Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92746.t1 | XP_004500710.1 | 70.5 | 95 | 0 | 1 | 1 | 67 | 180 | 274 | 3.40E-25 | 123.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92746.t1 | O80360 | 67.4 | 95 | 3 | 1 | 1 | 67 | 165 | 259 | 5.9e-26 | 117.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92746.t1 | G7J8L6 | 70.5 | 95 | 0 | 1 | 1 | 67 | 178 | 272 | 2.4e-25 | 123.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene92746 | 0.864778 | 9.52E-65 | -1.69E-46 |
| MS.gene049171 | MS.gene92746 | 0.821016 | 5.05E-53 | -1.69E-46 |
| MS.gene049217 | MS.gene92746 | 0.832402 | 9.65E-56 | -1.69E-46 |
| MS.gene049222 | MS.gene92746 | 0.832977 | 6.95E-56 | -1.69E-46 |
| MS.gene049285 | MS.gene92746 | 0.834389 | 3.08E-56 | -1.69E-46 |
| MS.gene049320 | MS.gene92746 | 0.828307 | 9.67E-55 | -1.69E-46 |
| MS.gene049351 | MS.gene92746 | 0.836317 | 1.00E-56 | -1.69E-46 |
| MS.gene049356 | MS.gene92746 | 0.80023 | 1.59E-48 | -1.69E-46 |
| MS.gene049369 | MS.gene92746 | 0.823254 | 1.53E-53 | -1.69E-46 |
| MS.gene049396 | MS.gene92746 | 0.808404 | 3.15E-50 | -1.69E-46 |
| MS.gene049427 | MS.gene92746 | 0.884287 | 2.18E-71 | -1.69E-46 |
| MS.gene049488 | MS.gene92746 | 0.803417 | 3.52E-49 | -1.69E-46 |
| MS.gene049609 | MS.gene92746 | 0.900417 | 7.48E-78 | -1.69E-46 |
| MS.gene049633 | MS.gene92746 | 0.810408 | 1.17E-50 | -1.69E-46 |
| MS.gene049661 | MS.gene92746 | 0.837941 | 3.86E-57 | -1.69E-46 |
| MS.gene049662 | MS.gene92746 | 0.827894 | 1.22E-54 | -1.69E-46 |
| MS.gene049760 | MS.gene92746 | 0.809343 | 1.98E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene92746 | 0.898215 | 6.60E-77 | -1.69E-46 |
| MS.gene050076 | MS.gene92746 | 0.814697 | 1.35E-51 | -1.69E-46 |
| MS.gene050163 | MS.gene92746 | 0.828972 | 6.68E-55 | -1.69E-46 |
| MS.gene050301 | MS.gene92746 | 0.821109 | 4.81E-53 | -1.69E-46 |
| MS.gene050333 | MS.gene92746 | 0.817502 | 3.19E-52 | -1.69E-46 |
| MS.gene050397 | MS.gene92746 | 0.821984 | 3.02E-53 | -1.69E-46 |
| MS.gene050432 | MS.gene92746 | 0.832249 | 1.05E-55 | -1.69E-46 |
| MS.gene050464 | MS.gene92746 | 0.841339 | 5.05E-58 | -1.69E-46 |
| MS.gene050504 | MS.gene92746 | 0.800186 | 1.62E-48 | -1.69E-46 |
| MS.gene050518 | MS.gene92746 | 0.809418 | 1.91E-50 | -1.69E-46 |
| MS.gene050520 | MS.gene92746 | 0.806445 | 8.20E-50 | -1.69E-46 |
| MS.gene050529 | MS.gene92746 | 0.828985 | 6.63E-55 | -1.69E-46 |
| MS.gene050593 | MS.gene92746 | 0.901034 | 4.03E-78 | -1.69E-46 |
| MS.gene050670 | MS.gene92746 | 0.887973 | 8.91E-73 | -1.69E-46 |
