 | -1.69E-46 |
| MS.gene050747 | MS.gene36908 | 0.87842 | 2.85E-69 | -1.69E-46 |
| MS.gene050772 | MS.gene36908 | 0.874282 | 7.63E-68 | -1.69E-46 |
| MS.gene05080 | MS.gene36908 | 0.858006 | 1.11E-62 | -1.69E-46 |
| MS.gene05081 | MS.gene36908 | 0.807129 | 5.88E-50 | -1.69E-46 |
| MS.gene050868 | MS.gene36908 | 0.835458 | 1.66E-56 | -1.69E-46 |
| MS.gene050871 | MS.gene36908 | 0.833831 | 4.26E-56 | -1.69E-46 |
| MS.gene050950 | MS.gene36908 | 0.885583 | 7.18E-72 | -1.69E-46 |
| MS.gene050986 | MS.gene36908 | 0.834386 | 3.09E-56 | -1.69E-46 |
| MS.gene05105 | MS.gene36908 | 0.827527 | 1.49E-54 | -1.69E-46 |
| MS.gene051228 | MS.gene36908 | 0.830961 | 2.19E-55 | -1.69E-46 |
| MS.gene051317 | MS.gene36908 | 0.801545 | 8.56E-49 | -1.69E-46 |
| MS.gene051387 | MS.gene36908 | 0.82684 | 2.18E-54 | -1.69E-46 |
| MS.gene051551 | MS.gene36908 | 0.81028 | 1.25E-50 | -1.69E-46 |
| MS.gene051617 | MS.gene36908 | 0.847722 | 9.66E-60 | -1.69E-46 |
| MS.gene051666 | MS.gene36908 | 0.816839 | 4.50E-52 | -1.69E-46 |
| MS.gene051692 | MS.gene36908 | 0.811034 | 8.57E-51 | -1.69E-46 |
| MS.gene051694 | MS.gene36908 | 0.812718 | 3.68E-51 | -1.69E-46 |
| MS.gene051810 | MS.gene36908 | 0.861984 | 6.99E-64 | -1.69E-46 |
| MS.gene051838 | MS.gene36908 | 0.85976 | 3.31E-63 | -1.69E-46 |
| MS.gene051858 | MS.gene36908 | 0.841622 | 4.25E-58 | -1.69E-46 |
| MS.gene051949 | MS.gene36908 | 0.80047 | 1.42E-48 | -1.69E-46 |
| MS.gene052164 | MS.gene36908 | 0.834959 | 2.22E-56 | -1.69E-46 |
| MS.gene052271 | MS.gene36908 | 0.814141 | 1.79E-51 | -1.69E-46 |
| MS.gene052379 | MS.gene36908 | 0.838417 | 2.91E-57 | -1.69E-46 |
| MS.gene052421 | MS.gene36908 | 0.833338 | 5.65E-56 | -1.69E-46 |
| MS.gene052484 | MS.gene36908 | 0.81361 | 2.35E-51 | -1.69E-46 |
| MS.gene052503 | MS.gene36908 | 0.801107 | 1.05E-48 | -1.69E-46 |
| MS.gene052615 | MS.gene36908 | 0.902315 | 1.10E-78 | -1.69E-46 |
| MS.gene052870 | MS.gene36908 | 0.851873 | 6.68E-61 | -1.69E-46 |
| MS.gene052872 | MS.gene36908 | 0.851451 | 8.80E-61 | -1.69E-46 |
| MS.gene052916 | MS.gene36908 | 0.819639 | 1.05E-52 | -1.69E-46 |
| MS.gene052966 | MS.gene36908 | 0.843457 | 1.39E-58 | -1.69E-46 |
| MS.gene053009 | MS.gene36908 | 0.830984 | 2.16E-55 | -1.69E-46 |
| MS.gene053203 | MS.gene36908 | 0.851618 | 7.89E-61 | -1.69E-46 |
| MS.gene053207 | MS.gene36908 | 0.891899 | 2.61E-74 | -1.69E-46 |
| MS.gene053209 | MS.gene36908 | 0.81267 | 3.77E-51 | -1.69E-46 |
| MS.gene053213 | MS.gene36908 | 0.855086 | 7.99E-62 | -1.69E-46 |
| MS.gene053286 | MS.gene36908 | 0.851648 | 7.74E-61 | -1.69E-46 |
| MS.gene053322 | MS.gene36908 | 0.82544 | 4.68E-54 | -1.69E-46 |
| MS.gene053436 | MS.gene36908 | 0.814669 | 1.37E-51 | -1.69E-46 |
| MS.gene053449 | MS.gene36908 | 0.807879 | 4.07E-50 | -1.69E-46 |
| MS.gene053480 | MS.gene36908 | 0.80537 | 1.38E-49 | -1.69E-46 |
| MS.gene053574 | MS.gene36908 | 0.866611 | 2.51E-65 | -1.69E-46 |
| MS.gene053626 | MS.gene36908 | 0.817945 | 2.53E-52 | -1.69E-46 |
| MS.gene053632 | MS.gene36908 | 0.850657 | 1.47E-60 | -1.69E-46 |
| MS.gene053824 | MS.gene36908 | 0.851705 | 7.46E-61 | -1.69E-46 |
| MS.gene053912 | MS.gene36908 | 0.857576 | 1.49E-62 | -1.69E-46 |
| MS.gene053916 | MS.gene36908 | 0.80501 | 1.64E-49 | -1.69E-46 |
| MS.gene054408 | MS.gene36908 | 0.850861 | 1.29E-60 | -1.69E-46 |
| MS.gene054595 | MS.gene36908 | 0.826747 | 2.29E-54 | -1.69E-46 |
| MS.gene054600 | MS.gene36908 | 0.863771 | 1.96E-64 | -1.69E-46 |
| MS.gene054642 | MS.gene36908 | 0.842319 | 2.78E-58 | -1.69E-46 |
| MS.gene054927 | MS.gene36908 | 0.828868 | 7.08E-55 | -1.69E-46 |
| MS.gene05494 | MS.gene36908 | 0.853098 | 2.99E-61 | -1.69E-46 |
| MS.gene054954 | MS.gene36908 | 0.828087 | 1.09E-54 | -1.69E-46 |
| MS.gene05505 | MS.gene36908 | 0.858137 | 1.01E-62 | -1.69E-46 |
| MS.gene055206 | MS.gene36908 | 0.853018 | 3.15E-61 | -1.69E-46 |
| MS.gene055224 | MS.gene36908 | 0.815771 | 7.79E-52 | -1.69E-46 |
| MS.gene055289 | MS.gene36908 | 0.812519 | 4.07E-51 | -1.69E-46 |
| MS.gene055362 | MS.gene36908 | 0.833904 | 4.08E-56 | -1.69E-46 |
| MS.gene055397 | MS.gene36908 | 0.802664 | 5.04E-49 | -1.69E-46 |
| MS.gene055412 | MS.gene36908 | 0.822416 | 2.40E-53 | -1.69E-46 |
| MS.gene055486 | MS.gene36908 | 0.8009 | 1.16E-48 | -1.69E-46 |
| MS.gene055499 | MS.gene36908 | 0.807803 | 4.23E-50 | -1.69E-46 |
| MS.gene055502 | MS.gene36908 | 0.841344 | 5.03E-58 | -1.69E-46 |
| MS.gene055577 | MS.gene36908 | 0.85637 | 3.37E-62 | -1.69E-46 |
| MS.gene055647 | MS.gene36908 | 0.826 | 3.45E-54 | -1.69E-46 |
| MS.gene055722 | MS.gene36908 | 0.882638 | 8.81E-71 | -1.69E-46 |