| MS.gene050675 | MS.gene92746 | 0.825243 | 5.21E-54 | -1.69E-46 |
| MS.gene050686 | MS.gene92746 | 0.812979 | 3.23E-51 | -1.69E-46 |
| MS.gene050699 | MS.gene92746 | 0.826274 | 2.97E-54 | -1.69E-46 |
| MS.gene050747 | MS.gene92746 | 0.856705 | 2.68E-62 | -1.69E-46 |
| MS.gene050767 | MS.gene92746 | 0.85568 | 5.36E-62 | -1.69E-46 |
| MS.gene050770 | MS.gene92746 | 0.857439 | 1.63E-62 | -1.69E-46 |
| MS.gene050772 | MS.gene92746 | 0.89279 | 1.15E-74 | -1.69E-46 |
| MS.gene05080 | MS.gene92746 | 0.821452 | 4.01E-53 | -1.69E-46 |
| MS.gene050950 | MS.gene92746 | 0.858589 | 7.42E-63 | -1.69E-46 |
| MS.gene05100 | MS.gene92746 | 0.808961 | 2.39E-50 | -1.69E-46 |
| MS.gene05101 | MS.gene92746 | 0.858342 | 8.80E-63 | -1.69E-46 |
| MS.gene05105 | MS.gene92746 | 0.902645 | 7.84E-79 | -1.69E-46 |
| MS.gene051387 | MS.gene92746 | 0.890512 | 9.21E-74 | -1.69E-46 |
| MS.gene051525 | MS.gene92746 | 0.818373 | 2.03E-52 | -1.69E-46 |
| MS.gene051582 | MS.gene92746 | 0.814631 | 1.40E-51 | -1.69E-46 |
| MS.gene051666 | MS.gene92746 | 0.870392 | 1.51E-66 | -1.69E-46 |
| MS.gene051692 | MS.gene92746 | 0.829412 | 5.22E-55 | -1.69E-46 |
| MS.gene051694 | MS.gene92746 | 0.848098 | 7.61E-60 | -1.69E-46 |
| MS.gene051810 | MS.gene92746 | 0.81501 | 1.15E-51 | -1.69E-46 |
| MS.gene051858 | MS.gene92746 | 0.865457 | 5.82E-65 | -1.69E-46 |
| MS.gene051874 | MS.gene92746 | 0.802916 | 4.47E-49 | -1.69E-46 |
| MS.gene051877 | MS.gene92746 | 0.822404 | 2.41E-53 | -1.69E-46 |
| MS.gene052078 | MS.gene92746 | 0.831001 | 2.14E-55 | -1.69E-46 |
| MS.gene052188 | MS.gene92746 | 0.821292 | 4.36E-53 | -1.69E-46 |
| MS.gene052253 | MS.gene92746 | 0.826028 | 3.40E-54 | -1.69E-46 |
| MS.gene052271 | MS.gene92746 | 0.845146 | 4.87E-59 | -1.69E-46 |
| MS.gene052310 | MS.gene92746 | 0.877762 | 4.84E-69 | -1.69E-46 |
| MS.gene052322 | MS.gene92746 | 0.837275 | 5.72E-57 | -1.69E-46 |
| MS.gene052379 | MS.gene92746 | 0.839126 | 1.91E-57 | -1.69E-46 |
| MS.gene052421 | MS.gene92746 | 0.88895 | 3.75E-73 | -1.69E-46 |
| MS.gene052481 | MS.gene92746 | 0.86305 | 3.28E-64 | -1.69E-46 |
| MS.gene052484 | MS.gene92746 | 0.849796 | 2.57E-60 | -1.69E-46 |
| MS.gene052485 | MS.gene92746 | 0.835722 | 1.42E-56 | -1.69E-46 |
| MS.gene052501 | MS.gene92746 | 0.818952 | 1.50E-52 | -1.69E-46 |
| MS.gene052505 | MS.gene92746 | 0.833107 | 6.45E-56 | -1.69E-46 |
| MS.gene052615 | MS.gene92746 | 0.89522 | 1.18E-75 | -1.69E-46 |
| MS.gene052916 | MS.gene92746 | 0.839311 | 1.71E-57 | -1.69E-46 |
| MS.gene052982 | MS.gene92746 | 0.859472 | 4.04E-63 | -1.69E-46 |