| MS.gene055748 | MS.gene36908 | 0.810819 | 9.54E-51 | -1.69E-46 |
| MS.gene055750 | MS.gene36908 | 0.81116 | 8.04E-51 | -1.69E-46 |
| MS.gene055751 | MS.gene36908 | 0.802619 | 5.15E-49 | -1.69E-46 |
| MS.gene05589 | MS.gene36908 | 0.800328 | 1.52E-48 | -1.69E-46 |
| MS.gene05592 | MS.gene36908 | 0.823684 | 1.21E-53 | -1.69E-46 |
| MS.gene055941 | MS.gene36908 | 0.846491 | 2.10E-59 | -1.69E-46 |
| MS.gene056083 | MS.gene36908 | 0.852939 | 3.32E-61 | -1.69E-46 |
| MS.gene056166 | MS.gene36908 | 0.811097 | 8.30E-51 | -1.69E-46 |
| MS.gene056374 | MS.gene36908 | 0.833916 | 4.05E-56 | -1.69E-46 |
| MS.gene056448 | MS.gene36908 | 0.817014 | 4.11E-52 | -1.69E-46 |
| MS.gene056449 | MS.gene36908 | 0.829122 | 6.14E-55 | -1.69E-46 |
| MS.gene056487 | MS.gene36908 | 0.809003 | 2.35E-50 | -1.69E-46 |
| MS.gene056504 | MS.gene36908 | 0.806718 | 7.18E-50 | -1.69E-46 |
| MS.gene056510 | MS.gene36908 | 0.855539 | 5.90E-62 | -1.69E-46 |
| MS.gene056511 | MS.gene36908 | 0.830739 | 2.48E-55 | -1.69E-46 |
| MS.gene056609 | MS.gene36908 | 0.83944 | 1.58E-57 | -1.69E-46 |
| MS.gene056657 | MS.gene36908 | 0.844424 | 7.63E-59 | -1.69E-46 |
| MS.gene05666 | MS.gene36908 | 0.824514 | 7.75E-54 | -1.69E-46 |
| MS.gene056692 | MS.gene36908 | 0.802286 | 6.03E-49 | -1.69E-46 |
| MS.gene056897 | MS.gene36908 | 0.861146 | 1.26E-63 | -1.69E-46 |
| MS.gene057011 | MS.gene36908 | 0.823037 | 1.72E-53 | -1.69E-46 |
| MS.gene057076 | MS.gene36908 | 0.867934 | 9.49E-66 | -1.69E-46 |
| MS.gene057124 | MS.gene36908 | 0.824329 | 8.56E-54 | -1.69E-46 |
| MS.gene057129 | MS.gene36908 | 0.820148 | 7.99E-53 | -1.69E-46 |
| MS.gene057146 | MS.gene36908 | 0.817599 | 3.03E-52 | -1.69E-46 |
| MS.gene057331 | MS.gene36908 | 0.86356 | 2.28E-64 | -1.69E-46 |
| MS.gene057416 | MS.gene36908 | 0.852041 | 5.99E-61 | -1.69E-46 |
| MS.gene057658 | MS.gene36908 | 0.810673 | 1.03E-50 | -1.69E-46 |
| MS.gene057734 | MS.gene36908 | 0.8358 | 1.36E-56 | -1.69E-46 |
| MS.gene057831 | MS.gene36908 | 0.807509 | 4.88E-50 | -1.69E-46 |
| MS.gene057856 | MS.gene36908 | 0.804639 | 1.96E-49 | -1.69E-46 |
| MS.gene057857 | MS.gene36908 | 0.80424 | 2.38E-49 | -1.69E-46 |
| MS.gene058019 | MS.gene36908 | 0.802117 | 6.53E-49 | -1.69E-46 |
| MS.gene058120 | MS.gene36908 | 0.820649 | 6.14E-53 | -1.69E-46 |
| MS.gene058130 | MS.gene36908 | 0.873791 | 1.12E-67 | -1.69E-46 |
| MS.gene058323 | MS.gene36908 | 0.825154 | 5.47E-54 | -1.69E-46 |
| MS.gene058338 | MS.gene36908 | 0.820269 | 7.50E-53 | -1.69E-46 |
| MS.gene05837 | MS.gene36908 | 0.837498 | 5.02E-57 | -1.69E-46 |
| MS.gene058419 | MS.gene36908 | 0.835386 | 1.73E-56 | -1.69E-46 |
| MS.gene058544 | MS.gene36908 | 0.824291 | 8.74E-54 | -1.69E-46 |
| MS.gene058700 | MS.gene36908 | 0.813398 | 2.61E-51 | -1.69E-46 |
| MS.gene058723 | MS.gene36908 | 0.845967 | 2.92E-59 | -1.69E-46 |
| MS.gene058773 | MS.gene36908 | 0.848079 | 7.70E-60 | -1.69E-46 |
| MS.gene058838 | MS.gene36908 | 0.83379 | 4.36E-56 | -1.69E-46 |
| MS.gene05883 | MS.gene36908 | 0.832256 | 1.05E-55 | -1.69E-46 |
| MS.gene058948 | MS.gene36908 | 0.821983 | 3.02E-53 | -1.69E-46 |
| MS.gene059022 | MS.gene36908 | 0.83439 | 3.08E-56 | -1.69E-46 |
| MS.gene059023 | MS.gene36908 | 0.85049 | 1.64E-60 | -1.69E-46 |
| MS.gene059029 | MS.gene36908 | 0.831832 | 1.34E-55 | -1.69E-46 |
| MS.gene05913 | MS.gene36908 | 0.810634 | 1.05E-50 | -1.69E-46 |
| MS.gene059305 | MS.gene36908 | 0.828819 | 7.27E-55 | -1.69E-46 |
| MS.gene05934 | MS.gene36908 | 0.828835 | 7.21E-55 | -1.69E-46 |
| MS.gene059367 | MS.gene36908 | 0.812055 | 5.14E-51 | -1.69E-46 |
| MS.gene059536 | MS.gene36908 | 0.83095 | 2.20E-55 | -1.69E-46 |
| MS.gene059674 | MS.gene36908 | 0.805249 | 1.46E-49 | -1.69E-46 |
| MS.gene059677 | MS.gene36908 | 0.834406 | 3.05E-56 | -1.69E-46 |
| MS.gene059688 | MS.gene36908 | 0.810422 | 1.16E-50 | -1.69E-46 |
| MS.gene059711 | MS.gene36908 | 0.83373 | 4.51E-56 | -1.69E-46 |
| MS.gene059718 | MS.gene36908 | 0.886039 | 4.84E-72 | -1.69E-46 |
| MS.gene059756 | MS.gene36908 | 0.822627 | 2.14E-53 | -1.69E-46 |
| MS.gene059865 | MS.gene36908 | 0.827629 | 1.41E-54 | -1.69E-46 |
| MS.gene059902 | MS.gene36908 | 0.833517 | 5.10E-56 | -1.69E-46 |
| MS.gene059960 | MS.gene36908 | 0.81226 | 4.64E-51 | -1.69E-46 |
| MS.gene060356 | MS.gene36908 | 0.804402 | 2.20E-49 | -1.69E-46 |
| MS.gene060469 | MS.gene36908 | 0.801737 | 7.82E-49 | -1.69E-46 |
| MS.gene060482 | MS.gene36908 | 0.820459 | 6.78E-53 | -1.69E-46 |
| MS.gene060762 | MS.gene36908 | 0.850073 | 2.15E-60 | -1.69E-46 |
| MS.gene060778 | MS.gene36908 | 0.812309 | 4.52E-51 | -1.69E-46 |