| MS.gene053009 | MS.gene92746 | 0.848683 | 5.24E-60 | -1.69E-46 |
| MS.gene053103 | MS.gene92746 | 0.847337 | 1.23E-59 | -1.69E-46 |
| MS.gene053104 | MS.gene92746 | 0.846518 | 2.07E-59 | -1.69E-46 |
| MS.gene053107 | MS.gene92746 | 0.803444 | 3.48E-49 | -1.69E-46 |
| MS.gene053203 | MS.gene92746 | 0.812063 | 5.12E-51 | -1.69E-46 |
| MS.gene053207 | MS.gene92746 | 0.86154 | 9.55E-64 | -1.69E-46 |
| MS.gene053209 | MS.gene92746 | 0.834694 | 2.58E-56 | -1.69E-46 |
| MS.gene053213 | MS.gene92746 | 0.880933 | 3.65E-70 | -1.69E-46 |
| MS.gene053286 | MS.gene92746 | 0.867175 | 1.66E-65 | -1.69E-46 |
| MS.gene053322 | MS.gene92746 | 0.901182 | 3.47E-78 | -1.69E-46 |
| MS.gene053436 | MS.gene92746 | 0.822424 | 2.39E-53 | -1.69E-46 |
| MS.gene053449 | MS.gene92746 | 0.840479 | 8.48E-58 | -1.69E-46 |
| MS.gene053574 | MS.gene92746 | 0.874823 | 5.00E-68 | -1.69E-46 |
| MS.gene053579 | MS.gene92746 | 0.816445 | 5.51E-52 | -1.69E-46 |
| MS.gene053626 | MS.gene92746 | 0.813406 | 2.60E-51 | -1.69E-46 |
| MS.gene053632 | MS.gene92746 | 0.824859 | 6.42E-54 | -1.69E-46 |
| MS.gene053758 | MS.gene92746 | 0.823786 | 1.15E-53 | -1.69E-46 |
| MS.gene053813 | MS.gene92746 | 0.845434 | 4.07E-59 | -1.69E-46 |
| MS.gene053824 | MS.gene92746 | 0.816806 | 4.57E-52 | -1.69E-46 |
| MS.gene053912 | MS.gene92746 | 0.839324 | 1.70E-57 | -1.69E-46 |
| MS.gene053915 | MS.gene92746 | 0.80649 | 8.02E-50 | -1.69E-46 |
| MS.gene053916 | MS.gene92746 | 0.824709 | 6.97E-54 | -1.69E-46 |
| MS.gene054376 | MS.gene92746 | 0.861987 | 6.97E-64 | -1.69E-46 |
| MS.gene054408 | MS.gene92746 | 0.821356 | 4.22E-53 | -1.69E-46 |
| MS.gene054595 | MS.gene92746 | 0.811391 | 7.17E-51 | -1.69E-46 |
| MS.gene054600 | MS.gene92746 | 0.817444 | 3.29E-52 | -1.69E-46 |
| MS.gene054642 | MS.gene92746 | 0.849623 | 2.87E-60 | -1.69E-46 |
| MS.gene054802 | MS.gene92746 | 0.855203 | 7.39E-62 | -1.69E-46 |
| MS.gene054803 | MS.gene92746 | 0.84939 | 3.33E-60 | -1.69E-46 |
| MS.gene054804 | MS.gene92746 | 0.856269 | 3.61E-62 | -1.69E-46 |
| MS.gene054927 | MS.gene92746 | 0.842315 | 2.79E-58 | -1.69E-46 |
| MS.gene054955 | MS.gene92746 | 0.827996 | 1.15E-54 | -1.69E-46 |
| MS.gene05505 | MS.gene92746 | 0.888958 | 3.72E-73 | -1.69E-46 |
| MS.gene055116 | MS.gene92746 | 0.869231 | 3.62E-66 | -1.69E-46 |
| MS.gene055206 | MS.gene92746 | 0.844119 | 9.21E-59 | -1.69E-46 |
| MS.gene055224 | MS.gene92746 | 0.820585 | 6.35E-53 | -1.69E-46 |
| MS.gene055277 | MS.gene92746 | 0.844466 | 7.43E-59 | -1.69E-46 |