| MS.gene06077 | MS.gene36908 | 0.813204 | 2.88E-51 | -1.69E-46 |
| MS.gene060804 | MS.gene36908 | 0.83572 | 1.42E-56 | -1.69E-46 |
| MS.gene060818 | MS.gene36908 | 0.839516 | 1.51E-57 | -1.69E-46 |
| MS.gene060835 | MS.gene36908 | 0.851212 | 1.03E-60 | -1.69E-46 |
| MS.gene060837 | MS.gene36908 | 0.846061 | 2.75E-59 | -1.69E-46 |
| MS.gene06092 | MS.gene36908 | 0.831546 | 1.57E-55 | -1.69E-46 |
| MS.gene060982 | MS.gene36908 | 0.817475 | 3.23E-52 | -1.69E-46 |
| MS.gene061041 | MS.gene36908 | 0.832792 | 7.72E-56 | -1.69E-46 |
| MS.gene061150 | MS.gene36908 | 0.839872 | 1.22E-57 | -1.69E-46 |
| MS.gene061200 | MS.gene36908 | 0.834178 | 3.48E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36908.t1 | MTR_8g032700 | 97.952 | 293 | 6 | 0 | 1 | 293 | 27 | 319 | 0.0 | 597 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36908.t1 | AT3G61080 | 79.932 | 294 | 58 | 1 | 1 | 293 | 33 | 326 | 0.0 | 506 |
| MS.gene36908.t1 | AT3G61080 | 73.438 | 320 | 58 | 2 | 1 | 293 | 33 | 352 | 2.45e-177 | 493 |
Find 76 sgRNAs with CRISPR-Local
Find 203 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATGGTTCTTTCATCATTA+TGG | 0.162392 | 8.2:-64747342 | MS.gene36908:CDS |
| ATTATGGAATTCATAGAATT+TGG | 0.175018 | 8.2:-64747326 | MS.gene36908:CDS |
| GAGGCGGAGGCTCTTGGTTT+AGG | 0.187864 | 8.2:-64747722 | MS.gene36908:CDS |
| CTTGCTTCCCAGTCTGTTCT+AGG | 0.246454 | 8.2:-64747229 | MS.gene36908:intron |
| AGGCGGAGGCTCTTGGTTTA+GGG | 0.248825 | 8.2:-64747721 | MS.gene36908:CDS |
| ATATAGTGACAGGACCATTT+TGG | 0.278148 | 8.2:-64746923 | MS.gene36908:CDS |
| TTCTCAAAGCCTGGCTGTTT+AGG | 0.296943 | 8.2:+64745074 | None:intergenic |
| TTAAATCATTACAATCTCTT+TGG | 0.303968 | 8.2:-64745020 | MS.gene36908:CDS |
| GGACACAATGAGGCAGAATT+TGG | 0.321866 | 8.2:-64745380 | MS.gene36908:CDS |
| GCTTGCTACATGGAGATCTT+TGG | 0.336936 | 8.2:-64745806 | MS.gene36908:CDS |
| ATGTCTTGGTGTGCTGGCTT+TGG | 0.369964 | 8.2:-64745356 | MS.gene36908:CDS |
| AAATGGGGAGCCTGTCATAT+TGG | 0.371731 | 8.2:-64745760 | MS.gene36908:CDS |
| TTTGGTATGTCTTGGTGTGC+TGG | 0.381004 | 8.2:-64745362 | MS.gene36908:CDS |
| AAATGGTCCTGTCACTATAT+TGG | 0.394002 | 8.2:+64746926 | None:intergenic |
| TTGATACAACCACCTCCAAC+TGG | 0.410217 | 8.2:+64747933 | None:intergenic |
| CATTACAATCTCTTTGGCTC+TGG | 0.413408 | 8.2:-64745014 | MS.gene36908:CDS |
| GGAAAATCTAGTAAAGGCTT+TGG | 0.418088 | 8.2:-64747178 | MS.gene36908:CDS |
| TCTTGGTGTGCTGGCTTTGG+AGG | 0.425900 | 8.2:-64745353 | MS.gene36908:CDS |
| CTTGCGGAAATGCACAAGTC+TGG | 0.432979 | 8.2:-64747199 | MS.gene36908:CDS |
| ACCTCCAACTGGACTAACTT+TGG | 0.435189 | 8.2:+64747944 | None:intergenic |
| ATGTTTGAGGCGGAGGCTCT+TGG | 0.437474 | 8.2:-64747728 | MS.gene36908:CDS |
| GGTCAAATGCCAGCTGCAAC+TGG | 0.448517 | 8.2:+64746947 | None:intergenic |
| CATTCTTTGTCAAAACAAAC+AGG | 0.455546 | 8.2:-64747878 | MS.gene36908:intron |
| TCCATCGATGTTTGAGGCGG+AGG | 0.462858 | 8.2:-64747735 | MS.gene36908:CDS |
| ATTAGTGTGCAGCATGAGTA+AGG | 0.465533 | 8.2:-64748015 | None:intergenic |
| TCTCTCCTCTTCTCAAAGCC+TGG | 0.466803 | 8.2:+64745065 | None:intergenic |
| AATAGTGATACAGCAGGTAT+AGG | 0.467243 | 8.2:+64745042 | None:intergenic |
| GAGAGAATCCACTCACGAAC+CGG | 0.479292 | 8.2:+64747990 | None:intergenic |
| TTGTTCTACAGGGCAGAGAT+TGG | 0.500978 | 8.2:-64745874 | MS.gene36908:intron |
| TGAAACTCTATCAGGAGTAT+TGG | 0.504217 | 8.2:-64747758 | MS.gene36908:intron |
| CTGAATCCAGTCTGAAGACC+AGG | 0.506368 | 8.2:+64746996 | None:intergenic |
| TAAATACCTGGTCTTCAGAC+TGG | 0.506390 | 8.2:-64747002 | MS.gene36908:CDS |
| TTCTACAGGGCAGAGATTGG+TGG | 0.506962 | 8.2:-64745871 | MS.gene36908:intron |
| CTTAGGCACACGGATGGTCC+TGG | 0.510384 | 8.2:+64747685 | None:intergenic |
| ATGGAATTCATAGAATTTGG+CGG | 0.510748 | 8.2:-64747323 | MS.gene36908:CDS |
| TATTGGTCCATCGATGTTTG+AGG | 0.512577 | 8.2:-64747741 | MS.gene36908:CDS |
| GGCGGAGGCTCTTGGTTTAG+GGG | 0.512741 | 8.2:-64747720 | MS.gene36908:CDS |
| ATTTGGCGGATCTAGAGATC+AGG | 0.518102 | 8.2:-64747309 | MS.gene36908:intron |
| ATAACCAAAGTTAGTCCAGT+TGG | 0.522556 | 8.2:-64747948 | MS.gene36908:CDS |
| GTGCAGCATGAGTAAGGATC+CGG | 0.532558 | 8.2:-64748009 | None:intergenic |
| ATTAGGTTACCAGTTGCAGC+TGG | 0.535369 | 8.2:-64746956 | MS.gene36908:CDS |
| AAGTCTGGAAAATCTAGTAA+AGG | 0.537898 | 8.2:-64747184 | MS.gene36908:CDS |
| ACGTTGAAAACACCATTGGC+AGG | 0.540479 | 8.2:-64747150 | MS.gene36908:intron |
| CCGTGTGCCTAAGCCGTACA+AGG | 0.543019 | 8.2:-64747675 | MS.gene36908:intron |
| AACAGCCAGGCTTTGAGAAG+AGG | 0.543273 | 8.2:-64745070 | MS.gene36908:CDS |