| MS.gene055289 | MS.gene92746 | 0.826323 | 2.89E-54 | -1.69E-46 |
| MS.gene055362 | MS.gene92746 | 0.824053 | 9.94E-54 | -1.69E-46 |
| MS.gene055397 | MS.gene92746 | 0.843783 | 1.13E-58 | -1.69E-46 |
| MS.gene055412 | MS.gene92746 | 0.8424 | 2.65E-58 | -1.69E-46 |
| MS.gene055422 | MS.gene92746 | 0.803638 | 3.17E-49 | -1.69E-46 |
| MS.gene055499 | MS.gene92746 | 0.863572 | 2.26E-64 | -1.69E-46 |
| MS.gene055502 | MS.gene92746 | 0.842359 | 2.71E-58 | -1.69E-46 |
| MS.gene055577 | MS.gene92746 | 0.823643 | 1.24E-53 | -1.69E-46 |
| MS.gene055647 | MS.gene92746 | 0.883816 | 3.26E-71 | -1.69E-46 |
| MS.gene055722 | MS.gene92746 | 0.883522 | 4.18E-71 | -1.69E-46 |
| MS.gene055909 | MS.gene92746 | 0.803905 | 2.79E-49 | -1.69E-46 |
| MS.gene055911 | MS.gene92746 | 0.810299 | 1.24E-50 | -1.69E-46 |
| MS.gene05592 | MS.gene92746 | 0.879234 | 1.47E-69 | -1.69E-46 |
| MS.gene055941 | MS.gene92746 | 0.848161 | 7.31E-60 | -1.69E-46 |
| MS.gene056083 | MS.gene92746 | 0.866641 | 2.46E-65 | -1.69E-46 |
| MS.gene056191 | MS.gene92746 | 0.842203 | 2.98E-58 | -1.69E-46 |
| MS.gene056374 | MS.gene92746 | 0.844781 | 6.11E-59 | -1.69E-46 |
| MS.gene056407 | MS.gene92746 | 0.837748 | 4.33E-57 | -1.69E-46 |
| MS.gene056410 | MS.gene92746 | 0.828485 | 8.76E-55 | -1.69E-46 |
| MS.gene056422 | MS.gene92746 | 0.826699 | 2.35E-54 | -1.69E-46 |
| MS.gene056448 | MS.gene92746 | 0.82174 | 3.44E-53 | -1.69E-46 |
| MS.gene056511 | MS.gene92746 | 0.868288 | 7.30E-66 | -1.69E-46 |
| MS.gene056549 | MS.gene92746 | 0.814512 | 1.48E-51 | -1.69E-46 |
| MS.gene056609 | MS.gene92746 | 0.830691 | 2.55E-55 | -1.69E-46 |
| MS.gene056657 | MS.gene92746 | 0.824116 | 9.61E-54 | -1.69E-46 |
| MS.gene056796 | MS.gene92746 | 0.821615 | 3.67E-53 | -1.69E-46 |
| MS.gene056877 | MS.gene92746 | 0.804545 | 2.05E-49 | -1.69E-46 |
| MS.gene056897 | MS.gene92746 | 0.832999 | 6.86E-56 | -1.69E-46 |
| MS.gene057011 | MS.gene92746 | 0.884121 | 2.51E-71 | -1.69E-46 |
| MS.gene05702 | MS.gene92746 | 0.800156 | 1.64E-48 | -1.69E-46 |
| MS.gene057076 | MS.gene92746 | 0.85611 | 4.01E-62 | -1.69E-46 |
| MS.gene057123 | MS.gene92746 | 0.830672 | 2.57E-55 | -1.69E-46 |
| MS.gene057124 | MS.gene92746 | 0.852582 | 4.20E-61 | -1.69E-46 |
| MS.gene057129 | MS.gene92746 | 0.872206 | 3.80E-67 | -1.69E-46 |
| MS.gene057146 | MS.gene92746 | 0.881982 | 1.53E-70 | -1.69E-46 |
| MS.gene057295 | MS.gene92746 | 0.807595 | 4.68E-50 | -1.69E-46 |
| MS.gene057331 | MS.gene92746 | 0.876289 | 1.57E-68 | -1.69E-46 |
| MS.gene057416 | MS.gene92746 | 0.90533 | 4.81E-80 | -1.69E-46 |