| AAAGTTAGTCCAGTTGGAGG+TGG | 0.546218 | 8.2:-64747942 | MS.gene36908:CDS |
| AATCGCTATGATACTGATGC+TGG | 0.547084 | 8.2:-64747903 | MS.gene36908:CDS |
| CTTCCCAGTCTGTTCTAGGA+AGG | 0.552709 | 8.2:-64747225 | MS.gene36908:intron |
| ATAGAACCATGCTTGCTACA+TGG | 0.553025 | 8.2:-64745816 | MS.gene36908:CDS |
| CCTTGTACGGCTTAGGCACA+CGG | 0.555435 | 8.2:+64747675 | None:intergenic |
| CACGCTGGGTCCAATATGAC+AGG | 0.558185 | 8.2:+64745750 | None:intergenic |
| TTCGACGTTGAAAACACCAT+TGG | 0.558330 | 8.2:-64747154 | MS.gene36908:CDS |
| TTTCTCACCTTGTACGGCTT+AGG | 0.559656 | 8.2:+64747668 | None:intergenic |
| TACAATAACATACCTGCCAA+TGG | 0.575680 | 8.2:+64747138 | None:intergenic |
| AGGCAGAATTTGGTATGTCT+TGG | 0.577942 | 8.2:-64745370 | MS.gene36908:CDS |
| AGATCTCCATGTAGCAAGCA+TGG | 0.585342 | 8.2:+64745810 | None:intergenic |
| CGTGAGTGGATTCTCTCTGA+AGG | 0.586932 | 8.2:-64747984 | MS.gene36908:CDS |
| ACCAAAGTTAGTCCAGTTGG+AGG | 0.589938 | 8.2:-64747945 | MS.gene36908:CDS |
| CATTTGACCAATATAGTGAC+AGG | 0.593763 | 8.2:-64746933 | MS.gene36908:CDS |
| GATTTAAATAGTGATACAGC+AGG | 0.595693 | 8.2:+64745036 | None:intergenic |
| GTAAGGATCCGGTTCGTGAG+TGG | 0.599596 | 8.2:-64747998 | MS.gene36908:CDS |
| GTTGGATCACTACCGTCTGA+TGG | 0.600231 | 8.2:-64747359 | MS.gene36908:CDS |
| TTGACTTACAATAACACGCT+GGG | 0.601426 | 8.2:+64745736 | None:intergenic |
| CTTGACTTACAATAACACGC+TGG | 0.607535 | 8.2:+64745735 | None:intergenic |
| CAGGTAATACCTAAACAGCC+AGG | 0.608808 | 8.2:-64745083 | MS.gene36908:CDS |
| GCCTCCGCCTCAAACATCGA+TGG | 0.612309 | 8.2:+64747734 | None:intergenic |
| TTCAATAGATGGACACAATG+AGG | 0.613547 | 8.2:-64745390 | MS.gene36908:intron |
| GTACGGCTTAGGCACACGGA+TGG | 0.632306 | 8.2:+64747679 | None:intergenic |
| TGGTCCATCGATGTTTGAGG+CGG | 0.632360 | 8.2:-64747738 | MS.gene36908:CDS |
| ATCTCTACATTGTCAAACAA+CGG | 0.632371 | 8.2:+64745837 | None:intergenic |
| GAAGACCAGGTATTTATCTG+TGG | 0.641183 | 8.2:+64747009 | None:intergenic |
| CTACATGGAGATCTTTGGAG+CGG | 0.658633 | 8.2:-64745801 | MS.gene36908:CDS |
| TAGGGGCTATGTATGAAACC+AGG | 0.667423 | 8.2:-64747703 | MS.gene36908:CDS |
| TGTTCTAGGAAGGAAGCTTG+CGG | 0.677656 | 8.2:-64747215 | MS.gene36908:CDS |
| GCACACCACAGATAAATACC+TGG | 0.681671 | 8.2:-64747014 | MS.gene36908:CDS |
| ATGATGAAAGAACCATCAGA+CGG | 0.683216 | 8.2:+64747347 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATGGAATTCATAGAATT+TGG | - | chr8.2:64745632-64745651 | MS.gene36908:intron | 20.0% |
| !! | CAACAATATATGTAAAATCA+AGG | + | chr8.2:64746505-64746524 | None:intergenic | 20.0% |
| !! | GTATGTTATTGTAATTGTTA+TGG | - | chr8.2:64745830-64745849 | MS.gene36908:CDS | 20.0% |
| !! | TTAAATCATTACAATCTCTT+TGG | - | chr8.2:64747938-64747957 | MS.gene36908:CDS | 20.0% |
| !! | TTACTTAAAACAGAGAAAAA+AGG | - | chr8.2:64746779-64746798 | MS.gene36908:intron | 20.0% |
| !!! | AAACTGTCTATACTTTTTTT+CGG | - | chr8.2:64746694-64746713 | MS.gene36908:intron | 20.0% |
| !!! | ATTCTATAACTCTTATTTTG+AGG | - | chr8.2:64747631-64747650 | MS.gene36908:intron | 20.0% |
| !!! | ATTTATCATGTATTTTTTCC+AGG | - | chr8.2:64745858-64745877 | MS.gene36908:CDS | 20.0% |
| !!! | CTTGATTTTACATATATTGT+TGG | - | chr8.2:64746503-64746522 | MS.gene36908:intron | 20.0% |
| !!! | TAATTTTAAATAATCTCTCC+AGG | - | chr8.2:64747856-64747875 | MS.gene36908:intron | 20.0% |
| ! | AAATGTCATACACTAAAATC+AGG | + | chr8.2:64746134-64746153 | None:intergenic | 25.0% |
| ! | ACTAGAACAATCATACTATA+AGG | - | chr8.2:64747523-64747542 | MS.gene36908:intron | 25.0% |
| ! | AGATTACACATTCACTAAAT+CGG | - | chr8.2:64746315-64746334 | MS.gene36908:intron | 25.0% |
| ! | ATTAAGATTCTAAATGAAGG+TGG | + | chr8.2:64746578-64746597 | None:intergenic | 25.0% |
| ! | GAGATTAAGATTCTAAATGA+AGG | + | chr8.2:64746581-64746600 | None:intergenic | 25.0% |
| ! | TTATATTGAATAAACTGAGC+AGG | - | chr8.2:64746152-64746171 | MS.gene36908:intron | 25.0% |
| ! | TTGCAAAAAAACGAATCAAA+CGG | + | chr8.2:64747334-64747353 | None:intergenic | 25.0% |
| !! | AAAGTTACCTTTTTCCAAAA+TGG | + | chr8.2:64746052-64746071 | None:intergenic | 25.0% |
| !! | TAAAATTTTCTCACCTTGTA+CGG | + | chr8.2:64745299-64745318 | None:intergenic | 25.0% |
| !! | TATAAATCGTAGAGTCTTAT+TGG | + | chr8.2:64747054-64747073 | None:intergenic | 25.0% |
| !! | TGTCATATACCATCATATTT+TGG | - | chr8.2:64745434-64745453 | MS.gene36908:intron | 25.0% |
| !! | TTTTATTACTACAAGGAATC+CGG | + | chr8.2:64746239-64746258 | None:intergenic | 25.0% |
| !!! | TTCACTAAATCGGTTTTAAA+CGG | - | chr8.2:64746325-64746344 | MS.gene36908:intron | 25.0% |
| AACAGAGTGAACAAAAATCA+TGG | + | chr8.2:64746761-64746780 | None:intergenic | 30.0% | |