| MS.gene057734 | MS.gene92746 | 0.814102 | 1.83E-51 | -1.69E-46 |
| MS.gene057749 | MS.gene92746 | 0.831979 | 1.23E-55 | -1.69E-46 |
| MS.gene057775 | MS.gene92746 | 0.800605 | 1.33E-48 | -1.69E-46 |
| MS.gene057823 | MS.gene92746 | 0.831356 | 1.75E-55 | -1.69E-46 |
| MS.gene058006 | MS.gene92746 | 0.820892 | 5.40E-53 | -1.69E-46 |
| MS.gene058007 | MS.gene92746 | 0.803101 | 4.09E-49 | -1.69E-46 |
| MS.gene058019 | MS.gene92746 | 0.893794 | 4.51E-75 | -1.69E-46 |
| MS.gene058130 | MS.gene92746 | 0.851989 | 6.19E-61 | -1.69E-46 |
| MS.gene058233 | MS.gene92746 | 0.816162 | 6.37E-52 | -1.69E-46 |
| MS.gene058293 | MS.gene92746 | 0.859529 | 3.88E-63 | -1.69E-46 |
| MS.gene058323 | MS.gene92746 | 0.855603 | 5.65E-62 | -1.69E-46 |
| MS.gene05837 | MS.gene92746 | 0.835584 | 1.54E-56 | -1.69E-46 |
| MS.gene058419 | MS.gene92746 | 0.853541 | 2.23E-61 | -1.69E-46 |
| MS.gene058444 | MS.gene92746 | 0.804842 | 1.78E-49 | -1.69E-46 |
| MS.gene058544 | MS.gene92746 | 0.836302 | 1.01E-56 | -1.69E-46 |
| MS.gene058660 | MS.gene92746 | 0.8846 | 1.67E-71 | -1.69E-46 |
| MS.gene058700 | MS.gene92746 | 0.836201 | 1.07E-56 | -1.69E-46 |
| MS.gene058723 | MS.gene92746 | 0.810041 | 1.40E-50 | -1.69E-46 |
| MS.gene058773 | MS.gene92746 | 0.808361 | 3.22E-50 | -1.69E-46 |
| MS.gene058838 | MS.gene92746 | 0.818588 | 1.81E-52 | -1.69E-46 |
| MS.gene05883 | MS.gene92746 | 0.873185 | 1.79E-67 | -1.69E-46 |
| MS.gene05886 | MS.gene92746 | 0.822924 | 1.83E-53 | -1.69E-46 |
| MS.gene058928 | MS.gene92746 | 0.850151 | 2.04E-60 | -1.69E-46 |
| MS.gene058993 | MS.gene92746 | 0.821508 | 3.89E-53 | -1.69E-46 |
| MS.gene058995 | MS.gene92746 | 0.801001 | 1.11E-48 | -1.69E-46 |
| MS.gene059022 | MS.gene92746 | 0.806148 | 9.47E-50 | -1.69E-46 |
| MS.gene059023 | MS.gene92746 | 0.822112 | 2.82E-53 | -1.69E-46 |
| MS.gene059029 | MS.gene92746 | 0.827933 | 1.19E-54 | -1.69E-46 |
| MS.gene05907 | MS.gene92746 | 0.82952 | 4.92E-55 | -1.69E-46 |
| MS.gene059141 | MS.gene92746 | 0.82068 | 6.04E-53 | -1.69E-46 |
| MS.gene059326 | MS.gene92746 | 0.81977 | 9.75E-53 | -1.69E-46 |
| MS.gene05934 | MS.gene92746 | 0.84642 | 2.20E-59 | -1.69E-46 |
| MS.gene059366 | MS.gene92746 | 0.83086 | 2.32E-55 | -1.69E-46 |
| MS.gene059368 | MS.gene92746 | 0.816818 | 4.55E-52 | -1.69E-46 |
| MS.gene059455 | MS.gene92746 | 0.810182 | 1.31E-50 | -1.69E-46 |
| MS.gene059536 | MS.gene92746 | 0.921869 | 2.06E-88 | -1.69E-46 |
| MS.gene059597 | MS.gene92746 | 0.810337 | 1.21E-50 | -1.69E-46 |
| MS.gene059676 | MS.gene92746 | 0.85552 | 5.97E-62 | -1.69E-46 |