| AACTAATTGCTAGGATTTGT+AGG | - | chr8.2:64745577-64745596 | MS.gene36908:intron | 30.0% | |
| AAGTCTGGAAAATCTAGTAA+AGG | - | chr8.2:64745774-64745793 | MS.gene36908:CDS | 30.0% | |
| AATTGAGGTAACTAATTGCT+AGG | - | chr8.2:64745568-64745587 | MS.gene36908:intron | 30.0% | |
| ACTGTACGATCTTAAATCAA+TGG | + | chr8.2:64746293-64746312 | None:intergenic | 30.0% | |
| ATCTCTACATTGTCAAACAA+CGG | + | chr8.2:64747124-64747143 | None:intergenic | 30.0% | |
| ATGGAATTCATAGAATTTGG+CGG | - | chr8.2:64745635-64745654 | MS.gene36908:intron | 30.0% | |
| ATTACGTCAAGTTTACAATC+CGG | - | chr8.2:64746217-64746236 | MS.gene36908:intron | 30.0% | |
| CAACAATGTGACTATATGTT+GGG | - | chr8.2:64747746-64747765 | MS.gene36908:CDS | 30.0% | |
| CATAGCTCATAACACTATTT+AGG | + | chr8.2:64746914-64746933 | None:intergenic | 30.0% | |
| CATTCTTTGTCAAAACAAAC+AGG | - | chr8.2:64745080-64745099 | MS.gene36908:CDS | 30.0% | |
| GAGAAAATAGCACAAACAAA+TGG | + | chr8.2:64746947-64746966 | None:intergenic | 30.0% | |
| GATTTAAATAGTGATACAGC+AGG | + | chr8.2:64747925-64747944 | None:intergenic | 30.0% | |
| GTCTGCAATATATATAACCA+AGG | + | chr8.2:64746863-64746882 | None:intergenic | 30.0% | |
| GTTATTGTAAGTCAAGCATT+CGG | - | chr8.2:64747230-64747249 | MS.gene36908:intron | 30.0% | |
| TAGTAGTACTGTCACTATAT+TGG | + | chr8.2:64746078-64746097 | None:intergenic | 30.0% | |
| TCAACAATGTGACTATATGT+TGG | - | chr8.2:64747745-64747764 | MS.gene36908:CDS | 30.0% | |
| TGATGGTTCTTTCATCATTA+TGG | - | chr8.2:64745616-64745635 | MS.gene36908:intron | 30.0% | |
| TTATTGTAAGTCAAGCATTC+GGG | - | chr8.2:64747231-64747250 | MS.gene36908:intron | 30.0% | |
| TTGTTCTAGTCTCACATATT+TGG | + | chr8.2:64747513-64747532 | None:intergenic | 30.0% | |
| TTTGTGCTCTCAATTTCAAT+TGG | + | chr8.2:64746178-64746197 | None:intergenic | 30.0% | |
| ! | AACATAAGCTCTGACAAAAA+TGG | - | chr8.2:64747181-64747200 | MS.gene36908:CDS | 30.0% |
| ! | ACATAAGCTCTGACAAAAAT+GGG | - | chr8.2:64747182-64747201 | MS.gene36908:CDS | 30.0% |
| ! | TGTGAGCTTTTATTACTACA+AGG | + | chr8.2:64746246-64746265 | None:intergenic | 30.0% |
| !! | ATCTGATTGATTTGTTCTAC+AGG | - | chr8.2:64747073-64747092 | MS.gene36908:intron | 30.0% |
| !! | TCAATGGTAAAGAGTGTTTA+CGG | + | chr8.2:64746277-64746296 | None:intergenic | 30.0% |
| !! | TCTGATTGATTTGTTCTACA+GGG | - | chr8.2:64747074-64747093 | MS.gene36908:intron | 30.0% |
| !!! | GTTTTTGCTAGTTTGTTAGA+GGG | - | chr8.2:64745544-64745563 | MS.gene36908:intron | 30.0% |
| !!! | TCATGTATTTTTTCCAGGTA+AGG | - | chr8.2:64745863-64745882 | MS.gene36908:CDS | 30.0% |
| !!! | TGTTTTTGCTAGTTTGTTAG+AGG | - | chr8.2:64745543-64745562 | MS.gene36908:intron | 30.0% |
| !!! | TTCTGCTGTTTTTCTTTTGA+TGG | - | chr8.2:64745126-64745145 | MS.gene36908:intron | 30.0% |
| AAAGACTTCAACTGATATGC+AGG | - | chr8.2:64747431-64747450 | MS.gene36908:intron | 35.0% | |
| AAATCAGCGAATGGAAAGAA+CGG | + | chr8.2:64746101-64746120 | None:intergenic | 35.0% | |
| AAATGGTCCTGTCACTATAT+TGG | + | chr8.2:64746035-64746054 | None:intergenic | 35.0% | |
| AACCCTCGGATCTAAATTAA+TGG | + | chr8.2:64746351-64746370 | None:intergenic | 35.0% | |
| AAGCACAAGTACTCGTAATT+CGG | + | chr8.2:64745695-64745714 | None:intergenic | 35.0% | |
| AATAGTGATACAGCAGGTAT+AGG | + | chr8.2:64747919-64747938 | None:intergenic | 35.0% | |
| AATTGCTAGGATTTGTAGGT+TGG | - | chr8.2:64745581-64745600 | MS.gene36908:intron | 35.0% | |
| AGCTTGCAACTAATACTTCT+AGG | + | chr8.2:64747457-64747476 | None:intergenic | 35.0% | |
| ATAACCAAAGTTAGTCCAGT+TGG | - | chr8.2:64745010-64745029 | MS.gene36908:CDS | 35.0% | |
| ATACACTAAAATCAGGTGCA+TGG | + | chr8.2:64746127-64746146 | None:intergenic | 35.0% | |
| ATGATGAAAGAACCATCAGA+CGG | + | chr8.2:64745614-64745633 | None:intergenic | 35.0% | |
| ATTTCCCAAGTTTACTGCAT+AGG | - | chr8.2:64746411-64746430 | MS.gene36908:intron | 35.0% | |
| CATTTGACCAATATAGTGAC+AGG | - | chr8.2:64746025-64746044 | MS.gene36908:intron | 35.0% | |
| CTGAAAGTTGAAACTCTATC+AGG | - | chr8.2:64745192-64745211 | MS.gene36908:intron | 35.0% | |
| GGAAAATCTAGTAAAGGCTT+TGG | - | chr8.2:64745780-64745799 | MS.gene36908:CDS | 35.0% | |
| GGTTGAGGTTAGTAATTGTT+TGG | - | chr8.2:64746367-64746386 | MS.gene36908:intron | 35.0% | |
| GTCAAAACAAACAGGTAGTA+TGG | - | chr8.2:64745088-64745107 | MS.gene36908:intron | 35.0% | |
| TACAATAACATACCTGCCAA+TGG | + | chr8.2:64745823-64745842 | None:intergenic | 35.0% | |
| TATGCAGTAAACTTGGGAAA+TGG | + | chr8.2:64746412-64746431 | None:intergenic | 35.0% | |
| TTACAAAAGACTTCCTTACC+TGG | + | chr8.2:64745879-64745898 | None:intergenic | 35.0% | |