| MS.gene059677 | MS.gene92746 | 0.820665 | 6.08E-53 | -1.69E-46 |
| MS.gene059688 | MS.gene92746 | 0.885663 | 6.69E-72 | -1.69E-46 |
| MS.gene059692 | MS.gene92746 | 0.870007 | 2.02E-66 | -1.69E-46 |
| MS.gene059695 | MS.gene92746 | 0.874893 | 4.73E-68 | -1.69E-46 |
| MS.gene059711 | MS.gene92746 | 0.834686 | 2.60E-56 | -1.69E-46 |
| MS.gene059718 | MS.gene92746 | 0.865969 | 4.02E-65 | -1.69E-46 |
| MS.gene059756 | MS.gene92746 | 0.822058 | 2.90E-53 | -1.69E-46 |
| MS.gene059902 | MS.gene92746 | 0.868607 | 5.76E-66 | -1.69E-46 |
| MS.gene059960 | MS.gene92746 | 0.887518 | 1.33E-72 | -1.69E-46 |
| MS.gene060193 | MS.gene92746 | 0.833078 | 6.56E-56 | -1.69E-46 |
| MS.gene060403 | MS.gene92746 | 0.854622 | 1.09E-61 | -1.69E-46 |
| MS.gene060482 | MS.gene92746 | 0.834154 | 3.53E-56 | -1.69E-46 |
| MS.gene060762 | MS.gene92746 | 0.80096 | 1.13E-48 | -1.69E-46 |
| MS.gene060804 | MS.gene92746 | 0.875836 | 2.25E-68 | -1.69E-46 |
| MS.gene060818 | MS.gene92746 | 0.864025 | 1.64E-64 | -1.69E-46 |
| MS.gene060835 | MS.gene92746 | 0.870644 | 1.25E-66 | -1.69E-46 |
| MS.gene060837 | MS.gene92746 | 0.867034 | 1.84E-65 | -1.69E-46 |
| MS.gene06092 | MS.gene92746 | 0.860856 | 1.54E-63 | -1.69E-46 |
| MS.gene061041 | MS.gene92746 | 0.850845 | 1.30E-60 | -1.69E-46 |
| MS.gene061049 | MS.gene92746 | 0.80575 | 1.15E-49 | -1.69E-46 |
| MS.gene061051 | MS.gene92746 | -0.831237 | 1.87E-55 | -1.69E-46 |
| MS.gene061134 | MS.gene92746 | 0.815512 | 8.90E-52 | -1.69E-46 |
| MS.gene061150 | MS.gene92746 | 0.85828 | 9.18E-63 | -1.69E-46 |
| MS.gene061154 | MS.gene92746 | 0.837548 | 4.87E-57 | -1.69E-46 |
| MS.gene061171 | MS.gene92746 | 0.804303 | 2.30E-49 | -1.69E-46 |
| MS.gene061200 | MS.gene92746 | 0.892224 | 1.93E-74 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 25 sgRNAs with CRISPR-Local
Find 35 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGAGACTAATTAATTCTT+TGG | 0.209215 | 3.1:-92940527 | None:intergenic |
| ATGATCAAAGGTGCTCTTCC+TGG | 0.365904 | 3.1:+92940449 | MS.gene92746:intron |
| CTCTTGGAACCATGGCTCAT+TGG | 0.403785 | 3.1:-92940280 | None:intergenic |
| TCCAAGTTGTCTGTGACTCT+TGG | 0.442433 | 3.1:-92940296 | None:intergenic |
| TCCAAGAGTCACAGACAACT+TGG | 0.460086 | 3.1:+92940295 | MS.gene92746:CDS |
| TTCTTGCCAACAATCTTAGC+GGG | 0.460342 | 3.1:-92940500 | None:intergenic |
| TACACCTGGTCGCGTATACA+AGG | 0.469173 | 3.1:+92940336 | MS.gene92746:CDS |
| CACAGACAACTTGGATCCAT+TGG | 0.481197 | 3.1:+92940304 | MS.gene92746:CDS |
| TACGCGACCAGGTGTAGTTC+CGG | 0.494636 | 3.1:-92940329 | None:intergenic |
| TTTCCCTTGTATACGCGACC+AGG | 0.499382 | 3.1:-92940340 | None:intergenic |
| AGAAGATTACCAGGCTTACC+AGG | 0.500896 | 3.1:-92940467 | None:intergenic |
| GGTGCTCTTCCTGGTAAGCC+TGG | 0.514459 | 3.1:+92940458 | MS.gene92746:intron |
| AAGCGTCATAACTTCAAAAG+AGG | 0.517261 | 3.1:+92940256 | MS.gene92746:CDS |
| AGGTGTAGTTCCGGCACCAA+TGG | 0.518535 | 3.1:-92940320 | None:intergenic |
| GTAAGCCTGGTAATCTTCTA+CGG | 0.530779 | 3.1:+92940471 | MS.gene92746:CDS |
| TACAAGGGAAAGAAGATGCC+TGG | 0.536322 | 3.1:+92940352 | MS.gene92746:CDS |
| GTCTGTGACTCTTGGAACCA+TGG | 0.543733 | 3.1:-92940288 | None:intergenic |
| CAACTTGGATCCATTGGTGC+CGG | 0.569215 | 3.1:+92940310 | MS.gene92746:CDS |
| ATTGGTGCCGGAACTACACC+TGG | 0.580799 | 3.1:+92940322 | MS.gene92746:CDS |
| GTTCTTGCCAACAATCTTAG+CGG | 0.594511 | 3.1:-92940501 | None:intergenic |
| GCTATCCGTAGAAGATTACC+AGG | 0.602366 | 3.1:-92940476 | None:intergenic |
| TCTTGCCAACAATCTTAGCG+GGG | 0.638407 | 3.1:-92940499 | None:intergenic |
| AAAAGAGGACCAATGAGCCA+TGG | 0.640937 | 3.1:+92940271 | MS.gene92746:CDS |
| CTTGCCAACAATCTTAGCGG+GGG | 0.643846 | 3.1:-92940498 | None:intergenic |
| ACACCTGGTCGCGTATACAA+GGG | 0.687415 | 3.1:+92940337 | MS.gene92746:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | CTTAATGTTATCATGATCAA+AGG | + | chr3.1:92940437-92940456 | MS.gene92746:intron | 25.0% |
| TTAACAATCTTAAGCTTTCC+TGG | - | chr3.1:92940404-92940423 | None:intergenic | 30.0% | |
| AAGCGTCATAACTTCAAAAG+AGG | + | chr3.1:92940256-92940275 | MS.gene92746:CDS | 35.0% | |
| GTAAGCCTGGTAATCTTCTA+CGG | + | chr3.1:92940471-92940490 | MS.gene92746:CDS | 40.0% | |
| GTTCTTGCCAACAATCTTAG+CGG | - | chr3.1:92940504-92940523 | None:intergenic | 40.0% | |
| TTCTTGCCAACAATCTTAGC+GGG | - | chr3.1:92940503-92940522 | None:intergenic | 40.0% | |
| AAAAGAGGACCAATGAGCCA+TGG | + | chr3.1:92940271-92940290 | MS.gene92746:CDS | 45.0% | |
| AAAGAAGATGCCTGGTAGGA+TGG | + | chr3.1:92940360-92940379 | MS.gene92746:intron | 45.0% | |
| AAGAAGATGCCTGGTAGGAT+GGG | + | chr3.1:92940361-92940380 | MS.gene92746:intron | 45.0% | |
| AGAAGATTACCAGGCTTACC+AGG | - | chr3.1:92940470-92940489 | None:intergenic | 45.0% | |
| CACAGACAACTTGGATCCAT+TGG | + | chr3.1:92940304-92940323 | MS.gene92746:CDS | 45.0% | |
| GCTATCCGTAGAAGATTACC+AGG | - | chr3.1:92940479-92940498 | None:intergenic | 45.0% | |
| TACAAGGGAAAGAAGATGCC+TGG | + | chr3.1:92940352-92940371 | MS.gene92746:CDS | 45.0% | |
| TCCAAGAGTCACAGACAACT+TGG | + | chr3.1:92940295-92940314 | MS.gene92746:CDS | 45.0% | |