| TTCAATAGATGGACACAATG+AGG | - | chr8.2:64747568-64747587 | MS.gene36908:intron | 35.0% | |
| TTGAATGTGACAACATGTCT+CGG | - | chr8.2:64745411-64745430 | MS.gene36908:intron | 35.0% | |
| TTGACTTACAATAACACGCT+GGG | + | chr8.2:64747225-64747244 | None:intergenic | 35.0% | |
| TTTCCCAAGTTTACTGCATA+GGG | - | chr8.2:64746412-64746431 | MS.gene36908:intron | 35.0% | |
| TTTCCCTATGCAGTAAACTT+GGG | + | chr8.2:64746418-64746437 | None:intergenic | 35.0% | |
| ! | AGGAGGCTATTATTTTCTTG+AGG | - | chr8.2:64746440-64746459 | MS.gene36908:intron | 35.0% |
| ! | ATATAGTGACAGGACCATTT+TGG | - | chr8.2:64746035-64746054 | MS.gene36908:intron | 35.0% |
| ! | ATGCTGTCTTGTTCAATAGA+TGG | - | chr8.2:64747557-64747576 | MS.gene36908:intron | 35.0% |
| ! | ATTTGAGATTTCGCCTGTTA+CGG | - | chr8.2:64746652-64746671 | MS.gene36908:intron | 35.0% |
| ! | CATAAGCTCTGACAAAAATG+GGG | - | chr8.2:64747183-64747202 | MS.gene36908:CDS | 35.0% |
| ! | TCAGACTGGATTCAGTTTTA+CGG | - | chr8.2:64745970-64745989 | MS.gene36908:intron | 35.0% |
| ! | TGAAACTCTATCAGGAGTAT+TGG | - | chr8.2:64745200-64745219 | MS.gene36908:intron | 35.0% |
| ! | TGAGCTATCTGTTGGTTATT+TGG | - | chr8.2:64745151-64745170 | MS.gene36908:intron | 35.0% |
| ! | TTTTCCCTATGCAGTAAACT+TGG | + | chr8.2:64746419-64746438 | None:intergenic | 35.0% |
| !! | AAATCGTAGAGTCTTATTGG+AGG | + | chr8.2:64747051-64747070 | None:intergenic | 35.0% |
| !! | AGACACTTGTTCTAGGATTA+AGG | + | chr8.2:64746531-64746550 | None:intergenic | 35.0% |
| !! | AGTTTGTTAGAGGGAAATTG+AGG | - | chr8.2:64745553-64745572 | MS.gene36908:intron | 35.0% |
| !! | GCTATTTTCTCATCGCAATT+TGG | - | chr8.2:64746956-64746975 | MS.gene36908:CDS | 35.0% |
| !! | TACCATCATATTTTGGACAC+TGG | - | chr8.2:64745441-64745460 | MS.gene36908:intron | 35.0% |
| !!! | TCAAACGGTCTCTTTTTTGT+TGG | + | chr8.2:64747319-64747338 | None:intergenic | 35.0% |
| !!! | TTCTTTCCATTCGCTGATTT+TGG | - | chr8.2:64746101-64746120 | MS.gene36908:intron | 35.0% |
| AATCGCTATGATACTGATGC+TGG | - | chr8.2:64745055-64745074 | MS.gene36908:CDS | 40.0% | |
| ACAAACACAGACACAAAAGC+TGG | - | chr8.2:64745338-64745357 | MS.gene36908:CDS | 40.0% | |
| ACACTATCGCTTCAGATTGA+AGG | + | chr8.2:64745472-64745491 | None:intergenic | 40.0% | |
| AGGCAGAATTTGGTATGTCT+TGG | - | chr8.2:64747588-64747607 | MS.gene36908:intron | 40.0% | |
| ATTCGGGACTGGATTATCTT+GGG | - | chr8.2:64747247-64747266 | MS.gene36908:intron | 40.0% | |
| CAATTACTAACCTCAACCCT+CGG | + | chr8.2:64746365-64746384 | None:intergenic | 40.0% | |
| CGAATTACAACCAAAGCTAG+AGG | + | chr8.2:64747484-64747503 | None:intergenic | 40.0% | |
| CTTGACTTACAATAACACGC+TGG | + | chr8.2:64747226-64747245 | None:intergenic | 40.0% | |
| GAAGACCAGGTATTTATCTG+TGG | + | chr8.2:64745952-64745971 | None:intergenic | 40.0% | |
| GGCCATTAATTTAGATCCGA+GGG | - | chr8.2:64746346-64746365 | MS.gene36908:intron | 40.0% | |
| GTAGTCAGTTGTGAAGGAAT+CGG | - | chr8.2:64745512-64745531 | MS.gene36908:intron | 40.0% | |
| GTCACATTGTTGAGCAAGAA+TGG | + | chr8.2:64747738-64747757 | None:intergenic | 40.0% | |
| GTCCAGTGTCCAAAATATGA+TGG | + | chr8.2:64745446-64745465 | None:intergenic | 40.0% | |
| GTCTCATAGACACTTGTTCT+AGG | + | chr8.2:64746538-64746557 | None:intergenic | 40.0% | |
| GTTTACTGCATAGGGAAAAC+AGG | - | chr8.2:64746420-64746439 | MS.gene36908:intron | 40.0% | |
| TAATTTAGATCCGAGGGTTG+AGG | - | chr8.2:64746352-64746371 | MS.gene36908:intron | 40.0% | |
| TAGTCAGTTGTGAAGGAATC+GGG | - | chr8.2:64745513-64745532 | MS.gene36908:intron | 40.0% | |
| TATTGGTCCATCGATGTTTG+AGG | - | chr8.2:64745217-64745236 | MS.gene36908:intron | 40.0% | |
| TTAGCAGTAGTCAGTTGTGA+AGG | - | chr8.2:64745506-64745525 | MS.gene36908:intron | 40.0% | |
| TTCGACGTTGAAAACACCAT+TGG | - | chr8.2:64745804-64745823 | MS.gene36908:CDS | 40.0% | |
| ! | ATAGAACCATGCTTGCTACA+TGG | - | chr8.2:64747142-64747161 | MS.gene36908:intron | 40.0% |
| ! | CATTACAATCTCTTTGGCTC+TGG | - | chr8.2:64747944-64747963 | MS.gene36908:CDS | 40.0% |
| ! | GGACACTATCTCTACCTTTT+TGG | - | chr8.2:64746800-64746819 | MS.gene36908:intron | 40.0% |
| ! | TAAATACCTGGTCTTCAGAC+TGG | - | chr8.2:64745956-64745975 | MS.gene36908:intron | 40.0% |
| ! | TTTTACGGAGAGCAGAGATT+AGG | - | chr8.2:64745985-64746004 | MS.gene36908:intron | 40.0% |
| !! | GACAGGACCATTTTGGAAAA+AGG | - | chr8.2:64746042-64746061 | MS.gene36908:intron | 40.0% |
| !! | TGGTTTGGTTCGGATCAATT+TGG | - | chr8.2:64747396-64747415 | MS.gene36908:intron | 40.0% |
| !! | TGTTTGGTTCTGTTACTGCA+GGG | - | chr8.2:64746383-64746402 | MS.gene36908:intron | 40.0% |