| TCCAAGTTGTCTGTGACTCT+TGG | - | chr3.1:92940299-92940318 | None:intergenic | 45.0% | |
| TCTTGCCAACAATCTTAGCG+GGG | - | chr3.1:92940502-92940521 | None:intergenic | 45.0% | |
| !! | ATGATCAAAGGTGCTCTTCC+TGG | + | chr3.1:92940449-92940468 | MS.gene92746:intron | 45.0% |
| ACACCTGGTCGCGTATACAA+GGG | + | chr3.1:92940337-92940356 | MS.gene92746:CDS | 50.0% | |
| AGGGAAAGAAGATGCCTGGT+AGG | + | chr3.1:92940356-92940375 | MS.gene92746:intron | 50.0% | |
| ATAGCCCCCGCTAAGATTGT+TGG | + | chr3.1:92940494-92940513 | MS.gene92746:CDS | 50.0% | |
| CAACTTGGATCCATTGGTGC+CGG | + | chr3.1:92940310-92940329 | MS.gene92746:CDS | 50.0% | |
| CTCTTGGAACCATGGCTCAT+TGG | - | chr3.1:92940283-92940302 | None:intergenic | 50.0% | |
| CTTGCCAACAATCTTAGCGG+GGG | - | chr3.1:92940501-92940520 | None:intergenic | 50.0% | |
| GTCTGTGACTCTTGGAACCA+TGG | - | chr3.1:92940291-92940310 | None:intergenic | 50.0% | |
| TACACCTGGTCGCGTATACA+AGG | + | chr3.1:92940336-92940355 | MS.gene92746:CDS | 50.0% | |
| TTTCCCTTGTATACGCGACC+AGG | - | chr3.1:92940343-92940362 | None:intergenic | 50.0% | |
| ! | AGCTTTCCTGGTCTTCCTGT+TGG | - | chr3.1:92940392-92940411 | None:intergenic | 50.0% |
| AAGATGCCTGGTAGGATGGG+TGG | + | chr3.1:92940364-92940383 | MS.gene92746:intron | 55.0% | |
| AGGTGTAGTTCCGGCACCAA+TGG | - | chr3.1:92940323-92940342 | None:intergenic | 55.0% | |
| GTAGGATGGGTGGAACCAAC+AGG | + | chr3.1:92940374-92940393 | MS.gene92746:intron | 55.0% | |
| GTGGAACCAACAGGAAGACC+AGG | + | chr3.1:92940383-92940402 | MS.gene92746:intron | 55.0% | |
| TACGCGACCAGGTGTAGTTC+CGG | - | chr3.1:92940332-92940351 | None:intergenic | 55.0% | |
| TTGGTTCCACCCATCCTACC+AGG | - | chr3.1:92940373-92940392 | None:intergenic | 55.0% | |
| !! | ATTGGTGCCGGAACTACACC+TGG | + | chr3.1:92940322-92940341 | MS.gene92746:CDS | 55.0% |
| GGTGCTCTTCCTGGTAAGCC+TGG | + | chr3.1:92940458-92940477 | MS.gene92746:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 92940248 | 92940538 | 92940248 | ID=MS.gene92746 |
| chr3.1 | mRNA | 92940248 | 92940538 | 92940248 | ID=MS.gene92746.t1;Parent=MS.gene92746 |
| chr3.1 | exon | 92940248 | 92940373 | 92940248 | ID=MS.gene92746.t1.exon1;Parent=MS.gene92746.t1 |
| chr3.1 | CDS | 92940248 | 92940373 | 92940248 | ID=cds.MS.gene92746.t1;Parent=MS.gene92746.t1 |
| chr3.1 | exon | 92940459 | 92940538 | 92940459 | ID=MS.gene92746.t1.exon2;Parent=MS.gene92746.t1 |
| chr3.1 | CDS | 92940459 | 92940538 | 92940459 | ID=cds.MS.gene92746.t1;Parent=MS.gene92746.t1 |
| Gene Sequence |
| Protein sequence |