| !! | TTGTTTGGTTCTGTTACTGC+AGG | - | chr8.2:64746382-64746401 | MS.gene36908:intron | 40.0% |
| !!! | CGGGACGTTTTTTAAAACCT+TGG | - | chr8.2:64746843-64746862 | MS.gene36908:intron | 40.0% |
| !!! | CGGTCTCTTTTTTGTTGGTT+AGG | + | chr8.2:64747314-64747333 | None:intergenic | 40.0% |
| AAAGTTAGTCCAGTTGGAGG+TGG | - | chr8.2:64745016-64745035 | MS.gene36908:CDS | 45.0% | |
| AAATGGGGAGCCTGTCATAT+TGG | - | chr8.2:64747198-64747217 | MS.gene36908:CDS | 45.0% | |
| ACCAAAGTTAGTCCAGTTGG+AGG | - | chr8.2:64745013-64745032 | MS.gene36908:CDS | 45.0% | |
| ACCTCCAACTGGACTAACTT+TGG | + | chr8.2:64745017-64745036 | None:intergenic | 45.0% | |
| ACGTTGAAAACACCATTGGC+AGG | - | chr8.2:64745808-64745827 | MS.gene36908:CDS | 45.0% | |
| AGATCTCCATGTAGCAAGCA+TGG | + | chr8.2:64747151-64747170 | None:intergenic | 45.0% | |
| ATTAGGTTACCAGTTGCAGC+TGG | - | chr8.2:64746002-64746021 | MS.gene36908:intron | 45.0% | |
| CAAACCAACCAGCTCTTCAT+CGG | + | chr8.2:64747383-64747402 | None:intergenic | 45.0% | |
| CAGGTAATACCTAAACAGCC+AGG | - | chr8.2:64747875-64747894 | MS.gene36908:intron | 45.0% | |
| CATTCGGGACTGGATTATCT+TGG | - | chr8.2:64747246-64747265 | MS.gene36908:intron | 45.0% | |
| CGGCCATTAATTTAGATCCG+AGG | - | chr8.2:64746345-64746364 | MS.gene36908:intron | 45.0% | |
| CTGGCTGTTTAGGTATTACC+TGG | + | chr8.2:64747877-64747896 | None:intergenic | 45.0% | |
| CTTCCTTCCTAGAACAGACT+GGG | + | chr8.2:64745739-64745758 | None:intergenic | 45.0% | |
| GCACACCACAGATAAATACC+TGG | - | chr8.2:64745944-64745963 | MS.gene36908:intron | 45.0% | |
| GGACACAATGAGGCAGAATT+TGG | - | chr8.2:64747578-64747597 | MS.gene36908:intron | 45.0% | |
| TACTGCATAGGGAAAACAGG+AGG | - | chr8.2:64746423-64746442 | MS.gene36908:intron | 45.0% | |
| TAGGGGCTATGTATGAAACC+AGG | - | chr8.2:64745255-64745274 | MS.gene36908:intron | 45.0% | |
| TATCTTGGGGTGTAACGAGT+AGG | - | chr8.2:64747261-64747280 | MS.gene36908:intron | 45.0% | |
| TGAAAACGGTCGCACCAAAA+AGG | + | chr8.2:64746817-64746836 | None:intergenic | 45.0% | |
| TGATGACCATAGTCCGTAAC+AGG | + | chr8.2:64746668-64746687 | None:intergenic | 45.0% | |
| TTCGGGACTGGATTATCTTG+GGG | - | chr8.2:64747248-64747267 | MS.gene36908:intron | 45.0% | |
| TTCTCAAAGCCTGGCTGTTT+AGG | + | chr8.2:64747887-64747906 | None:intergenic | 45.0% | |
| TTGATACAACCACCTCCAAC+TGG | + | chr8.2:64745028-64745047 | None:intergenic | 45.0% | |
| TTGTTCTACAGGGCAGAGAT+TGG | - | chr8.2:64747084-64747103 | MS.gene36908:intron | 45.0% | |
| TTTCTCACCTTGTACGGCTT+AGG | + | chr8.2:64745293-64745312 | None:intergenic | 45.0% | |
| ! | ATTTCGCCTGTTACGGACTA+TGG | - | chr8.2:64746659-64746678 | MS.gene36908:intron | 45.0% |
| ! | ATTTGGCGGATCTAGAGATC+AGG | - | chr8.2:64745649-64745668 | MS.gene36908:intron | 45.0% |
| ! | CAAGCTAGAACCTCTAGCTT+TGG | - | chr8.2:64747471-64747490 | MS.gene36908:intron | 45.0% |
| ! | CTACATGGAGATCTTTGGAG+CGG | - | chr8.2:64747157-64747176 | MS.gene36908:CDS | 45.0% |
| ! | GCTTGCTACATGGAGATCTT+TGG | - | chr8.2:64747152-64747171 | MS.gene36908:CDS | 45.0% |
| ! | GGCGTAACAGTGTTTTATCG+CGG | - | chr8.2:64746729-64746748 | MS.gene36908:intron | 45.0% |
| ! | TGATGGTGTGAGCTATCTGT+TGG | - | chr8.2:64745143-64745162 | MS.gene36908:intron | 45.0% |
| ! | TTTGGTATGTCTTGGTGTGC+TGG | - | chr8.2:64747596-64747615 | MS.gene36908:intron | 45.0% |
| !! | AAGAGCTGGTTGGTTTGGTT+CGG | - | chr8.2:64747386-64747405 | MS.gene36908:intron | 45.0% |
| !! | GTAGAGTCTTATTGGAGGAG+AGG | + | chr8.2:64747046-64747065 | None:intergenic | 45.0% |
| !! | TGTTCTAGGAAGGAAGCTTG+CGG | - | chr8.2:64745743-64745762 | MS.gene36908:intron | 45.0% |
| !! | TTTTGGTGCGACCGTTTTCA+CGG | - | chr8.2:64746817-64746836 | MS.gene36908:intron | 45.0% |
| !!! | TTTTTTCGGCTGTTTCCTCG+CGG | - | chr8.2:64746708-64746727 | MS.gene36908:intron | 45.0% |
| AAGCCAAACCGATGAAGAGC+TGG | - | chr8.2:64747372-64747391 | MS.gene36908:intron | 50.0% | |
| ACGTCCCGTTACCGTGAAAA+CGG | + | chr8.2:64746831-64746850 | None:intergenic | 50.0% | |
| CAAACCGATGAAGAGCTGGT+TGG | - | chr8.2:64747376-64747395 | MS.gene36908:intron | 50.0% | |
| CTGAATCCAGTCTGAAGACC+AGG | + | chr8.2:64745965-64745984 | None:intergenic | 50.0% | |
| CTTGCGGAAATGCACAAGTC+TGG | - | chr8.2:64745759-64745778 | MS.gene36908:CDS | 50.0% | |
| CTTGCTTCCCAGTCTGTTCT+AGG | - | chr8.2:64745729-64745748 | MS.gene36908:intron | 50.0% | |
| GAGAGAATCCACTCACGAAC+CGG | + | chr8.2:64744971-64744990 | None:intergenic | 50.0% | |
| GCATGGCCAAAATCAGCGAA+TGG | + | chr8.2:64746110-64746129 | None:intergenic | 50.0% | |
| GCTTCCTTCCTAGAACAGAC+TGG | + | chr8.2:64745740-64745759 | None:intergenic | 50.0% | |
| GTAAGTCAAGCATTCGGGAC+TGG | - | chr8.2:64747236-64747255 | MS.gene36908:intron | 50.0% | |
| GTTGGATCACTACCGTCTGA+TGG | - | chr8.2:64745599-64745618 | MS.gene36908:intron | 50.0% | |
| TAAAACACTGTTACGCCGCG+AGG | + | chr8.2:64746726-64746745 | None:intergenic | 50.0% | |
| TCTCTCCTCTTCTCAAAGCC+TGG | + | chr8.2:64747896-64747915 | None:intergenic | 50.0% | |
| TGGGGTGTAACGAGTAGGTT+TGG | - | chr8.2:64747266-64747285 | MS.gene36908:intron | 50.0% | |
| TGGTCCATCGATGTTTGAGG+CGG | - | chr8.2:64745220-64745239 | MS.gene36908:intron | 50.0% | |
| TTCTACAGGGCAGAGATTGG+TGG | - | chr8.2:64747087-64747106 | MS.gene36908:intron | 50.0% | |
| ! | CAACCAGCTCTTCATCGGTT+TGG | + | chr8.2:64747378-64747397 | None:intergenic | 50.0% |
| ! | CGATGAAGAGCTGGTTGGTT+TGG | - | chr8.2:64747381-64747400 | MS.gene36908:intron | 50.0% |
| ! | CGTGAGTGGATTCTCTCTGA+AGG | - | chr8.2:64744974-64744993 | MS.gene36908:CDS | 50.0% |
| ! | TGCGACCGTTTTCACGGTAA+CGG | - | chr8.2:64746823-64746842 | MS.gene36908:intron | 50.0% |
| !! | AACAGCCAGGCTTTGAGAAG+AGG | - | chr8.2:64747888-64747907 | MS.gene36908:CDS | 50.0% |
| !! | AGCTCTTCATCGGTTTGGCT+TGG | + | chr8.2:64747373-64747392 | None:intergenic | 50.0% |
| !! | ATGTCTTGGTGTGCTGGCTT+TGG | - | chr8.2:64747602-64747621 | MS.gene36908:intron | 50.0% |
| !! | CTTCCCAGTCTGTTCTAGGA+AGG | - | chr8.2:64745733-64745752 | MS.gene36908:intron | 50.0% |
| AGGCGGAGGCTCTTGGTTTA+GGG | - | chr8.2:64745237-64745256 | MS.gene36908:intron | 55.0% | |
| CACGCTGGGTCCAATATGAC+AGG | + | chr8.2:64747211-64747230 | None:intergenic | 55.0% | |
| CCTTGTACGGCTTAGGCACA+CGG | + | chr8.2:64745286-64745305 | None:intergenic | 55.0% | |
| GGTCAAATGCCAGCTGCAAC+TGG | + | chr8.2:64746014-64746033 | None:intergenic | 55.0% | |
| ! | ATGTTTGAGGCGGAGGCTCT+TGG | - | chr8.2:64745230-64745249 | MS.gene36908:intron | 55.0% |
| ! | GCGACCGTTTTCACGGTAAC+GGG | - | chr8.2:64746824-64746843 | MS.gene36908:intron | 55.0% |
| ! | GTAAGGATCCGGTTCGTGAG+TGG | - | chr8.2:64744960-64744979 | MS.gene36908:CDS | 55.0% |
| ! | TCCATCGATGTTTGAGGCGG+AGG | - | chr8.2:64745223-64745242 | MS.gene36908:intron | 55.0% |
| !! | TCTTGGTGTGCTGGCTTTGG+AGG | - | chr8.2:64747605-64747624 | MS.gene36908:intron | 55.0% |
| CCGTGTGCCTAAGCCGTACA+AGG | - | chr8.2:64745283-64745302 | MS.gene36908:intron | 60.0% | |
| CTTAGGCACACGGATGGTCC+TGG | + | chr8.2:64745276-64745295 | None:intergenic | 60.0% | |
| GAGGCGGAGGCTCTTGGTTT+AGG | - | chr8.2:64745236-64745255 | MS.gene36908:intron | 60.0% | |
| GCCTCCGCCTCAAACATCGA+TGG | + | chr8.2:64745227-64745246 | None:intergenic | 60.0% | |
| GGCGGAGGCTCTTGGTTTAG+GGG | - | chr8.2:64745238-64745257 | MS.gene36908:intron | 60.0% | |
| GTACGGCTTAGGCACACGGA+TGG | + | chr8.2:64745282-64745301 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 64744956 | 64748024 | 64744956 | ID=MS.gene36908 |
| chr8.2 | mRNA | 64744956 | 64748024 | 64744956 | ID=MS.gene36908.t1;Parent=MS.gene36908 |
| chr8.2 | exon | 64747879 | 64748024 | 64747879 | ID=MS.gene36908.t1.exon1;Parent=MS.gene36908.t1 |
| chr8.2 | CDS | 64747879 | 64748024 | 64747879 | ID=cds.MS.gene36908.t1;Parent=MS.gene36908.t1 |
| chr8.2 | exon | 64747676 | 64747766 | 64747676 | ID=MS.gene36908.t1.exon2;Parent=MS.gene36908.t1 |
| chr8.2 | CDS | 64747676 | 64747766 | 64747676 | ID=cds.MS.gene36908.t1;Parent=MS.gene36908.t1 |
| chr8.2 | exon | 64747310 | 64747381 | 64747310 | ID=MS.gene36908.t1.exon3;Parent=MS.gene36908.t1 |
| chr8.2 | CDS | 64747310 | 64747381 | 64747310 | ID=cds.MS.gene36908.t1;Parent=MS.gene36908.t1 |
| chr8.2 | exon | 64747151 | 64747239 | 64747151 | ID=MS.gene36908.t1.exon4;Parent=MS.gene36908.t1 |
| chr8.2 | CDS | 64747151 | 64747239 | 64747151 | ID=cds.MS.gene36908.t1;Parent=MS.gene36908.t1 |
| chr8.2 | exon | 64746917 | 64747035 | 64746917 | ID=MS.gene36908.t1.exon5;Parent=MS.gene36908.t1 |
| chr8.2 | CDS | 64746917 | 64747035 | 64746917 | ID=cds.MS.gene36908.t1;Parent=MS.gene36908.t1 |
| chr8.2 | exon | 64745745 | 64745885 | 64745745 | ID=MS.gene36908.t1.exon6;Parent=MS.gene36908.t1 |
| chr8.2 | CDS | 64745745 | 64745885 | 64745745 | ID=cds.MS.gene36908.t1;Parent=MS.gene36908.t1 |
| chr8.2 | exon | 64745328 | 64745404 | 64745328 | ID=MS.gene36908.t1.exon7;Parent=MS.gene36908.t1 |
| chr8.2 | CDS | 64745328 | 64745404 | 64745328 | ID=cds.MS.gene36908.t1;Parent=MS.gene36908.t1 |
| chr8.2 | exon | 64744956 | 64745102 | 64744956 | ID=MS.gene36908.t1.exon8;Parent=MS.gene36908.t1 |
| chr8.2 | CDS | 64744956 | 64745102 | 64744956 | ID=cds.MS.gene36908.t1;Parent=MS.gene36908.t1 |
| Gene Sequence |
| Protein sequence |
